CmoCh20G008750 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G008750
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionNon-symbiotic hemoglobin
LocationCmo_Chr20 : 4421940 .. 4422852 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATAAGAACACAGACATGGGCACCTGTGGTGGTGAAGGAAGGGTCTTCACTGAACAACAAGAGGCCCTTGTGGTCAAGTCATGGGGTGTCATGAAGAAGAATGCTGCTGATTTGGCCCTCAAACTCTTCCTCAAGTAAGATACTCGTTCTTCGTTCTTCGTTCAAAGGGTTTGTATCAATGCACTAGAGTTGACTGTTCTCTTTTTTAATTGTTGTTGGATCTTAGGATATTTGAAATTGCGCCGTCGGTTAAGAACCTGTTTTCGTTTTTGAGAGACTCGAAAGTTCCGTTGGAGCAAAACACGAAGTTGAAGCCTCATGCGTTGAGTGTCTTCACTATGGTGAGTTTATGAACAAAAATTGACGTACAGTGAATCGTGTTTGATTCGAATCTTGAACCTTTTGGTGTGAATTATAGACTTGTGAGTCAGCCGTTCAGCTTCGAAAAGGAGGGATAGCGGCGGCTAAAGAAACCACTTTGAAGAGGCTAGGTGCTTCGCACCTCAAGTACGGTGTTGTCGATGAACATTTTGAGGTAATCCCGGATTCTATTTCGATCTCGAAACTTAAACTTTATCGTTATTTTGATCGAACGAGAGCGTAATAGTGATTTTTTTGGGTGATAGGTGTTGAAGTATGCACTTTTGGAGACCATTAAGGAAGGAATTCCAGAGATGTGGAGTGTGGAGATGAAAGAGGCATGGGCTGAGGCTTATGATCAATTGGTTTCTGCCATTAAAGCTGAAATGAAGCCTTCTTCCACCTCTTAAACCTTACCCTTTTATGTCTCAATGTTCACCATGTTTAAATAAACGTTTTGTACGGTAGTTTCTAAATTCAAAAGCGCTCGATCGGGTTGAATTATAATTTTAAGAATCAATTCAGTTCTATCCGAGTTCAGGTTTAGTGAG

mRNA sequence

CTCATAAGAACACAGACATGGGCACCTGTGGTGGTGAAGGAAGGGTCTTCACTGAACAACAAGAGGCCCTTGTGGTCAAGTCATGGGGTGTCATGAAGAAGAATGCTGCTGATTTGGCCCTCAAACTCTTCCTCAAGATATTTGAAATTGCGCCGTCGGTTAAGAACCTGTTTTCGTTTTTGAGAGACTCGAAAGTTCCGTTGGAGCAAAACACGAAGTTGAAGCCTCATGCGTTGAGTGTCTTCACTATGACTTGTGAGTCAGCCGTTCAGCTTCGAAAAGGAGGGATAGCGGCGGCTAAAGAAACCACTTTGAAGAGGCTAGGTGCTTCGCACCTCAAGTACGGTGTTGTCGATGAACATTTTGAGGTGTTGAAGTATGCACTTTTGGAGACCATTAAGGAAGGAATTCCAGAGATGTGGAGTGTGGAGATGAAAGAGGCATGGGCTGAGGCTTATGATCAATTGGTTTCTGCCATTAAAGCTGAAATGAAGCCTTCTTCCACCTCTTAAACCTTACCCTTTTATGTCTCAATGTTCACCATGTTTAAATAAACGTTTTGTACGGTAGTTTCTAAATTCAAAAGCGCTCGATCGGGTTGAATTATAATTTTAAGAATCAATTCAGTTCTATCCGAGTTCAGGTTTAGTGAG

Coding sequence (CDS)

