CmoCh19G009680 (gene) Cucurbita moschata (Rifu)

NameCmoCh19G009680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBHLH transcription factor
LocationCmo_Chr19 : 8754880 .. 8755839 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTTCTGCTGGCGACGATGCTTCCTCCACTGTTTGGGATGATGCTTGCTTCGACGCCATGTTTTCTGGCGTCAGTCTCCAGTCGTTTCTCGCGGGTGGTAGCCAGAGCCACACATTGTTGCCGTCTCTGTTCGGAGGATGCTACGTTGCCGATTCTCTTACTTTTCCTGACGGTATGACGTCGTTGTATCCTCAGGTAAGCTCTAACTTCGTCGCTGAAAGTACCGCCTCTTCCGATGGTCCCTTCTTCAAGTTGCCTAAATCCGAGCCGATGAGTGTGTATGAACAAACGGAGACTCAAGAATCCACGTTCCTTTTTCATGATTCGACGTCGTTTCCTCACTTGCCCGATCTCCGTTCCTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGATGAATCCGTTGCAGATGGTGGAGCCGATGGTGCGAACATGTGAGGGGTTCCAGAACTTTTTTGTGCCGTACGAGTACAAACACTCGCCGGATTTAACCACTTCTGCTGCCGTGTCTCCTGCTGTTCAAATCCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCATGGGACAAAAAAATGGACATCGCTACAATGCTTGAAGAAGCGTGCAAGTACGTCAAGTTCCTTCAGGCACAACTCCTCGCGCTTCAATCCATGCCCCGTGAATCGGCCATTTCTAGTTATTCAAATAATCATTACATCACCGGTATGTTTGGTGGATTGGAGAGGCTGAATCGAAACCAACTATTGCAAGTTTTAGTTAACTCGCCGGTGGCTCAGACCATGCTTTGTTCTCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTGGGCCTTATCCAGAAGATCGCGGAGAAACGAGTTCTGCTGCAGCAAATGTCGACATTCCGTCCCAAGCCCTAG

mRNA sequence

ATGGAGACTTCTGCTGGCGACGATGCTTCCTCCACTGTTTGGGATGATGCTTGCTTCGACGCCATGTTTTCTGGCGTCAGTCTCCAGTCGTTTCTCGCGGGTGGTAGCCAGAGCCACACATTGTTGCCGTCTCTGTTCGGAGGATGCTACGTTGCCGATTCTCTTACTTTTCCTGACGGTATGACGTCGTTGTATCCTCAGGTAAGCTCTAACTTCGTCGCTGAAAGTACCGCCTCTTCCGATGGTCCCTTCTTCAAGTTGCCTAAATCCGAGCCGATGAGTGTGTATGAACAAACGGAGACTCAAGAATCCACGTTCCTTTTTCATGATTCGACGTCGTTTCCTCACTTGCCCGATCTCCGTTCCTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGATGAATCCGTTGCAGATGGTGGAGCCGATGGTGCGAACATGTGAGGGGTTCCAGAACTTTTTTGTGCCGTACGAGTACAAACACTCGCCGGATTTAACCACTTCTGCTGCCGTGTCTCCTGCTGTTCAAATCCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCATGGGACAAAAAAATGGACATCGCTACAATGCTTGAAGAAGCGTGCAAGTACGTCAAGTTCCTTCAGGCACAACTCCTCGCGCTTCAATCCATGCCCCGTGAATCGGCCATTTCTAGTTATTCAAATAATCATTACATCACCGGTATGTTTGGTGGATTGGAGAGGCTGAATCGAAACCAACTATTGCAAGTTTTAGTTAACTCGCCGGTGGCTCAGACCATGCTTTGTTCTCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTGGGCCTTATCCAGAAGATCGCGGAGAAACGAGTTCTGCTGCAGCAAATGTCGACATTCCGTCCCAAGCCCTAG

Coding sequence (CDS)

