CmoCh20G005920 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G005920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCyclin d, putative
LocationCmo_Chr20 : 2914881 .. 2916664 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCATCATCACTTCCTCTTCTTCTTCTTTAAACCATGCCTTCCCTCTTCCACCACCACTCTCTCTCCCATTCAACATCTTCCCTTCTCTCCCTCTCCATGGACTTCGATCTCGAAAACCCATTCACCCATCTCCACCACCCTCACTCCTCCGACGCCGCCACTCTCTTCCTCATCGAGTCCGATCACATGCTCTCTCCAACCTACCTCCACACCCTTCATTCTTCTCCTACTGATTCCTCTGTTCGACGGGACACCATTTCTTTAATCTCTCAGGTAACCCATTTCTTCTTCTGTTCTTTAACTCCTCCAAATGGCCTTCTTTCCCCTGATTCTCTCTCTCATTTGCAGTGCTGTTGTAGCTGTAACATCGATCCACACTTGTCGTACCTTGCCGTCAATTACCTCGATCGCTTCTTCTCCTTTCAGGGAGTGCCGGTAATGTCTTTTCACTGAAACTAAAACAGAGCGTTCGTTCTTCCCCTGTTTCCCCTGTTTTGAAAATTGTTGTTCGTTATTTACAGCAACCAAAGCCATGGGTCTTGAGGCTTCTTGCCGTCTCTTGTGTTTCTCTCGCTGCCAAAATGAAGCAAACAGAGCACAATCTCTTCGATTTTCAGGTATTATTGAACAAGTAGGCAATACCCAAATGGCAAAAGCAGAGCTGACTCTGTTTTTTTGAAACAGGGGAATGAAGGCTTCATTTTTGATCCCCAAACAGTACACAGGATGGAATCTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCCATCACTCCCTTCTCCTTCGTCCCTTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTGTTGCAAGCTCTCAAGGCCAGAGCTACAGAGATCATCTTCATAGCTCAAAATGGTAATGAATTAAAAATCTAAAAAAGGAACTTTTTTTCTTCACATTCTTGCTGCATCAATCAACAGACATTGTGTTTGCTTCTTTGTTCGTAGGGATTGAGCTTTTGGAGTTCAAGCCATCAGTAATTGCAGCCTCTGCTCTGCTCTCCGCCGCACACGAGCTCTTCCCAATCCAATATCCATGCTTCAGAAAAGCAATTCTCAACTGTTCATACGTTAATAAAGTAAATACCCCACTTTCCTCTTTTATGTTAAAATTCATTAAAACAGAGAGACAGAGAGACAGAGAGACAGAGAGAGAGAGGAGAATGCAATAAATGCAATCTTAAATTAGAGAAATATATAATTGGGAGATTGTGATTAAAAAGGACTGCGGGTGGTGCAGGAGGAGGAAGAGGAAATGTTGGGGAGATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGAGGAGGATTGGATATAGAACAGAGGTCGGACACGGCGGCCAATGTGCTGGACCACCATTTCTCGAGCTCTGAAAGTGAAAACACGTTCATGGGCACATCCTCCTCCGCCTCCGCCGTGACGAACAGAGCAGATAAGGATGGGAAGAAGAGAAAGGTGGGTGTTAGGCAGAGCAAGAATGAGAGGTGTATACAGCACTGTTGATGAGACGACGATGAGGATGGCAATGGCAGAATAGTTTTGGTTTGTTTGGTTTGGTATTGTATGTAATGTAATGTAATGGGTAGAACAATGGGGAAAAGAAGGAATTTGTGTTCCTTTTTTGTTGGGTTTCTTGGGACCAAAGAAAGACAAAACATAGCTTTGAAGTAGTGAGGCCGTTGTGGTGGTGGTCGGGCGTTGGATTTGTGTTTTGGGTTTTAGAGTGGTTTCTGTCGCTTAG

mRNA sequence

TTCTCATCATCACTTCCTCTTCTTCTTCTTTAAACCATGCCTTCCCTCTTCCACCACCACTCTCTCTCCCATTCAACATCTTCCCTTCTCTCCCTCTCCATGGACTTCGATCTCGAAAACCCATTCACCCATCTCCACCACCCTCACTCCTCCGACGCCGCCACTCTCTTCCTCATCGAGTCCGATCACATGCTCTCTCCAACCTACCTCCACACCCTTCATTCTTCTCCTACTGATTCCTCTGTTCGACGGGACACCATTTCTTTAATCTCTCAGTGCTGTTGTAGCTGTAACATCGATCCACACTTGTCGTACCTTGCCGTCAATTACCTCGATCGCTTCTTCTCCTTTCAGGGAGTGCCGCAACCAAAGCCATGGGTCTTGAGGCTTCTTGCCGTCTCTTGTGTTTCTCTCGCTGCCAAAATGAAGCAAACAGAGCACAATCTCTTCGATTTTCAGGGGAATGAAGGCTTCATTTTTGATCCCCAAACAGTACACAGGATGGAATCTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCCATCACTCCCTTCTCCTTCGTCCCTTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTGTTGCAAGCTCTCAAGGCCAGAGCTACAGAGATCATCTTCATAGCTCAAAATGGGATTGAGCTTTTGGAGTTCAAGCCATCAGTAATTGCAGCCTCTGCTCTGCTCTCCGCCGCACACGAGCTCTTCCCAATCCAATATCCATGCTTCAGAAAAGCAATTCTCAACTGTTCATACGTTAATAAAGAGGAGGAAGAGGAAATGTTGGGGAGATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGAGGAGGATTGGATATAGAACAGAGGTCGGACACGGCGGCCAATGTGCTGGACCACCATTTCTCGAGCTCTGAAAGTGAAAACACGTTCATGGGCACATCCTCCTCCGCCTCCGCCGTGACGAACAGAGCAGATAAGGATGGGAAGAAGAGAAAGGTGGGTGTTAGGCAGAGCAAGAATGAGAGAGTGGTTTCTGTCGCTTAG