ATGGGCACCTGTGGTGGTGAAGGAAGGGTCTTCACTGAACAACAAGAGGCCCTTGTGGTCAAGTCATGGGGTGTCATGAAGAAGAATGCTGCTGATTTGGCCCTCAAACTCTTCCTCAAGATATTTGAAATTGCGCCGTCGGTTAAGAACCTGTTTTCGTTTTTGAGAGACTCGAAAGTTCCGTTGGAGCAAAACACGAAGTTGAAGCCTCATGCGTTGAGTGTCTTCACTATGACTTGTGAGTCAGCCGTTCAGCTTCGAAAAGGAGGGATAGCGGCGGCTAAAGAAACCACTTTGAAGAGGCTAGGTGCTTCGCACCTCAAGTACGGTGTTGTCGATGAACATTTTGAGGTGTTGAAGTATGCACTTTTGGAGACCATTAAGGAAGGAATTCCAGAGATGTGGAGTGTGGAGATGAAAGAGGCATGGGCTGAGGCTTATGATCAATTGGTTTCTGCCATTAAAGCTGAAATGAAGCCTTCTTCCACCTCTTAA
Homology
[Close]
BLAST of CmoCh20G008750 vs. Swiss-Prot
Match: HBL1_MEDSA (Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=MHB1 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-63
Identity = 123/162 (75.93%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MGT   +G  FTE+QEALVVKSW  MKKN+A+L LKLFLKIFEIAPS + LFSFL+DSKV
Sbjct: 1   MGTLDTKG--FTEEQEALVVKSWNAMKKNSAELGLKLFLKIFEIAPSAQKLFSFLKDSKV 60

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLEQNTKLKPHA+SVF MTCESAVQLRK G    +E++LK+LGA+H KYGVVDEHFEV K
Sbjct: 61  PLEQNTKLKPHAMSVFLMTCESAVQLRKSGKVTVRESSLKKLGANHFKYGVVDEHFEVTK 120

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           +ALLETIKE +PEMWS  MK AW EAYDQLV+AIK+EMKPSS
Sbjct: 121 FALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS 160

[Close]
BLAST of CmoCh20G008750 vs. Swiss-Prot
Match: HBL1_GOSHI (Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum GN=HB1 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.2e-62
Identity = 119/156 (76.28%), Postives = 132/156 (84.62%), Query Frame = 1 

Query: 7   EGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQNT 66
           EG+VFTE+QEALVVKSW VMKK  A+L LK FLKIFEIAPS K LFSFLRDS VPLEQNT
Sbjct: 5   EGKVFTEEQEALVVKSWTVMKKKTAELGLKFFLKIFEIAPSAKKLFSFLRDSNVPLEQNT 64

Query: 67  KLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLET 126
           KLKPHA+SVF MTCESAVQLRK G    +E+ LK+LGA+H KYGVVDEHFEV K+ALLET
Sbjct: 65  KLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKYGVVDEHFEVTKFALLET 124

Query: 127 IKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           IKE +P+MWS EMK AW EAYD+LV+AIK EMK  S
Sbjct: 125 IKEAVPDMWSDEMKNAWGEAYDRLVAAIKIEMKACS 160

[Close]
BLAST of CmoCh20G008750 vs. Swiss-Prot
Match: HBL1_ARATH (Non-symbiotic hemoglobin 1 OS=Arabidopsis thaliana GN=AHB1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.9e-61
Identity = 119/157 (75.80%), Postives = 133/157 (84.71%), Query Frame = 1 

Query: 7   EGR-VFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQN 66
           EG+ VFTE+QEALVVKSW VMKKN+A+L LKLF+KIFEIAP+ K +FSFLRDS +P EQN
Sbjct: 4   EGKIVFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQN 63

Query: 67  TKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLE 126
            KLKPHA+SVF M CESAVQLRK G    +ETTLKRLGASH KYGVVDEHFEV KYALLE
Sbjct: 64  PKLKPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLE 123

Query: 127 TIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           TIKE +PEMWS EMK AW +AYD LV+AIKAEM  S+
Sbjct: 124 TIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAEMNLSN 160

[Close]
BLAST of CmoCh20G008750 vs. Swiss-Prot
Match: HBPL_PARRI (Non-legume hemoglobin OS=Parasponia rigida PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-60
Identity = 116/155 (74.84%), Postives = 132/155 (85.16%), Query Frame = 1 

Query: 9   RVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQNTKL 68
           +VFTE+QEALVVK+W VMKKN+A+L L+ FLKIFEIAPS KNLFS+L+DS VPLEQN KL
Sbjct: 8   KVFTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDSPVPLEQNPKL 67

