CmoCh20G007950 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAGCAAATTGTCAAAATGCAGACCGTTCCATCTAGAAATCAATGTAGCGTTCCCAAAGGCTATATTGCAGTCTATGTGGGAGATACTGAAAGGAGACGGTTCATGGTTCCAATATCAAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGTAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTGCAAACTTCCTGAAGAGAGAAAAAAGACAACCCTCCACACAATTTTTTTCCCATTAGTCAGGGATATACTTGCTTGGTATCCGGACTGACTCGGAGAGGAATTTCTTCAGTGGATGTCGAGTCAGTTCGAAAGTCAGTCCCCACAGGAACATAAACAAAGTCAGCAGGGCAAGTAGTAAATCCAGGATCAGTACCCTTCTCAGTCCTATACCCAGTAGGAGCAGCAGAAACGAAGGTTGAAACATCACTAGAGACATAGGTGGGAACATATGATCCACTAGTAGCATCTAAGTAAGCTGCATACCTTCCTGCACCTGCTTCAGTCGTTTTTGTTGATGGAACAGTTAATTAAGCACTTGAATTTGACCGATAGTGATGCTGGTACTACGCCTTTGCTTGCCTTTCTGTTGATGCCTATAGCTTTCTCATCCTACGTTACATGAATATATCTGGATAAGTGAATGATGAACAGTTTGAATGAAATTTAATCTTTTTTAATCTTTTCTGAATTCCCCTTATGTGAAAACTCAAAGTTTCTTAATTGAAACCAAAAGCCTCTACCAAAGGCATACATTTGATGTTCATAAATTTACTGTTTCAATGAAACTAAATCATGACTATTCTATGCTTTCTGTTTAGTCAGATATCAGTTGCAAGAAAATAATTGATGTCCATTTGTATAGTCTTGAAAGAATATGATGAAATGACGAAACAAACCCTGAAATTGAACGAAACTGAAAGCATGACTGAGTATATGTGATTTTAGATTACTATGCTATGTCCCTATTGCATGATATGTTTATGAGATTATACAGAGATGATGATTTAGGGTTCATCGACTAACCCCTAATCGTGAGCCAGACTCGATCATTGGGTCTTTGTATAACATGTTTTTAGAACTGACTACAATGACTTGTACTTTGTGGAGACTATTAAGGGCTTGCTAGTTAATTCCTAAGAGTGAACTTATCTGAGGGTCTGCAGTAGTGTCTTTACGTTTATGAGTTGGTAGAACTAATGAGTGTCTTGTGGGTGCAATTAGGTGTCTCCAACCACTTCCTAACACTTTCACATTATGGGGCTTACTAGGAAGATGTCAACTAAACCCTCCTAGAGAATTTGAGAACAGTGTCCATAACGGTATGAGGAGAACTAGGGGTTGGAACCAACGTCAGGGTCGCGCCTCGAGTACCATAGGCTGATGTGGACAATGTTGATGAAAATGACTAGTAGATAGCTAATCAAGATACCTTAAAACCCTAAAAACCGATGGCCCAAATAGGGCCAAGGAAAAAGAACTTGATAGCTTTTGTCATTTTACCCTAAGTTGAGGTTAGGTGAACCAAGTTAACCGAGGAGATAGCCTAGGAAAGTCAATGACTTAGGAACGAGATTTCTAAGTACGACTAAGATACCGAATGAACGAACAAACTAATGATATAAGACTTAAGAACGAACTAAGAAGCTATAAACAAACTACTTCCTGAGTATTCTTATACTCATTCATGCTATTTTAATCTTCTCAAGTGAGTGCTAGATGGAGCAGTTGAGGCGAGGGTGTACGCTTTAGGGGTTCAAAATAGATCAATGTCTTGTACTTCTCAAATCCTTATGTTACATCTGTCATTTCGATATTGTGCCCAATTGTATTACGAATGCTCTGACGTCCTGATGTTTTAAATGAATGTACTGTTTGATTTGATATTCATTAAATGCACGCACGTTTTAAAAGTTTTAGTTTATCTTATACTTTCAAATACTCAATATCGGTTAGTGACGGCCCGTGGCTCGAGTCTCTCAAGTAAGCCACAAAACATATAATAAAAGAAATAGTTCCATTTCATGTGATCATATATTGATTACAGTTTCAGAGTGCCATTCATTGACATTCTGAAAAGAATTGTTCTTGAATTTCCTACAACATTCTAGTATAAGTTCATAAATGAATCAAGAAACAAGAAAAAAAAAATTCAAAACTTGGTGAATTTTCCTTCTCCTCTTAAAGAGATTTGCAATCTCGAAGTGAGATCGAGAAAGGCATCTTCGTTGCAAGGAATTGTTAGACCACCGTGAGGATGATGAAATCCGAACTCTTCCTCGGCATGTTTGAGCAGCTGCTGGAATGAAGGATGATTCAAGTATGATATTGGAACTACGAACCGTTTCCTTTGTATCGCTCCCACGTAAACTGCTATGTGACCTTTTGGAACATATAGCGGATTTCTGGGGAAGTTTGAACGAACTTGTAGAAATTTCTTGACTTGAAGAATCCAGAATGGCAAATAAATCCCCATTATTAAGCTTGCCTGTTAAAGGTTTGAATTTGATTGGCGTAGAACCAACTTGAAGAGAATGAAAATGAATGTGTTTGAGTTTAATTTGGAGTTGAAACTGACTTGATATCCACATATATATAGTCTTGAAAGAAAATAGTTTTGTAGGTGGTTGGTGCTTTTCCATTGGGCTATTTAAGGTTAGTGTCGAGGTATCTAACCGTTCAAGTCCGCCGCTAACAGACATTATCAACTTTGACTCGTTACGTGTTGCTATCAGCCTTACGGTTTTAAAATGCATCTGTTAGGGAGAGGTTTTTACACCCTTATAAAGAATGTTTCGTTCCCTCTCCAACCGATGTGGGATCTCACAGTCCACCCCCTTGAGGGCCTAGCGTCCTTTCTGGTACACTACCCAAGCCTACCACTAACAGACATTATCCGCTTTGGCCCCTCACGATTTTAAAACCATCTGTTGGGAGAGGTCTTCACACCCTTATAAGGAATACTTCGTTCCCCTCTCCACCCGATGTGGTATCTCACAATCCACTCTCTTTGGGGGGCCTAGCGTCCTCGCCAACATGATACCATTTGCAATAGTCCAAACTCACTGTTGGTGTTATCCGTTTTGACCTGTTACATATCACACTTAACCTCACAATTTTAAAACATGTCTGTTAAAAGAGGTTTTCACACCTTCATAAGGAATGTTTTGTTCCTCTTTTTGACTCTACTTAGGATTGCCCGACTCACTCGACTCAGACATGATCTTTCTCCTATCTTTCTTATTTGTATCTGCCGTCATCCCAGCTTTTTGATTCAGGTAAACAGCACTGAATTCCTGAAGGAAGAACGCACTAGATGGGAAAAGAAAGAACATGATATGAGTGAGATTCGCTTTCACTGCTACAGAAAATGTTGCATCATTGGATAGTCCTGGTTGGATAGGTAGGAGAGGCACCAAATGCATTGAATTGCCGTACAGGTCATTTTAAGGATAAAATCGTGTTCTTTCTTTGTGAAATGTAGTTGCTGAATCCAACTTTCAACAACTTCTGTAATTGGAACCAGCTGTTTACCAACATGAACAAACTCATGATACTAAAACCGTCCTTTTCTATGAACAGTGCCCAAACATTATCCCGTTTGATCTTGCTGACATGGTTGCAATGGTCGCCAATCATAGCTACGATTGATATCACTCAAATGAAATTGATATCCATCTGTGATATGTTAATGATATTGATATCCATCTGTGATATGATTAATGATATCATATCAGTATATAGAAGATATATTATTGATATACTTCATATACTGTGTATAGCTTAACTGATGAAAGGAAATATATAATTTAAGAAATGGAGTATTATAGTTTCGTTCGTATTACTTTTGAAAGTTCATGCATTTTTTGAAACGTGATAGATATTAAAGATTTGTTCTTGTGGTATTGAGATTCGTTCGTATTACTTTTGAAAGTTTATGGTTATTAGTTGAACACGATTCTTCACAATGGTATGATATTTTTCACTTTGAGCATAAGCTCTCGTACTAATGGAGATAGTATTATTTGATTATAGACCCATGATATTCTCTAAATTAGCGGATGTGAGACTTTCATCCAACCATGGATTTTTTAAAACATGGTATTAAAGATTCGTTCGAATTATTTGGAAAGTTTATGGCTTTTTAAAAAATAATTTTTAATTTTTAAAGAAGTTTAGAACTTCGAAGTTCAAGCACTTGACAACGAACCCAAGGCCTGAAGAGACCATGTTCTGGAATCTGCAGCTTGTCCGATTAATACGACGGAAAGGGGTTTCCATGAGGTTATAG ATGCCAAGCAAATTGTCAAAATGCAGACCGTTCCATCTAGAAATCAATGTAGCGTTCCCAAAGGCTATATTGCAGTCTATGTGGGAGATACTGAAAGGAGACGGTTCATGGTTCCAATATCAAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGTAGAGAAGATAAGTTTAGAACTTCGAAGTTCAAGCACTTGACAACGAACCCAAGGCCTGAAGAGACCATGTTCTGGAATCTGCAGCTTGTCCGATTAATACGACGGAAAGGGGTTTCCATGAGGTTATAG ATGCCAAGCAAATTGTCAAAATGCAGACCGTTCCATCTAGAAATCAATGTAGCGTTCCCAAAGGCTATATTGCAGTCTATGTGGGAGATACTGAAAGGAGACGGTTCATGGTTCCAATATCAAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGTAGAGAAGATAAGTTTAGAACTTCGAAGTTCAAGCACTTGACAACGAACCCAAGGCCTGAAGAGACCATGTTCTGGAATCTGCAGCTTGTCCGATTAATACGACGGAAAGGGGTTTCCATGAGGTTATAG
BLAST of CmoCh20G007950 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-06 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1
BLAST of CmoCh20G007950 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-06 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 1
BLAST of CmoCh20G007950 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.6e-06 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
BLAST of CmoCh20G007950 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.6e-06 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
BLAST of CmoCh20G007950 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.6e-06 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
BLAST of CmoCh20G007950 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.0e-07 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 1
BLAST of CmoCh20G007950 vs. TAIR10
Match: AT3G03820.1 (AT3G03820.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 53.9 bits (128), Expect = 6.9e-08 Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 1
BLAST of CmoCh20G007950 vs. TAIR10
Match: AT2G21200.1 (AT2G21200.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 53.9 bits (128), Expect = 6.9e-08 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 1
BLAST of CmoCh20G007950 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
BLAST of CmoCh20G007950 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 1
BLAST of CmoCh20G007950 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 52.4 bits (124), Expect = 2.0e-07 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
BLAST of CmoCh20G007950 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 62.0 bits (149), Expect = 7.2e-07 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 1
BLAST of CmoCh20G007950 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 7.2e-07 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |