CmoCh20G007930 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G007930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr20 : 3930682 .. 3930924 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACCGTTTCGCCTAGAAATCAATGTGGCGTTCCCAAAGGTCATATTGCAGTCTATGTGGGGGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAATCATCCGTCTTTCTCAGCTTTGCTCGAGACTGCAGAAGAAGAATTTGGATTTAAACATCCAACGGGAGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCACATCCAGGCTGCAAACGTCCTGA

mRNA sequence

ATGCAGACCGTTTCGCCTAGAAATCAATGTGGCGTTCCCAAAGGTCATATTGCAGTCTATGTGGGGGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAATCATCCGTCTTTCTCAGCTTTGCTCGAGACTGCAGAAGAAGAATTTGGATTTAAACATCCAACGGGAGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCACATCCAGGCTGCAAACGTCCTGA

Coding sequence (CDS)

ATGCAGACCGTTTCGCCTAGAAATCAATGTGGCGTTCCCAAAGGTCATATTGCAGTCTATGTGGGGGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAATCATCCGTCTTTCTCAGCTTTGCTCGAGACTGCAGAAGAAGAATTTGGATTTAAACATCCAACGGGAGGATTGACAATTCCTTGCAGAGAAGATGTGTTCATCAACCTCACATCCAGGCTGCAAACGTCCTGA

Homology

[Close]

BLAST of CmoCh20G007930 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.4e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 73 LTSRLQ 79
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh20G007930 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.2e-23
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 73 LTSRLQ 79
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh20G007930 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.4e-23
Identity = 47/66 (71.21%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 73 LTSRLQ 79
          +TSR Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of CmoCh20G007930 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-22
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGLTIPCPEDTFIN 84

Query: 73 LTSRLQ 79
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh20G007930 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-22
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 73 LTSRLQ 79
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of CmoCh20G007930 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-36
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          M TVS RNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALL++AEEEFGFKHPTGG
Sbjct: 18 MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPCREDVFINLTSRLQ S
Sbjct: 78 LTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CmoCh20G007930 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-28
Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 1   MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
           MQ +S RNQ  VPKGHIAVYVG+I+RKRFVVPISYL HPSF  LL  +EEEFGF HP GG
Sbjct: 126 MQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGG 185

Query: 61  LTIPCREDVFINLTSRLQTS 81
           LTIPCRED FINLT+RL TS
Sbjct: 186 LTIPCREDAFINLTARLHTS 205

[Close]

BLAST of CmoCh20G007930 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-28
Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          MQ+VS R    +PKGHIAVYVG+IERKRFVVP+SYLNHP+F +LL  AEEEFGF HP+GG
Sbjct: 18 MQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLSLLNRAEEEFGFNHPSGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPC+ED FI+LTS+L TS
Sbjct: 78 LTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CmoCh20G007930 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.7e-28
Identity = 61/80 (76.25%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          MQ +S RNQ  VPKGHIAVYVG+I+RKRFVVPISYL +PSF  LL  +EEEFGF HP GG
Sbjct: 18 MQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEEFGFCHPMGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPCRED FINLT+RL TS
Sbjct: 78 LTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh20G007930 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.7e-28
Identity = 61/80 (76.25%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          MQ +S RNQ  VPKGHIAVYVG+I+RKRFVVPISYL +PSF  LL  +EEEFGF HP GG
Sbjct: 18 MQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEEFGFCHPMGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPCRED FINLT+RL TS
Sbjct: 78 LTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh20G007930 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-24
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 8  NQCGVPKGHIAVYVGDI-ERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCR 67
          N   +PKGH+AVYVG++ +++RFVVP++YL+HP F  LL  AEEEFGF HP GGLTIPC 
Sbjct: 24 NNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPCT 83

Query: 68 EDVFINLTSRLQTS 81
          E +FI+L SRL TS
Sbjct: 84 EQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh20G007930 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-24
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 73 LTSRLQ 79
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh20G007930 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-24
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 13 PKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCREDVFIN 72
          PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 73 LTSRLQ 79
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh20G007930 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 2.3e-24
Identity = 51/71 (71.83%), Postives = 59/71 (83.10%), Query Frame = 1


Query: 12  VPKGHIAVYVGD---IERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLTIPCRED 71
           VPKGH+AVYVG+   +E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+
Sbjct: 35  VPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREE 94

Query: 72  VFINL-TSRLQ 79
           VF++L  SRLQ
Sbjct: 95  VFLDLIASRLQ 105

[Close]

BLAST of CmoCh20G007930 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.8 bits (268), Expect = 3.1e-24
Identity = 49/71 (69.01%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 5  SPRNQCGVPKGHIAVYVGDI--ERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGGLT 64
          S + Q  VPKGH+AVYVG+    +KRFVVPISYLNHPSF  LL  AEEEFGF HP GGLT
Sbjct: 14 SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGLT 73

Query: 65 IPCREDVFINL 74
          IPCRE+ F+ L
Sbjct: 74 IPCREETFVGL 84

[Close]

BLAST of CmoCh20G007930 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-36
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          M TVS RNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALL++AEEEFGFKHPTGG
Sbjct: 18 MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPCREDVFINLTSRLQ S
Sbjct: 78 LTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CmoCh20G007930 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-36
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          M TVS RNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALL++AEEEFGFKHPTGG
Sbjct: 18 MHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPCREDVFINLTSRLQ S
Sbjct: 78 LTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CmoCh20G007930 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28
Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 1   MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
           MQ +S RNQ  VPKGHIAVYVG+I+RKRFVVPISYL HPSF  LL  +EEEFGF HP GG
Sbjct: 126 MQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGG 185

Query: 61  LTIPCREDVFINLTSRLQTS 81
           LTIPCRED FINLT+RL TS
Sbjct: 186 LTIPCREDAFINLTARLHTS 205

[Close]

BLAST of CmoCh20G007930 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28
Identity = 62/80 (77.50%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          MQ +S RNQ  VPKGHIAVYVG+I+RKRFVVPISYL HPSF  LL  +EEEFGF HP GG
Sbjct: 18 MQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPCRED FINLT+RL TS
Sbjct: 78 LTIPCREDAFINLTARLHTS 97

[Close]

BLAST of CmoCh20G007930 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-28
Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = 1


Query: 1  MQTVSPRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLETAEEEFGFKHPTGG 60
          MQ+VS R    +PKGHIAVYVG+IERKRFVVP+SYLNHP+F +LL  AEEEFGF HP+GG
Sbjct: 18 MQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLSLLNRAEEEFGFNHPSGG 77

Query: 61 LTIPCREDVFINLTSRLQTS 81
          LTIPC+ED FI+LTS+L TS
Sbjct: 78 LTIPCKEDAFIDLTSKLHTS 97

The following BLAST results are available for this feature:

BLAST of CmoCh20G007930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	2.4e-23	71.21	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	4.2e-23	69.70	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU20_ARATH	5.4e-23	71.21	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU19_ARATH	1.2e-22	69.70	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU21_ARATH	1.2e-22	69.70	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmoCh20G007930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71_CUCSA	1.0e-36	92.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	1.0e-28	77.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	1.8e-28	73.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	6.7e-28	76.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LM74_CUCSA	8.7e-28	76.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]

BLAST of CmoCh20G007930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	1.4e-24	63.51	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.4e-24	71.21	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	2.3e-24	69.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.3e-24	71.83	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	3.1e-24	69.01	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh20G007930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458562\|ref\|XP_004147016.1\|	1.5e-36	92.50	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115600\|ref\|XP_008457637.1\|	1.5e-36	92.50	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206766\|gb\|KGN61885.1\|	1.5e-28	77.50	hypothetical protein Csa_2G258810 [Cucumis sativus]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	1.5e-28	77.50	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	2.5e-28	73.75	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G007930.1	CmoCh20G007930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 9..76 score: 6.4
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 5..80 score: 6.7
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 5..80 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G007930	CsaV3_2G015560	Cucumber (Chinese Long) v3	cmocucB0637

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh20G007930	CmoCh02G003410	Cucurbita moschata (Rifu)	cmocmoB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G007930	Melon (DHL92) v3.6.1	cmomedB559
CmoCh20G007930	Cucumber (Chinese Long) v3	cmocucB0635
CmoCh20G007930	Watermelon (97103) v2	cmowmbB544
CmoCh20G007930	Wax gourd	cmowgoB0673
CmoCh20G007930	Wax gourd	cmowgoB0679
CmoCh20G007930	Cucurbita moschata (Rifu)	cmocmoB416
CmoCh20G007930	Cucumber (Gy14) v1	cgycmoB0482
CmoCh20G007930	Cucumber (Gy14) v1	cgycmoB1051
CmoCh20G007930	Cucumber (Gy14) v1	cgycmoB1052
CmoCh20G007930	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G007930	Cucurbita maxima (Rimu)	cmacmoB606
CmoCh20G007930	Wild cucumber (PI 183967)	cmocpiB536
CmoCh20G007930	Wild cucumber (PI 183967)	cmocpiB567
CmoCh20G007930	Cucumber (Chinese Long) v2	cmocuB531
CmoCh20G007930	Cucumber (Chinese Long) v2	cmocuB561
CmoCh20G007930	Melon (DHL92) v3.5.1	cmomeB484
CmoCh20G007930	Melon (DHL92) v3.5.1	cmomeB503
CmoCh20G007930	Watermelon (Charleston Gray)	cmowcgB476
CmoCh20G007930	Watermelon (97103) v1	cmowmB534
CmoCh20G007930	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G007930	Cucurbita pepo (Zucchini)	cmocpeB521
CmoCh20G007930	Cucurbita pepo (Zucchini)	cmocpeB534
CmoCh20G007930	Bottle gourd (USVL1VR-Ls)	cmolsiB489
CmoCh20G007930	Bottle gourd (USVL1VR-Ls)	cmolsiB491
CmoCh20G007930	Cucumber (Gy14) v2	cgybcmoB209