Query: 69  KPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLETIK 128
           KPHA +VF MTCESAVQLRK G A  KE+ LKR+GA H K GVV+EHFEV ++ALLETIK
Sbjct: 68  KPHATTVFVMTCESAVQLRKAGKATVKESDLKRIGAIHFKTGVVNEHFEVTRFALLETIK 127

Query: 129 EGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSST 164
           E +PEMWS EMK AW  AYDQLV+AIK EMKPSST
Sbjct: 128 EAVPEMWSPEMKNAWGVAYDQLVAAIKFEMKPSST 162

[Close]
BLAST of CmoCh20G008750 vs. Swiss-Prot
Match: HBPL_PARAD (Non-legume hemoglobin OS=Parasponia andersonii PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-60
Identity = 116/155 (74.84%), Postives = 132/155 (85.16%), Query Frame = 1 

Query: 9   RVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQNTKL 68
           +VFTE+QEALVVK+W VMKKN+A+L L+ FLKIFEIAPS KNLFS+L+DS VPLEQN KL
Sbjct: 8   KVFTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDSPVPLEQNPKL 67

Query: 69  KPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLETIK 128
           KPHA +VF MTCESAVQLRK G A  KE+ LKR+GA H K GVV+EHFEV ++ALLETIK
Sbjct: 68  KPHATTVFVMTCESAVQLRKAGKATVKESDLKRIGAIHFKTGVVNEHFEVTRFALLETIK 127

Query: 129 EGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSST 164
           E +PEMWS EMK AW  AYDQLV+AIK EMKPSST
Sbjct: 128 EAVPEMWSPEMKNAWGVAYDQLVAAIKFEMKPSST 162

[Close]
BLAST of CmoCh20G008750 vs. TrEMBL
Match: A0A0A0LLW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238880 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-68
Identity = 132/160 (82.50%), Postives = 148/160 (92.50%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MG+CG E ++F+E+QEALV+KSW VMKKNA DLA K FLKIFEIAPS + +F FLRDSKV
Sbjct: 1   MGSCG-ERKIFSEEQEALVIKSWSVMKKNAPDLAFKFFLKIFEIAPSAQKMFPFLRDSKV 60

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLEQN KLKPHAL+VFT+TCESAVQLRKGGIAAAKE+T+KRLGA+HLKYGV+DEHFEV K
Sbjct: 61  PLEQNPKLKPHALNVFTLTCESAVQLRKGGIAAAKESTMKRLGATHLKYGVLDEHFEVTK 120

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKP 161
           +ALLETIKEGIPEMWSVEMK AWAEAYDQLVSAIKA+MKP
Sbjct: 121 FALLETIKEGIPEMWSVEMKGAWAEAYDQLVSAIKAQMKP 159

[Close]
BLAST of CmoCh20G008750 vs. TrEMBL
Match: Q4VIX3_GOSHI (Non-symbiotic hemoglobin protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-61
Identity = 121/156 (77.56%), Postives = 134/156 (85.90%), Query Frame = 1 

Query: 7   EGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQNT 66
           EG+VFTE+QEALVVKSW VMKKNAA+L LK FLKIFEIAPS K LFSFLRDS VPLEQNT
Sbjct: 5   EGKVFTEEQEALVVKSWTVMKKNAAELGLKFFLKIFEIAPSAKKLFSFLRDSNVPLEQNT 64

Query: 67  KLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLET 126
           KLKPHA+SVF MTCESAVQLRK G    +E+ LK+LGA+H KYGVVDEHFEV K+ALLET
Sbjct: 65  KLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKYGVVDEHFEVTKFALLET 124

Query: 127 IKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           IKE +P+MWS EMK AW EAYD+LV+AIK EMK  S
Sbjct: 125 IKEAVPDMWSDEMKNAWGEAYDRLVAAIKIEMKACS 160

[Close]
BLAST of CmoCh20G008750 vs. TrEMBL
Match: A0A0D3D3U9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-61
Identity = 123/156 (78.85%), Postives = 133/156 (85.26%), Query Frame = 1 

Query: 7   EGR-VFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQN 66
           EG+ VFTE+QEALVVKSW VMKKN+ADL LKLF+KIFEIAP+ K LFSFLRDS +P EQN
Sbjct: 4   EGKIVFTEEQEALVVKSWSVMKKNSADLGLKLFIKIFEIAPTAKKLFSFLRDSPIPAEQN 63

