CmoCh20G007300 (gene) Cucurbita moschata (Rifu)

NameCmoCh20G007300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionGag-Pol polyprotein
LocationCmo_Chr20 : 3619388 .. 3623333 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACACGATGAGTGATTTCCAAATCGTTGGAGGAATTAAGAAACTCAACAACAACAACTACAACACGTGGGCAACATGCATGATGTCCTATTTACAAGGACAGGATCTTTGGGAGATCGTTGGCGGGTGTGAAACTACGCCGCCAGAGGAGGATTCTAACGACGCCTTGCGCAAATGGAGAATCAAAGCAGGCAAAGCAATGTTTGCCTTGAAGACCACCATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACATTCGTGATGTTGTTCTCAAAGAAGAATGATACGAGGCTACAACTTCTGGAGAATGAGTTGTTGTCAATTTCACAACGTGATATGACGATTGCTCAGTACTTCCACAAGGTCAAATCGATCTGTCGGGAGATTACTGAACTAGACCCAAAGTCCGCCATTGTAGAATCTCGAATGAAGAGGATTATAATCCACGGATTGCGACCAGAATATCGAAGCTTCATTGCTGCTGTACAAGGATGGCCCACTCAACCATCACTGGTAGAGTTCGAAAATTTGTTAGCCAGCCAAGAAGCCATGGCTAAACAAATGGGAGGCTTCACATTGAAGGGTGAAGAAGCACTCTACACGAGTGAAAGTCAGAGCAATAATAGGCCGTCTACCAGACGTGGATACAATGGTGACAAAAGAAGAAGCCACCAAGGGATTGCACAACCTGAGAGAGCTCAGAAGAACGACAACAAGAGTTTTCAAAGAACGAGATTTGGTGGTATTTGCTATAACTGCGGGAAAAAGGGCCATATGTCTAGAGATTGTTGGTCCAGGAAAAAGTCCATTGAAAACAATGTGGCAATATCCAAAAAGAAGATAGAAGATGAATGGGATGCAGAGGTACTATGTCCCATAGAAGAAGACGAGCTAGCACTCATGGCGACAATGGAAGACCATATCAACTATGAGAATGACTGGATCGTTGATTCAGGATGTTCAAATCATGCCTGGCAATAAGTCTGATACAGTGTCGCTACATAATGTTTATCATGTACCGGGTATAAAGAAGAACTTGTTGTCAGTGTCACAACTAACAACATCAGGAAGCTATGTCTTGTTTGGGCCAGAAGATGTAAAAGTTTATCAAGATGTTAAGATAATAGGAAAGCCGACGATAGAAGGACGAAGAGTGGAGTCTGTCTACGTTCTATCTGCAGAGTCTGCCTATGTTGACAAGACCCGGAAGAATGAGACGACAGATCTATGGCATGCAAGATTGGGACATATTAGCTACCATAAGTTGAAGCTGATTATGGAGAAATCTATGCTCAAAGGTCTACCACAACTGGAAGTCAAAACAGACGTTGTCTGCGCTGGATGTCAGTATGGTAAAGCTCATCAATTACCATACAAAGAGTCAAGTTTCAAAGCAAAGAAACCATTAGAGTTAGTTCACTCTGATTTGTTCGGCCCAGTCAAACAAGCATCGATCAGCGGAATGCGGTATATGGTGACATTTATTGACGACTACTCAAGATATGTGTGGATTTTCTTTATGAAAGAAAAGTCTGACACGTTCTCAAAGTTTCAAGAATTCAAGATGATGGTCGAAGGAGAAGTAGGAGCGAAGATTCGTTGTCTACGTTCAGACAATGGCGGAGAATACACGTCAGATGAGTTCGATCAATATTTACACGAGTGTGGGATACGACGTCAATTTACATGTGCCAACACGCCACAACAAAATGGTGTAGCAGAAAGAAAGAATCGACACCTTGCAGAAACCTGTCGAAGCATGTTACACGCAAAGAACGTTCCAGGAAGATTTTGGGCTGAAGCTATGCGAACTGCTGCCCATGTGATCAACAAGCTTCCTCAACCAAAGCTAGGGTTCGTCTCACCATTTGAGATACTATGGGATATGAAACCTACAATTAGTTACTTCCGAGTATTTGGCTGTGTTTGCTATGTATTTGTGCCTGACCATCTACGTAGCAAGTTTGACAAGAAAGCAGTCAAGTGTGTATTTGTTGGATACGACAATCAAAGAAAAGGATGGAGGTGCTGTGATCCAACAAGTGGAAAATACTATACATCAAGAGATGTAGTTTTTGATGAAGCATCTACATGGTGGTCCTCGGAGAAGAAAGTCTTATCAGATTCAAACATTGAAGAAATTCTACAACAGAAGCTGGGGGAGCAAACTACACAAATTCAATCAAATGTCGATGCATCTGAAAATCCAAGCGACATTGATATTGACAAGCAGGAGGTGACTCAATCAAGCGAATCTGATAAAAATGAAACAACACATCAACAACTTAGGCGATCAAATAGAATCCGAAGGCCAAATCCTAAGTATGCAAATGCAGCTATTGTAGAAGATAGAGTTTACGAACCAGAGACATATGAAGAAGCATCACAAAACTCGGTTTGGCAGAAAGCGATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTCGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCTTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTCATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTGTCAGCTCAACATGATGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGA

mRNA sequence

ATGGCCAACACGATGAGTGATTTCCAAATCGTTGGAGGAATTAAGAAACTCAACAACAACAACTACAACACGTGGGCAACATGCATGATGTCCTATTTACAAGGACAGGATCTTTGGGAGATCGTTGGCGGGTGTGAAACTACGCCGCCAGAGGAGGATTCTAACGACGCCTTGCGCAAATGGAGAATCAAAGCAGGCAAAGCAATGTTTGCCTTGAAGACCACCATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACATTCGTGATGTTGTTCTCAAAGAAGAATGATACGAGGCTACAACTTCTGGAGAATGAGTTGTTGTCAATTTCACAACGTGATATGACGATTGCTCAGTACTTCCACAAGGTCAAATCGATCTGTCGGGAGATTACTGAACTAGACCCAAAGTCCGCCATTGTAGAATCTCGAATGAAGAGGATTATAATCCACGGATTGCGACCAGAATATCGAAGCTTCATTGCTGCTGTACAAGGATGGCCCACTCAACCATCACTGGTAGAGTTCGAAAATTTGTTAGCCAGCCAAGAAGCCATGGCTAAACAAATGGGAGGCTTCACATTGAAGGGTGAAGAAGCACTCTACACGAGTGAAAGTCAGAGCAATAATAGGCCGTCTACCAGACGTGGATACAATGGTGACAAAAGAAGAAGCCACCAAGGGATTGCACAACCTGAGAGAGCTCAGAAGAACGACAACAAGAGTTTTCAAAGAACGAGATTTGGTGGTATTTGCTATAACTGCGGGAAAAAGGGCCATATGTCTAGAGATTGTTGGTCCAGGAAAAAGTCCATTGAAAACAATGTGGCAATATCCAAAAAGAAGATAGAAGATGAATGGGATGCAGAGGATGTTCAAATCATGCCTGGCAATAAGTCTGATACAGTGTCGCTACATAATGTTTATCATGTACCGGGTATAAAGAAGAACTTGTTGTCAGTGTCACAACTAACAACATCAGGAAGCTATGTCTTGTTTGGGCCAGAAGATGTAAAAGTTTATCAAGATGTTAAGATAATAGGAAAGCCGACGATAGAAGGACGAAGAGTGGAGTCTGTCTACGTTCTATCTGCAGAGTCTGCCTATGTTGACAAGACCCGGAAGAATGAGACGACAGATCTATGGCATGCAAGATTGGGACATATTAGCTACCATAAGTTGAAGCTGATTATGGAGAAATCTATGCTCAAAGGTCTACCACAACTGGAAGTCAAAACAGACGTTGTCTGCGCTGGATGTCAGTATGGTAAAGCTCATCAATTACCATACAAAGAGTCAAGTTTCAAAGCAAAGAAACCATTAGAGTTAGTTCACTCTGATTTGTTCGGCCCAGTCAAACAAGCATCGATCAGCGGAATGCGGTATATGGTGACATTTATTGACGACTACTCAAGATATGTGTGGATTTTCTTTATGAAAGAAAAGTCTGACACGTTCTCAAAGTTTCAAGAATTCAAGATGATGGTCGAAGGAGAAGTAGGAGCGAAGATTCGTTGTCTACGTTCAGACAATGGCGGAGAATACACGTCAGATGAGTTCGATCAATATTTACACGAGTGTGGGATACGACGTCAATTTACATGTGCCAACACGCCACAACAAAATGGTGTAGCAGAAAGAAAGAATCGACACCTTGCAGAAACCTGTCGAAGCATGTTACACGCAAAGAACGTTCCAGGAAGATTTTGGGCTGAAGCTATGCGAACTGCTGCCCATGTGATCAACAAGCTTCCTCAACCAAAGCTAGGGTTCGTCTCACCATTTGAGATACTATGGGATATGAAACCTACAATTAGTTACTTCCGAGTATTTGGCTGTGTTTGCTATGTATTTGTGCCTGACCATCTACGTAGCAAGTTTGACAAGAAAGCAGTCAAGTGTGTATTTGTTGGATACGACAATCAAAGAAAAGGATGGAGGTGCTGTGATCCAACAAGTGGAAAATACTATACATCAAGAGATGTAGTTTTTGATGAAGCATCTACATGGTGGTCCTCGGAGAAGAAAGTCTTATCAGATTCAAACATTGAAGAAATTCTACAACAGAAGCTGGGGGAGCAAACTACACAAATTCAATCAAATGTCGATGCATCTGAAAATCCAAGCGACATTGATATTGACAAGCAGGAGGTGACTCAATCAAGCGAATCTGATAAAAATGAAACAACACATCAACAACTTAGGCGATCAAATAGAATCCGAAGGCCAAATCCTAAGTATGCAAATGCAGCTATTGTAGAAGATAGAGTTTACGAACCAGAGACATATGAAGAAGCATCACAAAACTCGGTTTGGCAGAAAGCGATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTCGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCTTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTCATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTGTCAGCTCAACATGATGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGA

Coding sequence (CDS)

ATGGCCAACACGATGAGTGATTTCCAAATCGTTGGAGGAATTAAGAAACTCAACAACAACAACTACAACACGTGGGCAACATGCATGATGTCCTATTTACAAGGACAGGATCTTTGGGAGATCGTTGGCGGGTGTGAAACTACGCCGCCAGAGGAGGATTCTAACGACGCCTTGCGCAAATGGAGAATCAAAGCAGGCAAAGCAATGTTTGCCTTGAAGACCACCATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACATTCGTGATGTTGTTCTCAAAGAAGAATGATACGAGGCTACAACTTCTGGAGAATGAGTTGTTGTCAATTTCACAACGTGATATGACGATTGCTCAGTACTTCCACAAGGTCAAATCGATCTGTCGGGAGATTACTGAACTAGACCCAAAGTCCGCCATTGTAGAATCTCGAATGAAGAGGATTATAATCCACGGATTGCGACCAGAATATCGAAGCTTCATTGCTGCTGTACAAGGATGGCCCACTCAACCATCACTGGTAGAGTTCGAAAATTTGTTAGCCAGCCAAGAAGCCATGGCTAAACAAATGGGAGGCTTCACATTGAAGGGTGAAGAAGCACTCTACACGAGTGAAAGTCAGAGCAATAATAGGCCGTCTACCAGACGTGGATACAATGGTGACAAAAGAAGAAGCCACCAAGGGATTGCACAACCTGAGAGAGCTCAGAAGAACGACAACAAGAGTTTTCAAAGAACGAGATTTGGTGGTATTTGCTATAACTGCGGGAAAAAGGGCCATATGTCTAGAGATTGTTGGTCCAGGAAAAAGTCCATTGAAAACAATGTGGCAATATCCAAAAAGAAGATAGAAGATGAATGGGATGCAGAGGATGTTCAAATCATGCCTGGCAATAAGTCTGATACAGTGTCGCTACATAATGTTTATCATGTACCGGGTATAAAGAAGAACTTGTTGTCAGTGTCACAACTAACAACATCAGGAAGCTATGTCTTGTTTGGGCCAGAAGATGTAAAAGTTTATCAAGATGTTAAGATAATAGGAAAGCCGACGATAGAAGGACGAAGAGTGGAGTCTGTCTACGTTCTATCTGCAGAGTCTGCCTATGTTGACAAGACCCGGAAGAATGAGACGACAGATCTATGGCATGCAAGATTGGGACATATTAGCTACCATAAGTTGAAGCTGATTATGGAGAAATCTATGCTCAAAGGTCTACCACAACTGGAAGTCAAAACAGACGTTGTCTGCGCTGGATGTCAGTATGGTAAAGCTCATCAATTACCATACAAAGAGTCAAGTTTCAAAGCAAAGAAACCATTAGAGTTAGTTCACTCTGATTTGTTCGGCCCAGTCAAACAAGCATCGATCAGCGGAATGCGGTATATGGTGACATTTATTGACGACTACTCAAGATATGTGTGGATTTTCTTTATGAAAGAAAAGTCTGACACGTTCTCAAAGTTTCAAGAATTCAAGATGATGGTCGAAGGAGAAGTAGGAGCGAAGATTCGTTGTCTACGTTCAGACAATGGCGGAGAATACACGTCAGATGAGTTCGATCAATATTTACACGAGTGTGGGATACGACGTCAATTTACATGTGCCAACACGCCACAACAAAATGGTGTAGCAGAAAGAAAGAATCGACACCTTGCAGAAACCTGTCGAAGCATGTTACACGCAAAGAACGTTCCAGGAAGATTTTGGGCTGAAGCTATGCGAACTGCTGCCCATGTGATCAACAAGCTTCCTCAACCAAAGCTAGGGTTCGTCTCACCATTTGAGATACTATGGGATATGAAACCTACAATTAGTTACTTCCGAGTATTTGGCTGTGTTTGCTATGTATTTGTGCCTGACCATCTACGTAGCAAGTTTGACAAGAAAGCAGTCAAGTGTGTATTTGTTGGATACGACAATCAAAGAAAAGGATGGAGGTGCTGTGATCCAACAAGTGGAAAATACTATACATCAAGAGATGTAGTTTTTGATGAAGCATCTACATGGTGGTCCTCGGAGAAGAAAGTCTTATCAGATTCAAACATTGAAGAAATTCTACAACAGAAGCTGGGGGAGCAAACTACACAAATTCAATCAAATGTCGATGCATCTGAAAATCCAAGCGACATTGATATTGACAAGCAGGAGGTGACTCAATCAAGCGAATCTGATAAAAATGAAACAACACATCAACAACTTAGGCGATCAAATAGAATCCGAAGGCCAAATCCTAAGTATGCAAATGCAGCTATTGTAGAAGATAGAGTTTACGAACCAGAGACATATGAAGAAGCATCACAAAACTCGGTTTGGCAGAAAGCGATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTCGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCTTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTCATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTGTCAGCTCAACATGATGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGA
BLAST of CmoCh20G007300 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.1e-197
Identity = 398/991 (40.16%), Postives = 594/991 (59.94%), Query Frame = 1

Query: 307  NKSDTVSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVKIIGKPTIEGRRV 366
            N   T+ L +V HVP ++ NL+S   L   G    F  +  ++ +   +I K    G   
Sbjct: 343  NVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARG--- 402

Query: 367  ESVYVLSAE--SAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLPQLEVKTDV 426
             ++Y  +AE     ++  +   + DLWH R+GH+S   L+++ +KS++       VK   
Sbjct: 403  -TLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP-- 462

Query: 427  VCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVTFIDDYSRYVW 486
             C  C +GK H++ ++ SS +    L+LV+SD+ GP++  S+ G +Y VTFIDD SR +W
Sbjct: 463  -CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLW 522

Query: 487  IFFMKEKSDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLHECGIRRQFTC 546
            ++ +K K   F  FQ+F  +VE E G K++ LRSDNGGEYTS EF++Y    GIR + T 
Sbjct: 523  VYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTV 582

Query: 547  ANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLPQPKLGFVSPF 606
              TPQ NGVAER NR + E  RSML    +P  FW EA++TA ++IN+ P   L F  P 
Sbjct: 583  PGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPE 642

Query: 607  EILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKGWRCCDPTSGK 666
             +  + + + S+ +VFGC  +  VP   R+K D K++ C+F+GY ++  G+R  DP   K
Sbjct: 643  RVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKK 702

Query: 667  YYTSRDVVFDEASTWWSSEKK-------------VLSDSNIEEILQQKLGEQTTQIQSNV 726
               SRDVVF E+    +++               + S SN     +    E + Q +   
Sbjct: 703  VIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPG 762

Query: 727  DASENPSDIDIDKQEVTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIV---EDRVYE 786
            +  E    +D   +EV   ++ ++    HQ LRRS R R  + +Y +   V   +DR  E
Sbjct: 763  EVIEQGEQLDEGVEEVEHPTQGEEQ---HQPLRRSERPRVESRRYPSTEYVLISDDR--E 822

Query: 787  PETYEEA---SQNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGS 846
            PE+ +E     + +   KAM+EE+ +L+ N T++LV      +P+ CKWV+K+K+  D  
Sbjct: 823  PESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCK 882

Query: 847  IERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHG 906
            + RYKARLV +GF Q+ G+D+DE FSPV K+T++R +L+LAAS D ++ Q+DVK AFLHG
Sbjct: 883  LVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHG 942

Query: 907  ELDREIYMNQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADS 966
            +L+ EIYM QP+GFE A   + VCKL K+LYGLKQAPR WY K   F+    Y   ++D 
Sbjct: 943  DLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDP 1002

Query: 967  SLFIKE-REGNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEV- 1026
             ++ K   E N  I+L+YVDD++I G D+  I + + +LS  F MK+LG  +  LG+++ 
Sbjct: 1003 CVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIV 1062

Query: 1027 -DRTDEGLFLCQQKYTRDMLQKFNMLECKQVSTP----MEINAKICAHEGKELND--ETT 1086
             +RT   L+L Q+KY   +L++FNM   K VSTP    ++++ K+C    +E  +  +  
Sbjct: 1063 RERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP 1122

Query: 1087 YRQLVGSLIY-LTLTRPDISYAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKR 1146
            Y   VGSL+Y +  TRPDI++AVGV+SR++++P K H +A + ILRY++GT    L +  
Sbjct: 1123 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1182

Query: 1147 SKDCKLVGYCDADYAGDHDTRRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAG 1206
            S D  L GY DAD AGD D R+S+TGY+F F  G ISW SK Q  V+LSTTEAEY AA  
Sbjct: 1183 S-DPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATE 1242

Query: 1207 AAQESTWLKLLMED--LHQKIDYPISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREK 1265
              +E  WLK  +++  LHQK +Y +   CD+QSAI L++N ++HARTKH++V YH+IRE 
Sbjct: 1243 TGKEMIWLKRFLQELGLHQK-EYVV--YCDSQSAIDLSKNSMYHARTKHIDVRYHWIREM 1302

BLAST of CmoCh20G007300 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 372.1 bits (954), Expect = 2.5e-101
Identity = 220/605 (36.36%), Postives = 350/605 (57.85%), Query Frame = 1

Query: 693  EEILQQKLGEQTTQIQSNVDASENPSDIDIDKQEVTQSSESDKNET----THQQLRRSNR 752
            ++ L +  G          + +E+  +I ID        E     +    T  Q+  +  
Sbjct: 813  DDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEE 872

Query: 753  IRRPNPKYANAAIVEDRVYEPETYEEAS---QNSVWQKAMEEEIIALEHNQTWELVPRLG 812
                N    NA  + + V  P +++E       S W++A+  E+ A + N TW +  R  
Sbjct: 873  DNSLNKVVLNAHTIFNDV--PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPE 932

Query: 813  DIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLAL 872
            +   V  +WV+ +K    G+  RYKARLVARGF+Q+Y +DY+ETF+PVA+I++ R +L+L
Sbjct: 933  NKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSL 992

Query: 873  AASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAANPNYVCKLRKALYGLKQAPRAW 932
                + K+ QMDVK AFL+G L  EIYM  P+G   + N + VCKL KA+YGLKQA R W
Sbjct: 993  VIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCW 1052

Query: 933  YGKIAEFLTQSGYSVAHADSSLFIKEREGNLT---IVLVYVDDLIITGDDEREIYQTREN 992
            +    + L +  +  +  D  ++I ++ GN+     VL+YVDD++I   D   +   +  
Sbjct: 1053 FEVFEQALKECEFVNSSVDRCIYILDK-GNINENIYVLLYVDDVVIATGDMTRMNNFKRY 1112

Query: 993  LSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQKFNMLECKQVSTPM--EIN 1052
            L  +F+M +L E+KHF+G+ ++  ++ ++L Q  Y + +L KFNM  C  VSTP+  +IN
Sbjct: 1113 LMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKIN 1172

Query: 1053 AKICAHEGKELNDETTYRQLVGSLIYLTL-TRPDISYAVGVMSRYMQSPKKPHLDAARRI 1112
             ++      + +  T  R L+G L+Y+ L TRPD++ AV ++SRY            +R+
Sbjct: 1173 YELL---NSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1232

Query: 1113 LRYIKGTIDYGLLYKRSK--DCKLVGYCDADYAGDHDTRRSTTGYVFK-FGSGTISWCSK 1172
            LRY+KGTID  L++K++   + K++GY D+D+AG    R+STTGY+FK F    I W +K
Sbjct: 1233 LRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTK 1292

Query: 1173 RQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQSAIRLAENPVF 1232
            RQ +V+ S+TEAEY A   A +E+ WLK L+  ++ K++ PI +  DNQ  I +A NP  
Sbjct: 1293 RQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSC 1352

Query: 1233 HARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHESFRCQLNMMQRM 1282
            H R KH+++ YHF RE+V    I ++ I T++Q+AD+FTK L  ++    R +L ++Q  
Sbjct: 1353 HKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQDD 1409

BLAST of CmoCh20G007300 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-47
Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 1

Query: 959  VLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYT 1018
            +L+YVDD+++TG     +      LS  F MK+LG + +FLG+++     GLFL Q KY 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1019 RDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAV 1078
              +L    ML+CK +STP+ +         K   D + +R +VG+L YLTLTRPDISYAV
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1079 GVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRS 1138
             ++ + M  P     D  +R+LRY+KGTI +GL   ++    +  +CD+D+AG   TRRS
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1139 TTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTW 1183
            TTG+    G   ISW +KRQPTVS S+TE EYRA A  A E TW
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh20G007300 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 1.9e-45
Identity = 103/307 (33.55%), Postives = 160/307 (52.12%), Query Frame = 1

Query: 876  MDVKNAFLHGELDREIYMNQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQ 935
            MDV  AFL+  +D  IY+ QP GF +  NP+YV +L   +YGLKQAP  W   I   L +
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 936  SGYSVAHADSSLFIKEREGNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGEL 995
             G+     +  L+ +        + VYVDDL++     +   + ++ L+  + MK+LG++
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 996  KHFLGLEVDRTDEG-LFLCQQKYTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDE 1055
              FLGL + ++  G + L  Q Y      +  +   K   TP+  +  +       L D 
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1056 TTYRQLVGSLIYLTLT-RPDISYAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLY 1115
            T Y+ +VG L++   T RPDISY V ++SR+++ P+  HL++ARR+LRY+  T    L Y
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1116 KRSKDCKLVGYCDADYAGDHDTRRSTTGYVFKFGSGTISWCSKR-QPTVSLSTTEAEYRA 1175
            +      L  YCDA +   HD   ST GYV       ++W SK+ +  + + +TEAEY  
Sbjct: 241  RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300

Query: 1176 AAGAAQE 1180
            A+    E
Sbjct: 301  ASETVME 307

BLAST of CmoCh20G007300 vs. Swiss-Prot
Match: YJ41B_YEAST (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-31
Identity = 117/462 (25.32%), Postives = 220/462 (47.62%), Query Frame = 1

Query: 829  YKARLVARGFSQQYGLDYDETFSPVAKITT----VRVLLALAASKDWKLWQMDVKNAFLH 888
            YKAR+V RG +Q       +T+S +   +     +++ L +A +++  +  +D+ +AFL+
Sbjct: 1337 YKARIVCRGDTQS-----PDTYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLY 1396

Query: 889  GELDREIYMNQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHAD 948
             +L+ EIY+  P       +   V KL KALYGLKQ+P+ W   + ++L   G       
Sbjct: 1397 AKLEEEIYIPHPH------DRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYT 1456

Query: 949  SSLFIKEREGNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGEL------KHF 1008
              L+  + E    ++ VYVDD +I   +E+ + +    L   F++K  G L         
Sbjct: 1457 PGLY--QTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDI 1516

Query: 1009 LGLEV--DRTDEGLFLCQQKYTRDMLQKFN--MLECKQVSTPMEINAKICAHEGKELNDE 1068
            LG+++  ++    + L  + +   M +K+N  + + ++ S P     KI   +      E
Sbjct: 1517 LGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSE 1576

Query: 1069 TTYR-------QLVGSLIYLT-LTRPDISYAVGVMSRYMQSPKKPHLDAARRILRYIKGT 1128
              +R       QL+G L Y+    R DI +AV  ++R +  P +       +I++Y+   
Sbjct: 1577 EEFRQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRY 1636

Query: 1129 IDYGLLYKR--SKDCKLVGYCDADYAGDHDTRRSTTGYVFKFGSGTISWCSKRQPTVSLS 1188
             D G+ Y R  +KD K++   DA    ++D  +S  G +  +G    +  S +     +S
Sbjct: 1637 KDIGIHYDRDCNKDKKVIAITDASVGSEYDA-QSRIGVILWYGMNIFNVYSNKSTNRCVS 1696

Query: 1189 TTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQSAIRLAENPVFHARTKHVE 1248
            +TEAE  A      +S  LK+ +++L +  +  I ++ D++ AI+         + K   
Sbjct: 1697 STEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFTW 1756

Query: 1249 VHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHESF 1267
            +    I+EK+ ++ I++ +I     +ADL TK ++ S  + F
Sbjct: 1757 IKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFKRF 1784

BLAST of CmoCh20G007300 vs. TrEMBL
Match: A5AKW8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027864 PE=4 SV=1)

HSP 1 Score: 1641.3 bits (4249), Expect = 0.0e+00
Identity = 851/1351 (62.99%), Postives = 1002/1351 (74.17%), Query Frame = 1

Query: 5    MSDFQIVGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTPPE-EDSNDALRKWRI 64
            M D Q++GGIKKLNN NYNTW+TCMMSY+QGQDLWE+V G E T P+ ED+N  LRKW+I
Sbjct: 1    MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPKVEDANGILRKWKI 60

Query: 65   KAGKAMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKKNDTRLQLLENELLSISQRD 124
            KAGKAMFALKTTI E++LEHI D KTP EAW+TF  LFSKKNDTRLQLLE+EL S++QRD
Sbjct: 61   KAGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRD 120

Query: 125  MTIAQYFHKVKSICREITELDPKSAIVESRMKRIIIHGLRPEYRSFIAAVQGWPTQPSLV 184
            +TIAQYFHKVK++CREI+ELD ++ I E+ MKRIIIHGLRPE+R F+AA+QGW  QPSLV
Sbjct: 121  LTIAQYFHKVKTLCREISELDLEAPIGETXMKRIIIHGLRPEFRGFVAAIQGWQNQPSLV 180

Query: 185  EFENLLASQEAMAKQMGGFTLK-------------------------GEEALYTSESQSN 244
            EFENLLA QEA+AKQMGG +LK                          E+    S+ + +
Sbjct: 181  EFENLLAGQEALAKQMGGVSLKGEEEALYAHKGGWNSXQHTVRRTKKNEDKAKCSQGERS 240

Query: 245  NR-------PSTRRGYNGD----KRRSH--------QGIAQPERAQKNDNKSFQRTRF-- 304
             R       P T + + G      ++ H        +G+ +           +    F  
Sbjct: 241  ARVEGDSKNPGTXKKFEGKCYNCXKKGHMAKDCWSKKGLVESNATTSKSEDEWDAQAFFA 300

Query: 305  ----GGICYNCGKKGHMSRDCWSRKKSIENNVAISKKKIED--EWDAEDVQIMPGNK--- 364
                        ++    +D W       N++   K+K++D  E+    + +   N    
Sbjct: 301  AIGESAFIATTSEQIDYEKD-WIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTANNSKLP 360

Query: 365  --------------SDTVSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVK 424
                          ++ VSL NVYHVPG+KKNLLSV+QLT+SG  VLFGP+DVKVY D++
Sbjct: 361  IAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHSVLFGPQDVKVYHDLE 420

Query: 425  IIGKPTIEGRRVESVYVLSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKG 484
            ++ +P I+GRR+ESVYV+SAE+AYVDKTRKNET DLWH RL HISY KL ++M+KSMLKG
Sbjct: 421  VMEEPVIKGRRLESVYVMSAETAYVDKTRKNETADLWHMRLSHISYSKLTMMMKKSMLKG 480

Query: 485  LPQLEVKTDVVCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVT 544
            LPQLEV+   +CA CQYGKAHQLPY+ES +KAK PLEL+HSD+FGPVKQAS+SGM     
Sbjct: 481  LPQLEVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIHSDVFGPVKQASLSGM----- 540

Query: 545  FIDDYSRYVWIFFMKEKSDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLH 604
                  +Y+  F      D FS+    +M                    +TS E  +Y  
Sbjct: 541  ------KYMVTFI-----DDFSRRVYLQMSF------------------FTSSENXEYAI 600

Query: 605  ECGIRRQFTCANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLP 664
                   FTCANTPQQNGV ERKNRHLAE CRSMLHAKNVPG FWAE M+TAA VIN+LP
Sbjct: 601  S------FTCANTPQQNGVXERKNRHLAEICRSMLHAKNVPGXFWAEXMKTAAFVINRLP 660

Query: 665  QPKLGFVSPFEILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKG 724
            Q +L F SPFE LW++KPT+SYFRVFGCVCYVFVP+HLRSK DKKAV+CV VGYD+QRK 
Sbjct: 661  QQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCVLVGYDSQRKX 720

Query: 725  WRCCDPTSGKYYTSRDVVFDEASTWWSSEKKVLSDSNIEEILQQKLGEQTTQIQSNVDAS 784
            WRCCDPT+GK YTSR+VVFDE+S+WWSSEK++L DS+   + + +L  Q+ +IQ ++  +
Sbjct: 721  WRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSB---VFKDEL--QSARIQLSLGEA 780

Query: 785  ENPSDIDIDKQEVTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIVED-RVYEPETYE 844
            EN  D DI   + TQS      +T         R ++PNPKYAN AIVED    EP T+ 
Sbjct: 781  ENAXDGDIG-DDXTQSPW----QTGVHGQPSEERTKKPNPKYANVAIVEDANAKEPXTFA 840

Query: 845  EASQNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARL 904
            EA QNS W KAM EEI AL+ NQTWELVP+  D++P SCKWVYKIKRR DGSIER+KA L
Sbjct: 841  EAFQNSDWSKAMXEEIAALKRNQTWELVPKPRDVEPXSCKWVYKIKRRTDGSIERHKAXL 900

Query: 905  VARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYM 964
            VARGFSQQYGLDYDETFSPV K+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM
Sbjct: 901  VARGFSQQYGLDYDETFSPVXKLTTVRVLLALAANKDWDLWQMDVKNAFLHGELDREIYM 960

Query: 965  NQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKERE 1024
            NQP GF+S  +P YVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSV  ADSSLF+K   
Sbjct: 961  NQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPADSSLFVKANG 1020

Query: 1025 GNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLC 1084
            G L IVLVYVDDLIITGDD  EI++T+ENLS+RF+MKELG+LKHFLGLEVDRT+EG+FLC
Sbjct: 1021 GKLAIVLVYVDDLIITGDDVEEIFRTKENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLC 1080

Query: 1085 QQKYTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPD 1144
            QQKY +D+L+KF MLECK +STPME NAK+C HEGK+L D T YRQLVGSL+YLTLT PD
Sbjct: 1081 QQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLTLTXPD 1140

Query: 1145 ISYAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDH 1204
            ISYAVGVMSRYMQ+PKKPHL+A RRILR++KGTIDYGLLYK+ +DCKLVGYCDADYAGDH
Sbjct: 1141 ISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADYAGDH 1200

Query: 1205 DTRRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQK 1264
            DTR STTGYVF  GSG ISWCSKRQPTVSLSTTEAEYRAAA A QES WL  LM DLHQ 
Sbjct: 1201 DTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMATQESMWLIRLMNDLHQL 1260

Query: 1265 IDYPISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADL 1285
            +DY + L CDNQSA+RLAENPVFHARTKHVEVHYHFIREKVLKEE+E+ QIK++DQVADL
Sbjct: 1261 VDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFIREKVLKEEVELNQIKSEDQVADL 1300

BLAST of CmoCh20G007300 vs. TrEMBL
Match: I1J0P4_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1)

HSP 1 Score: 1399.0 bits (3620), Expect = 0.0e+00
Identity = 672/979 (68.64%), Postives = 813/979 (83.04%), Query Frame = 1

Query: 303  IMPGNKSDTVSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVKIIGKPTIE 362
            ++P   +  + L  VYHVPG+KKNLLSV QLT  G YVLFGP++V +++ +K+IG P +E
Sbjct: 446  VVPRYGTQQLQLERVYHVPGLKKNLLSVPQLTAEGKYVLFGPQEVAIFRRLKVIGTPIME 505

Query: 363  GRRVESVYVLSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLPQLEVKT 422
            G++ +S++VLSAESAYVDKTRKNET DLWHARLGH+SYHKLK +MEK ++KGLP L+++T
Sbjct: 506  GKKRDSLFVLSAESAYVDKTRKNETADLWHARLGHVSYHKLKEMMEKHVVKGLPDLDIRT 565

Query: 423  DVVCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVTFIDDYSRY 482
            D+VCAGCQYGKAHQLPYKES  ++K PLEL+HSD+FGPVKQ S+ GMRYMVTFIDD+SRY
Sbjct: 566  DMVCAGCQYGKAHQLPYKESQHQSKVPLELIHSDVFGPVKQISLGGMRYMVTFIDDFSRY 625

Query: 483  VWIFFMKEKSDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLHECGIRRQF 542
            VW++FMKEKS+TF KF+EFK M+EGE+  KIRCLR+DNG EY S+EF  YL +  I+RQ 
Sbjct: 626  VWVYFMKEKSETFIKFKEFKDMIEGELEYKIRCLRTDNGREYLSNEFTIYLKKKKIKRQL 685

Query: 543  TCANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLPQPKLGFVS 602
            TC NTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAE MRTAAHVINKLPQ +LGF S
Sbjct: 686  TCPNTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAECMRTAAHVINKLPQVRLGFKS 745

Query: 603  PFEILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKGWRCCDPTS 662
            P E LW MKP IS+ +VFGCVCY+FVPDHLR+KF+KKA +C+FVGYD+ RKGWRCCDPT+
Sbjct: 746  PHEKLWRMKPAISHLKVFGCVCYIFVPDHLRTKFEKKAKRCIFVGYDDARKGWRCCDPTT 805

Query: 663  GKYYTSRDVVFDEASTWWSSEKKVLSDS-NIEEILQ----QKLGEQTTQIQSNVDASENP 722
            GK +TSR++VFDEAS+WWS +K+ + +S ++EE+++    QKL   +   +S+   +++P
Sbjct: 806  GKCHTSRNIVFDEASSWWSPKKEEIPESPDVEEVIEEERDQKLETPSEGERSSPSKTKSP 865

Query: 723  SDIDIDKQEVTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIVEDRV-YEPETYEEAS 782
                I + E  Q+ E D      Q+LRRS R R+PNP+YANAA+ ++ +  EP +YEEA+
Sbjct: 866  WKTGIHQPEEPQTEEHD------QELRRSTRPRKPNPRYANAALADESLPIEPSSYEEAA 925

Query: 783  QNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVAR 842
            +   WQKAMEEEI AL+ NQTW+LVP+  D+KP+SCKWVYK+K R DGSIERYKARLVAR
Sbjct: 926  RGPEWQKAMEEEIKALKENQTWDLVPKPKDVKPISCKWVYKVKTRTDGSIERYKARLVAR 985

Query: 843  GFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQP 902
            GFSQ+YGLDY+ETFSPVAKITTVRVLLALAASK W+LWQMDVKNAFLHGELD+EIYM QP
Sbjct: 986  GFSQEYGLDYEETFSPVAKITTVRVLLALAASKSWELWQMDVKNAFLHGELDKEIYMEQP 1045

Query: 903  KGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNL 962
            KGFES   P +VCKL+KALYGLKQAPRAWYGKI EFL  +G+ VA +DSSLF+  +EG L
Sbjct: 1046 KGFESKKYPEHVCKLKKALYGLKQAPRAWYGKIGEFLVHNGFKVAPSDSSLFVMAKEGRL 1105

Query: 963  TIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQK 1022
             IVLVYVDDLIITGD   EI +TRENLS+RFQMKELGEL+HFLGLEV+ T  G+FL QQK
Sbjct: 1106 AIVLVYVDDLIITGDYSEEIERTRENLSVRFQMKELGELRHFLGLEVEHTKNGIFLGQQK 1165

Query: 1023 YTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISY 1082
            Y +D+L+++ ML+CK +STPM+ N ++   +GK L D T YRQLVGSLIYLTL+RPDISY
Sbjct: 1166 YAKDLLKRYGMLDCKPISTPMDPNTRLQEDKGKNLEDATMYRQLVGSLIYLTLSRPDISY 1225

Query: 1083 AVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTR 1142
            AVGV SRYM +PKKPHLDA RRILRY+KGT++YG+LYK++K+C+++GYCDADYAGD DTR
Sbjct: 1226 AVGVASRYMSTPKKPHLDAIRRILRYVKGTLNYGILYKKTKECQVIGYCDADYAGDCDTR 1285

Query: 1143 RSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDY 1202
            RSTTGY+F  GSG I+WCSKRQPTV+LS+TEAEYR+AA AAQESTWLK LMEDLHQ    
Sbjct: 1286 RSTTGYLFSLGSGAITWCSKRQPTVALSSTEAEYRSAAAAAQESTWLKQLMEDLHQTPKD 1345

Query: 1203 PISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTK 1262
             + + CDN S IRLAENPVFHARTKH+EVHYH+IREKVLK EIEM   KT+DQ AD+ TK
Sbjct: 1346 QVWIFCDNLSTIRLAENPVFHARTKHIEVHYHYIREKVLKGEIEMVPTKTEDQTADILTK 1405

Query: 1263 GLNTSKHESFRCQLNMMQR 1276
             LN SK E FR  L M+ +
Sbjct: 1406 SLNKSKFEKFREALGMVTK 1418

BLAST of CmoCh20G007300 vs. TrEMBL
Match: I1IA27_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1)

HSP 1 Score: 1398.3 bits (3618), Expect = 0.0e+00
Identity = 671/970 (69.18%), Postives = 810/970 (83.51%), Query Frame = 1

Query: 312  VSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVKIIGKPTIEGRRVESVYV 371
            + L  VYHVPG+KKNLLSV QLT  G YVLFGP++V +++ +K+IG P +EG++ +S++V
Sbjct: 455  LQLERVYHVPGLKKNLLSVPQLTAEGKYVLFGPQEVAIFRRLKVIGTPIMEGKKRDSLFV 514

Query: 372  LSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLPQLEVKTDVVCAGCQY 431
            LSAESAYVDKTRKNET DLWHARLGH+SYHKLK +MEK ++KGLP L+++TD+VCAGCQY
Sbjct: 515  LSAESAYVDKTRKNETADLWHARLGHVSYHKLKEMMEKHVVKGLPDLDIRTDMVCAGCQY 574

Query: 432  GKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVTFIDDYSRYVWIFFMKEK 491
            GKAHQLPYKES  ++K PLEL+HSD+FGPVKQ S+ GMRYMVTFI+D+SRYVW++FMKEK
Sbjct: 575  GKAHQLPYKESQHQSKVPLELIHSDVFGPVKQISLGGMRYMVTFINDFSRYVWVYFMKEK 634

Query: 492  SDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLHECGIRRQFTCANTPQQN 551
            S+TF KF+EFK M+EGE+  KIRCLR+DNG EY S+EF  YL +  I+RQ TC NTPQQN
Sbjct: 635  SETFMKFKEFKDMIEGELEYKIRCLRTDNGREYLSNEFTIYLKKNKIKRQLTCPNTPQQN 694

Query: 552  GVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLPQPKLGFVSPFEILWDMK 611
            GVAERKNRHLAETCRSMLHAKNVPGRFWAE MRTAAHVINKLPQ +LGF SP E LW MK
Sbjct: 695  GVAERKNRHLAETCRSMLHAKNVPGRFWAECMRTAAHVINKLPQVRLGFKSPHEKLWRMK 754

Query: 612  PTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKGWRCCDPTSGKYYTSRDV 671
            P IS+ +VFGCVCY+FVPDHLR+KF+KKA +C+FVGYD+ RKGWRCCDPT+GK + SR++
Sbjct: 755  PAISHLKVFGCVCYIFVPDHLRTKFEKKAKRCIFVGYDDARKGWRCCDPTTGKCHISRNI 814

Query: 672  VFDEASTWWSSEKKVLSDS-NIEEILQ----QKLGEQTTQIQSNVDASENPSDIDIDKQE 731
            VFDEAS+WWS +K+ + +S ++EE+++    QKL   +   +S+   +++P    I + E
Sbjct: 815  VFDEASSWWSPKKEEIPESPDVEEVIEEERDQKLETPSEGERSSPSKTKSPWKTGIHQPE 874

Query: 732  VTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIVEDRV-YEPETYEEASQNSVWQKAM 791
              Q+ E D      Q+LRRS R R+PNP+YANAA+ ++ +  EP +YEEA++   WQKAM
Sbjct: 875  EPQTEEHD------QELRRSTRPRKPNPRYANAALADESLPIEPSSYEEAARGPEWQKAM 934

Query: 792  EEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLD 851
            EEEI AL+ NQTW+LVP+  D+KP+SCKWVYK+K R DGSIERYKARLVARGFSQ+YGLD
Sbjct: 935  EEEIKALKENQTWDLVPKPKDVKPISCKWVYKVKTRTDGSIERYKARLVARGFSQEYGLD 994

Query: 852  YDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAANP 911
            Y+ETFSPVAKITTVRVLLALAASK W+LWQMDVKNAFLHGELD+EIYM QPKGFES   P
Sbjct: 995  YEETFSPVAKITTVRVLLALAASKSWELWQMDVKNAFLHGELDKEIYMEQPKGFESKKYP 1054

Query: 912  NYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVDD 971
             +VCKL+KALYGLKQAPRAWYGKI EFL  +G+ VA +DSSLF+  +EG L IVLVYVDD
Sbjct: 1055 EHVCKLKKALYGLKQAPRAWYGKIGEFLVHNGFKVAPSDSSLFVMAKEGRLAIVLVYVDD 1114

Query: 972  LIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQKF 1031
            LIITGD   EI +TRENLS+RFQMKELGEL+HFLGLEV+ T  G+FL QQKY +D+L+++
Sbjct: 1115 LIITGDYSEEIERTRENLSVRFQMKELGELRHFLGLEVEHTKNGIFLGQQKYAKDLLKRY 1174

Query: 1032 NMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRYM 1091
             ML+CK +STPM+ NA++  H+GK L D T YRQLVGSLIYLTL+RPDISYAVGV SRYM
Sbjct: 1175 GMLDCKPISTPMDPNARLQEHKGKNLEDATMYRQLVGSLIYLTLSRPDISYAVGVASRYM 1234

Query: 1092 QSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVFK 1151
             +PKKPHLDA RRILRY+KGT++YG+LYK++K+C+++GYCDADYAGD DTRRSTTGY+F 
Sbjct: 1235 STPKKPHLDAIRRILRYVKGTLNYGILYKKTKECQVIGYCDADYAGDCDTRRSTTGYLFS 1294

Query: 1152 FGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQ 1211
             GSG I+WCSKRQPTV+LS+TEAEYR+AA AAQESTWLK LMEDLHQ     + + CDN 
Sbjct: 1295 LGSGAITWCSKRQPTVALSSTEAEYRSAAAAAQESTWLKQLMEDLHQTPKDQVWIFCDNL 1354

Query: 1212 SAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHES 1271
            S IRLAENPVFHARTKH+EVHYH+IREKVLK EIEM   KT+DQ AD+ TK LN SK E 
Sbjct: 1355 STIRLAENPVFHARTKHIEVHYHYIREKVLKGEIEMVPTKTEDQTADILTKSLNKSKFEK 1414

Query: 1272 FRCQLNMMQR 1276
            FR  L M+ +
Sbjct: 1415 FREALGMVTK 1418

BLAST of CmoCh20G007300 vs. TrEMBL
Match: I1HD26_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1)

HSP 1 Score: 1395.2 bits (3610), Expect = 0.0e+00
Identity = 671/978 (68.61%), Postives = 812/978 (83.03%), Query Frame = 1

Query: 304  MPGNKSDTVSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVKIIGKPTIEG 363
            +P   +  + L  VYHVPG+KKNLLSV QLT  G YVLFGP++V +++ +K+IG P +EG
Sbjct: 463  VPRYGTQQLQLERVYHVPGLKKNLLSVPQLTAEGKYVLFGPQEVAIFRRLKVIGTPIMEG 522

Query: 364  RRVESVYVLSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLPQLEVKTD 423
            ++ +S++VLSAESAYVDKTRKNET DLWHARLGH+SYHKLK +MEK ++KGLP L+++TD
Sbjct: 523  KKRDSLFVLSAESAYVDKTRKNETADLWHARLGHVSYHKLKEMMEKHVVKGLPDLDIRTD 582

Query: 424  VVCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVTFIDDYSRYV 483
            +VCAGCQYGKAHQLPYKES  ++K PLEL+HSD+FGPVKQ S+ GMRYMVTFIDD+SRYV
Sbjct: 583  MVCAGCQYGKAHQLPYKESQHQSKVPLELIHSDVFGPVKQISLGGMRYMVTFIDDFSRYV 642

Query: 484  WIFFMKEKSDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLHECGIRRQFT 543
            W++FMKEKS+TF KF+EFK M+EGE+  KIRCLR+DNG EY S+EF  YL +  I+RQ T
Sbjct: 643  WVYFMKEKSETFMKFKEFKDMIEGELEYKIRCLRTDNGREYLSNEFTIYLKKNKIKRQLT 702

Query: 544  CANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLPQPKLGFVSP 603
            C NTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAE MRTAAHVINKLPQ +LGF SP
Sbjct: 703  CPNTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAECMRTAAHVINKLPQVRLGFKSP 762

Query: 604  FEILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKGWRCCDPTSG 663
             E LW MKP IS+ +VFGCVCY+FVPDHLR+KF+KKA +C+FVGYD+ RKGWRCCDPT+G
Sbjct: 763  HEKLWRMKPAISHLKVFGCVCYIFVPDHLRTKFEKKAKRCIFVGYDDARKGWRCCDPTTG 822

Query: 664  KYYTSRDVVFDEASTWWSSEKKVLSDS-NIEEILQ----QKLGEQTTQIQSNVDASENPS 723
            K +TSR++VFDEAS+WWS +K+ + +S ++EE+++    QKL   +   +S+   +++P 
Sbjct: 823  KCHTSRNIVFDEASSWWSPKKEEIPESPDVEEVIEEERDQKLEIPSEGERSSPSKTKSPW 882

Query: 724  DIDIDKQEVTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIVEDRV-YEPETYEEASQ 783
               I + E  Q+ E D      Q+LRRS R R+PNP+YANAA+ ++ +  EP +YEEA++
Sbjct: 883  KTGIHQPEEPQTEEHD------QELRRSTRPRKPNPRYANAALADESLPIEPSSYEEAAR 942

Query: 784  NSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARG 843
               WQKAMEEEI AL+ NQTW+LVP+  ++KP+SCKWVYK+K R DGSIERYKARLVARG
Sbjct: 943  GPEWQKAMEEEIKALKENQTWDLVPKPKNVKPISCKWVYKVKTRTDGSIERYKARLVARG 1002

Query: 844  FSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPK 903
            FSQ+YGLDY+ETFSPVAKITTVRVLLALAASK W+LWQMDVKNAFLHGELD+EIYM QPK
Sbjct: 1003 FSQEYGLDYEETFSPVAKITTVRVLLALAASKSWELWQMDVKNAFLHGELDKEIYMEQPK 1062

Query: 904  GFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLT 963
            GFES   P +VCKL+KALYGLKQAPRAWYGKI EFL  +G+ VA +DSSLF+  +EG L 
Sbjct: 1063 GFESKKYPEHVCKLKKALYGLKQAPRAWYGKIGEFLVHNGFKVAPSDSSLFVMAKEGRLA 1122

Query: 964  IVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKY 1023
            IVLVYVDDLIITGD   EI +TRENLS+RFQMKELGEL+HFLGLEV+ T  G+FL QQKY
Sbjct: 1123 IVLVYVDDLIITGDYSEEIERTRENLSVRFQMKELGELRHFLGLEVEHTKNGIFLGQQKY 1182

Query: 1024 TRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYA 1083
             +D+L+++ ML+CK +STPM+ NA++   +GK L D T YRQLVGSLIYLTL+RPDISYA
Sbjct: 1183 AKDLLKRYGMLDCKPISTPMDPNARLQEDKGKNLEDATMYRQLVGSLIYLTLSRPDISYA 1242

Query: 1084 VGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRR 1143
            VGV SRYM +PKKPHLDA RRILRY+KGT++YG+LYK++K+C+++GYCDADYAGD DTRR
Sbjct: 1243 VGVASRYMSTPKKPHLDAIRRILRYVKGTLNYGILYKKTKECQVIGYCDADYAGDCDTRR 1302

Query: 1144 STTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYP 1203
            STTGY+F  GSG I+WCSKRQPTV+LS+TEAEYR+AA AAQESTWLK LMEDLHQ     
Sbjct: 1303 STTGYLFSLGSGAITWCSKRQPTVALSSTEAEYRSAAAAAQESTWLKQLMEDLHQTPKDQ 1362

Query: 1204 ISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKG 1263
            + + CDN S IRLAENPVFHARTKH+EVHYH+IREKVLK EIEM   KT+D  AD+ TK 
Sbjct: 1363 VWIFCDNLSTIRLAENPVFHARTKHIEVHYHYIREKVLKGEIEMVPTKTEDHTADILTKS 1422

Query: 1264 LNTSKHESFRCQLNMMQR 1276
            LN SK E FR  L M+ +
Sbjct: 1423 LNKSKFEKFREALGMVTK 1434

BLAST of CmoCh20G007300 vs. TrEMBL
Match: I1H466_BRADI (Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1)

HSP 1 Score: 1394.8 bits (3609), Expect = 0.0e+00
Identity = 669/970 (68.97%), Postives = 809/970 (83.40%), Query Frame = 1

Query: 312  VSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVKIIGKPTIEGRRVESVYV 371
            + L  VYHVPG+KKNLLSV QLT  G YVLFGP++V +++ +K+IG P +EG++ +S++V
Sbjct: 455  LQLERVYHVPGLKKNLLSVPQLTAEGKYVLFGPQEVAIFRRLKVIGTPIMEGKKRDSLFV 514

Query: 372  LSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLPQLEVKTDVVCAGCQY 431
            LSAESAYVDKTRKNET DLWHARLGH+SYHKLK +MEK ++KGLP L+++TD+VCAGCQY
Sbjct: 515  LSAESAYVDKTRKNETADLWHARLGHVSYHKLKEMMEKHVVKGLPDLDIRTDMVCAGCQY 574

Query: 432  GKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVTFIDDYSRYVWIFFMKEK 491
            GKAHQLPYKES  ++K PLEL+HSD+FGPVKQ S+ GMRYMVTFIDD+SRYVW++FMKEK
Sbjct: 575  GKAHQLPYKESQHQSKVPLELIHSDVFGPVKQISLGGMRYMVTFIDDFSRYVWVYFMKEK 634

Query: 492  SDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLHECGIRRQFTCANTPQQN 551
            S+TF KF+EFK M+EGE+  KIRCLR+DNG EY S+EF  YL +  I+RQ TC NTPQQN
Sbjct: 635  SETFMKFKEFKDMIEGELEYKIRCLRTDNGREYLSNEFTIYLKKNKIKRQLTCPNTPQQN 694

Query: 552  GVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLPQPKLGFVSPFEILWDMK 611
            GVAERKNRHLAETCRSMLHAKNVPGRFWAE MRTAAHVINKLPQ +LGF SP E LW MK
Sbjct: 695  GVAERKNRHLAETCRSMLHAKNVPGRFWAECMRTAAHVINKLPQVRLGFKSPHEKLWRMK 754

Query: 612  PTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKGWRCCDPTSGKYYTSRDV 671
            P IS+ +VFGCVCY+FVPDHLR+KF+KKA +C+FVGYD+ +KGWRCCDPT+GK +TSR++
Sbjct: 755  PAISHLKVFGCVCYIFVPDHLRTKFEKKAKRCIFVGYDDAQKGWRCCDPTTGKCHTSRNI 814

Query: 672  VFDEASTWWSSEKKVLSDS-NIEEILQ----QKLGEQTTQIQSNVDASENPSDIDIDKQE 731
            VFDEAS+WWS +K+ + +S ++EE+++    QKL   +   +S+   +++P    I + E
Sbjct: 815  VFDEASSWWSPKKEEIPESPDVEEVIEEERDQKLETPSEGERSSPSKTKSPWKTGIHQPE 874

Query: 732  VTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIVEDRV-YEPETYEEASQNSVWQKAM 791
              Q+ E D      Q+LRRS R R+PNP+YANAA+ ++ +  EP +YEEA++   WQKAM
Sbjct: 875  EPQTEEHD------QELRRSTRPRKPNPRYANAALADESLPIEPSSYEEAARGPEWQKAM 934

Query: 792  EEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLD 851
            EEEI AL+ NQTW+LVP+  D+KP+SCKWVYK+K R DGSIERYKARLVARGFSQ+YGLD
Sbjct: 935  EEEIKALKENQTWDLVPKPKDVKPISCKWVYKVKTRTDGSIERYKARLVARGFSQEYGLD 994

Query: 852  YDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAANP 911
            Y+ETFSPVAKITTVRVLLALAASK W+LWQMDVKNAFLHGELD+EIYM QPKGFES   P
Sbjct: 995  YEETFSPVAKITTVRVLLALAASKSWELWQMDVKNAFLHGELDKEIYMEQPKGFESKKYP 1054

Query: 912  NYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVDD 971
             +VCKL+KALYGLKQAPRAWYGKI EFL  +G+ VA +DSSLF+  +EG L IVLVYVDD
Sbjct: 1055 EHVCKLKKALYGLKQAPRAWYGKIGEFLVHNGFKVAPSDSSLFVMAKEGRLAIVLVYVDD 1114

Query: 972  LIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQKF 1031
            LIITGD   EI +TRENLS+RFQMKELGEL+HFLGLEV+ T  G+FL QQKY +D+L+++
Sbjct: 1115 LIITGDYSEEIERTRENLSVRFQMKELGELRHFLGLEVEHTKNGIFLGQQKYAKDLLKRY 1174

Query: 1032 NMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRYM 1091
             ML+CK +STPM+ NA++   +GK L D T YRQLVGSLIYLTL+RPDISYAVGV SRYM
Sbjct: 1175 GMLDCKPISTPMDPNARLQEDKGKNLEDATMYRQLVGSLIYLTLSRPDISYAVGVASRYM 1234

Query: 1092 QSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVFK 1151
             +PKKPHLDA RRILRY+KGT++YG+LYK++K+C+++GYCDADYAGD DTRRSTTGY+F 
Sbjct: 1235 STPKKPHLDAIRRILRYVKGTLNYGILYKKTKECQVIGYCDADYAGDCDTRRSTTGYLFS 1294

Query: 1152 FGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQ 1211
             GSG I+WCSKRQPTV+LS+TEAEYR+AA AAQESTWLK LMEDLHQ     + + CDN 
Sbjct: 1295 LGSGAITWCSKRQPTVALSSTEAEYRSAAAAAQESTWLKQLMEDLHQTPKDQVWIFCDNL 1354

Query: 1212 SAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHES 1271
            + IRLAENPVFHARTKH+EVHYH+IRE VLK EIEM   KT+DQ AD+ TK LN SK E 
Sbjct: 1355 TTIRLAENPVFHARTKHIEVHYHYIRENVLKGEIEMVPTKTEDQTADILTKSLNKSKFEK 1414

Query: 1272 FRCQLNMMQR 1276
            FR  L M+ +
Sbjct: 1415 FRKALGMVTK 1418

BLAST of CmoCh20G007300 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 419.5 bits (1077), Expect = 7.6e-117
Identity = 230/578 (39.79%), Postives = 341/578 (59.00%), Query Frame = 1

Query: 709  SNVDASENPSDIDIDKQEVTQSSESDKN-ETTHQQLRRSNRIR----------------- 768
            S+ DAS + S IDI      Q+   + +  T+H++ R+   ++                 
Sbjct: 3    SDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQ 62

Query: 769  -----RPNPKYANAAIVEDRVYEPETYEEASQNSVWQKAMEEEIIALEHNQTWELVPRLG 828
                 + +P Y +  +   +  EP TY EA +  VW  AM++EI A+E   TWE+     
Sbjct: 63   FLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPP 122

Query: 829  DIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLAL 888
            + KP+ CKWVYKIK   DG+IERYKARLVA+G++QQ G+D+ ETFSPV K+T+V+++LA+
Sbjct: 123  NKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAI 182

Query: 889  AASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN----PNYVCKLRKALYGLKQA 948
            +A  ++ L Q+D+ NAFL+G+LD EIYM  P G+ +       PN VC L+K++YGLKQA
Sbjct: 183  SAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242

Query: 949  PRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVDDLIITGDDEREIYQTRE 1008
             R W+ K +  L   G+  +H+D + F+K        VLVYVDD+II  +++  + + + 
Sbjct: 243  SRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKS 302

Query: 1009 NLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQKFNMLECKQVSTPMEINA 1068
             L   F++++LG LK+FLGLE+ R+  G+ +CQ+KY  D+L +  +L CK  S PM+ + 
Sbjct: 303  QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 362

Query: 1069 KICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRYMQSPKKPHLDAARRILR 1128
               AH G +  D   YR+L+G L+YL +TR DIS+AV  +S++ ++P+  H  A  +IL 
Sbjct: 363  TFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILH 422

Query: 1129 YIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVFKFGSGTISWCSKRQPTV 1188
            YIKGT+  GL Y    + +L  + DA +    DTRRST GY    G+  ISW SK+Q  V
Sbjct: 423  YIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 482

Query: 1189 SLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQSAIRLAENPVFHARTK 1248
            S S+ EAEYRA + A  E  WL     +L   +  P  L CDN +AI +A N VFH RTK
Sbjct: 483  SKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTK 542

Query: 1249 HVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLN 1260
            H+E   H +RE+ + +       +  D+  D FT+ L+
Sbjct: 543  HIESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYLS 579

BLAST of CmoCh20G007300 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 6.8e-49
Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 1

Query: 959  VLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYT 1018
            +L+YVDD+++TG     +      LS  F MK+LG + +FLG+++     GLFL Q KY 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1019 RDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAV 1078
              +L    ML+CK +STP+ +         K   D + +R +VG+L YLTLTRPDISYAV
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1079 GVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRS 1138
             ++ + M  P     D  +R+LRY+KGTI +GL   ++    +  +CD+D+AG   TRRS
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 1139 TTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTW 1183
            TTG+    G   ISW +KRQPTVS S+TE EYRA A  A E TW
Sbjct: 183  TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmoCh20G007300 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 94.7 bits (234), Expect = 4.3e-19
Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 1

Query: 749 IRRPNPKYANAAIVEDRVYEPETYEEASQNSVWQKAMEEEIIALEHNQTWELVPRLGDIK 808
           I + NPKY+   I      EP++   A ++  W +AM+EE+ AL  N+TW LVP   +  
Sbjct: 9   INKLNPKYS-LTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQN 68

Query: 809 PVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLALA 867
            + CKWV+K K   DG+++R KARLVA+GF Q+ G+ + ET+SPV +  T+R +L +A
Sbjct: 69  ILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

BLAST of CmoCh20G007300 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-13
Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 1

Query: 1065 IYLTLTRPDISYAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGY 1124
            +YLT+TRPD+++AV  +S++  + +   + A  ++L Y+KGT+  GL Y  + D +L  +
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 1125 CDADYAGDHDTRRSTTGY 1143
             D+D+A   DTRRS TG+
Sbjct: 61   ADSDWASCPDTRRSVTGF 78

BLAST of CmoCh20G007300 vs. TAIR10
Match: ATMG00300.1 (ATMG00300.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-10
Identity = 35/103 (33.98%), Postives = 57/103 (55.34%), Query Frame = 1

Query: 361 IEGRRVESVYVLSAE----SAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLP 420
           ++G R +S+Y+L        + + +T K+ET  LWH+RL H+S   ++L+++K  L    
Sbjct: 39  LKGNRHDSLYILQGSVETGESNLAETAKDETR-LWHSRLAHMSQRGMELLVKKGFLDSSK 98

Query: 421 QLEVKTDVVCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFG 460
              +K    C  C YGK H++ +       K PL+ VHSDL+G
Sbjct: 99  VSSLK---FCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

BLAST of CmoCh20G007300 vs. NCBI nr
Match: gi|147794801|emb|CAN71427.1| (hypothetical protein VITISV_027864 [Vitis vinifera])

HSP 1 Score: 1641.3 bits (4249), Expect = 0.0e+00
Identity = 851/1351 (62.99%), Postives = 1002/1351 (74.17%), Query Frame = 1

Query: 5    MSDFQIVGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTPPE-EDSNDALRKWRI 64
            M D Q++GGIKKLNN NYNTW+TCMMSY+QGQDLWE+V G E T P+ ED+N  LRKW+I
Sbjct: 1    MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPKVEDANGILRKWKI 60

Query: 65   KAGKAMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKKNDTRLQLLENELLSISQRD 124
            KAGKAMFALKTTI E++LEHI D KTP EAW+TF  LFSKKNDTRLQLLE+EL S++QRD
Sbjct: 61   KAGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELFSVAQRD 120

Query: 125  MTIAQYFHKVKSICREITELDPKSAIVESRMKRIIIHGLRPEYRSFIAAVQGWPTQPSLV 184
            +TIAQYFHKVK++CREI+ELD ++ I E+ MKRIIIHGLRPE+R F+AA+QGW  QPSLV
Sbjct: 121  LTIAQYFHKVKTLCREISELDLEAPIGETXMKRIIIHGLRPEFRGFVAAIQGWQNQPSLV 180

Query: 185  EFENLLASQEAMAKQMGGFTLK-------------------------GEEALYTSESQSN 244
            EFENLLA QEA+AKQMGG +LK                          E+    S+ + +
Sbjct: 181  EFENLLAGQEALAKQMGGVSLKGEEEALYAHKGGWNSXQHTVRRTKKNEDKAKCSQGERS 240

Query: 245  NR-------PSTRRGYNGD----KRRSH--------QGIAQPERAQKNDNKSFQRTRF-- 304
             R       P T + + G      ++ H        +G+ +           +    F  
Sbjct: 241  ARVEGDSKNPGTXKKFEGKCYNCXKKGHMAKDCWSKKGLVESNATTSKSEDEWDAQAFFA 300

Query: 305  ----GGICYNCGKKGHMSRDCWSRKKSIENNVAISKKKIED--EWDAEDVQIMPGNK--- 364
                        ++    +D W       N++   K+K++D  E+    + +   N    
Sbjct: 301  AIGESAFIATTSEQIDYEKD-WIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTANNSKLP 360

Query: 365  --------------SDTVSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVK 424
                          ++ VSL NVYHVPG+KKNLLSV+QLT+SG  VLFGP+DVKVY D++
Sbjct: 361  IAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHSVLFGPQDVKVYHDLE 420

Query: 425  IIGKPTIEGRRVESVYVLSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKG 484
            ++ +P I+GRR+ESVYV+SAE+AYVDKTRKNET DLWH RL HISY KL ++M+KSMLKG
Sbjct: 421  VMEEPVIKGRRLESVYVMSAETAYVDKTRKNETADLWHMRLSHISYSKLTMMMKKSMLKG 480

Query: 485  LPQLEVKTDVVCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVT 544
            LPQLEV+   +CA CQYGKAHQLPY+ES +KAK PLEL+HSD+FGPVKQAS+SGM     
Sbjct: 481  LPQLEVRKXTICAXCQYGKAHQLPYEESKWKAKGPLELIHSDVFGPVKQASLSGM----- 540

Query: 545  FIDDYSRYVWIFFMKEKSDTFSKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLH 604
                  +Y+  F      D FS+    +M                    +TS E  +Y  
Sbjct: 541  ------KYMVTFI-----DDFSRRVYLQMSF------------------FTSSENXEYAI 600

Query: 605  ECGIRRQFTCANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLP 664
                   FTCANTPQQNGV ERKNRHLAE CRSMLHAKNVPG FWAE M+TAA VIN+LP
Sbjct: 601  S------FTCANTPQQNGVXERKNRHLAEICRSMLHAKNVPGXFWAEXMKTAAFVINRLP 660

Query: 665  QPKLGFVSPFEILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKG 724
            Q +L F SPFE LW++KPT+SYFRVFGCVCYVFVP+HLRSK DKKAV+CV VGYD+QRK 
Sbjct: 661  QQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNHLRSKMDKKAVRCVLVGYDSQRKX 720

Query: 725  WRCCDPTSGKYYTSRDVVFDEASTWWSSEKKVLSDSNIEEILQQKLGEQTTQIQSNVDAS 784
            WRCCDPT+GK YTSR+VVFDE+S+WWSSEK++L DS+   + + +L  Q+ +IQ ++  +
Sbjct: 721  WRCCDPTTGKCYTSRNVVFDESSSWWSSEKEILXDSB---VFKDEL--QSARIQLSLGEA 780

Query: 785  ENPSDIDIDKQEVTQSSESDKNETTHQQLRRSNRIRRPNPKYANAAIVED-RVYEPETYE 844
            EN  D DI   + TQS      +T         R ++PNPKYAN AIVED    EP T+ 
Sbjct: 781  ENAXDGDIG-DDXTQSPW----QTGVHGQPSEERTKKPNPKYANVAIVEDANAKEPXTFA 840

Query: 845  EASQNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARL 904
            EA QNS W KAM EEI AL+ NQTWELVP+  D++P SCKWVYKIKRR DGSIER+KA L
Sbjct: 841  EAFQNSDWSKAMXEEIAALKRNQTWELVPKPRDVEPXSCKWVYKIKRRTDGSIERHKAXL 900

Query: 905  VARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYM 964
            VARGFSQQYGLDYDETFSPV K+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM
Sbjct: 901  VARGFSQQYGLDYDETFSPVXKLTTVRVLLALAANKDWDLWQMDVKNAFLHGELDREIYM 960

Query: 965  NQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKERE 1024
            NQP GF+S  +P YVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSV  ADSSLF+K   
Sbjct: 961  NQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTPADSSLFVKANG 1020

Query: 1025 GNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLC 1084
            G L IVLVYVDDLIITGDD  EI++T+ENLS+RF+MKELG+LKHFLGLEVDRT+EG+FLC
Sbjct: 1021 GKLAIVLVYVDDLIITGDDVEEIFRTKENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLC 1080

Query: 1085 QQKYTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPD 1144
            QQKY +D+L+KF MLECK +STPME NAK+C HEGK+L D T YRQLVGSL+YLTLT PD
Sbjct: 1081 QQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLTLTXPD 1140

Query: 1145 ISYAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDH 1204
            ISYAVGVMSRYMQ+PKKPHL+A RRILR++KGTIDYGLLYK+ +DCKLVGYCDADYAGDH
Sbjct: 1141 ISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADYAGDH 1200

Query: 1205 DTRRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQK 1264
            DTR STTGYVF  GSG ISWCSKRQPTVSLSTTEAEYRAAA A QES WL  LM DLHQ 
Sbjct: 1201 DTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMATQESMWLIRLMNDLHQL 1260

Query: 1265 IDYPISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADL 1285
            +DY + L CDNQSA+RLAENPVFHARTKHVEVHYHFIREKVLKEE+E+ QIK++DQVADL
Sbjct: 1261 VDYAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFIREKVLKEEVELNQIKSEDQVADL 1300

BLAST of CmoCh20G007300 vs. NCBI nr
Match: gi|147817226|emb|CAN75363.1| (hypothetical protein VITISV_026292 [Vitis vinifera])

HSP 1 Score: 911.0 bits (2353), Expect = 2.4e-261
Identity = 471/753 (62.55%), Postives = 546/753 (72.51%), Query Frame = 1

Query: 462  KQASISGMRYMVTFIDDYSRYVWIFFMKEKSDTFSKFQEFKMMVEGEVGAKIRCLRSDNG 521
            KQAS+SGM+YMVTFI+D+S YVW++FMKEKS+TFSK++EFK M E +V  +IRCLR+DNG
Sbjct: 461  KQASLSGMKYMVTFINDFSNYVWVYFMKEKSETFSKYKEFKEMTEVKVDKRIRCLRTDNG 520

Query: 522  GEYTSDEFDQYLHECGIRRQFTCANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAE 581
            GEYTSDEF  +L EC +R QFTCANTPQQN VAERKNRHLAE CRSMLHAKNVP RFWAE
Sbjct: 521  GEYTSDEFFYFLRECRVRHQFTCANTPQQNSVAERKNRHLAEICRSMLHAKNVPRRFWAE 580

Query: 582  AMRTAAHVINKLPQPKLGFVSPFEILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAV 641
            AM+T A VIN+LPQ KL F SPFE LW++KPTISYFRVFGCVCYVFVP+HLRSK DKK +
Sbjct: 581  AMKTVAFVINRLPQQKLNFSSPFEKLWNIKPTISYFRVFGCVCYVFVPNHLRSKMDKKEI 640

Query: 642  KCVFVGYDNQRKGWRC-CDPTSGKYYTSRDVVFDEASTWWSSEKKVLSDSNIEEILQQKL 701
                  + ++ +  R        +   + D+  DE  + W +    +     EE    + 
Sbjct: 641  LPDSDVFKDELQSARIQLSLGEXENAANGDIXDDETQSPWQTG---VHGQXSEEGEPSET 700

Query: 702  GEQTTQIQSNVDASENPSDIDIDKQEVTQSSESDKNETTHQQLRRSNRIRRPNPKYANAA 761
                   +S      NP   ++    + + + + + ET  +  +        NP ++ A 
Sbjct: 701  EAPIPLRRSARTKKPNPKYANV---AIVEDANAKEPETFAEAFQ--------NPDWSKAM 760

Query: 762  IVEDRVYEPETYEEASQNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKR 821
                     E      +N  W+                   P+  D++P+SCKWVYKIKR
Sbjct: 761  --------KEEIAALKRNQTWELV-----------------PKXRDVEPISCKWVYKIKR 820

Query: 822  RPDGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKN 881
            R DG IER+KARLVARGFSQQYGLDYDETFSPVAK+TTVRVLLALAA+KDW L QMDVKN
Sbjct: 821  RTDGLIERHKARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWDLRQMDVKN 880

Query: 882  AFLHGELDREIYMNQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSV 941
            AFLHGELDREIYMNQP GF+S  +P YVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYS+
Sbjct: 881  AFLHGELDREIYMNQPMGFQSQGHPKYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSI 940

Query: 942  AHADSSLFIKEREGNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLG 1001
              ADSSLF+K   G L IVL Y                  ENLS+RF+MKELG+LKHFLG
Sbjct: 941  TPADSSLFVKANGGKLAIVLAY------------------ENLSVRFEMKELGQLKHFLG 1000

Query: 1002 LEVDRTDEGLFLCQQKYTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQL 1061
            LEVDRT EG+FLCQQKY +D+L+KF MLECK +STPME NAK+C HEGK+L D T YRQL
Sbjct: 1001 LEVDRTHEGIFLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQL 1060

Query: 1062 VGSLIYLTLTRPDISYAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCK 1121
            VGSL+YLT TR DISYAVGVMSRYMQ+PKKPHL+A RRILR++KGTIDYGLLYK+ +D K
Sbjct: 1061 VGSLLYLTFTRTDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDYK 1120

Query: 1122 LVGYCDADYAGDHDTRRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQES 1181
            LVGYCDADY GDHDTRRSTTGYVF  GS  ISWCSKRQPTVSLST E EYRAA  AAQES
Sbjct: 1121 LVGYCDADYVGDHDTRRSTTGYVFMLGSRAISWCSKRQPTVSLSTMEXEYRAAPMAAQES 1156

Query: 1182 TWLKLLMEDLHQKIDYPISLLCDNQSAIRLAEN 1214
            TWL  LM DLHQ +DY   L CDNQSA+RLAEN
Sbjct: 1181 TWLIRLMNDLHQXVDYAXPLYCDNQSAVRLAEN 1156

BLAST of CmoCh20G007300 vs. NCBI nr
Match: gi|147810137|emb|CAN73532.1| (hypothetical protein VITISV_012827 [Vitis vinifera])

HSP 1 Score: 881.3 bits (2276), Expect = 2.0e-252
Identity = 495/936 (52.88%), Postives = 617/936 (65.92%), Query Frame = 1

Query: 5   MSDFQIVGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTPPE-EDSNDALRKWRI 64
           M D Q++GGIKKLNN NYNTW+TCMMSY+QGQDLWE+V G E T PE ED N  LRKW+I
Sbjct: 1   MGDLQVIGGIKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPEAEDVNGILRKWKI 60

Query: 65  KAGKAMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKKNDTRLQLLENELLSISQRD 124
           K GKAMFALKTTI E++LEHI D KTP EAW+TF  LFSKKNDTRLQLLE+ELLSI+QRD
Sbjct: 61  KXGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDTRLQLLESELLSIAQRD 120

Query: 125 MTIAQYFHKVKSICREITELDPKSAIVESRMKRIIIHGLRPEYRSFIAAVQGWPTQPSLV 184
           +TI  YFHKVK++CREI+ELD ++ I E+RMKRIIIHGLRP++R F+AA+QGW  QPSLV
Sbjct: 121 LTITHYFHKVKTLCREISELDLEAPIGETRMKRIIIHGLRPKFRGFVAAIQGWQNQPSLV 180

Query: 185 EFENLLASQEAMAKQMGGFTLKGEE-ALYTSESQSNNR---------------------- 244
           EFENLLA QEA+AKQMGG +LKGEE ALY  + + N++                      
Sbjct: 181 EFENLLAGQEALAKQMGGVSLKGEEEALYAHKGRWNSKQHTVGRTKKNEDKAKXSQGERS 240

Query: 245 ---------PSTRRG-----YNGDKRR-------SHQGIAQPERAQKNDNKSFQRTRF-- 304
                    P TR+      YN  K+        S +G+ +   A       +    F  
Sbjct: 241 ARVEGDSKNPXTRKKXEGKCYNCGKKGHMAKDCWSKKGLVESNAATSESEBEWDAQAFFV 300

Query: 305 ----GGICYNCGKKGHMSRDCWSRKKSIENNVAISKKKIED--EWDAEDVQIMPGNK--- 364
                       ++    +D W       N++   K+K+ D  E+    + +   N    
Sbjct: 301 AXGESXFIATTSEQIDYEKD-WIIDSGCSNHMTGDKEKLXDLSEYKGRHMVVTXNNSKJP 360

Query: 365 --------------SDTVSLHNVYHVPGIKKNLLSVSQLTTSGSYVLFGPEDVKVYQDVK 424
                         ++ VSL NVYHVPG+KKNLLSV+QLT+SG +VLFGP+DVKVY+D++
Sbjct: 361 IAHIGNTVVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQLTSSGHFVLFGPQDVKVYRDLE 420

Query: 425 IIGKPTIEGRRVESVYVLSAESAYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKG 484
           I+ +P I   R+ESVYV+SAE+A VDKTRKNETTDL H RL H+SY KL ++M+KSMLKG
Sbjct: 421 IMEEPVIXRWRLESVYVMSAETAXVDKTRKNETTDLXHMRLSHVSYSKLTVMMKKSMLKG 480

Query: 485 LPQLEVKTDVVCAGCQYGKAHQLPYKESSFKAKKPLELVHSDLFGPVKQASISGMRYMVT 544
           LPQLEV+ D +CAGC YGKAHQLPY+ES +K K PLEL+HSD+FGPVK AS+SGM+    
Sbjct: 481 LPQLEVRKDTICAGCXYGKAHQLPYEESKWKTKGPLELIHSDVFGPVKXASLSGMK---- 540

Query: 545 FIDDYSRYVWIFFMKEKSDTFSKFQEFKMMVE-GEVGAKIRCLRSDNGGEYTSDEFDQYL 604
                  Y+  F      D FS++     M E  E  +K +             EF + +
Sbjct: 541 -------YMXTFI-----DDFSRYVWVHFMKEKSETFSKFK-------------EFKE-M 600

Query: 605 HECGIRRQFTCANTPQQNGVAERKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKL 664
            E  + ++  C      NG              SMLH KNVPGRFW EAM+TAA VIN+L
Sbjct: 601 TEAEVDKRIRCLRX--DNGG------------ESMLHXKNVPGRFWVEAMKTAAFVINRL 660

Query: 665 PQPKLGFVSPFEILWDMKPTISYFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRK 724
           PQ +L F SPFE LW++KP +SYFRVFGCVCY FVP+H RSK DKK V+CV VGYD+Q K
Sbjct: 661 PQQRLNFSSPFEKLWNIKPIVSYFRVFGCVCYAFVPNHXRSKMDKKXVRCVLVGYDSQXK 720

Query: 725 GWRCCDPTSGKYYTSRDVVFDEASTWWSSEKKVLSDSNIEEILQQKLGEQTTQIQSNVDA 784
            WRCC+PT+GKYYTSR+VVFDE+S+WWSSEK++L DS   ++ + +L  Q+ +IQ ++  
Sbjct: 721 RWRCCNPTTGKYYTSRNVVFDESSSWWSSEKEILPDS---DVFKDEL--QSARIQLSLGE 780

Query: 785 SENPSDIDIDKQEVTQS--------SESDKNETTHQQ----LRRSNRIRRPNPKYANAAI 844
           +EN +D DI   E TQS          S++ E +  +    LRRS R ++PNPKYAN AI
Sbjct: 781 AENAADGDIGDDE-TQSPWQTGVHGQPSEEGEPSEIEAPIPLRRSARTKKPNPKYANVAI 840

Query: 845 VED-RVYEPETYEEASQNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKR 857
           VED    EPET+ EA QN  W KAM+EEI AL+ NQTWELVP+  D++P+SCKWVYKIKR
Sbjct: 841 VEDANTKEPETFAEAFQNPDWSKAMKEEIAALKRNQTWELVPKPRDVEPISCKWVYKIKR 885

BLAST of CmoCh20G007300 vs. NCBI nr
Match: gi|147798853|emb|CAN61340.1| (hypothetical protein VITISV_007301 [Vitis vinifera])

HSP 1 Score: 831.6 bits (2147), Expect = 1.8e-237
Identity = 427/629 (67.89%), Postives = 490/629 (77.90%), Query Frame = 1

Query: 674  DEASTWWSSEKKVLSDSNIEEILQQKLGEQTTQIQSNVDA------SENPSDIDIDKQEV 733
            +E    W      +S S +  ++++ + +   +++   D       +EN +D DI+  E 
Sbjct: 362  NETINLWHMRLSHISYSKLTVMMKKSMLKGLPELEMRKDTICAGCEAENVADGDIEDDET 421

Query: 734  TQ----------SSESDKNETTHQ-QLRRSNRIRRPNPKYANAAIVED-RVYEPETYEEA 793
                        S E + +ET     LRRS R ++PNPKYAN AIVED    EPET+ EA
Sbjct: 422  QSPWQTGVHGQPSEEGEPSETEAPIPLRRSARTKKPNPKYANVAIVEDANAKEPETFAEA 481

Query: 794  SQNSVWQKAMEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVA 853
             QN  W KA++EEI AL+ NQTWELVP+  D++P+SCKWVYKIKRR DGSIER+KARLVA
Sbjct: 482  FQNPDWTKAIKEEIAALKQNQTWELVPKPRDVEPISCKWVYKIKRRTDGSIERHKARLVA 541

Query: 854  RGFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQ 913
            RGFSQQYGLDYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYMNQ
Sbjct: 542  RGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWDLWQMDVKNAFLHGELDREIYMNQ 601

Query: 914  PKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGN 973
            P GF S  +P YVCKLRKALYGLKQAPRAWY                 DSSLF+K   G 
Sbjct: 602  PXGFXSQGHPEYVCKLRKALYGLKQAPRAWY-----------------DSSLFVKANGGK 661

Query: 974  LTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQ 1033
            L IVLVYVDDLIIT DD  EI++T ENLS+RF+MKELG+LKHFLGLEVD T EG+FLCQQ
Sbjct: 662  LVIVLVYVDDLIITRDDVEEIFRTEENLSVRFEMKELGQLKHFLGLEVDCTHEGIFLCQQ 721

Query: 1034 KYTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDIS 1093
            KY +D+L+KF MLECK +STPME NAK+C HEGK+L D T YRQLVGSL+YLTLTRPDIS
Sbjct: 722  KYAKDLLKKFGMLECKSISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLVYLTLTRPDIS 781

Query: 1094 YAVGVMSRYMQSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDT 1153
            YAVGVMSRYMQ+PKKPHL+A RRILR++KGTIDYGLLYK+ +DCKLVGYCDADYAGDHDT
Sbjct: 782  YAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDCKLVGYCDADYAGDHDT 841

Query: 1154 RRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKID 1213
            RRSTTGYVF  GSG ISWCSKRQPTVSL TTEAEYRAAA AAQESTWL  LM DLHQ +D
Sbjct: 842  RRSTTGYVFMLGSGAISWCSKRQPTVSLLTTEAEYRAAAMAAQESTWLIRLMNDLHQLVD 901

Query: 1214 YPISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFT 1273
            Y + L CDNQSA+RLAENPVFHARTKHVEVHYHFIREKVL+EE+E++QIK+ DQVADLFT
Sbjct: 902  YAVPLYCDNQSAVRLAENPVFHARTKHVEVHYHFIREKVLEEEVELKQIKSKDQVADLFT 961

Query: 1274 KGLNTSKHESFRCQLNMMQRMRTSAEGEC 1285
            KGL+ SK E F  QL M++ +    EGEC
Sbjct: 962  KGLSGSKFECFCHQLGMVKILEADVEGEC 973

BLAST of CmoCh20G007300 vs. NCBI nr
Match: gi|47824985|gb|AAT38758.1| (Putative gag-pol polyprotein, identical [Solanum demissum])

HSP 1 Score: 818.1 bits (2112), Expect = 2.1e-233
Identity = 493/1327 (37.15%), Postives = 749/1327 (56.44%), Query Frame = 1

Query: 21   NYNTWATCMMSYLQGQDLWEIVGGCETTPPEEDSNDALRKWRIKAGKAMFALKTTIGEEM 80
            NY  W+  M +  + Q+LW+IV   ET  PE ++N  +R+ R +  KA+F ++  + +E+
Sbjct: 21   NYQFWSLKMKTLFKSQELWDIV---ETGIPEGNANQ-MREHRKRDSKALFTIQQALDDEI 80

Query: 81   LEHIWDDKTPKEAWDTFVMLF---SKKNDTRLQLLENELLSISQRDMTIAQ-YFHKVKSI 140
               I   +T K+AW+     +    K    +LQ L  +  ++   +    Q Y  +  +I
Sbjct: 81   FPRISAVETSKQAWEILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAI 140

Query: 141  CREITELDPK--SAIVESRMKRIIIHGLRPEYRSFIAAVQGWPTQPSLVEFENLLAS--- 200
               +     K  + IV S+    ++  L  ++   + A++      S   F+ L++S   
Sbjct: 141  VNRMRSYGEKIDNQIVVSK----VLRSLTTKFEHVVTAIEE-SKDLSTYSFDELMSSLLA 200

Query: 201  ------------QEAMAKQMGGFTLKG--EEALYTSESQSNNRPSTR----RGYN--GDK 260
                        QE   +  G F+ KG  E +      + N R   R    RG N  G+ 
Sbjct: 201  HEDRLNRSREKVQEKAFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGGSGRGRNQVGEF 260

Query: 261  RRSHQGI----------------AQPERAQKNDNKSFQRTRFGGICYNCGKKGHMSRDCW 320
            R+    I                 + +  QK+ N +        +     +    +   W
Sbjct: 261  RQYKSNIQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAVW 320

Query: 321  SRKKSIENNVAISKKKIEDEWDAEDVQIMPGN-----------------KSDTVSLHNVY 380
                   N+++ SK    D  +++  ++  G+                 + +   L++V 
Sbjct: 321  FIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQ 380

Query: 381  HVPGIKKNLLSVSQLTTSGSYVLFGPE--DVKVYQDVKIIGKPTIEGRRVESVYVLSAES 440
            +VP +  NLLSV QL TSG  V+F     D+K  +  + I +  +   ++  + + +  +
Sbjct: 381  YVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGN 440

Query: 441  AYVDKTRKNETTDLWHARLGHISYHKLKLIMEKSMLKGLPQLEVKTDVVCAGCQYGKAHQ 500
            + +    KNET +LWH R GH++ + LKL+++K M+ GLP   +K   +C GC YGK  +
Sbjct: 441  SALVVKEKNET-NLWHLRYGHLNVNWLKLLVQKDMVIGLPN--IKELDLCEGCIYGKQTR 500

Query: 501  LPYKES-SFKAKKPLELVHSDLFGPVKQASISGMRYMVTFIDDYSRYVWIFFMKEKSDTF 560
              +    S++A   LELVH+DL GP+K  S+ G RY + F DDYSR+ W++F+K KS+TF
Sbjct: 501  KSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTDDYSRFSWVYFLKFKSETF 560

Query: 561  SKFQEFKMMVEGEVGAKIRCLRSDNGGEYTSDEFDQYLHECGIRRQFTCANTPQQNGVAE 620
              F++FK  VE + G KI+ LR+D GGE+ S++F+ +  E GIRR+ T   TP+QNGVAE
Sbjct: 561  ETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAPYTPEQNGVAE 620

Query: 621  RKNRHLAETCRSMLHAKNVPGRFWAEAMRTAAHVINKLPQPKLGFVSPFEILWDMKPTIS 680
            RKNR + E  RS L AK +P  FW EA+ T  + +N  P   +   +P E     KP +S
Sbjct: 621  RKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNISPTKDVWNTTPLEAWNGKKPRVS 680

Query: 681  YFRVFGCVCYVFVPDHLRSKFDKKAVKCVFVGYDNQRKGWRCCDPTSGKYYTSRDVVFDE 740
            + R+FGC+ Y  V  H  SK D+K+ KC+FVGY  Q K +R  +P SGK   SR+VVF+E
Sbjct: 681  HLRIFGCIAYALVNFH--SKLDEKSTKCIFVGYSLQSKAYRLYNPISGKVIISRNVVFNE 740

Query: 741  ASTWWSSEKKVLSDSNIEEILQQKLGEQTTQIQSNVDASENPSDIDIDKQEVTQSSES-- 800
              +W  +   ++S  NI+ +         T  +S VD   +P+   +     +  + S  
Sbjct: 741  DVSWNFNSGNMMS--NIQLL--------PTDEESAVDFGNSPNSSPVSSSVSSPIAPSTT 800

Query: 801  ---DKNETTHQQLRRSNRIRRPNPKYANAAIVEDR----VYEPETYEEASQNSVWQKAME 860
               D++      LRRS R ++PNPKY+N      +    V +P  YEEA + S W+ AM 
Sbjct: 801  VAPDESSVEPIPLRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMI 860

Query: 861  EEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLDY 920
            EEI A+E N TWELV        +  KWV++ K   DGSI+++KARLVA+G+SQQ G+D+
Sbjct: 861  EEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDF 920

Query: 921  DETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAANPN 980
            DETFSPVA+  TVRV+LALAA     ++Q DVK+AFL+G+L+ E+Y++QP+GF    N N
Sbjct: 921  DETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNEN 980

Query: 981  YVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKER-EGNLTIVLVYVDD 1040
             V KLRKALYGLKQAPRAWY KI  F   SG+  +  + +L++K++      +V +YVDD
Sbjct: 981  KVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDD 1040

Query: 1041 LIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQKF 1100
            +I  G  +  +   + N+   F+M +LG LK+FLGLEV +  +G+F+ Q+KY  D+L+KF
Sbjct: 1041 MIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDLLKKF 1100

Query: 1101 NMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRYM 1160
             M+ C+  +TPM IN K+   +G E  +   +R LVG L YLT TRPDI+++V V+SR++
Sbjct: 1101 QMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFL 1160

Query: 1161 QSPKKPHLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVFK 1220
            QSP K H  AA+R+LRY+ GT D+G+ Y ++ + +LVG+ D+DYAG  D R+ST+G  F 
Sbjct: 1161 QSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFS 1220

Query: 1221 FGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQ 1273
            FGSG ++W SK+Q TV+LST+EAEY AA+ AA+++ WL+ L+ED   +      +  D++
Sbjct: 1221 FGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSK 1280

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
POLX_TOBAC3.1e-19740.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME2.5e-10136.36Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
M810_ARATH1.2e-4744.20Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
YCH4_YEAST1.9e-4533.55Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
YJ41B_YEAST2.1e-3125.32Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A5AKW8_VITVI0.0e+0062.99Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027864 PE=4 SV=1[more]
I1J0P4_BRADI0.0e+0068.64Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1[more]
I1IA27_BRADI0.0e+0069.18Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1[more]
I1HD26_BRADI0.0e+0068.61Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1[more]
I1H466_BRADI0.0e+0068.97Uncharacterized protein OS=Brachypodium distachyon PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G23160.17.6e-11739.79 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.16.8e-4944.20ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
ATMG00820.14.3e-1942.37ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00240.12.1e-1339.74ATMG00240.1 Gag-Pol-related retrotransposon family protein[more]
ATMG00300.12.8e-1033.98ATMG00300.1 Gag-Pol-related retrotransposon family protein[more]
Match NameE-valueIdentityDescription
gi|147794801|emb|CAN71427.1|0.0e+0062.99hypothetical protein VITISV_027864 [Vitis vinifera][more]
gi|147817226|emb|CAN75363.1|2.4e-26162.55hypothetical protein VITISV_026292 [Vitis vinifera][more]
gi|147810137|emb|CAN73532.1|2.0e-25252.88hypothetical protein VITISV_012827 [Vitis vinifera][more]
gi|147798853|emb|CAN61340.1|1.8e-23767.89hypothetical protein VITISV_007301 [Vitis vinifera][more]
gi|47824985|gb|AAT38758.1|2.1e-23337.15Putative gag-pol polyprotein, identical [Solanum demissum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR013103RVT_2
IPR025314DUF4219
IPR025724GAG-pre-integrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G007300.1CmoCh20G007300.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 447..563
score: 2.4
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 445..611
score: 23
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 252..278
score: 1.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 260..274
score: 1.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 260..276
score: 1.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 261..274
score: 11
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 253..283
score: 1.5
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 443..604
score: 5.6
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 448..620
score: 1.52
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 795..1038
score: 8.1E
IPR025314Domain of unknown function DUF4219PFAMPF13961DUF4219coord: 17..42
score: 2.7
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 382..434
score: 1.6
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 16..1197
score:
NoneNo IPR availablePANTHERPTHR11439:SF164SUBFAMILY NOT NAMEDcoord: 16..1197
score:
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 61..189
score: 4.8
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 1047..1228
score: 5.48E-38coord: 794..1017
score: 5.48

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G007300CSPI06G10080Wild cucumber (PI 183967)cmocpiB564
CmoCh20G007300CSPI07G01430Wild cucumber (PI 183967)cmocpiB567
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G007300Cucumber (Gy14) v2cgybcmoB787
CmoCh20G007300Cucumber (Gy14) v2cgybcmoB939
CmoCh20G007300Melon (DHL92) v3.6.1cmomedB578
CmoCh20G007300Melon (DHL92) v3.6.1cmomedB590
CmoCh20G007300Silver-seed gourdcarcmoB0473
CmoCh20G007300Silver-seed gourdcarcmoB0549
CmoCh20G007300Cucumber (Chinese Long) v3cmocucB0669
CmoCh20G007300Cucumber (Chinese Long) v3cmocucB0671
CmoCh20G007300Watermelon (97103) v2cmowmbB549
CmoCh20G007300Watermelon (97103) v2cmowmbB553
CmoCh20G007300Wax gourdcmowgoB0673
CmoCh20G007300Wax gourdcmowgoB0688
CmoCh20G007300Cucurbita moschata (Rifu)cmocmoB116
CmoCh20G007300Cucurbita moschata (Rifu)cmocmoB412
CmoCh20G007300Cucurbita moschata (Rifu)cmocmoB417
CmoCh20G007300Cucurbita maxima (Rimu)cmacmoB149
CmoCh20G007300Cucurbita maxima (Rimu)cmacmoB551
CmoCh20G007300Cucurbita maxima (Rimu)cmacmoB614
CmoCh20G007300Cucumber (Chinese Long) v2cmocuB561
CmoCh20G007300Melon (DHL92) v3.5.1cmomeB503
CmoCh20G007300Melon (DHL92) v3.5.1cmomeB512
CmoCh20G007300Watermelon (Charleston Gray)cmowcgB483
CmoCh20G007300Watermelon (Charleston Gray)cmowcgB486
CmoCh20G007300Watermelon (97103) v1cmowmB511
CmoCh20G007300Watermelon (97103) v1cmowmB514
CmoCh20G007300Cucurbita pepo (Zucchini)cmocpeB511
CmoCh20G007300Cucurbita pepo (Zucchini)cmocpeB513
CmoCh20G007300Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G007300Cucurbita pepo (Zucchini)cmocpeB525
CmoCh20G007300Cucurbita pepo (Zucchini)cmocpeB528
CmoCh20G007300Bottle gourd (USVL1VR-Ls)cmolsiB487
CmoCh20G007300Bottle gourd (USVL1VR-Ls)cmolsiB501
CmoCh20G007300Bottle gourd (USVL1VR-Ls)cmolsiB502