Coding sequence (CDS)

ATGCCTTCCCTCTTCCACCACCACTCTCTCTCCCATTCAACATCTTCCCTTCTCTCCCTCTCCATGGACTTCGATCTCGAAAACCCATTCACCCATCTCCACCACCCTCACTCCTCCGACGCCGCCACTCTCTTCCTCATCGAGTCCGATCACATGCTCTCTCCAACCTACCTCCACACCCTTCATTCTTCTCCTACTGATTCCTCTGTTCGACGGGACACCATTTCTTTAATCTCTCAGTGCTGTTGTAGCTGTAACATCGATCCACACTTGTCGTACCTTGCCGTCAATTACCTCGATCGCTTCTTCTCCTTTCAGGGAGTGCCGCAACCAAAGCCATGGGTCTTGAGGCTTCTTGCCGTCTCTTGTGTTTCTCTCGCTGCCAAAATGAAGCAAACAGAGCACAATCTCTTCGATTTTCAGGGGAATGAAGGCTTCATTTTTGATCCCCAAACAGTACACAGGATGGAATCTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCCATCACTCCCTTCTCCTTCGTCCCTTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTGTTGCAAGCTCTCAAGGCCAGAGCTACAGAGATCATCTTCATAGCTCAAAATGGGATTGAGCTTTTGGAGTTCAAGCCATCAGTAATTGCAGCCTCTGCTCTGCTCTCCGCCGCACACGAGCTCTTCCCAATCCAATATCCATGCTTCAGAAAAGCAATTCTCAACTGTTCATACGTTAATAAAGAGGAGGAAGAGGAAATGTTGGGGAGATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGAGGAGGATTGGATATAGAACAGAGGTCGGACACGGCGGCCAATGTGCTGGACCACCATTTCTCGAGCTCTGAAAGTGAAAACACGTTCATGGGCACATCCTCCTCCGCCTCCGCCGTGACGAACAGAGCAGATAAGGATGGGAAGAAGAGAAAGGTGGGTGTTAGGCAGAGCAAGAATGAGAGAGTGGTTTCTGTCGCTTAG
Homology
[Close]
BLAST of CmoCh20G005920 vs. Swiss-Prot
Match: CCD61_ARATH (Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-63
Identity = 151/323 (46.75%), Postives = 207/323 (64.09%), Query Frame = 1 

Query: 22  MDFDLENPFTH--LHHPHSSDAA------TLFLIESDHMLSPTYLHTLHSSPTDSSVRRD 81
           M+F LE+P +H  LH+  + D        +LFL+E  HM S  Y H+L SS    S R  
Sbjct: 1   MEFHLEHPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQ 60

Query: 82  TISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQT 141
            IS I+Q     + DP L+YLAVNYLDRF S + +PQ KPW+L+L+++SCVSL+AKM++ 
Sbjct: 61  AISSITQYSRKFD-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKP 120

Query: 142 EHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLR--DPPL 201
           + ++ D    EG  FD Q + RME++ILGALKWRMRS+TPFSF+ FFISLF+L+  DP L
Sbjct: 121 DMSVSDLP-VEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLL 180

Query: 202 LQ-ALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYV 261
           L+ +LK++ +++ F  Q+ I  LEFKPSVIA +ALL A+ EL P+Q+PCF   I  C+YV
Sbjct: 181 LKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYV 240

Query: 262 NKEEEEEMLGRCFKAVQE-IVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTS 321
           NK+E    L  C+KA+QE  +I G   G       ++TA NVLD  FSS ES+ +   T+
Sbjct: 241 NKDE----LMECYKAIQERDIIVGENEGS------TETAVNVLDQQFSSCESDKSITITA 300

Query: 322 SSASAVTNRADKDGKKRKVGVRQ 333
           SS+           K+RK   R+
Sbjct: 301 SSSP----------KRRKTSTRR 301

[Close]
BLAST of CmoCh20G005920 vs. Swiss-Prot
Match: CCD61_ORYSJ (Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.4e-37
Identity = 117/314 (37.26%), Postives = 167/314 (53.18%), Query Frame = 1 

Query: 23  DFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQCC 82
           +FDLENPFT    P     A+L   E  H  SP+       S   S+ RR+    IS+  
Sbjct: 19  EFDLENPFTS---PADEPIASLLDAEGHH--SPSV------SAAASAARREAAGFISKVR 78

Query: 83  CSCNID--PHLSYLAVNYLDRFFSFQGVP-QPKPWVLRLLAVSCVSLAAKMKQTEH-NLF 142
               +D  P ++YLA+NY+DR+ S + +  +  PW  RLLA+SC++LAAKM++    +  
Sbjct: 79  YDGELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAA 138

Query: 143 DFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLF--KLRDPPLLQALK 202
           D Q  E F+FD   + RME ++L AL+WR RS+TP +F+ FF+S    + R P LL A+K
Sbjct: 139 DIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIK 198

Query: 203 ARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEE 262
           ARA +++   Q  +++ EF PSV AA+ALL+AA E+       F   +  C +VN E+  
Sbjct: 199 ARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLR 258

Query: 263 EMLGRCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFS-SSESENTFMGTSSSASAV 322
           E  G    A       G           ++T   VL HH S SSESE T    S++ SA 
Sbjct: 259 E-CGEVMAAA-----CGVGPSWAAAATSAETPVTVLGHHRSASSESERTTTVGSAANSA- 308

Query: 323 TNRADKDGKKRKVG 330
                 D K+R +G
Sbjct: 319 ------DAKRRCMG 308

[Close]
BLAST of CmoCh20G005920 vs. Swiss-Prot
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.1e-31
Identity = 78/193 (40.41%), Postives = 116/193 (60.10%), Query Frame = 1 

Query: 48  ESDHMLSPTYLHTLHSSPTDSSV-RRDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQ 107
           E  H+ S  Y+  L S   D +V RRD ++ I + C      P    LA+NYLDRF S  
Sbjct: 54  EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVH 113

Query: 108 GVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQTVHRMESLILGAL 167
            +P  K W+L+LLAV+C+SLAAK+++TE   L D Q G+  F+F+ ++V RME L+L  L
Sbjct: 114 DLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKL 173

Query: 168 KWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKPSVIAASA 227
           KWR+R+ITP S++ +F+      D      L +R+ ++I     GI+ LEF+PS +AA+ 
Sbjct: 174 KWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAV 233

Query: 228 LLSAAHELFPIQY 238
            LS + EL  + +
Sbjct: 234 ALSVSGELQRVHF 246

[Close]
BLAST of CmoCh20G005920 vs. Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 5.7e-29
Identity = 86/238 (36.13%), Postives = 125/238 (52.52%), Query Frame = 1 

Query: 36  PHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSS----VRRDTISLISQCCCSCNIDPHL 95
           P     A L   E+DHM    Y   L +   D      VR D I  I +     +  P  
Sbjct: 64  PSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLT 123

Query: 96  SYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFD 155
           + LAVNYLDRF S   +P  K W+ +LLAV+C+SLAAKM++T+     D Q G E ++F+
Sbjct: 124 ACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFE 183

Query: 156 PQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNG 215
            +T+ RME L+L  LKWRM+++TPFS+V +F+      DPP  ++    ++E+I     G
Sbjct: 184 AKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRS-ALLSSELILCIARG 243

Query: 216 IELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEEEMLGRCFKAVQ 268
            E L F+PS IAA+   +   E    ++  F       S+VNKE     +  C + +Q
Sbjct: 244 TECLGFRPSEIAAAVAAAVVGE----EHAAF-------SHVNKER----MSHCQEVIQ 285

[Close]
BLAST of CmoCh20G005920 vs. Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 127.5 bits (319), Expect = 2.8e-28
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 1 

Query: 40  DAATLFLIESDHML-SPTYLHTLHSSPTDSSVRRDTISLISQCCCSCNIDPHLSYLAVNY 99
           D+   F+ +  H +    YL    +   D+S R D+++ I +     N  P  +YLAVNY
Sbjct: 50  DSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNY 109

Query: 100 LDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQ-TEHNLFDFQ-GNEGFIFDPQTVHRM 159
           +DRF   + +P+   W ++LLAV+C+SLAAKM++    +LFDFQ     ++F+ +T+ RM
Sbjct: 110 MDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRM 169

Query: 160 ESLILGALKWRMRSITPFSFVPFFISLFKLRDP--PLLQALKARATEIIFIAQNGIELLE 219
           E L+L  L WR+RS+TPF F+ FF   +K+ DP    L    + ATEII         LE
Sbjct: 170 ELLVLSVLDWRLRSVTPFDFISFF--AYKI-DPSGTFLGFFISHATEIILSNIKEASFLE 229

Query: 220 FKPSVIAASALLSAAHEL 233
           + PS IAA+A+L  A+EL
Sbjct: 230 YWPSSIAAAAILCVANEL 244

[Close]
BLAST of CmoCh20G005920 vs. TrEMBL
Match: A0A0A0KCV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121960 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.5e-110
Identity = 201/231 (87.01%), Postives = 212/231 (91.77%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDFDLENP THLH  HS DA+ LFL ESDHMLSP+YLHTL +SP+D +VRRDTI  ISQC
Sbjct: 1   MDFDLENPLTHLHQLHSDDAS-LFLTESDHMLSPSYLHTLLTSPSDFAVRRDTIYFISQC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           C + NIDPHLSYLAVNYLDRFFSFQG+PQPKPWVLRLLAVSCVSLAAKMKQ EHNL DFQ
Sbjct: 61  CSNSNIDPHLSYLAVNYLDRFFSFQGMPQPKPWVLRLLAVSCVSLAAKMKQIEHNLSDFQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+EGFIFDPQTVHRME LILGALKWRMRSITPFSF+PFF SLFKLRDPPLLQALK RATE
Sbjct: 121 GSEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFIPFFSSLFKLRDPPLLQALKGRATE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNK 253
           IIFIAQNGIELLEFK SVIAA+ALLSAAHELFPIQYPCFRKAI+NCSYV K
Sbjct: 181 IIFIAQNGIELLEFKASVIAAAALLSAAHELFPIQYPCFRKAIINCSYVKK 230

[Close]
BLAST of CmoCh20G005920 vs. TrEMBL
Match: B9INU6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14110g PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.5e-92
Identity = 189/309 (61.17%), Postives = 223/309 (72.17%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDF+LENP T+ H  H     +LFLIESDHM S  YL TL     D S RR+ IS + + 
Sbjct: 1   MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVLRV 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
             SCN DP LSYLAVNYLDRF S QG+PQPKPWV +LLAV+CVSLAAKMK+ E  + D Q
Sbjct: 61  --SCNFDPSLSYLAVNYLDRFLSSQGIPQPKPWVFKLLAVACVSLAAKMKEAEFYVTDIQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+ GF+FDPQT+ +ME LILGAL WRMRSITPFSF+ FFISLFK +DPPL QALKARA E
Sbjct: 121 GDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEEEMLGR 261
           IIF AQN I LLEF+PS+ AASALL A HELFP+Q+ CFRKAI  CSYVNKE     L +
Sbjct: 181 IIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISICSYVNKEN----LLQ 240

Query: 262 CFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRA-- 321
           C+ A+QE  ++GY +   D+   SDT  NVLD HFSSSESENT       +S  +N+   
Sbjct: 241 CYNAMQETAMDGY-KSQFDMVSSSDTPVNVLDRHFSSSESENTNGTVVMISSNGSNKTWP 300

Query: 322 DKDGKKRKV 329
           +K  K+RK+
Sbjct: 301 EKGIKRRKI 302

[Close]
BLAST of CmoCh20G005920 vs. TrEMBL
Match: G9BZV3_POPCA (D6-type cyclin OS=Populus canadensis GN=CYCD6;4 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.5e-92
Identity = 189/309 (61.17%), Postives = 224/309 (72.49%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDF+LENP T+ H  H     +LFLIESDHM S  YL TL     D S RR+ IS + + 
Sbjct: 1   MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVFRV 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
             SCN DP LSYLAVNYLDRF S QG+PQPKPWVL+LLAV+CVSLAAKMK+ E  + D Q
Sbjct: 61  --SCNFDPSLSYLAVNYLDRFLSSQGIPQPKPWVLKLLAVACVSLAAKMKEAEFYVTDIQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+ GF+FDPQT+ +ME LILGAL WRMRSITPFSF+ FFISLFK +DPPL QALKARA E
Sbjct: 121 GDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEEEMLGR 261
           IIF AQN I LLEF+PS+ AASALL A HELFP+Q+ CFRKAI  CS+VNKE     L +
Sbjct: 181 IIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISICSHVNKEN----LLQ 240

Query: 262 CFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRA-- 321
           C+ A+QE  ++GY +   D+   SDT  NVLD HF SSESENT       +S  +N+   
Sbjct: 241 CYNAMQETAMDGY-KSQFDMVSSSDTPVNVLDRHFLSSESENTNGTVVMISSDGSNKTWP 300

Query: 322 DKDGKKRKV 329
           +KD K+RK+
Sbjct: 301 EKDIKRRKI 302

[Close]
BLAST of CmoCh20G005920 vs. TrEMBL
Match: A8Y921_POPTR (D6-type cyclin OS=Populus trichocarpa GN=CYCD6;4 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.5e-92
Identity = 189/309 (61.17%), Postives = 223/309 (72.17%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDF+LENP T+ H  H     +LFLIESDHM S  YL TL     D S RR+ IS + + 
Sbjct: 1   MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVLRV 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
             SCN DP LSYLAVNYLDRF S QG+PQPKPWV +LLAV+CVSLAAKMK+ E  + D Q
Sbjct: 61  --SCNFDPSLSYLAVNYLDRFLSSQGIPQPKPWVFKLLAVACVSLAAKMKEAEFYVTDIQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+ GF+FDPQT+ +ME LILGAL WRMRSITPFSF+ FFISLFK +DPPL QALKARA E
Sbjct: 121 GDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEEEMLGR 261
           IIF AQN I LLEF+PS+ AASALL A HELFP+Q+ CFRKAI  CSYVNKE     L +
Sbjct: 181 IIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISICSYVNKEN----LLQ 240

Query: 262 CFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRA-- 321
           C+ A+QE  ++GY +   D+   SDT  NVLD HFSSSESENT       +S  +N+   
Sbjct: 241 CYNAMQETAMDGY-KSQFDMVSSSDTPVNVLDRHFSSSESENTNGTVVMISSNGSNKTWP 300

Query: 322 DKDGKKRKV 329
           +K  K+RK+
Sbjct: 301 EKGIKRRKI 302

[Close]
BLAST of CmoCh20G005920 vs. TrEMBL
Match: M5WUJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008931mg PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 6.9e-90
Identity = 184/317 (58.04%), Postives = 229/317 (72.24%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           M+FDLENP T  H  HS    ++F +ESDHM S  Y  T+ +   D S+RR+ I+ ISQ 
Sbjct: 1   MEFDLENPLTISHDIHSDTLTSMFSLESDHMPSEIYFQTVQARDFDISIRREAIASISQL 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           CC  N D  L YLAVNYLDRF S QG+ QPKPW+++LLA+SCVSLAAKMK+ + +L D Q
Sbjct: 61  CC--NYDNLLQYLAVNYLDRFLSCQGMLQPKPWLIKLLAISCVSLAAKMKKADFSLADVQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+   IFD QT+ RME LILGALKWRMRSITPFSF+ FF SLFKL DPPLLQALKARA +
Sbjct: 121 GDGRIIFDTQTIQRMEVLILGALKWRMRSITPFSFISFFNSLFKLEDPPLLQALKARAAQ 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEEEMLGR 261
           IIF +Q  +ELL FKPS+IAASALLSA+HELFP+QYPCF+KA+ NCSYVNKE     + +
Sbjct: 181 IIFKSQKDVELLGFKPSIIAASALLSASHELFPMQYPCFKKALSNCSYVNKEN----MLQ 240

Query: 262 CFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRADK 321
           C+ A+Q+IV +G++   L++   S TAANVLDH+FSSS       GT++       R +K
Sbjct: 241 CYSAMQDIVADGFD-SVLEMVSSSVTAANVLDHNFSSSAES----GTTTVTGMTPLRLEK 300

Query: 322 DGKKRKVGVRQSKNERV 339
           D K+RK+     K+ RV
Sbjct: 301 DMKRRKIS-EYCKDHRV 305

[Close]
BLAST of CmoCh20G005920 vs. TAIR10
Match: AT4G03270.1 (AT4G03270.1 Cyclin D6;1)

HSP 1 Score: 245.0 bits (624), Expect = 6.8e-65
Identity = 151/323 (46.75%), Postives = 207/323 (64.09%), Query Frame = 1 

Query: 22  MDFDLENPFTH--LHHPHSSDAA------TLFLIESDHMLSPTYLHTLHSSPTDSSVRRD 81
           M+F LE+P +H  LH+  + D        +LFL+E  HM S  Y H+L SS    S R  
Sbjct: 1   MEFHLEHPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQ 60

Query: 82  TISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQT 141
            IS I+Q     + DP L+YLAVNYLDRF S + +PQ KPW+L+L+++SCVSL+AKM++ 
Sbjct: 61  AISSITQYSRKFD-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKP 120

Query: 142 EHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLR--DPPL 201
           + ++ D    EG  FD Q + RME++ILGALKWRMRS+TPFSF+ FFISLF+L+  DP L
Sbjct: 121 DMSVSDLP-VEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLL 180

Query: 202 LQ-ALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYV 261
           L+ +LK++ +++ F  Q+ I  LEFKPSVIA +ALL A+ EL P+Q+PCF   I  C+YV
Sbjct: 181 LKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYV 240

Query: 262 NKEEEEEMLGRCFKAVQE-IVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTS 321
           NK+E    L  C+KA+QE  +I G   G       ++TA NVLD  FSS ES+ +   T+
Sbjct: 241 NKDE----LMECYKAIQERDIIVGENEGS------TETAVNVLDQQFSSCESDKSITITA 300

Query: 322 SSASAVTNRADKDGKKRKVGVRQ 333
           SS+           K+RK   R+
Sbjct: 301 SSSP----------KRRKTSTRR 301

[Close]
BLAST of CmoCh20G005920 vs. TAIR10
Match: AT5G65420.3 (AT5G65420.3 CYCLIN D4;1)

HSP 1 Score: 132.1 bits (331), Expect = 6.5e-31
Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 1 

Query: 48  ESDHMLSPTYLHTLHSSPTDSSV-RRDTISLISQCCCSCNID----------PHLSYLAV 107
           E  H+ S  Y+  L S   D +V RRD ++ I +    C  D          P    LA+
Sbjct: 54  EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVHQFGPLCFCLAM 113

Query: 108 NYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQTVH 167
           NYLDRF S   +P  K W+L+LLAV+C+SLAAK+++TE   L D Q G+  F+F+ ++V 
Sbjct: 114 NYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQ 173

Query: 168 RMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLE 227
           RME L+L  LKWR+R+ITP S++ +F+      D      L +R+ ++I     GI+ LE
Sbjct: 174 RMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLE 233

Query: 228 FKPSVIAASALLSAAHELFPIQY 238
           F+PS +AA+  LS + EL  + +
Sbjct: 234 FRPSEVAAAVALSVSGELQRVHF 256

[Close]
BLAST of CmoCh20G005920 vs. TAIR10
Match: AT1G70210.1 (AT1G70210.1 CYCLIN D1;1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 1 

Query: 40  DAATLFLIESDHML-SPTYLHTLHSSPTDSSVRRDTISLISQCCCSCNIDPHLSYLAVNY 99
           D+   F+ +  H +    YL    +   D+S R D+++ I +     N  P  +YLAVNY
Sbjct: 50  DSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNY 109

Query: 100 LDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQ-TEHNLFDFQ-GNEGFIFDPQTVHRM 159
           +DRF   + +P+   W ++LLAV+C+SLAAKM++    +LFDFQ     ++F+ +T+ RM
Sbjct: 110 MDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRM 169

Query: 160 ESLILGALKWRMRSITPFSFVPFFISLFKLRDP--PLLQALKARATEIIFIAQNGIELLE 219
           E L+L  L WR+RS+TPF F+ FF   +K+ DP    L    + ATEII         LE
Sbjct: 170 ELLVLSVLDWRLRSVTPFDFISFF--AYKI-DPSGTFLGFFISHATEIILSNIKEASFLE 229

Query: 220 FKPSVIAASALLSAAHEL 233
           + PS IAA+A+L  A+EL
Sbjct: 230 YWPSSIAAAAILCVANEL 244

[Close]
BLAST of CmoCh20G005920 vs. TAIR10
Match: AT5G10440.1 (AT5G10440.1 cyclin d4;2)

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-29
Identity = 76/202 (37.62%), Postives = 111/202 (54.95%), Query Frame = 1 

Query: 36  PHSSDAATLFLIESDHMLSPT--YLHTLHSSPTDSSVRRDTISLISQCCCSCNIDPHLSY 95
           P  S+     +IE +   SP   YL  L +   D +VR   +  I + C      P    
Sbjct: 32  PLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCIC 91

Query: 96  LAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQ 155
           LA+NYLDRF S   +P  K W ++LLAV+C+SLAAK+++T    L   Q G   F+F+ +
Sbjct: 92  LAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAK 151

Query: 156 TVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIE 215
           +V RME L+L  L+WR+R++TP S+V +F+S     D      L  R+ ++I     GI+
Sbjct: 152 SVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGID 211

Query: 216 LLEFKPSVIAASALLSAAHELF 234
            LEF+ S IAA+  LS + E F
Sbjct: 212 FLEFRASEIAAAVALSVSGEHF 233

[Close]
BLAST of CmoCh20G005920 vs. TAIR10
Match: AT2G22490.2 (AT2G22490.2 Cyclin D2;1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24
Identity = 85/286 (29.72%), Postives = 146/286 (51.05%), Query Frame = 1 

Query: 57  YLHTLHSSPTDSSVRRDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVL 116
           Y+  L S   D SVR   +  I + C   +       L++NYLDRF +   +P+ K W  
Sbjct: 83  YVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAA 142

Query: 117 RLLAVSCVSLAAKMKQTE-HNLFDFQGNE-GFIFDPQTVHRMESLILGALKWRMRSITPF 176
           +LLAVSC+SLA+KM++T+  ++ D Q  +  F+F+ +T+ RME L++  L WR++++TPF
Sbjct: 143 QLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPF 202

Query: 177 SFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFP 236
           SF+ +F+         + + L  R++  I      IE L+F+PS IAA+A +S +     
Sbjct: 203 SFIDYFVDKI---SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVS---IS 262

Query: 237 IQYPCF--RKAILNCSYVNKEEEEEMLGRCFKAVQEIVINGYERGGLDIEQRSDTA---- 296
            +  C    KA+ +  YV   +++E + RC   ++ +      RG    ++++  A    
Sbjct: 263 GETECIDEEKALSSLIYV---KQQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAV 322

Query: 297 ----ANVLDHHFSSSESENTFMGT---SSSASAVTNRADKDGKKRK 328
                 VL+    S  SE   + +   SS +S   N  + +  KR+
Sbjct: 323 PASPVGVLEATCLSYRSEERTVESCTNSSQSSPDNNNNNNNSNKRR 359

[Close]
BLAST of CmoCh20G005920 vs. NCBI nr
Match: gi|659094751|ref|XP_008448224.1| (PREDICTED: putative cyclin-D6-1 isoform X1 [Cucumis melo])

HSP 1 Score: 497.7 bits (1280), Expect = 1.7e-137
Identity = 261/319 (81.82%), Postives = 279/319 (87.46%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDFDLENP THLH  HS DA+ LFL ESDHMLSP+YLHTL SSP+D +VR+DT+S ISQC
Sbjct: 1   MDFDLENPLTHLHQLHSDDAS-LFLTESDHMLSPSYLHTLLSSPSDFAVRQDTVSFISQC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           C + NIDPHLSYLAVNYLDRFFS QGVPQPKPWVLRLLAVSCVSLAAKMKQ EHNLFDFQ
Sbjct: 61  CSNSNIDPHLSYLAVNYLDRFFSSQGVPQPKPWVLRLLAVSCVSLAAKMKQIEHNLFDFQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           GNEGFIFDPQTVHRME LILGALKWRMRSITPFSF+PFFISLFKLRDPPLLQALK RATE
Sbjct: 121 GNEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFIPFFISLFKLRDPPLLQALKGRATE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEE-EEEMLG 261
           IIFIAQNGIELLEFK SVIAA+ALLSAAHELFPIQYPCFRKAI+NCSYV KEE EEE L 
Sbjct: 181 IIFIAQNGIELLEFKASVIAAAALLSAAHELFPIQYPCFRKAIINCSYVKKEENEEEKLV 240

Query: 262 RCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRAD 321
           RC KAV+EIVING+ERG  ++E+RS+TA NVLDHHFSSSESENT        SA+ NR D
Sbjct: 241 RCLKAVEEIVINGHERGMDEMEERSETAGNVLDHHFSSSESENT--------SAMKNRGD 300

Query: 322 KD-GKKRKVGVRQSKNERV 339
           KD GKKRKVG     N+RV
Sbjct: 301 KDGGKKRKVG--YCNNQRV 308

[Close]
BLAST of CmoCh20G005920 vs. NCBI nr
Match: gi|449444582|ref|XP_004140053.1| (PREDICTED: putative cyclin-D6-1 [Cucumis sativus])

HSP 1 Score: 485.0 bits (1247), Expect = 1.1e-133
Identity = 256/319 (80.25%), Postives = 274/319 (85.89%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDFDLENP THLH  HS DA+ LFL ESDHMLSP+YLHTL +SP+D +VRRDTI  ISQC
Sbjct: 1   MDFDLENPLTHLHQLHSDDAS-LFLTESDHMLSPSYLHTLLTSPSDFAVRRDTIYFISQC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           C + NIDPHLSYLAVNYLDRFFSFQG+PQPKPWVLRLLAVSCVSLAAKMKQ EHNL DFQ
Sbjct: 61  CSNSNIDPHLSYLAVNYLDRFFSFQGMPQPKPWVLRLLAVSCVSLAAKMKQIEHNLSDFQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+EGFIFDPQTVHRME LILGALKWRMRSITPFSF+PFF SLFKLRDPPLLQALK RATE
Sbjct: 121 GSEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFIPFFSSLFKLRDPPLLQALKGRATE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNK-EEEEEMLG 261
           IIFIAQNGIELLEFK SVIAA+ALLSAAHELFPIQYPCFRKAI+NCSYV K EEEEE L 
Sbjct: 181 IIFIAQNGIELLEFKASVIAAAALLSAAHELFPIQYPCFRKAIINCSYVKKEEEEEEKLV 240

Query: 262 RCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRAD 321
           RC KAV+EIVING+ER   ++E+RS+TA NVLDHHFSSSESENT        SA  NR D
Sbjct: 241 RCLKAVEEIVINGHERRMDEMEERSETAGNVLDHHFSSSESENT--------SATKNRGD 300

Query: 322 KD-GKKRKVGVRQSKNERV 339
           KD GK RKVG     N+RV
Sbjct: 301 KDEGKMRKVG--YCNNQRV 308

[Close]
BLAST of CmoCh20G005920 vs. NCBI nr
Match: gi|659094753|ref|XP_008448225.1| (PREDICTED: putative cyclin-D6-1 isoform X2 [Cucumis melo])

HSP 1 Score: 413.3 bits (1061), Expect = 4.1e-112
Identity = 204/231 (88.31%), Postives = 214/231 (92.64%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDFDLENP THLH  HS DA+ LFL ESDHMLSP+YLHTL SSP+D +VR+DT+S ISQC
Sbjct: 1   MDFDLENPLTHLHQLHSDDAS-LFLTESDHMLSPSYLHTLLSSPSDFAVRQDTVSFISQC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           C + NIDPHLSYLAVNYLDRFFS QGVPQPKPWVLRLLAVSCVSLAAKMKQ EHNLFDFQ
Sbjct: 61  CSNSNIDPHLSYLAVNYLDRFFSSQGVPQPKPWVLRLLAVSCVSLAAKMKQIEHNLFDFQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           GNEGFIFDPQTVHRME LILGALKWRMRSITPFSF+PFFISLFKLRDPPLLQALK RATE
Sbjct: 121 GNEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFIPFFISLFKLRDPPLLQALKGRATE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNK 253
           IIFIAQNGIELLEFK SVIAA+ALLSAAHELFPIQYPCFRKAI+NCSYV K
Sbjct: 181 IIFIAQNGIELLEFKASVIAAAALLSAAHELFPIQYPCFRKAIINCSYVKK 230

[Close]
BLAST of CmoCh20G005920 vs. NCBI nr
Match: gi|700191475|gb|KGN46679.1| (hypothetical protein Csa_6G121960 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 5.0e-110
Identity = 201/231 (87.01%), Postives = 212/231 (91.77%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDFDLENP THLH  HS DA+ LFL ESDHMLSP+YLHTL +SP+D +VRRDTI  ISQC
Sbjct: 1   MDFDLENPLTHLHQLHSDDAS-LFLTESDHMLSPSYLHTLLTSPSDFAVRRDTIYFISQC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           C + NIDPHLSYLAVNYLDRFFSFQG+PQPKPWVLRLLAVSCVSLAAKMKQ EHNL DFQ
Sbjct: 61  CSNSNIDPHLSYLAVNYLDRFFSFQGMPQPKPWVLRLLAVSCVSLAAKMKQIEHNLSDFQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+EGFIFDPQTVHRME LILGALKWRMRSITPFSF+PFF SLFKLRDPPLLQALK RATE
Sbjct: 121 GSEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFIPFFSSLFKLRDPPLLQALKGRATE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNK 253
           IIFIAQNGIELLEFK SVIAA+ALLSAAHELFPIQYPCFRKAI+NCSYV K
Sbjct: 181 IIFIAQNGIELLEFKASVIAAAALLSAAHELFPIQYPCFRKAIINCSYVKK 230

[Close]
BLAST of CmoCh20G005920 vs. NCBI nr
Match: gi|566244521|ref|XP_002326106.2| (hypothetical protein POPTR_0019s14110g [Populus trichocarpa])

HSP 1 Score: 347.1 bits (889), Expect = 3.6e-92
Identity = 189/309 (61.17%), Postives = 223/309 (72.17%), Query Frame = 1 

Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPTDSSVRRDTISLISQC 81
           MDF+LENP T+ H  H     +LFLIESDHM S  YL TL     D S RR+ IS + + 
Sbjct: 1   MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVLRV 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
             SCN DP LSYLAVNYLDRF S QG+PQPKPWV +LLAV+CVSLAAKMK+ E  + D Q
Sbjct: 61  --SCNFDPSLSYLAVNYLDRFLSSQGIPQPKPWVFKLLAVACVSLAAKMKEAEFYVTDIQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           G+ GF+FDPQT+ +ME LILGAL WRMRSITPFSF+ FFISLFK +DPPL QALKARA E
Sbjct: 121 GDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLRQALKARACE 180

Query: 202 IIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCFRKAILNCSYVNKEEEEEMLGR 261
           IIF AQN I LLEF+PS+ AASALL A HELFP+Q+ CFRKAI  CSYVNKE     L +
Sbjct: 181 IIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISICSYVNKEN----LLQ 240

Query: 262 CFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSESENTFMGTSSSASAVTNRA-- 321
           C+ A+QE  ++GY +   D+   SDT  NVLD HFSSSESENT       +S  +N+   
Sbjct: 241 CYNAMQETAMDGY-KSQFDMVSSSDTPVNVLDRHFSSSESENTNGTVVMISSNGSNKTWP 300

Query: 322 DKDGKKRKV 329
           +K  K+RK+
Sbjct: 301 EKGIKRRKI 302

The following BLAST results are available for this feature:
BLAST of CmoCh20G005920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCD61_ARATH1.2e-6346.75Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1[more]
CCD61_ORYSJ4.4e-3737.26Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1[more]
CCD41_ARATH2.1e-3140.41Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2[more]
CCD41_ORYSJ5.7e-2936.13Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2[more]
CCD11_ARATH2.8e-2839.39Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3[more]
BLAST of CmoCh20G005920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCV5_CUCSA3.5e-11087.01Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121960 PE=3 SV=1[more]
B9INU6_POPTR2.5e-9261.17Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14110g PE=3 SV=1[more]
G9BZV3_POPCA2.5e-9261.17D6-type cyclin OS=Populus canadensis GN=CYCD6;4 PE=2 SV=1[more]
A8Y921_POPTR2.5e-9261.17D6-type cyclin OS=Populus trichocarpa GN=CYCD6;4 PE=2 SV=1[more]
M5WUJ1_PRUPE6.9e-9058.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008931mg PE=3 SV=1[more]
BLAST of CmoCh20G005920 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03270.16.8e-6546.75 Cyclin D6;1[more]
AT5G65420.36.5e-3138.92 CYCLIN D4;1[more]
AT1G70210.11.6e-2939.39 CYCLIN D1;1[more]
AT5G10440.14.6e-2937.62 cyclin d4;2[more]
AT2G22490.21.2e-2429.72 Cyclin D2;1[more]
BLAST of CmoCh20G005920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094751|ref|XP_008448224.1|1.7e-13781.82PREDICTED: putative cyclin-D6-1 isoform X1 [Cucumis melo][more]
gi|449444582|ref|XP_004140053.1|1.1e-13380.25PREDICTED: putative cyclin-D6-1 [Cucumis sativus][more]
gi|659094753|ref|XP_008448225.1|4.1e-11288.31PREDICTED: putative cyclin-D6-1 isoform X2 [Cucumis melo][more]
gi|700191475|gb|KGN46679.1|5.0e-11087.01hypothetical protein Csa_6G121960 [Cucumis sativus][more]
gi|566244521|ref|XP_002326106.2|3.6e-9261.17hypothetical protein POPTR_0019s14110g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
IPR013763Cyclin-like
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0051726regulation of cell cycle
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051726 regulation of cell cycle
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G005920.1CmoCh20G005920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 171..270
score: 1.
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 171..303
score: 1.
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 54..168
score: 2.1
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 63..162
score: 3.6E-21coord: 163..232
score: 5.
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 76..162
score: 1.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 42..168
score: 2.75E-24coord: 152..249
score: 4.7
NoneNo IPR availablePANTHERPTHR10177CYCLINEcoord: 22..341
score: 9.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G005920Cucsa.119650Cucumber (Gy14) v1cgycmoB0298
CmoCh20G005920CmaCh20G006550Cucurbita maxima (Rimu)cmacmoB552
CmoCh20G005920CmaCh02G001340Cucurbita maxima (Rimu)cmacmoB608
CmoCh20G005920Csa6G121960Cucumber (Chinese Long) v2cmocuB556
CmoCh20G005920MELO3C013544Melon (DHL92) v3.5.1cmomeB490
CmoCh20G005920ClCG02G011490Watermelon (Charleston Gray)cmowcgB498
CmoCh20G005920CSPI06G09880Wild cucumber (PI 183967)cmocpiB561
CmoCh20G005920Cp4.1LG05g14780Cucurbita pepo (Zucchini)cmocpeB536
CmoCh20G005920Cp4.1LG16g04760Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G005920Cla97C02G037180Watermelon (97103) v2cmowmbB565
CmoCh20G005920Bhi10G000912Wax gourdcmowgoB0681
CmoCh20G005920Carg13557Silver-seed gourdcarcmoB0043
CmoCh20G005920Carg03160Silver-seed gourdcarcmoB0464
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G005920CmoCh02G001350Cucurbita moschata (Rifu)cmocmoB406
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G005920Watermelon (97103) v2cmowmbB552
CmoCh20G005920Cucurbita moschata (Rifu)cmocmoB381
CmoCh20G005920Cucumber (Gy14) v1cgycmoB0408
CmoCh20G005920Cucurbita maxima (Rimu)cmacmoB517
CmoCh20G005920Wild cucumber (PI 183967)cmocpiB568
CmoCh20G005920Melon (DHL92) v3.5.1cmomeB504
CmoCh20G005920Watermelon (Charleston Gray)cmowcgB484
CmoCh20G005920Watermelon (97103) v1cmowmB526
CmoCh20G005920Cucurbita pepo (Zucchini)cmocpeB515
CmoCh20G005920Cucurbita pepo (Zucchini)cmocpeB525
CmoCh20G005920Bottle gourd (USVL1VR-Ls)cmolsiB494
CmoCh20G005920Cucumber (Gy14) v2cgybcmoB781
CmoCh20G005920Melon (DHL92) v3.6.1cmomedB566
CmoCh20G005920Melon (DHL92) v3.6.1cmomedB577
CmoCh20G005920Silver-seed gourdcarcmoB1184
CmoCh20G005920Cucumber (Chinese Long) v3cmocucB0665
CmoCh20G005920Cucumber (Chinese Long) v3cmocucB0672