CmoCh20G009090 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G009090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	F-box only 46
Location	Cmo_Chr20 : 4635583 .. 4640739 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAGGAACATCGAATTTGTGTAACATCGAAATGGAAAAACAGAGGGAGAAGGCTAAATCTGAAGAAATGGAGAAGCTCTGCCGAAGATGTAATCGGTCCTATCTTCCATCCTCCAATTCATCTTCTTCATGCCGTTTCCATCCTTCGTTTTTCGTCTGTCGCCGCCATGACGACCAGAAGAGGTAACCTAGAATCTTCCCCATCATTCATCCACTATTGAATCATACTCGTTCCTCCTTGGGAACCCTTTCAATTGCTCTTGCTTGAGTTTTTGAGTCATTCTCCTTGCTTTTTTGAAGTGATTAACTGAATCTTAGTGTTGAAATAAGTCATTACTGGCAGGGAGAGATTTTGAAGCCAGTGGGTTATAACTACAATCGGGCATTTTTGCTTTTGAATCTTATGGTTTTAGTGTAGTTATTGTACTTGGTGATTGTTAAGTTTAGTTTTGGTGTAATGATTGTTTGGATCTTTTGGCAGAAAAAAAAGAAAAAAAAAAAAAGAGAGGAGAAGTAATTGGCTTTTGGCGCTAGGATTAACGGGATAGATGATTTCAAGTTCTGTATGATACGAGATAAAGGAATTTATGTTTGCACCATAGTTTGCATTAGAGCTTTACAGTTTAATAAACAAATTATGATCTTTTTATCCTCTCTCTCTCTATTGAAGGGATGTGATCTTAAATCTTGAATTTGTATCTAAAACCATTCTTTATGTAGCTGCTGATCTGCAATTGGCTGTGTGACTGAAATGCTGCTTTCTTTTGTTTCGTTTCCATAATTTAAGAGCTTACCACATGATCATTTACATCTGAATAATTTCAAATGGTGCAAAACATCACTTTATCCAGTTAAACCATAGGATACAAGAATAAGAGAAACTGTTTCATTTCCATGTTTGAATGTTGATATTGTAAACTCTGCTTCTGGATTCATGAAATTTTCTGTGCTGTTTCTAAGATTGAAGTCATTGCAATTCCTCCATGTAAAACGCAGTATAATACAGAGGGAATATAAAACGCCCTCCAGAAGCCTCCTAGTAGCTCATGGTTCCAACTACAATATTGATAGTCGGGGAGTATTTGCAACAAATGTTAGAAAGCAAGCCAGGTGCAATCCGTAAAGCAAACCCCTTCTGAACGATATCGAGTAAATGCTCACTCGGAAGGGGTTTGTTTTACCGATTCCACGTGGGCTCGCTTTCTAAATTTGTTGCTATTACTTCCCCACATGATTGTAGAAAATACTCCCCAATTATTGATCTTGCTCGTTGGCTTTGTATAGTCTTTGAGTACCTGATTATTGGGGAAGTTCTTCTGTTAAGTAACTCAAGAAAGGGTCGCCCCTCTATTGTGGACCTATGATTTGGGGAAGAAACTGCGAAGTGTAAGATTTCTTAGCTTAGGGTCAATCCAGAATTTTGTAGATTCTCCATTTCCTTCCCCGCACCTTATTTTTGTGACAAAATATCCTTGCACTTGACATTCCATACTAGGGGCTCCTTGTAGAAAGAACGTCTGGCTTTATACCAATTCAAGGCTAAGAAAAGAAAACAAATCTTCTCTCTTTAAATTTTCTGATTCTACTTCACATTTTTCACTTGTCTGCTTCATTTTCTCTCCTGCATTACGTGGAAGTTTGAATAAATTTGACAAACATGTCTATACATCAAGCTTTGTAGTTAAGCTCAACTTCATTAGGTAGAATTATTTCCCTGCATTCTTTGCCTCAAACTATTGAACAAAATAAAATCCAAATTTTTGATGTTGACCTATCGGTTAACACAAACGTTGAGAATAGTCCAATATTCGAGCAATGCAGGAAAGCATTGTAGATTGATATCCCTGCACTGTCACATGGCCTATCTTTGTGGAAGGGCACATGGAATTGTTTCCCTGCTCAGCAGAATATTATTTACATCGATTTTGCAATAAGTGTCACTCCCTAGGAAAGATGTAGACTGCCTTTCTCCCCTCAAAATCATAACCTGCCAAATGTTCTTATGAGATAGGAAAGAAGAATGCAGAGGTAAGATCGAGTACAAAATATTCAAAAGCATCATCTTCCAGTTAGTTTTATCTAAAGTGAACCCTCTCTATGGTACTCTATGGTAATCTTTTAAAAGGTAGAAAAAAAAAGAAATGGAAAAAATTAGTGGTAAAAATCAATTCATACCCCTAAAGTGTTGGGGCTGTATCACTTTAAACCCTAAACTAGTAATTGTATAAATCAAATCCTAGCCTTTCAGTAGTAAGTTAATTTAGACCGGGTTAGGATTCCATTTTAAAACCATTTTAACACGTGCATAAATGTCTTCTTTAAATGCCTGAATTAACGTAGTATTAGAAAAGTACGTTGCAATTAAATGAATAGTAGTAGTTTTCATTAGCATGAGTAATTTTTTATTTTCTCCCCTTCCTCTATTTTTCTTGACTTACTCAAGAAAAATCATGTCATAATTTTTTTTTTTGTTAATTTGGTAGAATTTTGGGAGAAAATAATTTTATTAGGTGATTTCAAAGTTCATTTTAAATGTACGTGGAAATAGTTATCATTCACTAACAGAGGGTCTAGATTGATTTACGCATGAAAGTTTAGAGTTTAAATTGATACCATTATTAATTTAAAGTTTTAATTGATACAAACTCAAAGTTTAGGCTTATAAATTGGTTTTTGTCCTAAAAAATTATGATGAAGTTTATGCCAGCAGAACTAATAAAATTTTCTATCGAGTTTGAAGAAAATGTAAAATTTTGTCATTAAATACGGTTGAAAATGGAGATGAAACAATAGCCAGTGAATTGAAAGGAGCTTCACTACACTAATTGCCCTCCAAGAGCACTGCTACTGAACATTTGATGACATTGGAGAAATAGGAAACACTTAAAGAAATTTATTTCCAAGGGTGTCTACAATACCCTCTGATTGCCGAAAAAGAACTGTATTCATTGTTGTGTAATTCACGCTTGCTTTCCATGGTTGAATTCAATTGCACAAGTTTTATTTCCCATATATGCAACTTCATGTATCATATTGAATATTTATGTCAACTGGATGGCTCCGGAAGTGGGGGAAGTTCCTCATGCCAACAACCATAAACGTGAGCCACTTGGACGAATCATCCACAAGTTGAGGAACATTGTAAGAAGAGGGAAGGGGCTTTTACATTATATGTTTTTGTTTCAAATTACTTGTGCTTTTATCCACTTATCTTTACTAAGTGATGTTAATAGTTAATGCGATCCAATAGATGGTTATTACGTAGTGATCGCTAGACACTTTGAAGTTCTGTAACCAAGCTTAATCATACTTGTGACAATACGGAGTGGTGGTGATGGAAATCACCACATGATTGGCTTGCATTGGTTTTGAGTTCTAGGATAACACTGAATTTGATGGAATGATGGATATTATGTCACCTGAATGTTCATGTCTGGTGTGAAATTAACTTTTATTTAGTTAAAAGTCAAAAGTTGTTTGAAAAACCCATCAAACTAATTGTAGTTGAAATAACTCGATGATTCTGTTTGATAACCCATTAAACTAAGAAGCACTTGGACAAATGTGATTAGATCTGGCTCAAGTTTTGGAAAGTTGTCTCAATGCCCTTTCATTTGGGTTCTTTTTTGTTTGTCTGTCTGTCTGGCTGGCTTGATTAAAATTAAGTATCAATTTTATGATCCATTCCAGTTTGTAAAGGGGTTAAGCCAGGTCAATTGATTGTTGCTCATGACAAGGTAAGGAAATTCCTACTTTGCCCGCACTTTGTTCTCAGACTATTCCCGGTAGAATAAAGTCTCTGTAGTCCTGAGTACGTGGATACTCATTCTAAATCACATGGGAGTCTGTAGTTTGGTTACCGGCCATCTCACTTTTGCCCCCACTCTAATTTTCCCGTCTCTACCAGAAACTGTGCAAGGGAAGTGTTTGAGTTCCCTTGACGAGACAGACGAAGTGTGGGGCTGTGCATCCGATGCTCCGGTTTAACTTGCTAGCCTAACCACGTCTCGAGTTTTGTTTAGTCTCGAAAAAAAAAATGATTAAAGATGTGGGTACATTAGAGATTAAAAGGTCCCCGAAAAAAATATTTGATGTAGTAGTGGACTGGAGTGGTGTGGGATGCGTCCACAAGTGACACTTCTGTCCTAGTTTGTCTTTTACTCCTCGTCTCTTCTTTCTCTTCTGGGTTGGCAGATCGTGCAAGTTCGAAATCATATTTATGCATGTATTTTCAATTTAAACATACTTCAGCTGATTAAATCGTATGTTTTGGTCTAGAGATTTAAATCTCGCAGCTACATATGTTGTTGAAGTCAAAATACTTGGGCACACATATATATTCTCTGGAATATATATTAAAAAAAAAAAACTGCATTGATATTGATAAGGAATTACACTGTAACAAGCGTTGAATGAATGATCTTCTTTTTTCCTATTGAATCTGCTCTCTTGATTTGGCAGTCTGATATTTTCAGTTGATTGATTCAAGGTACTATGAATTGGGACCCAACGACCCGCCTTATGCAGCCAAATTCTACGACTGCTGTGGGGCTGAGGACGCCGAGGCGTCAGGCTGCACCACCAGCTTCCATGTTTCTTATGATGAATGATCATAACAACAATATCTGAAGCTCTTTTTCACTCAGGTCTTGTGCTTCGCACATTCTGTAGATATAATCTCACCACATCATCTGCCAAACAAGGTTCATCTCATCCCTTTTATGATTAAAGCTTCTGAATCACTTTGAGTTCTGTGTTGTGTTTGTAGAGAAGACTCAATGAAACATAACATGATTAGTTTCTGAAGAATGAGTTCAGACAAAGTTACTGTAGTTTTTCATTAGAAAACTATTTCTTGTAAAAAGTTGTTTTTGGTTTCATTTATTTTGTCTTACAGTGGCTGTAAAGTGTGTTCTGATTCTGGGACAGATAAGATTATGTCCGTTTCTCTTGGGACCTTAGGGAGAGATTAGAGAGAGAGAGTAAAAACAAATGGGTGGTGAGGGATTCACGTGTAGGGTTGAACATTATGGTAATGAACTGCAGAAAGATACGGTGGTTGCAGACTACAGAGTCTTCAAATATTGTCTCTATAGGCTTTCTCTTTCGAGTTTTCTCCCAAGGTTTTAAAATGTGTCTACTACATAGAGGTTTCC