ATGGAGACTTCTGCTGGCGACGATGCTTCCTCCACTGTTTGGGATGATGCTTGCTTCGACGCCATGTTTTCTGGCGTCAGTCTCCAGTCGTTTCTCGCGGGTGGTAGCCAGAGCCACACATTGTTGCCGTCTCTGTTCGGAGGATGCTACGTTGCCGATTCTCTTACTTTTCCTGACGGTATGACGTCGTTGTATCCTCAGGTAAGCTCTAACTTCGTCGCTGAAAGTACCGCCTCTTCCGATGGTCCCTTCTTCAAGTTGCCTAAATCCGAGCCGATGAGTGTGTATGAACAAACGGAGACTCAAGAATCCACGTTCCTTTTTCATGATTCGACGTCGTTTCCTCACTTGCCCGATCTCCGTTCCTTGGAGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGATGAATCCGTTGCAGATGGTGGAGCCGATGGTGCGAACATGTGAGGGGTTCCAGAACTTTTTTGTGCCGTACGAGTACAAACACTCGCCGGATTTAACCACTTCTGCTGCCGTGTCTCCTGCTGTTCAAATCCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAACTACTGCCATGGGACAAAAAAATGGACATCGCTACAATGCTTGAAGAAGCGTGCAAGTACGTCAAGTTCCTTCAGGCACAACTCCTCGCGCTTCAATCCATGCCCCGTGAATCGGCCATTTCTAGTTATTCAAATAATCATTACATCACCGGTATGTTTGGTGGATTGGAGAGGCTGAATCGAAACCAACTATTGCAAGTTTTAGTTAACTCGCCGGTGGCTCAGACCATGCTTTGTTCTCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTGGGCCTTATCCAGAAGATCGCGGAGAAACGAGTTCTGCTGCAGCAAATGTCGACATTCCGTCCCAAGCCCTAG
BLAST of CmoCh19G009680 vs. Swiss-Prot
Match: BH117_ARATH (Transcription factor bHLH117 OS=Arabidopsis thaliana GN=BHLH117 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-20
Identity = 72/207 (34.78%), Postives = 108/207 (52.17%), Query Frame = 1

Query: 96  YEQTETQESTFLFHD------STSFPHLPDLRSLEQCSSSFNKRARVDSVMNPLQMVEPM 155
           Y+ T TQ    LFH+      +T F HLPDL+S++        +    S+  PL      
Sbjct: 63  YDSTHTQ----LFHNDDTTTTTTPFLHLPDLKSIDAVEEPTTMKL-FPSLSPPL------ 122

Query: 156 VRTCEGFQNFFVPYEYKHSPDLTTSAAVSPAVQIPRSALARQRRQKLSDKTRCLQKLLPW 215
                       P   +   + T+S+  S +           +R+K+SDK R L+KL+PW
Sbjct: 123 ------------PAAKRQKLNSTSSSTTSGSPTASNDGGIITKRRKISDKIRSLEKLMPW 182

Query: 216 DKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNHYITGMFGGLERLNRNQL 275
           ++KM++A  LEE+ KY+KFLQ+Q+ +L+ MP ES  ++        G    L+ L R Q+
Sbjct: 183 ERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGE----VGETDLLKSLTRQQI 242

Query: 276 LQVLVNSPVAQTMLCSQSCCVFSAEQL 297
           LQVL NSP ++ +L S+  CVFS EQL
Sbjct: 243 LQVLANSPGSRNVLSSRGVCVFSYEQL 242

BLAST of CmoCh19G009680 vs. Swiss-Prot
Match: BH087_ARATH (Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-08
Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240
           P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Sbjct: 279 PQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

BLAST of CmoCh19G009680 vs. Swiss-Prot
Match: BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.7e-07
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YVKFLQ Q+  L S
Sbjct: 247 PQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 301

BLAST of CmoCh19G009680 vs. Swiss-Prot
Match: BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.5e-07
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 276 PQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 330

BLAST of CmoCh19G009680 vs. Swiss-Prot
Match: BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.5e-07
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 177 PQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231

BLAST of CmoCh19G009680 vs. TrEMBL
Match: A0A0A0K6W7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044910 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.5e-134
Identity = 259/322 (80.43%), Postives = 276/322 (85.71%), Query Frame = 1

Query: 1   METSAGDDASSTVWDD-ACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPD 60
           METS GDDASS+VWDD ACF+AMFS VS QSFLA G+ S       FGG Y+AD+LTFP+
Sbjct: 1   METSPGDDASSSVWDDDACFNAMFSDVSFQSFLAAGNHSQ------FGGGYIADALTFPN 60

Query: 61  GMTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPD 120
             TS YPQ ++NF AE T SSDGPFFKLPKSEPM VYE TET+E  F+ HDSTSFPHLPD
Sbjct: 61  PTTSFYPQPTTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDL-TTSAAVS 180
           LRSLEQCSSS NKRARVDS+ NPLQM+EPMVR CEGFQ+FFVPY+YK S DL T SA  S
Sbjct: 121 LRSLEQCSSSLNKRARVDSMSNPLQMMEPMVRGCEGFQSFFVPYQYKISSDLITASATAS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
Sbjct: 181 PTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240

Query: 241 MPRESAISSY-SNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300
           MP ESAISSY S+N+YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG
Sbjct: 241 MPCESAISSYNSSNNYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 LIQKIAEKRVLLQQMSTFRPKP 320
           LIQKIAEKRVL     TF PKP
Sbjct: 301 LIQKIAEKRVL----PTFHPKP 312

BLAST of CmoCh19G009680 vs. TrEMBL
Match: W9SRS0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018295 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.8e-42
Identity = 141/331 (42.60%), Postives = 171/331 (51.66%), Query Frame = 1

Query: 4   SAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDGMTS 63
           SAG+ +S    D + F++MFS VSL S L        LL SL     ++D  +     T+
Sbjct: 20  SAGECSSD---DISTFNSMFSNVSLLSLLTSTPNQDALLSSL---PLLSDFTSLSSSSTT 79

Query: 64  LYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTE---------------TQESTFLF 123
           + P     F   +           PK EP+   + T+               T    F+F
Sbjct: 80  IPPPPGFVFFPNAIT---------PKPEPLPFTDFTDETNHLPRPPQPPVTPTPPFNFMF 139

Query: 124 HDSTS--FPHLPDLRSLEQCSSSFN------------KRARVDSVMNPLQMVEPMVRTCE 183
            D+ S  F HLPDL SL+  S S              KR R DS         P      
Sbjct: 140 ADTESPAFHHLPDLLSLDHFSPSAAGEEYSPPSSSSLKRLRADSTSTSHHQASP------ 199

Query: 184 GFQNFFVPYEYKHSPDLTTSAAVSPAVQIPR-SALARQRRQKLSDKTRCLQKLLPWDKKM 243
                                   P   +PR SALARQRRQKLSDKTRCLQKLLPWDKKM
Sbjct: 200 --------------------PPPPPPPMVPRGSALARQRRQKLSDKTRCLQKLLPWDKKM 259

Query: 244 DIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNHYITGMFGGLERLNRNQLLQVL 303
           D+ATMLEEA KYVKFLQAQL ALQSMP   A++S S++  +   FGGL RLN NQLLQVL
Sbjct: 260 DMATMLEEAYKYVKFLQAQLAALQSMP---AVASSSSSAGVES-FGGLGRLNGNQLLQVL 305

Query: 304 VNSPVAQTMLCSQSCCVFSAEQLGLIQKIAE 305
           VNSPVAQT L S+ CCVFS EQLGL++++A+
Sbjct: 320 VNSPVAQTTLYSKGCCVFSVEQLGLLERLAD 305

BLAST of CmoCh19G009680 vs. TrEMBL
Match: A0A061E4F6_THECC (DNA binding-like protein OS=Theobroma cacao GN=TCM_007802 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 113/247 (45.75%), Postives = 144/247 (58.30%), Query Frame = 1

Query: 86  KLPKSEPMSVYEQTETQESTFLFHDSTSF-----PHLPDLRSLEQ-----------CSSS 145
           +LP  +  S+Y  +   +   +  DST F       LPDL SLEQ            SSS
Sbjct: 117 QLPVPDLDSLYSSSLPTKIPDILPDSTQFLDFFNKPLPDLHSLEQPHRQPHFTEPSVSSS 176

Query: 146 FNK--RARVD---SVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSPAVQIP 205
             K  R R+D   S  NP Q ++ +V++                         SP+  IP
Sbjct: 177 TRKLKRTRLDLNLSDNNP-QTLDSIVQSFN-----------------------SPSPVIP 236

Query: 206 RSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPRESA 265
            S LAR+RRQKLSDKTRCLQKL+PWDKKMD  TML+EA KY++FL+AQ+  LQSMP  S+
Sbjct: 237 HSELARKRRQKLSDKTRCLQKLMPWDKKMDTGTMLQEAYKYIRFLEAQVSILQSMPISSS 296

Query: 266 ISSYSNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAE 312
            +S  +N  +   +GGL RLNR QLLQVLVNSPVAQTML SQ  CVF+ EQL  ++K  E
Sbjct: 297 FASTEHNAPVGFDYGGLGRLNRQQLLQVLVNSPVAQTMLYSQGFCVFAYEQLVSLKKAKE 339

BLAST of CmoCh19G009680 vs. TrEMBL
Match: A0A0D2RQD6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G208700 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-36
Identity = 87/141 (61.70%), Postives = 105/141 (74.47%), Query Frame = 1

Query: 174 SAAVSPAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQL 233
           +A   P   IP S LAR+RRQK SDKTRCLQKL+PWDKKMD+ATML+EA KY++FLQAQ+
Sbjct: 159 NAPPPPPPIIPHSELARKRRQKRSDKTRCLQKLMPWDKKMDMATMLQEAYKYIRFLQAQV 218

Query: 234 LALQSMPRES---AISSYSNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCV 293
             LQSMP  S   +I+ + NN      F GLERLNR QLLQVL+NSP+AQTMLCSQ  CV
Sbjct: 219 SILQSMPITSSFVSITQHLNNASFEVDFAGLERLNRQQLLQVLINSPMAQTMLCSQGLCV 278

Query: 294 FSAEQLGLIQKIAEKRVLLQQ 312
           F+ EQL  + K  E++ +LQQ
Sbjct: 279 FATEQLVSLNKAKERKTMLQQ 299

BLAST of CmoCh19G009680 vs. TrEMBL
Match: A0A0S3SH92_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G088300 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-35
Identity = 93/179 (51.96%), Postives = 118/179 (65.92%), Query Frame = 1

Query: 136 VDSVMNPLQMVEPMVRTCEGFQNF--FVPYEYKHSPDLTTSAAVSPAVQ------IPRSA 195
           +     P +++ P     + F+ F  + P  +   P L +     P  Q      IP+S 
Sbjct: 46  IPQTAEPPKILVPKTEPSQPFKFFPQYHPTPFLRLPQLRSPEQPQPKRQRLESPVIPQSN 105

Query: 196 LARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISS 255
           LARQRRQKLS+KTRCLQKL+PWDKKMD  T+LEEA KYV+FLQAQ   LQSMP  S+ SS
Sbjct: 106 LARQRRQKLSEKTRCLQKLMPWDKKMDQGTLLEEAYKYVRFLQAQFRVLQSMPSHSSSSS 165

Query: 256 YSNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKR 307
            S     + +F  LE+LNR+QLLQVLVNSPVAQTML SQ  CVFS EQL L++K++++R
Sbjct: 166 PSFRQN-SAVFVDLEKLNRSQLLQVLVNSPVAQTMLYSQGFCVFSLEQLSLLRKLSDRR 223

BLAST of CmoCh19G009680 vs. TAIR10
Match: AT3G22100.1 (AT3G22100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-21
Identity = 72/207 (34.78%), Postives = 108/207 (52.17%), Query Frame = 1

Query: 96  YEQTETQESTFLFHD------STSFPHLPDLRSLEQCSSSFNKRARVDSVMNPLQMVEPM 155
           Y+ T TQ    LFH+      +T F HLPDL+S++        +    S+  PL      
Sbjct: 63  YDSTHTQ----LFHNDDTTTTTTPFLHLPDLKSIDAVEEPTTMKL-FPSLSPPL------ 122

Query: 156 VRTCEGFQNFFVPYEYKHSPDLTTSAAVSPAVQIPRSALARQRRQKLSDKTRCLQKLLPW 215
                       P   +   + T+S+  S +           +R+K+SDK R L+KL+PW
Sbjct: 123 ------------PAAKRQKLNSTSSSTTSGSPTASNDGGIITKRRKISDKIRSLEKLMPW 182

Query: 216 DKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNHYITGMFGGLERLNRNQL 275
           ++KM++A  LEE+ KY+KFLQ+Q+ +L+ MP ES  ++        G    L+ L R Q+
Sbjct: 183 ERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGE----VGETDLLKSLTRQQI 242

Query: 276 LQVLVNSPVAQTMLCSQSCCVFSAEQL 297
           LQVL NSP ++ +L S+  CVFS EQL
Sbjct: 243 LQVLANSPGSRNVLSSRGVCVFSYEQL 242

BLAST of CmoCh19G009680 vs. TAIR10
Match: AT3G21330.1 (AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 3.8e-09
Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240
           P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Sbjct: 279 PQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

BLAST of CmoCh19G009680 vs. TAIR10
Match: AT4G33880.1 (AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 2)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 276 PQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 330

BLAST of CmoCh19G009680 vs. TAIR10
Match: AT1G27740.1 (AT1G27740.1 root hair defective 6-like 4)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  L S
Sbjct: 177 PQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 231

BLAST of CmoCh19G009680 vs. TAIR10
Match: AT5G09750.1 (AT5G09750.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 7.2e-08
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 1

Query: 184 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 239
           P+S  AR RR+++S++ R LQ+L+P   KMD A+ML+EA +YVKFL+ Q+  L +
Sbjct: 129 PQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183

BLAST of CmoCh19G009680 vs. NCBI nr
Match: gi|659110756|ref|XP_008455394.1| (PREDICTED: transcription factor bHLH117 [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 1.9e-135
Identity = 262/322 (81.37%), Postives = 276/322 (85.71%), Query Frame = 1

Query: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDG 60
           ME+S GDDASS+VWDDACF+AMFS VS QSFLA G+ S       FGG Y+AD+LTFPD 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ------FGGGYIADALTFPDA 60

Query: 61  MTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPDL 120
            TS YPQ S+NF AE T SSDGPFFKLPKSEPM VYE TET+E  F+ HDSTSFPHLPDL
Sbjct: 61  TTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPDL 120

Query: 121 RSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPY-EYKHSPDL-TTSAAVS 180
           RSLEQ SSSFNKRARVDS+ NPLQMVEPMVR CEGFQNFFVPY +YK S DL TTSA  S
Sbjct: 121 RSLEQRSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATAS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
Sbjct: 181 PTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240

Query: 241 MPRESAISSY-SNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300
           MP ESA+SSY S+N YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG
Sbjct: 241 MPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 LIQKIAEKRVLLQQMSTFRPKP 320
           LIQKIAEKRVL     TF PKP
Sbjct: 301 LIQKIAEKRVL----PTFHPKP 312

BLAST of CmoCh19G009680 vs. NCBI nr
Match: gi|778723880|ref|XP_011658716.1| (PREDICTED: transcription factor bHLH117 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 2.1e-134
Identity = 259/322 (80.43%), Postives = 276/322 (85.71%), Query Frame = 1

Query: 1   METSAGDDASSTVWDD-ACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPD 60
           METS GDDASS+VWDD ACF+AMFS VS QSFLA G+ S       FGG Y+AD+LTFP+
Sbjct: 1   METSPGDDASSSVWDDDACFNAMFSDVSFQSFLAAGNHSQ------FGGGYIADALTFPN 60

Query: 61  GMTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPD 120
             TS YPQ ++NF AE T SSDGPFFKLPKSEPM VYE TET+E  F+ HDSTSFPHLPD
Sbjct: 61  PTTSFYPQPTTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDL-TTSAAVS 180
           LRSLEQCSSS NKRARVDS+ NPLQM+EPMVR CEGFQ+FFVPY+YK S DL T SA  S
Sbjct: 121 LRSLEQCSSSLNKRARVDSMSNPLQMMEPMVRGCEGFQSFFVPYQYKISSDLITASATAS 180

Query: 181 PAVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
           P VQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS
Sbjct: 181 PTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240

Query: 241 MPRESAISSY-SNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300
           MP ESAISSY S+N+YITG+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG
Sbjct: 241 MPCESAISSYNSSNNYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 LIQKIAEKRVLLQQMSTFRPKP 320
           LIQKIAEKRVL     TF PKP
Sbjct: 301 LIQKIAEKRVL----PTFHPKP 312

BLAST of CmoCh19G009680 vs. NCBI nr
Match: gi|731409839|ref|XP_010657339.1| (PREDICTED: transcription factor bHLH117 [Vitis vinifera])

HSP 1 Score: 216.1 bits (549), Expect = 9.0e-53
Identity = 143/313 (45.69%), Postives = 188/313 (60.06%), Query Frame = 1

Query: 15  DDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDGMTSLYPQVSSNFVA 74
           DD CF+AMFSGVSLQ+F++   +         G      + TFP    + +   S +F A
Sbjct: 28  DDFCFNAMFSGVSLQTFVSLNQEKS------LGSLPDYGTSTFPVTDATGFGFSSEDFTA 87

Query: 75  --ESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDS----------TSFPHLPDLRS 134
             +          K+PK E +   E+T+     F F  +          +SF HLP+LRS
Sbjct: 88  LHQKQVGECSKQLKMPKKELVENEEKTDKSSEPFTFTSNASDTFPILCDSSFQHLPELRS 147

Query: 135 LEQCSS---SFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSP 194
           +EQ S+   S +KR R  S  +   + + +V++ +    F  PY +   P         P
Sbjct: 148 VEQFSTHAESSHKRVRSYSPTDSYTL-DAIVKSFKLSNCFSAPYRWPDPP---------P 207

Query: 195 AVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 254
              +P+S+LARQRRQK+SDKTRCLQKL+PWDKKMD+ATMLEEA KY+KFLQAQ+ ALQSM
Sbjct: 208 PPVVPQSSLARQRRQKISDKTRCLQKLMPWDKKMDMATMLEEAYKYIKFLQAQIRALQSM 267

Query: 255 PRESAISSYSNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLI 313
           P +S    +   +  TG FGGL RLNR QLLQVLVNSPVAQTML S+ CCVFS EQL L+
Sbjct: 268 PCDSNFVPHDPIN-DTGPFGGLTRLNRQQLLQVLVNSPVAQTMLYSRGCCVFSLEQLILL 323

BLAST of CmoCh19G009680 vs. NCBI nr
Match: gi|1009131047|ref|XP_015882629.1| (PREDICTED: transcription factor bHLH117 [Ziziphus jujuba])

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 150/341 (43.99%), Postives = 185/341 (54.25%), Query Frame = 1

Query: 4   SAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDGMTS 63
           +AG D S    D +  DAMFSG+SL S+L   S      P +    Y+  +   P     
Sbjct: 21  TAGGDTSMD--DPSSMDAMFSGISLLSWLTTSSN-----PDI--DFYLPIN---PHPNNI 80

Query: 64  LYPQVSSNFVAESTASSDGPFF------------KLPKSEPMSVYEQTETQEST------ 123
             P  SS+F+  S + S    F            KLPK EP       ++   T      
Sbjct: 81  PIPLYSSSFIPYSVSPSSSSTFGFFPDLVASQTLKLPKLEPSLSLSLDDSPTPTTPAVFS 140