Query: 67  TKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLE 126
            KLKPHA+SVF M CESA QLRK G    KETTLKRLGASH KYGVVDEHFEV KYALLE
Sbjct: 64  PKLKPHAMSVFVMCCESAAQLRKTGKVTVKETTLKRLGASHSKYGVVDEHFEVTKYALLE 123

Query: 127 TIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPS 162
           TIKE +PEMWS EMK AW +AYD LV+AIKAEMKPS
Sbjct: 124 TIKEAVPEMWSPEMKSAWGQAYDHLVAAIKAEMKPS 159

[Close]
BLAST of CmoCh20G008750 vs. TrEMBL
Match: A0A0D2V792_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G163500 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-61
Identity = 121/156 (77.56%), Postives = 134/156 (85.90%), Query Frame = 1 

Query: 7   EGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQNT 66
           EG+VFTE+QEALVVKSW VMKKNAA+L LK FLKIFEIAPS K LFSFLRDS VPLEQNT
Sbjct: 5   EGKVFTEEQEALVVKSWTVMKKNAAELGLKFFLKIFEIAPSAKKLFSFLRDSNVPLEQNT 64

Query: 67  KLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLET 126
           KLKPHA+SVF MTCESAVQLRK G    +E+ LK+LGA+H KYGVVDEHFEV K+ALLET
Sbjct: 65  KLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKYGVVDEHFEVTKFALLET 124

Query: 127 IKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           IKE +P+MWS EMK AW EAYD+LV+AIK EMK  S
Sbjct: 125 IKEAVPDMWSDEMKNAWGEAYDRLVAAIKIEMKACS 160

[Close]
BLAST of CmoCh20G008750 vs. TrEMBL
Match: I3SPW2_MEDTR (Non-symbiotic hemoglobin OS=Medicago truncatula GN=MTR_4g068860 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.2e-61
Identity = 122/162 (75.31%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MGT   +G  FTE+QEALVVKSW  MKKN+A+L LKLFLKIFEIAPS + LFSFL+DSKV
Sbjct: 1   MGTLDTKG--FTEEQEALVVKSWNAMKKNSAELGLKLFLKIFEIAPSAQKLFSFLKDSKV 60

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLE+NTKLKPHA+SVF MTCESAVQLRK G    +E++LK+LGA+H KYGVVDEHFEV K
Sbjct: 61  PLEKNTKLKPHAMSVFLMTCESAVQLRKSGKVTVRESSLKKLGANHFKYGVVDEHFEVTK 120

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           +ALLETIKE +PEMWS  MK AW EAYDQLV+AIK+EMKPSS
Sbjct: 121 FALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS 160

[Close]
BLAST of CmoCh20G008750 vs. TAIR10
Match: AT2G16060.1 (AT2G16060.1 hemoglobin 1)

HSP 1 Score: 234.6 bits (597), Expect = 4.4e-62
Identity = 119/157 (75.80%), Postives = 133/157 (84.71%), Query Frame = 1 

Query: 7   EGR-VFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQN 66
           EG+ VFTE+QEALVVKSW VMKKN+A+L LKLF+KIFEIAP+ K +FSFLRDS +P EQN
Sbjct: 4   EGKIVFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQN 63

Query: 67  TKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLE 126
            KLKPHA+SVF M CESAVQLRK G    +ETTLKRLGASH KYGVVDEHFEV KYALLE
Sbjct: 64  PKLKPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLE 123

Query: 127 TIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           TIKE +PEMWS EMK AW +AYD LV+AIKAEM  S+
Sbjct: 124 TIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAEMNLSN 160

[Close]
BLAST of CmoCh20G008750 vs. TAIR10
Match: AT3G10520.1 (AT3G10520.1 haemoglobin 2)

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-39
Identity = 81/149 (54.36%), Postives = 107/149 (71.81%), Query Frame = 1 

Query: 11  FTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQNTKLKP 70
           FTE+QEALV +SW ++K++    +L  F +I EIAP+ K LFSFLRDS      N KLK 
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 71  HALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLETIKEG 130
           HA+ VF MTCE+A+QLR+ G     +TTL+ LG+ HLK GV+D HFEV+K ALL T+KEG
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 131 IPEMWSVEMKEAWAEAYDQLVSAIKAEMK 160
           + E ++ E++ AW++AYD L  AIK EMK
Sbjct: 126 LGEKYNEEVEGAWSQAYDHLALAIKTEMK 154

[Close]
BLAST of CmoCh20G008750 vs. NCBI nr
Match: gi|659118748|ref|XP_008459284.1| (PREDICTED: plastid division protein PDV2 [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 4.9e-71
Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MG+CG EG+VFTE+QEALV+KSW VMKKNAADLA K FLKIFEIAPS + +F FLRDSKV
Sbjct: 316 MGSCG-EGKVFTEEQEALVIKSWSVMKKNAADLAFKFFLKIFEIAPSAQKMFPFLRDSKV 375

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLEQN KLKPHAL+VFT+TCESAVQLRKGGIAAAKETT+KRLGA+HLKYGV+DEHFEV K
Sbjct: 376 PLEQNPKLKPHALNVFTLTCESAVQLRKGGIAAAKETTIKRLGATHLKYGVLDEHFEVTK 435

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKP 161
           +ALLETIKEGIPEMWSVEMK AWAEAYDQLVSAIKAEMKP
Sbjct: 436 FALLETIKEGIPEMWSVEMKGAWAEAYDQLVSAIKAEMKP 474

[Close]
BLAST of CmoCh20G008750 vs. NCBI nr
Match: gi|449455316|ref|XP_004145399.1| (PREDICTED: plastid division protein PDV2 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-68
Identity = 132/160 (82.50%), Postives = 148/160 (92.50%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MG+CG E ++F+E+QEALV+KSW VMKKNA DLA K FLKIFEIAPS + +F FLRDSKV
Sbjct: 342 MGSCG-ERKIFSEEQEALVIKSWSVMKKNAPDLAFKFFLKIFEIAPSAQKMFPFLRDSKV 401

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLEQN KLKPHAL+VFT+TCESAVQLRKGGIAAAKE+T+KRLGA+HLKYGV+DEHFEV K
Sbjct: 402 PLEQNPKLKPHALNVFTLTCESAVQLRKGGIAAAKESTMKRLGATHLKYGVLDEHFEVTK 461

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKP 161
           +ALLETIKEGIPEMWSVEMK AWAEAYDQLVSAIKA+MKP
Sbjct: 462 FALLETIKEGIPEMWSVEMKGAWAEAYDQLVSAIKAQMKP 500

[Close]
BLAST of CmoCh20G008750 vs. NCBI nr
Match: gi|700206653|gb|KGN61772.1| (hypothetical protein Csa_2G238880 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-68
Identity = 132/160 (82.50%), Postives = 148/160 (92.50%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MG+CG E ++F+E+QEALV+KSW VMKKNA DLA K FLKIFEIAPS + +F FLRDSKV
Sbjct: 1   MGSCG-ERKIFSEEQEALVIKSWSVMKKNAPDLAFKFFLKIFEIAPSAQKMFPFLRDSKV 60

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLEQN KLKPHAL+VFT+TCESAVQLRKGGIAAAKE+T+KRLGA+HLKYGV+DEHFEV K
Sbjct: 61  PLEQNPKLKPHALNVFTLTCESAVQLRKGGIAAAKESTMKRLGATHLKYGVLDEHFEVTK 120

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKP 161
           +ALLETIKEGIPEMWSVEMK AWAEAYDQLVSAIKA+MKP
Sbjct: 121 FALLETIKEGIPEMWSVEMKGAWAEAYDQLVSAIKAQMKP 159

[Close]
BLAST of CmoCh20G008750 vs. NCBI nr
Match: gi|22001646|sp|Q9FVL0.1|HBL1_MEDSA (RecName: Full=Non-symbiotic hemoglobin 1; AltName: Full=MEDsa GLB1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 123/162 (75.93%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 1   MGTCGGEGRVFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKV 60
           MGT   +G  FTE+QEALVVKSW  MKKN+A+L LKLFLKIFEIAPS + LFSFL+DSKV
Sbjct: 1   MGTLDTKG--FTEEQEALVVKSWNAMKKNSAELGLKLFLKIFEIAPSAQKLFSFLKDSKV 60