mRNA sequence

TTTGAGGAACATCGAATTTGTGTAACATCGAAATGGAAAAACAGAGGGAGAAGGCTAAATCTGAAGAAATGGAGAAGCTCTGCCGAAGATGTAATCGGTCCTATCTTCCATCCTCCAATTCATCTTCTTCATGCCGTTTCCATCCTTCGTTTTTCGTCTGTCGCCGCCATGACGACCAGAAGAGGTACTATGAATTGGGACCCAACGACCCGCCTTATGCAGCCAAATTCTACGACTGCTGTGGGGCTGAGGACGCCGAGGCGTCAGGCTGCACCACCAGCTTCCATGTTTCTTATGATGAATGATCATAACAACAATATCTGAAGCTCTTTTTCACTCAGGTCTTGTGCTTCGCACATTCTGTAGATATAATCTCACCACATCATCTGCCAAACAAGGTTCATCTCATCCCTTTTATGATTAAAGCTTCTGAATCACTTTGAGTTCTGTGTTGTGTTTGTAGAGAAGACTCAATGAAACATAACATGATTAGTTTCTGAAGAATGAGTTCAGACAAAGTTACTGTAGTTTTTCATTAGAAAACTATTTCTTGTAAAAAGTTGTTTTTGGTTTCATTTATTTTGTCTTACAGTGGCTGTAAAGTGTGTTCTGATTCTGGGACAGATAAGATTATGTCCGTTTCTCTTGGGACCTTAGGGAGAGATTAGAGAGAGAGAGTAAAAACAAATGGGTGGTGAGGGATTCACGTGTAGGGTTGAACATTATGGTAATGAACTGCAGAAAGATACGGTGGTTGCAGACTACAGAGTCTTCAAATATTGTCTCTATAGGCTTTCTCTTTCGAGTTTTCTCCCAAGGTTTTAAAATGTGTCTACTACATAGAGGTTTCC

Coding sequence (CDS)

