CmoCh20G008230 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTCTGAAAGAAACTGAAGCACTTCACAGAATTATGCTTCCTTCCAATCTTCATTCTCCCGCGGCAAATTTGTTTTTGCTTCCATCAACGTCATGCTCGCCCTGTAATCATGGTTCTTCCTCTCTGTCTCTCTCTTTCTACTGTATGTTCTTTTTTTCGTAGTATTGTTATGTTATATTTCAGTTGGGAACTTGTTCTGATTGTTCATAGTTAGTTCTAGCCGAAATTGTATGTTGATTTTATGTCAATTGGAACTGGATTTTGAAGCTAAGTGGATGAGCTCAAATTCATCAATGCATATGATCTTCACGCATCAGGGATTTGGATTTCGAGGAATCAGAATCGAAGAAATCGAAGACGGACAACAATGAGTGTTGCAACGGAAGTGGTGCTTTCTCAAGCAGGGAATCGGCTTTACCTTGGGATGGATTTTGGTACCTCTGGGGCAAGATTTGCGCTCATTGACAAGGAAGGAGCTGTTTGTGCGGAAGGAAAGAGGGAGTATCCGCTCTTTAAGGTACGTGAGTACAGAAGTTACGAATCATGATGATAATTTGAAGTTTTGTTTATATTTGTGAGGTAATCAGGTGAAATTTTGTTTTCAATTTACTGATGGATGAGCTAAACTCAGCCTGTATGAACATATTTAATAGTGGCTTGCTTAAATTGGTTGATGTGTTTTTTTAGAGTTATTTGGTGGGGAAGGGACATCATCAATGCCATAGCAGGCAAATGTTGTCTATTAAATATTGAAATTAACCATTGACAATTACGAGTTAACTATTTGGAATCTTGGTAAGTGAAGATTGCTTCGAATGAGGACATGTTGATGTGAGATATCCCCTATCACATTTCGTCTTGGGCTGTGGAGTTGAATGGCTTACTGCCTTACTGCTTAGATCGAAATTAAGTCAGGTACTTCAATGGTATCTAAGAAAAAAACTCAATTACGCCGAAGGACTCTCAAGTTTAGATTGCCTCGATGCCAGTTTACTAATGGCTTAATTTCAAGTTTTCGAACCACTAACTTCCCTAATTGTTGTGAAGTTAGATAGTGTGAGATCCGACATCGGCTGGAGAGGGAATGAAACATTTTTATAAGAGTGTGGAAACCTCTCCCTAGAAGACGCATTTTAAAACCTTGAGGGGAAGCCTAGAAAGGAAAGCCCAAAGAGGACAATATCCGCCAATGGTGGCTTGAGCTGTTATAAATGGTATTAGAGCCAGACACTGGGCAGGGTGCTGGCGAGGACGTTGGGCCCCGAAGGGGGTGGATTGTGAGATCTCACATCGATTGGAGAGGGAAATGAGTGTCAGCGAGGACACTGGACCTTGAAGGAGGGTAGATTGTGAGATCCCACATTGGTTAGAGAGGAGAATGAAGCATTCTTTATTAGAGTGTGAAAACCTCTCCTTAGAAGACGCATTTCAAAACCTTGAGGGGAGACTCGGAAGGGAAAGCTCAAAGAGGACAATATCGGCTAGCGGTGAGCTTGGACTGTTACAGATAGTTTAGTTTGTTCCAAACTTGGTGAATATGGAGAGAGTGTTTTTAATAGATAAGTTAAGAAGGAAACACTTCCTGATACTGCAAGGTTAATTTTGTTTTAATAATGCTCGACTCTGTTAGAGAGAAGGAATCAGGTTGTGTTGATTCACTCGTAGCAGCATGAATACAGCAATCAGGAATGATGTTACTTTACTGTTGTCTAGAAAGAATGACGAAACAATCGACTGGGCAAGATCGTGGAAAACAACACTTTTCTCATTGCTTGAAGATGTTCCAAATCATTATCGTCATTTGGTGGCATCTATTTCTATTGATGGCACATCTGCAACAACCATAATTGTGGACAGGTCATCATGCTTTAGAAATTTCTGCCCTTCATTAGACTCTGTCCCTTCATGTAAAGTCTGTATTTGAAGCAGCCTATACTTGTGCAGCAACACAGGACAGCCATTGTCAAAGCCATTATTGTACAATGAGACTTGTCCTGATGCCTTACCATTGGTGAAGTCTATTGCTCCAGTGAACCATACAGTCTGCTCTGCGTCATCTACTTTATGCAAGCTGGTTTCATGGTGGAACAGTGCCGACTCAAATAAAGAATATGCCACATTGTTACATCAAGCAGATTGGTTGTTGTGGTTTCTACATGGGAAGCTTGGGGTTTCAGATTATAATAATGCTCTGAAGGTGCTCTTTAACAAGTTTTTTGCACTTTGAGTGCATCTTATGTTTTCCAGATCACTTTAGAATAGCCAATAGCTAATTAAGCTTTTCTTTCTGCATCACAGGTTGGCTATGATCCTGAAATTGAATCTTACCCACCCTGGCTTCTTGCTCAACCATATTCTATGCTTTTACCTCATGTCAAAGCTCCTGGAACTTCTATTGGATATTTGAAAGAAGACATTAGATCACAATATGGTACATTCGCCAATTTTTACTACCACGAATACAAGTAACTTAGAGTACCAAAATGTGAAACTGTAGTAAGTCCAAGCCCACTGCTAGAAGATATTGTCTTCTTTGGGCTTTCCTTTCCAGGCTCTCACTCAAGGTTTGTAAAACGCATTTGCTAAGGAGAGGTTACAAATGGTATCAGAGCTAGACATCGGGTGATGTGCCAGCGAAGAGGCTGAGTCCCGAAGGGGGTGGATCATGAGATTCCACATCGGTTGGAGAAAGGAACGAAGTATTTTTTATAAGAGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACTTTGAGGGAAAGCCAAGAAGGGAAAACCCAAAGAGGACAATATCTTGTAATGCTTGTAATGGTGGGCTTGGGCTGTTACAGAAAATGGTTGTTGGAAAAGTTTGGTGAGAATATTTTTTTGATGGAAGGATGCCTTGCCTAGTAAAGATTGATTCTATGAAAATTTAACACATAAAAATGAAATGGTTATGTTATAACATACAAAATTTCAATTGTTATTTACATATACAAGTTCAATGTTTGTTGGTTGGTTTGAAGTCCAACTCCTATTGTAAGCAGTTAAATGTTTGTATGATGCTCTGAAGCACTTTGTGAAGTGTATGCTGCATCTCATATCTATAAACAATTACATTCAAGTCTCTCATCTGAGTTCATCCAGTGATAGCTTTTGTATGTTTTGAACGAGTTGGCGTTTAACAAGAACCTTTGTGCAGATTTTCCAAATGATTGCATTGCATGCACAGGAACCACAGATAGTATTGCTGCATTTCTTGCAGCACGTGCGACACTGCCGGGGCAAGCTGTAAGGATTCTATATGACTTTTTTTTTTCCTAATATTTCTGTCACGCACTTGGGGAAAAGGGTTTCCCGACTTACTTACCTTGCTAGGTACAGAGGATAGAAATACGAAGGTTTATTACCGTCTTATTTTGATATTTTTGATATACATGATAGATCAACTGGGAGTAGATTTACAGGAATCTCCTCCAGGACCCTGTCTTGCCGGGACTTGAATTTGCAAGTCCAGGTTTCCATCCCTTGATTAATCAATTAAAAAAAGAAACAAGTTGTCCCCATTTTATTTATTTATTTTAAATTGTGATGGTTTTCACACAATTCCTCTTTCTTTTTTTTCTTTTTTTCTTTTTTTTTTTTAGTAAATATTTGAATTTTTAGCAAAATTTTAAATTTCAAGAATTATTTTAAATAGTTTTCAAAAACAAAGAAACTTTTAAGGGAAAGTAGTGTTTATTTGCTTAGAAAATAAAAATGTCTAATAAAAATGAAATGATTGTATGAGACTTAGGTATTCAGTTACTGAATTTTGATTACGAGTTATTATTTATAAAAATGAACGAAAAGAATTACCAAGTCTCTCCTTAAAGGATACATTTCAAGATTACAATCGGGTGAAAACTCTTCGTTCAAAGTGTCTTTGGTCAAAATTCTTAAAAGAAGGGAGTAAAACACTCTAACAAGACTCCTGTGGCTGGAATATTACTTTTACCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCCCCCCCCCCCCTACAACTTTTATCACGTGGGCAGACAGTTGGCTCTTCGCCTCACTCTTTATGCAGGGTCCAATTCTTTCTCCATTTGTACCCTTTGGTTTTGGATGGTTTTAGTTTCATTTATCTATTATATTCTCTGCCTTCTCAGTCATGTTTGTACTAAATGCTGTTTAGGTCACTTCCTTGGGATCCACGCTTGCCATCAAATTACTGAGTACCAATAGGATTGACGACGCACGGTTTGGAGTGTACAGCCACCGACTTGACAATATGTGGCTCGTAGGAGGTGCTTCAAACACAGGAGGAGCCGTTCTAAGACAAATCTTTACTGACAAGCAATTAGAAGAATTGAGCAAACAAATCAATCCCATGCAAAGTTCTCCTCTAGATTACTACCCTTTGACTTCAATTGGAGAGAGATTTCCGGAGGCAGACCCACAAATGGCTCCCAGGTTTCATCTCCTTCTGTTTCAATCAATAAGTCCCTGATATGTTGTTGATTTCACATTCCAGTCAGTATGCTGATACTTCACATCTTCATTTAATAGTTGCGCCATTAATTAGAGTAAATTTTTACTGTTTCTAAAGTGACACAAGCATCAAAAGTAACTACAACTTTGTGGATTTCTTTGTTTTTCATATATAGATTACATCCACGGCCAGAAAATGATGTCGAATATTTGCATGGAATTTTGGAATCTATTGCCCGTATTGAGGTAAGGATGAAAAGACCCCATGCTCTTTGGTTCAAATACTTCGACTAGATGCCTCAAATTTGGTCTCTTTTATACATTTTAGGGAAAGGCTTATAGGTCATTAAAGGATCTAGGAGCAACTCAGGTAGAAGAAGTGTTCACAGCTGGCGGTGGATCCAAGAATGAGAAATGGACGAAGATACGAGAGAGAGTTCTTGGTTTGCCTGTGAGTCGGGCAAGTCAGACCGAGGCTGCATATGGAGCAGCTCTATTGGCATTAAGAGGTGCGCAATTATTCATGCAATGAGAGCTTTGTACATTGTTGAACCCTGAATATTTTGCCATTTTGGTGGCTATTAAACAAACTTATATAAGCTCCAATTAAAGAATAGTGGGTACAATTAAATGAAAGATGCATACTTTCGGG CAATTCTGAAAGAAACTGAAGCACTTCACAGAATTATGCTTCCTTCCAATCTTCATTCTCCCGCGGCAAATTTGTTTTTGCTTCCATCAACGTCATGCTCGCCCTGTAATCATGCTAAGTGGATGAGCTCAAATTCATCAATGCATATGATCTTCACGCATCAGGGATTTGGATTTCGAGGAATCAGAATCGAAGAAATCGAAGACGGACAACAATGAGTGTTGCAACGGAAGTGGTGCTTTCTCAAGCAGGGAATCGGCTTTACCTTGGGATGGATTTTGGTACCTCTGGGGCAAGATTTGCGCTCATTGACAAGGAAGGAGCTGTTTGTGCGGAAGGAAAGAGGGAGTATCCGCTCTTTAAGAATGACGAAACAATCGACTGGGCAAGATCGTGGAAAACAACACTTTTCTCATTGCTTGAAGATGTTCCAAATCATTATCGTCATTTGGTGGCATCTATTTCTATTGATGGCACATCTGCAACAACCATAATTGTGGACAGCCTATACTTGTGCAGCAACACAGGACAGCCATTGTCAAAGCCATTATTGTACAATGAGACTTGTCCTGATGCCTTACCATTGGTGAAGTCTATTGCTCCAGTGAACCATACAGTCTGCTCTGCGTCATCTACTTTATGCAAGCTGGTTTCATGGTGGAACAGTGCCGACTCAAATAAAGAATATGCCACATTGTTACATCAAGCAGATTGGTTGTTGTGGTTTCTACATGGGAAGCTTGGGGTTTCAGATTATAATAATGCTCTGAAGGTTGGCTATGATCCTGAAATTGAATCTTACCCACCCTGGCTTCTTGCTCAACCATATTCTATGCTTTTACCTCATGTCAAAGCTCCTGGAACTTCTATTGGATATTTGAAAGAAGACATTAGATCACAATATGATTTTCCAAATGATTGCATTGCATGCACAGGAACCACAGATAGTATTGCTGCATTTCTTGCAGCACGTGCGACACTGCCGGGGCAAGCTGTCACTTCCTTGGGATCCACGCTTGCCATCAAATTACTGAGTACCAATAGGATTGACGACGCACGGTTTGGAGTGTACAGCCACCGACTTGACAATATGTGGCTCGTAGGAGGTGCTTCAAACACAGGAGGAGCCGTTCTAAGACAAATCTTTACTGACAAGCAATTAGAAGAATTGAGCAAACAAATCAATCCCATGCAAAGTTCTCCTCTAGATTACTACCCTTTGACTTCAATTGGAGAGAGATTTCCGGAGGCAGACCCACAAATGGCTCCCAGATTACATCCACGGCCAGAAAATGATGTCGAATATTTGCATGGAATTTTGGAATCTATTGCCCGTATTGAGGGAAAGGCTTATAGGTCATTAAAGGATCTAGGAGCAACTCAGGTAGAAGAAGTGTTCACAGCTGGCGGTGGATCCAAGAATGAGAAATGGACGAAGATACGAGAGAGAGTTCTTGGTTTGCCTGTGAGTCGGGCAAGTCAGACCGAGGCTGCATATGGAGCAGCTCTATTGGCATTAAGAGGTGCGCAATTATTCATGCAATGAGAGCTTTGTACATTGTTGAACCCTGAATATTTTGCCATTTTGGTGGCTATTAAACAAACTTATATAAGCTCCAATTAAAGAATAGTGGGTACAATTAAATGAAAGATGCATACTTTCGGG ATGAGTGTTGCAACGGAAGTGGTGCTTTCTCAAGCAGGGAATCGGCTTTACCTTGGGATGGATTTTGGTACCTCTGGGGCAAGATTTGCGCTCATTGACAAGGAAGGAGCTGTTTGTGCGGAAGGAAAGAGGGAGTATCCGCTCTTTAAGAATGACGAAACAATCGACTGGGCAAGATCGTGGAAAACAACACTTTTCTCATTGCTTGAAGATGTTCCAAATCATTATCGTCATTTGGTGGCATCTATTTCTATTGATGGCACATCTGCAACAACCATAATTGTGGACAGCCTATACTTGTGCAGCAACACAGGACAGCCATTGTCAAAGCCATTATTGTACAATGAGACTTGTCCTGATGCCTTACCATTGGTGAAGTCTATTGCTCCAGTGAACCATACAGTCTGCTCTGCGTCATCTACTTTATGCAAGCTGGTTTCATGGTGGAACAGTGCCGACTCAAATAAAGAATATGCCACATTGTTACATCAAGCAGATTGGTTGTTGTGGTTTCTACATGGGAAGCTTGGGGTTTCAGATTATAATAATGCTCTGAAGGTTGGCTATGATCCTGAAATTGAATCTTACCCACCCTGGCTTCTTGCTCAACCATATTCTATGCTTTTACCTCATGTCAAAGCTCCTGGAACTTCTATTGGATATTTGAAAGAAGACATTAGATCACAATATGATTTTCCAAATGATTGCATTGCATGCACAGGAACCACAGATAGTATTGCTGCATTTCTTGCAGCACGTGCGACACTGCCGGGGCAAGCTGTCACTTCCTTGGGATCCACGCTTGCCATCAAATTACTGAGTACCAATAGGATTGACGACGCACGGTTTGGAGTGTACAGCCACCGACTTGACAATATGTGGCTCGTAGGAGGTGCTTCAAACACAGGAGGAGCCGTTCTAAGACAAATCTTTACTGACAAGCAATTAGAAGAATTGAGCAAACAAATCAATCCCATGCAAAGTTCTCCTCTAGATTACTACCCTTTGACTTCAATTGGAGAGAGATTTCCGGAGGCAGACCCACAAATGGCTCCCAGATTACATCCACGGCCAGAAAATGATGTCGAATATTTGCATGGAATTTTGGAATCTATTGCCCGTATTGAGGGAAAGGCTTATAGGTCATTAAAGGATCTAGGAGCAACTCAGGTAGAAGAAGTGTTCACAGCTGGCGGTGGATCCAAGAATGAGAAATGGACGAAGATACGAGAGAGAGTTCTTGGTTTGCCTGTGAGTCGGGCAAGTCAGACCGAGGCTGCATATGGAGCAGCTCTATTGGCATTAAGAGGTGCGCAATTATTCATGCAATGA
BLAST of CmoCh20G008230 vs. Swiss-Prot
Match: XYLB_STAXY (Xylulose kinase OS=Staphylococcus xylosus GN=xylB PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 6.7e-14 Identity = 96/448 (21.43%), Postives = 186/448 (41.52%), Query Frame = 1
BLAST of CmoCh20G008230 vs. Swiss-Prot
Match: XYLB_BACSU (Xylulose kinase OS=Bacillus subtilis (strain 168) GN=xylB PE=3 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 1.3e-09 Identity = 105/468 (22.44%), Postives = 189/468 (40.38%), Query Frame = 1
BLAST of CmoCh20G008230 vs. Swiss-Prot
Match: GLPK_PEDPA (Glycerol kinase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=glpK PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.5e-09 Identity = 109/469 (23.24%), Postives = 184/469 (39.23%), Query Frame = 1
BLAST of CmoCh20G008230 vs. Swiss-Prot
Match: LSRK_ECO57 (Autoinducer-2 kinase OS=Escherichia coli O157:H7 GN=lsrK PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 3.0e-06 Identity = 98/464 (21.12%), Postives = 165/464 (35.56%), Query Frame = 1
BLAST of CmoCh20G008230 vs. TrEMBL
Match: A0A0A0LM27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G250940 PE=4 SV=1) HSP 1 Score: 810.4 bits (2092), Expect = 1.0e-231 Identity = 399/439 (90.89%), Postives = 421/439 (95.90%), Query Frame = 1
BLAST of CmoCh20G008230 vs. TrEMBL
Match: A0A067LCE9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26752 PE=4 SV=1) HSP 1 Score: 723.0 bits (1865), Expect = 2.2e-205 Identity = 351/439 (79.95%), Postives = 393/439 (89.52%), Query Frame = 1
BLAST of CmoCh20G008230 vs. TrEMBL
Match: F6I198_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00380 PE=4 SV=1) HSP 1 Score: 704.5 bits (1817), Expect = 8.1e-200 Identity = 343/433 (79.21%), Postives = 384/433 (88.68%), Query Frame = 1
BLAST of CmoCh20G008230 vs. TrEMBL
Match: B9RHB4_RICCO (Xylulose kinase, putative OS=Ricinus communis GN=RCOM_1449420 PE=4 SV=1) HSP 1 Score: 704.1 bits (1816), Expect = 1.1e-199 Identity = 339/429 (79.02%), Postives = 384/429 (89.51%), Query Frame = 1
BLAST of CmoCh20G008230 vs. TrEMBL
Match: A0A0D2W2G0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G033100 PE=4 SV=1) HSP 1 Score: 699.9 bits (1805), Expect = 2.0e-198 Identity = 338/429 (78.79%), Postives = 384/429 (89.51%), Query Frame = 1
BLAST of CmoCh20G008230 vs. TAIR10
Match: AT2G21370.1 (AT2G21370.1 xylulose kinase-1) HSP 1 Score: 645.6 bits (1664), Expect = 2.3e-185 Identity = 311/425 (73.18%), Postives = 362/425 (85.18%), Query Frame = 1
BLAST of CmoCh20G008230 vs. NCBI nr
Match: gi|778669490|ref|XP_004150147.2| (PREDICTED: uncharacterized protein LOC101207446 isoform X2 [Cucumis sativus]) HSP 1 Score: 810.4 bits (2092), Expect = 1.5e-231 Identity = 399/439 (90.89%), Postives = 421/439 (95.90%), Query Frame = 1
BLAST of CmoCh20G008230 vs. NCBI nr
Match: gi|778669488|ref|XP_011649255.1| (PREDICTED: uncharacterized protein LOC101207446 isoform X1 [Cucumis sativus]) HSP 1 Score: 810.4 bits (2092), Expect = 1.5e-231 Identity = 399/439 (90.89%), Postives = 421/439 (95.90%), Query Frame = 1
BLAST of CmoCh20G008230 vs. NCBI nr
Match: gi|659122177|ref|XP_008461007.1| (PREDICTED: uncharacterized protein LOC103499717 isoform X2 [Cucumis melo]) HSP 1 Score: 807.4 bits (2084), Expect = 1.3e-230 Identity = 399/439 (90.89%), Postives = 418/439 (95.22%), Query Frame = 1
BLAST of CmoCh20G008230 vs. NCBI nr
Match: gi|659122175|ref|XP_008461006.1| (PREDICTED: uncharacterized protein LOC103499717 isoform X1 [Cucumis melo]) HSP 1 Score: 807.4 bits (2084), Expect = 1.3e-230 Identity = 399/439 (90.89%), Postives = 418/439 (95.22%), Query Frame = 1
BLAST of CmoCh20G008230 vs. NCBI nr
Match: gi|778669492|ref|XP_011649256.1| (PREDICTED: uncharacterized protein LOC101207446 isoform X3 [Cucumis sativus]) HSP 1 Score: 747.7 bits (1929), Expect = 1.2e-212 Identity = 375/439 (85.42%), Postives = 393/439 (89.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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