CmoCh20G006830 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATGTGTGGTTCGACACTTGTTTTTCTATAATCAAGTTCAAGTCGGCCATGAATTGGTGACGGAAAAAGCTTCGGATTCTTATGTTTCTTCATCCGCTCCCGCCACCGTTCTAAAACCCACAAAACTTGTCGCCAATTCCTAATCAAAATCCAAATCCAAATTCAAACATGATACCCAATATCAATCTTATCTCCTGCAACTCTTTCTCACCGTCTCCTCCTTCAAGATTTTCAAAGCTTGGAATTCTCCATAAAACCCAAACTCGAAACCCCCAAATCATCCCCTTCAAGTATTCGACATCGGTCTGCCCCCGCATCAACACTCGTCGAGATTCAAGCTACAGAAAAGTGGGTCTGCTCCAAAAATGGCGGAGTGCATCGGGAACTCAGAATGCGGGTGACCCAGTTGGGGAAAAAGCGACGCCGGTGGAAAGTGAGCGCGGCGGTAGCAGCGGCGGCGGGAATGGTGGGGAGGGAAGAGACTGGACGACTTCGATTTTACTGTTTGTATTGTGGGCTGGTCTTATGTTTTATGTGTTCATTCTCGCTCCAAATCAGACTCCGGTAATTACTTGATTGCCTTCTTCTTGTCTGTATGTTTGCTGTAATGCATATGCATCAAATGCTTATATGTTTGCCTGAATATTTGCAGTCAACGGACTTGTATTTCTTGAAGAAGCTTCTGAACTTGAAAAATGACGATGGTTTCAAAATGAATGAAGTGCTTGTCTCTCTTTGGTATATTATGGGGTTGTGGCCCCTTATCTACAGCATGCTGCTGCTTCCTTCTGGTAGAAGGTACCTTCATCTTCTTCCCCCAAATTTGGAATTCATTCATTCTGAGAATGTTTGAGCTACTGAGTTGATTGAACGCTTAAGCCTTTTATTTCCATGTCCAGCTTTTGGAGTTGATAATGAGTATCATAGATTGTAGTTGGGTAGCCTACATGTTAAGTGATTCAAGCTTTTTTCTCCAATGGAGTCTCCAATGGAGTGTTTGAGATTATTAGCAAATCTTACATGTCATCTATCTCAGGAGAGTAGAACGAAACATTCCTTACAAAGGTGTGGAAACTTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCCCTTGAAGGGAAAATCGAAAGAGGACAATATCTGCTAGCGGTTGGTTTGTGTTGTTACAAATGGTATTAGAGCTCGACACCGGACGGTGTGCCAGCGAGGATGCTGGGTGTCACGGTCCTATATTCTTGACCGTGCGGCGTCGTGATCTATACACGCTCACGACTAGCCTTAAGGGGAATTAAGCCCCATATATATTTTTCGCCCCGGCTTTGTGGCTTCGTCGAACCTTAGGCGAGGTTTGTCTTCGCCAATCGAACATCGCTTGTGCGGAATCCAAGCTTGTCCAACCACACACACCGCCTGTGCGTGTATGTTCAATCGTCTGCGACACATCCGACTTGCCTCTACGCTAGGCCAACTCATTCGGGCCAAGGTCTCTCAATACAACGTCGCATCTCGTCTTGCCATCTCGATCCCCATCGACGGGGTCCATATGTCTTGACGCCATCCCAAGTCTCGGGATGTCGTCGGCCATCGTAACTCGTTCGGTCATGCCATCGAGAATGGGCCCGCGTGTCGTTCATCTCATCGGGACTTTCCGAACATCCATCCATCCGGGTTCTATCGAGGCATAGGCCCTCCCGTGCCCATGCCGAGTCATTTATGGATATCGTACCGGATAGCGGGTGTATGTAGCAACCTCCAACACGCGGGCTAGGGCGCAATACCGGCACACCTGTGCCGTCCGGTACTGTCCTTCAAAAACCCATTTCAAAGGAAGTCGCCCCGAGACACTCGTCTCGGCACGCTCGCCCACACTGTGACACACATATGTGCCACAGGGTAGCTTACTTAGGCCACAGGGTAGCTTACTTAGGCCACAGGGCCCAGGGGTGGTGGAGAGCTAACACCATGGTACCCCTATAGTACATTTTGAGCCATTTTCATTCTATTAGGAGTAGACATGATTTTCGTGAGGTGTCATACGGTGTCGTGCATTGTCCGTCCAATGTCCGATTGACACCAAACTTGGCGAGCATTCATATTTCATATGGACGGACTTAACTCCCGAACCGCATGACCAAATTCCTTCTGAAACCTCGACTTTTGAGGTTAAGGCCCGGGGCCCTACCCGGCCCTTCAACAAGCCTATCTTGTCCTTCATGTCTATGCTGATGTCTCTGTTATGCTTGTGTCTCAATATGTCTTCAATGCCCACTTTGCGTGGTGGTGTGTTGGATGATGCATCGTCCTCCTCGATCGCATCATGGCATTCTTCTACGTTGGCCCGCATATGGCCGGATGGGCGTCTCTTGAGGGACGCCCCTTTTCTTGTCATGGCGTGAGGGTCACAACCTACTCTCTTCATAGTAAGGTTGTGACACTGGGCTCTTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGCAAACCTCTCCCTAGTAGATGCGTTTTAAAATCTTGAGGGGAAGCCCTTAAATGGAAAACCCAAAGAGGACAATATCTGCTAATGGTGCTAACGGTGCGTATGGGCTGTTACATCATCGGCCTCGATGCAGTGTGTGGTTAGCTTTAATCTGATGGTTACATGTAGCTTAAATAGATTTTAGACTTCCAGTTCAATTCAAATTGCATCAGAGTGACATAATTTCTTGCAAGTGCAGTTCAAACAGCAATGTTCCTGTCTGGCCTTTCCTAGGACTGTCTTTCTTTTTGGGTGCTTATGGTCTTCTTCCATATTTTGTACTTTGGAAGCCGCCGCCGCCCCCCGTTGAGGAAGATGAGCTCGAGAGATGGCCTTTGAATTTTCTCGAGTCGAAATTTACTGCTGGGGTATGGTAAATTCTTCCCCTTACCATGAATGTATCTGGAAGAAGATTGTGATGGTGCTCTCTTTATCTTTACCGTTGGCATAGCCAAATATTATTTTCAGAACCATCTCATGTTGAAACTAGTTTTGAAGAAACGTTGAAGACAGTAGCATAGCCACTATCTTTTCTGAAATCTGACCCTTTCTTCGCAATAAAAGTATCATCACGTAAGATCCCACATCGATTGGAGAGGGGAACGAAACATTTCTTATAATGGTGTGGAAACCTCTCCCTAATGAACGCATTTTAAAATCTTGAGGGGAATCCCAGAAGGGAAAGCTCAAAGAAGACAATATCTGCTAGTGGTAGGCTTGAGTTGGTACAAATGGTATTAGGGCTAGACACCGGATGGTGTGCCAACGAGGACGTTGGGTTCTCAAGGGGTAGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACGAAACATTTCTTATAAGAGTGTGGAAACCTCTTTCCAACGGTCTCAAGGGGGGTAGATTGTGAGATACCACGTCGGTTAGAGAGGGGGAACGAAACATTTCTTATAAGAGTATGGAAACCTCTCCCCAATGAACGCATTTTAAAACCTTGAGGGGAAGTTCAGAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGGTACAAATGTTATTAGAGCCAGACATTGGGGATTGTGCCAACAAGGACGCTGGGCTCTCAAAGGGGGTGGATTGTGATATCCCACATTGGTTGGAGAGGAAAACGAAACATTCCTCATAAGGGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAGAATTTTGAGAAGAAGCTCGGAAGGGAAAGTCCAAAGAGAACAATATCTGCTAGCGGTGGGCTTGAGCACACATCACTATTTTGCCCCAACCGTTCGATTAAAAATGAAAATTAACCAGGTTGGAATCAGATAACATTTGCTGCAGGACTAGGCTTATTATTCTATGCTGGATTAGCTGGTGAGAGTGCGTGGAAGGAATTCTATCAGTACTTCAGAGAAAGCAGATTTGTAAGTCTAGCAGTTTGTTTTTGGCATACTGTTATAGTTTTTTGCACCATGTCTTCATGTCTGTGGTGGGTACTCGCTATCTCGCGCTACCTATCGATTGTGTCGTTAAAACGCTTGATTTGTAGACTAGTTGAAGAACATTTTCTTGCTGCTGCTACTCCTGGAATCTGATTGATGATCAATAGTTTTGGTGTTTAGATATTTATATGAACTTTCTATCATTGCAACGTCATATAGCCTAACCTCGATCCCGAAACGTTGTTGATGCAGATCCATGCTACGAGCATTGATTTCATGCTGTTATCTTCATTTGCTCCATTTTGGGTTTACAATGACATGTCTGCTCGAAAATGGTTCGATTACCATCTTGTTCTAATCCTTCTTCCTTATTCAATTCTATGTTAGCCTTTTGGACATTAATGTTTCATATCATTGCAATGAACTCATTTCAGGTATGACCAAGGTTCTTGGCTTCTTCCATTTTCGTTGGTGCCGTTCTTGGGTCCTGCCTTGTATCTCGTCCTACGACCAATGCCAACGACGACTCCCGTTCCACTCGACCGTGCTGCTTCTGAACCGAAATGATCTTGGAAAAGTGAACTGCAAAAAGGAAACTTGGCTGTAATGGTGGAAAGTAGCTTCCAGGTAAAGGGAGAAGTTTTGTACTTCACACACGGTAGATTAGGAAACAGGGACGTGAAATGATTTGTGTTGTTATGTTATTATGTTTATGGCACAATATATTATTCTTCCAAGAGGGTTGATGTTGGCCATTCCATCCATATATTGTTCGGTTTGGCTTGCTACGTATCGCTGTCAGCCTCACGGTTTTAAAACACGTTTGCTAGAGAGAGGTTTCCACACCCTTATAAGAAATGTTTCGTTCCTCTTTCTAACCGACATGGGATCTCACAATCCACTCC TGAATGTGTGGTTCGACACTTGTTTTTCTATAATCAAGTTCAAGTCGGCCATGAATTGGTGACGGAAAAAGCTTCGGATTCTTATGTTTCTTCATCCGCTCCCGCCACCGTTCTAAAACCCACAAAACTTGTCGCCAATTCCTAATCAAAATCCAAATCCAAATTCAAACATGATACCCAATATCAATCTTATCTCCTGCAACTCTTTCTCACCGTCTCCTCCTTCAAGATTTTCAAAGCTTGGAATTCTCCATAAAACCCAAACTCGAAACCCCCAAATCATCCCCTTCAAGTATTCGACATCGGTCTGCCCCCGCATCAACACTCGTCGAGATTCAAGCTACAGAAAAGTGGGTCTGCTCCAAAAATGGCGGAGTGCATCGGGAACTCAGAATGCGGGTGACCCAGTTGGGGAAAAAGCGACGCCGGTGGAAAGTGAGCGCGGCGGTAGCAGCGGCGGCGGGAATGGTGGGGAGGGAAGAGACTGGACGACTTCGATTTTACTGTTTGTATTGTGGGCTGGTCTTATGTTTTATGTGTTCATTCTCGCTCCAAATCAGACTCCGTCAACGGACTTGTATTTCTTGAAGAAGCTTCTGAACTTGAAAAATGACGATGGTTTCAAAATGAATGAAGTGCTTGTCTCTCTTTGGTATATTATGGGGTTGTGGCCCCTTATCTACAGCATGCTGCTGCTTCCTTCTGGTAGAAGTTCAAACAGCAATGTTCCTGTCTGGCCTTTCCTAGGACTGTCTTTCTTTTTGGGTGCTTATGGTCTTCTTCCATATTTTGTACTTTGGAAGCCGCCGCCGCCCCCCGTTGAGGAAGATGAGCTCGAGAGATGGCCTTTGAATTTTCTCGAGTCGAAATTTACTGCTGGGATAACATTTGCTGCAGGACTAGGCTTATTATTCTATGCTGGATTAGCTGGTGAGAGTGCGTGGAAGGAATTCTATCAGTACTTCAGAGAAAGCAGATTTATCCATGCTACGAGCATTGATTTCATGCTGTTATCTTCATTTGCTCCATTTTGGGTTTACAATGACATGTCTGCTCGAAAATGGTATGACCAAGGTTCTTGGCTTCTTCCATTTTCGTTGGTGCCGTTCTTGGGTCCTGCCTTGTATCTCGTCCTACGACCAATGCCAACGACGACTCCCGTTCCACTCGACCGTGCTGCTTCTGAACCGAAATGATCTTGGAAAAGTGAACTGCAAAAAGGAAACTTGGCTGTAATGGTGGAAAGTAGCTTCCAGGTAAAGGGAGAAGTTTTGTACTTCACACACGGTAGATTAGGAAACAGGGACGTGAAATGATTTGTGTTGTTATGTTATTATGTTTATGGCACAATATATTATTCTTCCAAGAGGGTTGATGTTGGCCATTCCATCCATATATTGTTCGGTTTGGCTTGCTACGTATCGCTGTCAGCCTCACGGTTTTAAAACACGTTTGCTAGAGAGAGGTTTCCACACCCTTATAAGAAATGTTTCGTTCCTCTTTCTAACCGACATGGGATCTCACAATCCACTCC ATGATACCCAATATCAATCTTATCTCCTGCAACTCTTTCTCACCGTCTCCTCCTTCAAGATTTTCAAAGCTTGGAATTCTCCATAAAACCCAAACTCGAAACCCCCAAATCATCCCCTTCAAGTATTCGACATCGGTCTGCCCCCGCATCAACACTCGTCGAGATTCAAGCTACAGAAAAGTGGGTCTGCTCCAAAAATGGCGGAGTGCATCGGGAACTCAGAATGCGGGTGACCCAGTTGGGGAAAAAGCGACGCCGGTGGAAAGTGAGCGCGGCGGTAGCAGCGGCGGCGGGAATGGTGGGGAGGGAAGAGACTGGACGACTTCGATTTTACTGTTTGTATTGTGGGCTGGTCTTATGTTTTATGTGTTCATTCTCGCTCCAAATCAGACTCCGTCAACGGACTTGTATTTCTTGAAGAAGCTTCTGAACTTGAAAAATGACGATGGTTTCAAAATGAATGAAGTGCTTGTCTCTCTTTGGTATATTATGGGGTTGTGGCCCCTTATCTACAGCATGCTGCTGCTTCCTTCTGGTAGAAGTTCAAACAGCAATGTTCCTGTCTGGCCTTTCCTAGGACTGTCTTTCTTTTTGGGTGCTTATGGTCTTCTTCCATATTTTGTACTTTGGAAGCCGCCGCCGCCCCCCGTTGAGGAAGATGAGCTCGAGAGATGGCCTTTGAATTTTCTCGAGTCGAAATTTACTGCTGGGATAACATTTGCTGCAGGACTAGGCTTATTATTCTATGCTGGATTAGCTGGTGAGAGTGCGTGGAAGGAATTCTATCAGTACTTCAGAGAAAGCAGATTTATCCATGCTACGAGCATTGATTTCATGCTGTTATCTTCATTTGCTCCATTTTGGGTTTACAATGACATGTCTGCTCGAAAATGGTATGACCAAGGTTCTTGGCTTCTTCCATTTTCGTTGGTGCCGTTCTTGGGTCCTGCCTTGTATCTCGTCCTACGACCAATGCCAACGACGACTCCCGTTCCACTCGACCGTGCTGCTTCTGAACCGAAATGA
BLAST of CmoCh20G006830 vs. TrEMBL
Match: A0A0A0KA76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G113520 PE=4 SV=1) HSP 1 Score: 569.3 bits (1466), Expect = 3.1e-159 Identity = 282/343 (82.22%), Postives = 299/343 (87.17%), Query Frame = 1
BLAST of CmoCh20G006830 vs. TrEMBL
Match: D7TD94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g01260 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 4.7e-115 Identity = 217/343 (63.27%), Postives = 252/343 (73.47%), Query Frame = 1
BLAST of CmoCh20G006830 vs. TrEMBL
Match: A0A0D2QU44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G223100 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-111 Identity = 207/343 (60.35%), Postives = 252/343 (73.47%), Query Frame = 1
BLAST of CmoCh20G006830 vs. TrEMBL
Match: W9R168_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004861 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 8.6e-109 Identity = 215/359 (59.89%), Postives = 253/359 (70.47%), Query Frame = 1
BLAST of CmoCh20G006830 vs. TrEMBL
Match: A0A067KCI6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18524 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-108 Identity = 219/357 (61.34%), Postives = 249/357 (69.75%), Query Frame = 1
BLAST of CmoCh20G006830 vs. TAIR10
Match: AT2G04360.1 (AT2G04360.1 unknown protein) HSP 1 Score: 361.3 bits (926), Expect = 6.5e-100 Identity = 184/345 (53.33%), Postives = 234/345 (67.83%), Query Frame = 1
BLAST of CmoCh20G006830 vs. NCBI nr
Match: gi|449444464|ref|XP_004139994.1| (PREDICTED: uncharacterized protein LOC101218059 [Cucumis sativus]) HSP 1 Score: 569.3 bits (1466), Expect = 4.5e-159 Identity = 282/343 (82.22%), Postives = 299/343 (87.17%), Query Frame = 1
BLAST of CmoCh20G006830 vs. NCBI nr
Match: gi|659128327|ref|XP_008464155.1| (PREDICTED: uncharacterized protein LOC103502103 [Cucumis melo]) HSP 1 Score: 566.6 bits (1459), Expect = 2.9e-158 Identity = 284/349 (81.38%), Postives = 301/349 (86.25%), Query Frame = 1
BLAST of CmoCh20G006830 vs. NCBI nr
Match: gi|225447496|ref|XP_002265233.1| (PREDICTED: uncharacterized protein LOC100256200 [Vitis vinifera]) HSP 1 Score: 422.5 bits (1085), Expect = 6.8e-115 Identity = 217/343 (63.27%), Postives = 252/343 (73.47%), Query Frame = 1
BLAST of CmoCh20G006830 vs. NCBI nr
Match: gi|1009127758|ref|XP_015880864.1| (PREDICTED: uncharacterized protein LOC107416833 [Ziziphus jujuba]) HSP 1 Score: 420.2 bits (1079), Expect = 3.4e-114 Identity = 226/346 (65.32%), Postives = 255/346 (73.70%), Query Frame = 1
BLAST of CmoCh20G006830 vs. NCBI nr
Match: gi|698499431|ref|XP_009795543.1| (PREDICTED: uncharacterized protein LOC104242213 [Nicotiana sylvestris]) HSP 1 Score: 414.8 bits (1065), Expect = 1.4e-112 Identity = 205/310 (66.13%), Postives = 241/310 (77.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |