CmoCh20G006020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G006020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Dehydration responsive element binding transcription factor) (Dehydration-responsive element-binding protein 2A)
Location	Cmo_Chr20 : 2956077 .. 2956622 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAAATTAGAAAAATTACAAACTAGAAGGCCTGGATCTTTATCCGTGGCAGAGACTCTTGCAAAATGGAAAGATTACAACGATCACCTCGACTCATGTACTGATGAGGCGAAACTCACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAAGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAATGGGTTGCAGAAATTCGGGCACCAAAAAGGGGAAGTCGGCTGTGGTTAGGTACATTTCCAACTGCCATTGATGCGGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGGACTTCAGCTCGCCTGAATTTTCCCAATATCTCAATTCCAACCTTGCTAAAAGAAAAAGAATCACCACCAACAAAGGAATCTCCTTCTCCTGAAATCAAGAGGTCTTCAATCTCTTCTTTAGGGTCAACTTCACTTAGTCTGAGTTACGAGTCCACAATAACATCAGATCACTCTGAGGAAGGTGCAGCCGAAGATGTGTAG

mRNA sequence

ATGCCTAAATTAGAAAAATTACAAACTAGAAGGCCTGGATCTTTATCCGTGGCAGAGACTCTTGCAAAATGGAAAGATTACAACGATCACCTCGACTCATGTACTGATGAGGCGAAACTCACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAAGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAATGGGTTGCAGAAATTCGGGCACCAAAAAGGGGAAGTCGGCTGTGGTTAGGTACATTTCCAACTGCCATTGATGCGGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGGACTTCAGCTCGCCTGAATTTTCCCAATATCTCAATTCCAACCTTGCTAAAAGAAAAAGAATCACCACCAACAAAGGAATCTCCTTCTCCTGAAATCAAGAGGTCTTCAATCTCTTCTTTAGGGTCAACTTCACTTAGTCTGAGTTACGAGTCCACAATAACATCAGATCACTCTGAGGAAGGTGCAGCCGAAGATGTGTAG

Coding sequence (CDS)

ATGCCTAAATTAGAAAAATTACAAACTAGAAGGCCTGGATCTTTATCCGTGGCAGAGACTCTTGCAAAATGGAAAGATTACAACGATCACCTCGACTCATGTACTGATGAGGCGAAACTCACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAAGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAATGGGTTGCAGAAATTCGGGCACCAAAAAGGGGAAGTCGGCTGTGGTTAGGTACATTTCCAACTGCCATTGATGCGGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGGACTTCAGCTCGCCTGAATTTTCCCAATATCTCAATTCCAACCTTGCTAAAAGAAAAAGAATCACCACCAACAAAGGAATCTCCTTCTCCTGAAATCAAGAGGTCTTCAATCTCTTCTTTAGGGTCAACTTCACTTAGTCTGAGTTACGAGTCCACAATAACATCAGATCACTCTGAGGAAGGTGCAGCCGAAGATGTGTAG

Homology

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BLAST of CmoCh20G006020 vs. Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-39
Identity = 80/118 (67.80%), Postives = 96/118 (81.36%), Query Frame = 1


Query: 6   KLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGPENMRC 65
           K ++R  G+ +VAE L +WK+YN+ ++  + +    R+VPAKGSKKGCMKGKGGPEN RC
Sbjct: 22  KSRSRGDGT-TVAERLKRWKEYNETVEEVSTKK---RKVPAKGSKKGCMKGKGGPENSRC 81

Query: 66  NYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFP 124
           ++RGVRQR WGKWVAEIR P RGSRLWLGTFPTA +AA AYDEAA+AMYG  ARLNFP
Sbjct: 82  SFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFP 135

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BLAST of CmoCh20G006020 vs. Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 81/124 (65.32%), Postives = 96/124 (77.42%), Query Frame = 1


Query: 2   PKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCT--DEAKLTRRVPAKGSKKGCMKGKGG 61
           PK  K + R  G L+VA+ L KWK+YN+ +++    +  K  R+VPAKGSKKGCMKGKGG
Sbjct: 12  PKKRKSRARA-GGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71

Query: 62  PENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSAR 121
           P+N  C++RGVRQR WGKWVAEIR PK G+RLWLGTFPTA  AA AYDEAA AMYG+ AR
Sbjct: 72  PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131

Query: 122 LNFP 124
           LNFP
Sbjct: 132 LNFP 134

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BLAST of CmoCh20G006020 vs. Swiss-Prot
Match: DRE2B_ORYSJ (Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonica GN=DREB2B PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-38
Identity = 79/127 (62.20%), Postives = 92/127 (72.44%), Query Frame = 1


Query: 1   MPKLEKLQTRRP-----GSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMK 60
           MP ++  + +RP     G  SVAET+ +W + N+  +      K  R+ PAKGSKKGCMK
Sbjct: 18  MPPVQPGRKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARKAPAKGSKKGCMK 77

Query: 61  GKGGPENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYG 120
           GKGGPEN RC++RGVRQRTWGKWVAEIR P + SRLWLGTFPTA  AA AYDEAARAMYG
Sbjct: 78  GKGGPENTRCDFRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAMYG 137

Query: 121 TSARLNF 123
             AR NF
Sbjct: 138 PMARTNF 144

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BLAST of CmoCh20G006020 vs. Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-38
Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 1


Query: 3   KLEKLQTRRP--GSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 62
           ++ K +TRR   G  S+AET+  WK+ N  L     E   +R+ PAKGSKKGCM GKGGP
Sbjct: 14  QVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGP 73

Query: 63  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 122
           EN  C YRGVRQRTWGKWVAEIR P RG RLWLG+FPTA++AA AYDEAARAMYG +AR+
Sbjct: 74  ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARV 133

Query: 123 NFPNIS 127
           NF + S
Sbjct: 134 NFADNS 135

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BLAST of CmoCh20G006020 vs. Swiss-Prot
Match: DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-38
Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 1


Query: 3   KLEKLQTRRP--GSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 62
           ++ K +TRR   G  S+AET+  WK+ N  L     E   +R+ PAKGSKKGCM GKGGP
Sbjct: 14  QVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGP 73

Query: 63  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 122
           EN  C YRGVRQRTWGKWVAEIR P RG RLWLG+FPTA++AA AYDEAARAMYG +AR+
Sbjct: 74  ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARV 133

Query: 123 NFPNIS 127
           NF + S
Sbjct: 134 NFADNS 135

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BLAST of CmoCh20G006020 vs. TrEMBL
Match: A0A0A0KB02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124180 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 7.6e-80
Identity = 158/181 (87.29%), Postives = 164/181 (90.61%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDE KLTRRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           ENMRCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGT ARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPN+SIPTLLK KE   +++    EIKR S+S LGSTSLSLS ESTITSD SE+ A ED
Sbjct: 121 NFPNVSIPTLLKGKEL--SRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVED 179

Query: 181 V 182
           V
Sbjct: 181 V 179

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BLAST of CmoCh20G006020 vs. TrEMBL
Match: M5WWK2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022733mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.6e-56
Identity = 115/159 (72.33%), Postives = 127/159 (79.87%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           M KL K   R+ GS  VAETLAKWK YNDHLDSC DE+K  RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MTKLVKTDPRQDGSNPVAETLAKWKAYNDHLDSCNDESKPIRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN RCNYRGVRQRTWGKWVAEIR P RGSRLWLGTFPTAI+AALAYDEAARAMYG++ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRTPNRGSRLWLGTFPTAIEAALAYDEAARAMYGSAARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTS 160
           NFPNISI +L K+         PS     S++SSL +++
Sbjct: 121 NFPNISISSLSKD---------PSSRATLSAVSSLATSA 150

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BLAST of CmoCh20G006020 vs. TrEMBL
Match: V7BY01_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G111200g PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.7e-50
Identity = 106/180 (58.89%), Postives = 131/180 (72.78%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           M  L K  ++  GS S+A+ LAKWK+YN  LDSC D  K  R+VPAKGSKKGCMKGKGGP
Sbjct: 1   MHMLAKAHSKGDGSKSLAKILAKWKEYNAQLDSCKDADKPVRKVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN RCNYRGVRQRTWGKWVAEIR P RG+RLWLGTFPTAI AALAYDEAARAMYG+ ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPN+S+ +  +E     +K+SP        +++   +S+++S   ++ S  + EG  E+
Sbjct: 121 NFPNVSVSSFSEES----SKDSP--------VANHSGSSMAVSANESMVSPSNSEGGEEE 168

[Close]

BLAST of CmoCh20G006020 vs. TrEMBL
Match: A0A0A7MAR0_9FABA (DREB1 OS=Sophora moorcroftiana GN=DREB1 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.3e-49
Identity = 109/172 (63.37%), Postives = 125/172 (72.67%), Query Frame = 1


Query: 4   LEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGPENM 63
           L K Q++  GS S+A+ LAKWK+YN  LDS  D  K  R+VPAKGS+KGCMKGKGGPEN 
Sbjct: 2   LAKAQSKGDGSKSLAKILAKWKEYNAQLDSSNDADKPIRKVPAKGSRKGCMKGKGGPENS 61

Query: 64  RCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFP 123
           RCNYRGVRQRTWGKWVAEIR P RGSRLWLGTFPTAI AALAYDEAARAMYGT ARLNFP
Sbjct: 62  RCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGTCARLNFP 121

Query: 124 NISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEE 176
           N+S+ +  +E     +K+S       SS++ L +T    S ES I S    E
Sbjct: 122 NVSVSSFSEES----SKDSLGANQSGSSVTVLANTE---SMESPINSGADPE 166

[Close]

BLAST of CmoCh20G006020 vs. TrEMBL
Match: W6FHL7_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB2B PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-49
Identity = 110/181 (60.77%), Postives = 130/181 (71.82%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           MP+LE   +R  GS S+AETLAKW++YND L S     K   RVPAKGSKKGCMKGKGGP
Sbjct: 1   MPRLENRHSRGDGSKSLAETLAKWREYNDRLYSTEGVHKPIPRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN RC++RGVRQRTWGKWV+EIRAP RGSRLWLGTFPTAI+AALAYDEAARAMY + ARL
Sbjct: 61  ENSRCSFRGVRQRTWGKWVSEIRAPNRGSRLWLGTFPTAIEAALAYDEAARAMYSSCARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPNISI     +K+SP      +P +  S  +  GS       E + T ++ E+ A E+
Sbjct: 121 NFPNISISVSGLQKDSPSV---ATPSVSSSQATPAGS-------EFSGTPNNLEDCAGEE 171

Query: 181 V 182
           V
Sbjct: 181 V 171

[Close]

BLAST of CmoCh20G006020 vs. TAIR10
Match: AT5G05410.1 (AT5G05410.1 DRE-binding protein 2A)

HSP 1 Score: 164.5 bits (415), Expect = 6.2e-41
Identity = 80/118 (67.80%), Postives = 96/118 (81.36%), Query Frame = 1


Query: 6   KLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGPENMRC 65
           K ++R  G+ +VAE L +WK+YN+ ++  + +    R+VPAKGSKKGCMKGKGGPEN RC
Sbjct: 22  KSRSRGDGT-TVAERLKRWKEYNETVEEVSTKK---RKVPAKGSKKGCMKGKGGPENSRC 81

Query: 66  NYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFP 124
           ++RGVRQR WGKWVAEIR P RGSRLWLGTFPTA +AA AYDEAA+AMYG  ARLNFP
Sbjct: 82  SFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFP 135

[Close]

BLAST of CmoCh20G006020 vs. TAIR10
Match: AT3G11020.1 (AT3G11020.1 DRE/CRT-binding protein 2B)

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40
Identity = 81/124 (65.32%), Postives = 96/124 (77.42%), Query Frame = 1


Query: 2   PKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCT--DEAKLTRRVPAKGSKKGCMKGKGG 61
           PK  K + R  G L+VA+ L KWK+YN+ +++    +  K  R+VPAKGSKKGCMKGKGG
Sbjct: 12  PKKRKSRARA-GGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71

Query: 62  PENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSAR 121
           P+N  C++RGVRQR WGKWVAEIR PK G+RLWLGTFPTA  AA AYDEAA AMYG+ AR
Sbjct: 72  PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131

Query: 122 LNFP 124
           LNFP
Sbjct: 132 LNFP 134

[Close]

BLAST of CmoCh20G006020 vs. TAIR10
Match: AT2G40340.1 (AT2G40340.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 154.1 bits (388), Expect = 8.4e-38
Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 1


Query: 13  GSLSVAETLAKWKDYNDHLD--SCTDEA--KLTRRVPAKGSKKGCMKGKGGPENMRCNYR 72
           G+  VAE L +W++YN+ ++  SC D    K  R+ P KGS+KGCMKGKGGPEN  C+YR
Sbjct: 14  GTRDVAEILRQWREYNEQIEAESCIDGGGPKSIRKPPPKGSRKGCMKGKGGPENGICDYR 73

Query: 73  GVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFPNIS 127
           GVRQR WGKWVAEIR P  G+RLWLGTF ++ +AALAYDEAA+A+YG SARLN P I+
Sbjct: 74  GVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEIT 131

[Close]

BLAST of CmoCh20G006020 vs. TAIR10
Match: AT2G40350.1 (AT2G40350.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-37
Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHL--DSCTDE--AKLTRRVPAKGSKKGCMKG 60
           MP+  K +    G+  VAE L KW++YN+    DSC D   +K  R+ P K S+KGCMKG
Sbjct: 1   MPRKRKSR----GTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRKAPPKRSRKGCMKG 60

Query: 61  KGGPENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGT 120
           KGGPEN  C+Y GVRQRTWGKWVAEIR P RG++LWLGTF ++ +AALAYDEA++A+YG 
Sbjct: 61  KGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQ 120

Query: 121 SARLNFP 124
           SARLN P
Sbjct: 121 SARLNLP 123

[Close]

BLAST of CmoCh20G006020 vs. TAIR10
Match: AT2G38340.1 (AT2G38340.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 4.9e-30
Identity = 67/115 (58.26%), Postives = 74/115 (64.35%), Query Frame = 1


Query: 17  VAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGPENMRCNYRGVRQRTWG 76
           V  TL +W++         +     RRV AKGSKKGCM+GKGGPEN  C +RGVRQR WG
Sbjct: 29  VEATLQRWEE---------EGLARARRVQAKGSKKGCMRGKGGPENPVCRFRGVRQRVWG 88

Query: 77  KWVAEIRAP--------KRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFP 124
           KWVAEIR P         R  RLWLGTF TA +AALAYD AA  MYG  ARLNFP
Sbjct: 89  KWVAEIREPVSHRGANSSRSKRLWLGTFATAAEAALAYDRAASVMYGPYARLNFP 134

[Close]

BLAST of CmoCh20G006020 vs. NCBI nr
Match: gi|659113103|ref|XP_008456436.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 6.8e-82
Identity = 163/181 (90.06%), Postives = 167/181 (92.27%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           MPKL KLQTR PGSLSVAETLAKWKDYNDHLDSCTDEAKL RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLGKLQTRLPGSLSVAETLAKWKDYNDHLDSCTDEAKLARRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYG  ARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGNLARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPN+SIPTLLKEKE   TK+SP  EIKRSS+S LGSTSLSLS ESTITSDHSE+ A ED
Sbjct: 121 NFPNVSIPTLLKEKEL-STKDSPD-EIKRSSLSFLGSTSLSLSSESTITSDHSEDCAVED 179

Query: 181 V 182
           V
Sbjct: 181 V 179

[Close]

BLAST of CmoCh20G006020 vs. NCBI nr
Match: gi|778712752|ref|XP_011656930.1| (PREDICTED: dehydration-responsive element-binding protein 2A-like [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 158/181 (87.29%), Postives = 164/181 (90.61%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDE KLTRRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           ENMRCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGT ARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPN+SIPTLLK KE   +++    EIKR S+S LGSTSLSLS ESTITSD SE+ A ED
Sbjct: 121 NFPNVSIPTLLKGKEL--SRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVED 179

Query: 181 V 182
           V
Sbjct: 181 V 179

[Close]

BLAST of CmoCh20G006020 vs. NCBI nr
Match: gi|645248044|ref|XP_008230119.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Prunus mume])

HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58
Identity = 125/179 (69.83%), Postives = 136/179 (75.98%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           M KL K   R+ GS  VAETLAKWK YNDHLDSC DE+K  RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MTKLVKTDPRQDGSNPVAETLAKWKAYNDHLDSCNDESKPIRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAI+AALAYDEAARAMYG++ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIEAALAYDEAARAMYGSAARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAE 180
           NFPNISI +L K+  S  T  +PS              + S   ES+  SDHSEE AA+
Sbjct: 121 NFPNISISSLSKDPSSRATLSAPS------------LLATSAGSESSGRSDHSEECAAQ 167

[Close]

BLAST of CmoCh20G006020 vs. NCBI nr
Match: gi|658053032|ref|XP_008362249.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Malus domestica])

HSP 1 Score: 231.9 bits (590), Expect = 9.0e-58
Identity = 123/180 (68.33%), Postives = 133/180 (73.89%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           MPKL K   RR G   VAETLAKWK+YNDHLDSC DE    RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLVKTDXRRDGPNPVAETLAKWKEYNDHLDSCNDEGGPFRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN RCNYRGVRQRTWGKWVAEIR P RGSRLWLGTFPTAI+AALAYDEAARAMY ++ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRTPNRGSRLWLGTFPTAIEAALAYDEAARAMYXSAARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPNISI TL K+  S  T            +S L   + S   ES+  SDHS + AA+D
Sbjct: 121 NFPNISISTLSKDSSSTKT------------LSXLPLLASSAGSESSARSDHSGDCAAQD 168

[Close]

BLAST of CmoCh20G006020 vs. NCBI nr
Match: gi|694330745|ref|XP_009356066.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Pyrus x bretschneideri])

HSP 1 Score: 231.1 bits (588), Expect = 1.5e-57
Identity = 122/180 (67.78%), Postives = 135/180 (75.00%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60
           MPKL K+ TRR G   VA+TLAKWK+YNDHLDSC DE    RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLVKIDTRRDGPNPVAKTLAKWKEYNDHLDSCNDEVGPFRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN RCNYRGVRQRTWGKWVAEIR P RGSRLWLGTFPTAI+AALAYDEAARA+Y ++ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRTPNRGSRLWLGTFPTAIEAALAYDEAARAVYCSAARL 120

Query: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180
           NFPNISI TL K+  S  T            +SSL   + S   ES+  SDHS + A +D
Sbjct: 121 NFPNISISTLSKDSSSTKT------------LSSLPLLASSAGSESSARSDHSGDCADQD 168

The following BLAST results are available for this feature:

BLAST of CmoCh20G006020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRE2A_ARATH	1.1e-39	67.80	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DRE...	[more]
DRE2B_ARATH	2.5e-39	65.32	Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DRE...	[more]
DRE2B_ORYSJ	2.7e-38	62.20	Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonic...	[more]
DRE2A_ORYSI	3.6e-38	63.49	Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica ...	[more]
DRE2A_ORYSJ	3.6e-38	63.49	Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonic...	[more]

BLAST of CmoCh20G006020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB02_CUCSA	7.6e-80	87.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124180 PE=4 SV=1	[more]
M5WWK2_PRUPE	2.6e-56	72.33	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022733mg PE=4 S...	[more]
V7BY01_PHAVU	3.7e-50	58.89	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G111200g PE=4 SV=1	[more]
A0A0A7MAR0_9FABA	5.3e-49	63.37	DREB1 OS=Sophora moorcroftiana GN=DREB1 PE=2 SV=1	[more]
W6FHL7_9ROSA	6.9e-49	60.77	Dehydration responsive element binding transcription factor OS=Morus notabilis G...	[more]

BLAST of CmoCh20G006020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05410.1	6.2e-41	67.80	DRE-binding protein 2A	[more]
AT3G11020.1	1.4e-40	65.32	DRE/CRT-binding protein 2B	[more]
AT2G40340.1	8.4e-38	62.71	Integrase-type DNA-binding superfamily protein	[more]
AT2G40350.1	5.5e-37	59.84	Integrase-type DNA-binding superfamily protein	[more]
AT2G38340.1	4.9e-30	58.26	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CmoCh20G006020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113103\|ref\|XP_008456436.1\|	6.8e-82	90.06	PREDICTED: putative dehydration-responsive element-binding protein 2H [Cucumis m...	[more]
gi\|778712752\|ref\|XP_011656930.1\|	1.1e-79	87.29	PREDICTED: dehydration-responsive element-binding protein 2A-like [Cucumis sativ...	[more]
gi\|645248044\|ref\|XP_008230119.1\|	1.4e-58	69.83	PREDICTED: putative dehydration-responsive element-binding protein 2H [Prunus mu...	[more]
gi\|658053032\|ref\|XP_008362249.1\|	9.0e-58	68.33	PREDICTED: putative dehydration-responsive element-binding protein 2H [Malus dom...	[more]
gi\|694330745\|ref\|XP_009356066.1\|	1.5e-57	67.78	PREDICTED: putative dehydration-responsive element-binding protein 2H [Pyrus x b...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G006020.1	CmoCh20G006020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 67..78 score: 7.9E-10coord: 89..105 score: 7.9
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 66..124 score: 4.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 65..115 score: 2.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 66..129 score: 7.8
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 66..123 score: 21
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 66..123 score: 6.41
None	No IPR available	PANTHER	PTHR31241	FAMILY NOT NAMED	coord: 10..128 score: 1.1
None	No IPR available	PANTHER	PTHR31241:SF2	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED	coord: 10..128 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G006020	CmaCh20G006450	Cucurbita maxima (Rimu)	cmacmoB552
CmoCh20G006020	ClCG02G011160	Watermelon (Charleston Gray)	cmowcgB498
CmoCh20G006020	Cp4.1LG16g04720	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G006020	Cp4.1LG05g14530	Cucurbita pepo (Zucchini)	cmocpeB536
CmoCh20G006020	Cla97C02G036920	Watermelon (97103) v2	cmowmbB565
CmoCh20G006020	Bhi10G000932	Wax gourd	cmowgoB0694

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G006020	Cucumber (Gy14) v2	cgybcmoB937
CmoCh20G006020	Melon (DHL92) v3.6.1	cmomedB575
CmoCh20G006020	Melon (DHL92) v3.6.1	cmomedB577
CmoCh20G006020	Silver-seed gourd	carcmoB0043
CmoCh20G006020	Silver-seed gourd	carcmoB0464
CmoCh20G006020	Silver-seed gourd	carcmoB1184
CmoCh20G006020	Cucumber (Chinese Long) v3	cmocucB0672
CmoCh20G006020	Watermelon (97103) v2	cmowmbB552
CmoCh20G006020	Wax gourd	cmowgoB0681
CmoCh20G006020	Cucurbita moschata (Rifu)	cmocmoB381
CmoCh20G006020	Cucurbita moschata (Rifu)	cmocmoB406
CmoCh20G006020	Cucumber (Gy14) v1	cgycmoB0408
CmoCh20G006020	Cucurbita maxima (Rimu)	cmacmoB517
CmoCh20G006020	Cucurbita maxima (Rimu)	cmacmoB608
CmoCh20G006020	Wild cucumber (PI 183967)	cmocpiB568
CmoCh20G006020	Cucumber (Chinese Long) v2	cmocuB562
CmoCh20G006020	Melon (DHL92) v3.5.1	cmomeB504
CmoCh20G006020	Watermelon (Charleston Gray)	cmowcgB484
CmoCh20G006020	Watermelon (97103) v1	cmowmB526
CmoCh20G006020	Cucurbita pepo (Zucchini)	cmocpeB515
CmoCh20G006020	Cucurbita pepo (Zucchini)	cmocpeB525
CmoCh20G006020	Bottle gourd (USVL1VR-Ls)	cmolsiB499