CmoCh20G007910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G007910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr20 : 3925817 .. 3926110 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTCGCAGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATTTTACCTAAACCATCCATCGTTCCAGCAATTGCTCAGCCACGCAGAGGAGAAGTTTGGGTTCCATCATCCACATGGAGGCCTAACAATTCCTTGCAAAGAAGACGCCTTTATCCATCTCACTTCTAGACTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTCGCAGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATTTTACCTAAACCATCCATCGTTCCAGCAATTGCTCAGCCACGCAGAGGAGAAGTTTGGGTTCCATCATCCACATGGAGGCCTAACAATTCCTTGCAAAGAAGACGCCTTTATCCATCTCACTTCTAGACTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTCGCAGTTTATGTGGGAGAGTTCCAAAGGAAGCGGTTTGTGGTTCCAATATTTTACCTAAACCATCCATCGTTCCAGCAATTGCTCAGCCACGCAGAGGAGAAGTTTGGGTTCCATCATCCACATGGAGGCCTAACAATTCCTTGCAAAGAAGACGCCTTTATCCATCTCACTTCTAGACTGCAAGTATCTTGA

Homology

[Close]

BLAST of CmoCh20G007910 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +EE+FGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFIHLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh20G007910 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.5e-22
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 1


Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPI YLN PSFQ LLS +EE+FGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIHLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh20G007910 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 19 QSGFTKNQ-----LDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHH 78
          ++ F+ NQ     +DV KG++AVYVGE + +RFV+P+ YLN PSFQ LLS AEE+FG+HH
Sbjct: 10 KASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHH 69

Query: 79 PHGGLTIPCKEDAFIHLTSRL 95
          P+GGLTIPC ED F H+TS L
Sbjct: 70 PNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of CmoCh20G007910 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 30 PKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIH 89
          PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +E++FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh20G007910 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 1


Query: 30 PKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIH 89
          PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of CmoCh20G007910 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.0e-44
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGE QRKRFVVPI YLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LLSHAEE+FGFHHPHGGLTIPCKEDAF+ LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh20G007910 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.8e-42
Identity = 83/97 (85.57%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LL HAEE+FGFHHP GGLTIPCKEDAF  +TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh20G007910 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.3e-41
Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGE QRKRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LL+H+EE+FGFHHP G LTIPCKEDAFI LTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh20G007910 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-40
Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MG+  L LVPHAK+ILKMQS FTKNQLDVPKGHVAVYVGE QRKRFVVP+ YLN PSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LLS AEE+FGFHHPHGGLTIPCKEDAF+ LTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CmoCh20G007910 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.0e-39
Identity = 82/97 (84.54%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGE Q KRFVVPI YLN  SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LLS+AEE+FGFHHP GGLTIPCKEDAF+ LTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CmoCh20G007910 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEF-QRKRFVVPIFYLNHPSFQ 60
          M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE  Q++RFVVP+ YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          +LL  AEE+FGF HP GGLTIPC E  FI L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh20G007910 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVGE---FQRKRFVVPIF 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE    ++KRFVVPI 
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHL-TSRLQ 96
           +LNHPSF++ LS AEE+FGF+HP GGLTIPC+E+ F+ L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh20G007910 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-25
Identity = 55/97 (56.70%), Postives = 68/97 (70.10%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHP 60
          M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+ YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSR 94
          SFQ LL  AEE+FGF HP GGLTIPC E+ FI L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh20G007910 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.8 bits (268), Expect = 3.7e-24
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1


Query: 7   SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-FQRKRFVVPIFYLN 66
           S++P+AKQI K QS   KN              VPKGHVAVYVGE  ++KRFVVPI YLN
Sbjct: 6   SMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLN 65

Query: 67  HPSFQQLLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQV 97
           HP F++ L+ AEE+ GFHH  GGLTIPC+E++F++L +  Q+
Sbjct: 66  HPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of CmoCh20G007910 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-23
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQLLSHAEEKFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+ YLN PSFQ LLS +EE+FGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFIHLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh20G007910 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGE QRKRFVVPI YLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LLSHAEE+FGFHHPHGGLTIPCKEDAF+ LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh20G007910 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-43
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIR LSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGE Q KRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LLS+AEE+FGFHHP GGLTIPCKED F+ LTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CmoCh20G007910 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-42
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKN+L+VPKGHVAVYVGE QRKRFVVPI YLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LL+ AEE+FGFHHPHGGLTIPCKEDAF+ LTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh20G007910 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 83/97 (85.57%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGE QRKRFVVPI YLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LL HAEE+FGFHHP GGLTIPCKEDAF  +TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh20G007910 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEFQRKRFVVPIFYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGE QRKRFVVPI YLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPHGGLTIPCKEDAFIHLTSRLQVS 98
          LL+H+EE+FGFHHP G LTIPCKEDAFI LTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of CmoCh20G007910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.9e-22	61.90	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	9.5e-22	63.29	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
AX6B_SOYBN	1.2e-21	60.49	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
SAU22_ARATH	2.1e-21	69.70	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	3.6e-21	70.77	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmoCh20G007910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	8.0e-44	89.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	9.8e-42	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	8.3e-41	83.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	1.1e-40	83.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	2.0e-39	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of CmoCh20G007910 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	2.0e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	7.5e-25	55.24	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	9.7e-25	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	3.7e-24	53.92	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.1e-23	61.90	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh20G007910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206757\|gb\|KGN61876.1\|	1.2e-43	89.69	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	5.7e-43	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	2.2e-42	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	1.4e-41	85.57	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	1.2e-40	83.51	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G007910.1	CmoCh20G007910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 1.4
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.3
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G007910	Wax gourd	cmowgoB0673
CmoCh20G007910	Wax gourd	cmowgoB0679
CmoCh20G007910	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh20G007910	Cucurbita moschata (Rifu)	cmocmoB416
CmoCh20G007910	Cucumber (Gy14) v1	cgycmoB0482
CmoCh20G007910	Cucumber (Gy14) v1	cgycmoB1051
CmoCh20G007910	Cucumber (Gy14) v1	cgycmoB1052
CmoCh20G007910	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G007910	Cucurbita maxima (Rimu)	cmacmoB606
CmoCh20G007910	Wild cucumber (PI 183967)	cmocpiB536
CmoCh20G007910	Wild cucumber (PI 183967)	cmocpiB567
CmoCh20G007910	Cucumber (Chinese Long) v2	cmocuB531
CmoCh20G007910	Cucumber (Chinese Long) v2	cmocuB561
CmoCh20G007910	Melon (DHL92) v3.5.1	cmomeB484
CmoCh20G007910	Melon (DHL92) v3.5.1	cmomeB503
CmoCh20G007910	Watermelon (Charleston Gray)	cmowcgB476
CmoCh20G007910	Watermelon (97103) v1	cmowmB534
CmoCh20G007910	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G007910	Cucurbita pepo (Zucchini)	cmocpeB521
CmoCh20G007910	Cucurbita pepo (Zucchini)	cmocpeB534
CmoCh20G007910	Bottle gourd (USVL1VR-Ls)	cmolsiB489
CmoCh20G007910	Bottle gourd (USVL1VR-Ls)	cmolsiB491
CmoCh20G007910	Cucumber (Gy14) v2	cgybcmoB209
CmoCh20G007910	Melon (DHL92) v3.6.1	cmomedB559
CmoCh20G007910	Cucumber (Chinese Long) v3	cmocucB0635
CmoCh20G007910	Cucumber (Chinese Long) v3	cmocucB0637
CmoCh20G007910	Watermelon (97103) v2	cmowmbB544