Query: 61  PLEQNTKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLK 120
           PLEQNTKLKPHA+SVF MTCESAVQLRK G    +E++LK+LGA+H KYGVVDEHFEV K
Sbjct: 61  PLEQNTKLKPHAMSVFLMTCESAVQLRKSGKVTVRESSLKKLGANHFKYGVVDEHFEVTK 120

Query: 121 YALLETIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPSS 163
           +ALLETIKE +PEMWS  MK AW EAYDQLV+AIK+EMKPSS
Sbjct: 121 FALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS 160

[Close]
BLAST of CmoCh20G008750 vs. NCBI nr
Match: gi|922526733|ref|XP_013596458.1| (PREDICTED: non-symbiotic hemoglobin 1 [Brassica oleracea var. oleracea])

HSP 1 Score: 243.0 bits (619), Expect = 3.5e-61
Identity = 123/156 (78.85%), Postives = 133/156 (85.26%), Query Frame = 1 

Query: 7   EGR-VFTEQQEALVVKSWGVMKKNAADLALKLFLKIFEIAPSVKNLFSFLRDSKVPLEQN 66
           EG+ VFTE+QEALVVKSW VMKKN+ADL LKLF+KIFEIAP+ K LFSFLRDS +P EQN
Sbjct: 4   EGKIVFTEEQEALVVKSWSVMKKNSADLGLKLFIKIFEIAPTAKKLFSFLRDSPIPAEQN 63

Query: 67  TKLKPHALSVFTMTCESAVQLRKGGIAAAKETTLKRLGASHLKYGVVDEHFEVLKYALLE 126
            KLKPHA+SVF M CESA QLRK G    KETTLKRLGASH KYGVVDEHFEV KYALLE
Sbjct: 64  PKLKPHAMSVFVMCCESAAQLRKTGKVTVKETTLKRLGASHSKYGVVDEHFEVTKYALLE 123

Query: 127 TIKEGIPEMWSVEMKEAWAEAYDQLVSAIKAEMKPS 162
           TIKE +PEMWS EMK AW +AYD LV+AIKAEMKPS
Sbjct: 124 TIKEAVPEMWSPEMKSAWGQAYDHLVAAIKAEMKPS 159