ATGGAAAAACAGAGGGAGAAGGCTAAATCTGAAGAAATGGAGAAGCTCTGCCGAAGATGTAATCGGTCCTATCTTCCATCCTCCAATTCATCTTCTTCATGCCGTTTCCATCCTTCGTTTTTCGTCTGTCGCCGCCATGACGACCAGAAGAGGTACTATGAATTGGGACCCAACGACCCGCCTTATGCAGCCAAATTCTACGACTGCTGTGGGGCTGAGGACGCCGAGGCGTCAGGCTGCACCACCAGCTTCCATGTTTCTTATGATGAATGA

Homology

[Close]

BLAST of CmoCh20G009090 vs. TrEMBL
Match: V4VE51_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033194mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.4e-36
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 1


Query: 4  QREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDPPYA 63
          + EK K +E EK+C+RC ++Y  SSNSSSSCRFHPSFFVCRRHDDQKRYYELGP+DPPYA
Sbjct: 2  ETEKVKEKEKEKVCKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYA 61

Query: 64 AKFYDCCGAEDAEASGCTTSFHVSYDE 91
          AKFYDCCGAEDA+ASGCTT FHVSYD+
Sbjct: 62 AKFYDCCGAEDADASGCTTGFHVSYDD 88

[Close]

BLAST of CmoCh20G009090 vs. TrEMBL
Match: A0A0L9V941_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g200100 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 9.8e-36
Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1


Query: 1  MEKQREKAKSEEM----EKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELG 60
          MEK++EK K +E+     K+C+RC +SY P+SN+SSSCRFH SFFVCRRHDDQKRYYELG
Sbjct: 1  MEKEKEKQKQKELIFSNSKVCKRCKQSYDPNSNTSSSCRFHTSFFVCRRHDDQKRYYELG 60

Query: 61 PNDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
          P+DPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Sbjct: 61 PDDPPYAAKFYDCCGAEDPEASGCTTSFHVSYDE 94

[Close]

BLAST of CmoCh20G009090 vs. TrEMBL
Match: A0A0S3SEE9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G252600 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 9.8e-36
Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1


Query: 1  MEKQREKAKSEEM----EKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELG 60
          MEK++EK K +E+     K+C+RC +SY P+SN+SSSCRFH SFFVCRRHDDQKRYYELG
Sbjct: 1  MEKEKEKQKQKELIFSNSKVCKRCKQSYDPNSNTSSSCRFHTSFFVCRRHDDQKRYYELG 60

Query: 61 PNDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
          P+DPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Sbjct: 61 PDDPPYAAKFYDCCGAEDPEASGCTTSFHVSYDE 94

[Close]

BLAST of CmoCh20G009090 vs. TrEMBL
Match: A0A067E1Y6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034621mg PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.8e-35
Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 1


Query: 4  QREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDPPYA 63
          + EK K +E EK+C+RC ++Y  SSNSSSSCRFHPSFFVCRRHDDQKRYYELGP+DPPYA
Sbjct: 2  ETEKIKDKEKEKVCKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYA 61

Query: 64 AKFYDCCGAEDAEASGCTTSFHVSYDE 91
          AKFYDCCGAEDA+ASGC T FHVSYD+
Sbjct: 62 AKFYDCCGAEDADASGCITGFHVSYDD 88

[Close]

BLAST of CmoCh20G009090 vs. TrEMBL
Match: F6HED9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01640 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-35
Identity = 72/90 (80.00%), Postives = 78/90 (86.67%), Query Frame = 1


Query: 1  MEKQREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDP 60
          ME+  E+ + E   KLC+RC + Y PSSN SSSCRFHPSFFVCRRHDDQKRYYELGPNDP
Sbjct: 1  MERAGEEGREE---KLCKRCQQMYSPSSNDSSSCRFHPSFFVCRRHDDQKRYYELGPNDP 60

Query: 61 PYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
          PYAAKFYDCCGAED EASGCTTSFHVSYD+
Sbjct: 61 PYAAKFYDCCGAEDPEASGCTTSFHVSYDD 87

[Close]

BLAST of CmoCh20G009090 vs. TAIR10
Match: AT1G65000.1 (AT1G65000.1 unknown protein)

HSP 1 Score: 139.8 bits (351), Expect = 8.2e-34
Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 1


Query: 9  KSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDPPYAAKFYD 68
          + +EMEKLC+RC +SY   SN +SSCRFHPSFFVCRRHDDQKRYYEL P+DPPYAAKFYD
Sbjct: 2  EKKEMEKLCQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYELKPDDPPYAAKFYD 61

Query: 69 CCGAEDAEASGCTTSFHVSYDE 91
          CCGAED  A GC T+ H+SYD+
Sbjct: 62 CCGAEDPNAPGCVTNPHISYDD 83

[Close]

BLAST of CmoCh20G009090 vs. TAIR10
Match: AT5G38060.1 (AT5G38060.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 5.9e-08
Identity = 27/79 (34.18%), Postives = 40/79 (50.63%), Query Frame = 1


Query: 15  KLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDPPYAAK---FYDCCG 74
           + C+ C   + P  N+  +CRFH + F        +  Y  G  D P + K   ++ CCG
Sbjct: 56  RTCKNCKTQFDPLLNNPRACRFHTAHFGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCG 115

Query: 75  AEDAEASGCTTSFHVSYDE 91
           +ED   SGCT S H +YD+
Sbjct: 116 SEDPFDSGCTASPHTTYDD 134

[Close]

BLAST of CmoCh20G009090 vs. NCBI nr
Match: gi|659118523|ref|XP_008459165.1| (PREDICTED: uncharacterized protein LOC103498365 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 2.9e-41
Identity = 82/90 (91.11%), Postives = 83/90 (92.22%), Query Frame = 1


Query: 1   MEKQREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDP 60
           M+KQ E  K EEMEKLCR CNR YLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDP
Sbjct: 11  MKKQSESGKCEEMEKLCRICNRPYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDP 70

Query: 61  PYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
           PYAAKFYDCCGAED EASGCTTSFHVSYDE
Sbjct: 71  PYAAKFYDCCGAEDVEASGCTTSFHVSYDE 100

[Close]

BLAST of CmoCh20G009090 vs. NCBI nr
Match: gi|449460692|ref|XP_004148079.1| (PREDICTED: uncharacterized protein LOC101216981 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 5.5e-40
Identity = 80/90 (88.89%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 1  MEKQREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDP 60
          M KQ E  K EEMEKLCR CNR YLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGP+DP
Sbjct: 1  MTKQSESGKCEEMEKLCRICNRPYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDP 60

Query: 61 PYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
          PYAAKFYDCCGAED EASGCTT FHVSYDE
Sbjct: 61 PYAAKFYDCCGAEDVEASGCTTGFHVSYDE 90

[Close]

BLAST of CmoCh20G009090 vs. NCBI nr
Match: gi|645257722|ref|XP_008234541.1| (PREDICTED: uncharacterized protein LOC103333479 [Prunus mume])

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-36
Identity = 73/90 (81.11%), Postives = 81/90 (90.00%), Query Frame = 1


Query: 1  MEKQREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDP 60
          MEK+RE ++ + M +LCRRC RSY P+SN+ SSCRFHPSFFVCRRHDDQKRYYELGP DP
Sbjct: 1  MEKKRE-SEEDNMGRLCRRCKRSYSPASNTPSSCRFHPSFFVCRRHDDQKRYYELGPKDP 60

Query: 61 PYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
          PYAAKFYDCCGAED EASGCTTSFHVSYD+
Sbjct: 61 PYAAKFYDCCGAEDPEASGCTTSFHVSYDD 89

[Close]

BLAST of CmoCh20G009090 vs. NCBI nr
Match: gi|950938682|ref|XP_014523383.1| (PREDICTED: uncharacterized protein LOC106779717 [Vigna radiata var. radiata])

HSP 1 Score: 158.3 bits (399), Expect = 6.3e-36
Identity = 74/94 (78.72%), Postives = 83/94 (88.30%), Query Frame = 1


Query: 1  MEKQREKAKSEEM----EKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELG 60
          MEK++EK K +E+     K+C+RC +SY P+SNSSSSCRFH SFFVCRRHDDQKRYYELG
Sbjct: 1  MEKEKEKKKQKELIFSNSKVCKRCKQSYDPNSNSSSSCRFHTSFFVCRRHDDQKRYYELG 60

Query: 61 PNDPPYAAKFYDCCGAEDAEASGCTTSFHVSYDE 91
          P+DPPYAAKFYDCCGAED EASGCTTSFHVSYDE
Sbjct: 61 PDDPPYAAKFYDCCGAEDPEASGCTTSFHVSYDE 94

[Close]

BLAST of CmoCh20G009090 vs. NCBI nr
Match: gi|567889847|ref|XP_006437444.1| (hypothetical protein CICLE_v10033194mg [Citrus clementina])

HSP 1 Score: 158.3 bits (399), Expect = 6.3e-36
Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 1


Query: 4  QREKAKSEEMEKLCRRCNRSYLPSSNSSSSCRFHPSFFVCRRHDDQKRYYELGPNDPPYA 63
          + EK K +E EK+C+RC ++Y  SSNSSSSCRFHPSFFVCRRHDDQKRYYELGP+DPPYA
Sbjct: 2  ETEKVKEKEKEKVCKRCKQTYTASSNSSSSCRFHPSFFVCRRHDDQKRYYELGPDDPPYA 61

Query: 64 AKFYDCCGAEDAEASGCTTSFHVSYDE 91
          AKFYDCCGAEDA+ASGCTT FHVSYD+
Sbjct: 62 AKFYDCCGAEDADASGCTTGFHVSYDD 88

The following BLAST results are available for this feature:

BLAST of CmoCh20G009090 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh20G009090 vs. TrEMBL


Match Name	E-value	Identity	Description
V4VE51_9ROSI	4.4e-36	80.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033194mg PE=4 SV=1	[more]
A0A0L9V941_PHAAN	9.8e-36	77.66	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g200100 PE=4 SV=1	[more]
A0A0S3SEE9_PHAAN	9.8e-36	77.66	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G252600 PE=...	[more]
A0A067E1Y6_CITSI	2.8e-35	79.31	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034621mg PE=4 SV=1	[more]
F6HED9_VITVI	3.7e-35	80.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01640 PE=4 SV=...	[more]

BLAST of CmoCh20G009090 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65000.1	8.2e-34	74.39	unknown protein	[more]
AT5G38060.1	5.9e-08	34.18	unknown protein	[more]

BLAST of CmoCh20G009090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118523\|ref\|XP_008459165.1\|	2.9e-41	91.11	PREDICTED: uncharacterized protein LOC103498365 [Cucumis melo]	[more]
gi\|449460692\|ref\|XP_004148079.1\|	5.5e-40	88.89	PREDICTED: uncharacterized protein LOC101216981 [Cucumis sativus]	[more]
gi\|645257722\|ref\|XP_008234541.1\|	4.8e-36	81.11	PREDICTED: uncharacterized protein LOC103333479 [Prunus mume]	[more]
gi\|950938682\|ref\|XP_014523383.1\|	6.3e-36	78.72	PREDICTED: uncharacterized protein LOC106779717 [Vigna radiata var. radiata]	[more]
gi\|567889847\|ref\|XP_006437444.1\|	6.3e-36	80.46	hypothetical protein CICLE_v10033194mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G009090.1	CmoCh20G009090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35106	FAMILY NOT NAMED	coord: 9..90 score: 3.9
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..34 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G009090	Cla010240	Watermelon (97103) v1	cmowmB502
CmoCh20G009090	Csa2G442270	Cucumber (Chinese Long) v2	cmocuB533
CmoCh20G009090	ClCG09G017200	Watermelon (Charleston Gray)	cmowcgB472
CmoCh20G009090	Lsi10G002840	Bottle gourd (USVL1VR-Ls)	cmolsiB491
CmoCh20G009090	Cp4.1LG16g02010	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G009090	MELO3C021857.2	Melon (DHL92) v3.6.1	cmomedB570
CmoCh20G009090	CsaV3_2G036650	Cucumber (Chinese Long) v3	cmocucB0639
CmoCh20G009090	Cla97C09G178740	Watermelon (97103) v2	cmowmbB574
CmoCh20G009090	CsGy2G027400	Cucumber (Gy14) v2	cgybcmoB211
CmoCh20G009090	Carg23607	Silver-seed gourd	carcmoB1073

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G009090	Melon (DHL92) v3.6.1	cmomedB563
CmoCh20G009090	Silver-seed gourd	carcmoB1414
CmoCh20G009090	Wax gourd	cmowgoB0693
CmoCh20G009090	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh20G009090	Cucumber (Gy14) v1	cgycmoB0878
CmoCh20G009090	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G009090	Cucurbita maxima (Rimu)	cmacmoB606
CmoCh20G009090	Wild cucumber (PI 183967)	cmocpiB538
CmoCh20G009090	Melon (DHL92) v3.5.1	cmomeB497
CmoCh20G009090	Melon (DHL92) v3.5.1	cmomeB483
CmoCh20G009090	Cucurbita pepo (Zucchini)	cmocpeB534