The following BLAST results are available for this feature:
BLAST of CmoCh20G008750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HBL1_MEDSA1.3e-6375.93Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=MHB1 PE=2 SV=1[more]
HBL1_GOSHI3.2e-6276.28Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum GN=HB1 PE=2 SV=1[more]
HBL1_ARATH7.9e-6175.80Non-symbiotic hemoglobin 1 OS=Arabidopsis thaliana GN=AHB1 PE=1 SV=1[more]
HBPL_PARRI2.3e-6074.84Non-legume hemoglobin OS=Parasponia rigida PE=1 SV=2[more]
HBPL_PARAD2.3e-6074.84Non-legume hemoglobin OS=Parasponia andersonii PE=1 SV=2[more]
BLAST of CmoCh20G008750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLW6_CUCSA2.7e-6882.50Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238880 PE=3 SV=1[more]
Q4VIX3_GOSHI2.5e-6177.56Non-symbiotic hemoglobin protein OS=Gossypium hirsutum PE=2 SV=1[more]
A0A0D3D3U9_BRAOL2.5e-6178.85Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1[more]
A0A0D2V792_GOSRA2.5e-6177.56Uncharacterized protein OS=Gossypium raimondii GN=B456_012G163500 PE=4 SV=1[more]
I3SPW2_MEDTR4.2e-6175.31Non-symbiotic hemoglobin OS=Medicago truncatula GN=MTR_4g068860 PE=2 SV=1[more]
BLAST of CmoCh20G008750 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G16060.14.4e-6275.80 hemoglobin 1[more]
AT3G10520.11.8e-3954.36 haemoglobin 2[more]
BLAST of CmoCh20G008750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118748|ref|XP_008459284.1|4.9e-7186.25PREDICTED: plastid division protein PDV2 [Cucumis melo][more]
gi|449455316|ref|XP_004145399.1|3.9e-6882.50PREDICTED: plastid division protein PDV2 [Cucumis sativus][more]
gi|700206653|gb|KGN61772.1|3.9e-6882.50hypothetical protein Csa_2G238880 [Cucumis sativus][more]
gi|22001646|sp|Q9FVL0.1|HBL1_MEDSA2.1e-6175.93RecName: Full=Non-symbiotic hemoglobin 1; AltName: Full=MEDsa GLB1[more]
gi|922526733|ref|XP_013596458.1|3.5e-6178.85PREDICTED: non-symbiotic hemoglobin 1 [Brassica oleracea var. oleracea][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000971Globin
IPR001032Leghaemoglobin
IPR009050Globin-like_sf
IPR012292Globin/Proto
Vocabulary: Molecular Function
TermDefinition
GO:0019825oxygen binding
GO:0020037heme binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015671 oxygen transport
biological_process GO:0010020 chloroplast fission
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016363 nuclear matrix
cellular_component GO:0071944 cell periphery
cellular_component GO:0005618 cell wall
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005575 cellular_component
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0019825 oxygen binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005344 oxygen transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G008750.1CmoCh20G008750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000971GlobinPFAMPF00042Globincoord: 15..123
score: 1.2
IPR000971GlobinPROFILEPS01033GLOBINcoord: 11..159
score: 26
IPR001032LeghaemoglobinPRINTSPR00188PLANTGLOBINcoord: 12..29
score: 6.0E-41coord: 37..57
score: 6.0E-41coord: 65..93
score: 6.0E-41coord: 130..156
score: 6.0
IPR009050Globin-likeunknownSSF46458Globin-likecoord: 11..159
score: 4.71
IPR012292Globin/ProtoglobinGENE3DG3DSA:1.10.490.10coord: 11..159
score: 2.3
NoneNo IPR availablePANTHERPTHR22924LEGHEMOGLOBIN-RELATEDcoord: 9..162
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G008750Cucsa.109820Cucumber (Gy14) v1cgycmoB0252
CmoCh20G008750CmaCh20G008650Cucurbita maxima (Rimu)cmacmoB551
CmoCh20G008750CmaCh02G004180Cucurbita maxima (Rimu)cmacmoB606
CmoCh20G008750Cla010300Watermelon (97103) v1cmowmB502
CmoCh20G008750Csa2G238880Cucumber (Chinese Long) v2cmocuB531
CmoCh20G008750MELO3C021953Melon (DHL92) v3.5.1cmomeB483
CmoCh20G008750ClCG09G017870Watermelon (Charleston Gray)cmowcgB472
CmoCh20G008750CSPI02G11960Wild cucumber (PI 183967)cmocpiB536
CmoCh20G008750Lsi10G003430Bottle gourd (USVL1VR-Ls)cmolsiB491
CmoCh20G008750Cp4.1LG16g02200Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G008750Cp4.1LG05g12380Cucurbita pepo (Zucchini)cmocpeB534
CmoCh20G008750MELO3C021952.2Melon (DHL92) v3.6.1cmomedB563
CmoCh20G008750CsaV3_2G014490Cucumber (Chinese Long) v3cmocucB0637
CmoCh20G008750Cla97C09G179280Watermelon (97103) v2cmowmbB574
CmoCh20G008750CsGy2G012000Cucumber (Gy14) v2cgybcmoB209
CmoCh20G008750Carg22960Silver-seed gourdcarcmoB1203
CmoCh20G008750Carg23634Silver-seed gourdcarcmoB1073
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G008750CmoCh02G004190Cucurbita moschata (Rifu)cmocmoB404
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G008750Watermelon (97103) v2cmowmbB550
CmoCh20G008750Wax gourdcmowgoB0677
CmoCh20G008750Wax gourdcmowgoB0679
CmoCh20G008750Wax gourdcmowgoB0693
CmoCh20G008750Cucurbita moschata (Rifu)cmocmoB382
CmoCh20G008750Cucurbita maxima (Rimu)cmacmoB518
CmoCh20G008750Melon (DHL92) v3.5.1cmomeB503
CmoCh20G008750Watermelon (Charleston Gray)cmowcgB485
CmoCh20G008750Watermelon (97103) v1cmowmB516
CmoCh20G008750Cucurbita pepo (Zucchini)cmocpeB514
CmoCh20G008750Bottle gourd (USVL1VR-Ls)cmolsiB500
CmoCh20G008750Melon (DHL92) v3.6.1cmomedB579