Query: 124 -----FLFHDSTSFPHLPDLRSLEQCSSS----------FNKRARVDSVMNPLQMVEPMV 183
                F+  DS  F HLPDL SL+  + S          F+KR R+DS     +    + 
Sbjct: 141 EPPLNFMPTDSLLFHHLPDLLSLDPLTDSSPPPPSLLSPFHKRRRLDSATTRHEN-HSLT 200

Query: 184 RTCEGFQNFFVPYEYKHSPDL----TTSAAVSPAVQIPRS-ALARQRRQKLSDKTRCLQK 243
                  N+  P+    SP+L    T S+  SP V IPRS ALARQRRQKLSDKTR LQK
Sbjct: 201 LNSFPLPNYATPFT--PSPELDDEATASSFSSPPVMIPRSSALARQRRQKLSDKTRYLQK 260

Query: 244 LLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNHYITGMFGGLERLN 303
           LLPWDKKM+IATMLEEA KYVKFLQAQL AL SMP  S+I        +  +FG L RLN
Sbjct: 261 LLPWDKKMNIATMLEEAYKYVKFLQAQLTALHSMPSHSSIPIPVRGGDLGSVFGILGRLN 320

Query: 304 RNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKR 307
           RNQLLQVLVNSPVAQ++LCSQ CCVFS EQL +++K  +++
Sbjct: 321 RNQLLQVLVNSPVAQSLLCSQGCCVFSVEQLDILKKTHKQK 346

BLAST of CmoCh19G009680 vs. NCBI nr
Match: gi|703149269|ref|XP_010109560.1| (hypothetical protein L484_018295 [Morus notabilis])

HSP 1 Score: 180.3 bits (456), Expect = 5.5e-42
Identity = 141/331 (42.60%), Postives = 171/331 (51.66%), Query Frame = 1

Query: 4   SAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQSHTLLPSLFGGCYVADSLTFPDGMTS 63
           SAG+ +S    D + F++MFS VSL S L        LL SL     ++D  +     T+
Sbjct: 20  SAGECSSD---DISTFNSMFSNVSLLSLLTSTPNQDALLSSL---PLLSDFTSLSSSSTT 79

Query: 64  LYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTE---------------TQESTFLF 123
           + P     F   +           PK EP+   + T+               T    F+F
Sbjct: 80  IPPPPGFVFFPNAIT---------PKPEPLPFTDFTDETNHLPRPPQPPVTPTPPFNFMF 139

Query: 124 HDSTS--FPHLPDLRSLEQCSSSFN------------KRARVDSVMNPLQMVEPMVRTCE 183
            D+ S  F HLPDL SL+  S S              KR R DS         P      
Sbjct: 140 ADTESPAFHHLPDLLSLDHFSPSAAGEEYSPPSSSSLKRLRADSTSTSHHQASP------ 199

Query: 184 GFQNFFVPYEYKHSPDLTTSAAVSPAVQIPR-SALARQRRQKLSDKTRCLQKLLPWDKKM 243
                                   P   +PR SALARQRRQKLSDKTRCLQKLLPWDKKM
Sbjct: 200 --------------------PPPPPPPMVPRGSALARQRRQKLSDKTRCLQKLLPWDKKM 259

Query: 244 DIATMLEEACKYVKFLQAQLLALQSMPRESAISSYSNNHYITGMFGGLERLNRNQLLQVL 303
           D+ATMLEEA KYVKFLQAQL ALQSMP   A++S S++  +   FGGL RLN NQLLQVL
Sbjct: 260 DMATMLEEAYKYVKFLQAQLAALQSMP---AVASSSSSAGVES-FGGLGRLNGNQLLQVL 305

Query: 304 VNSPVAQTMLCSQSCCVFSAEQLGLIQKIAE 305
           VNSPVAQT L S+ CCVFS EQLGL++++A+
Sbjct: 320 VNSPVAQTTLYSKGCCVFSVEQLGLLERLAD 305

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH117_ARATH4.5e-2034.78Transcription factor bHLH117 OS=Arabidopsis thaliana GN=BHLH117 PE=2 SV=2[more]
BH087_ARATH6.8e-0851.79Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2 SV=1[more]
BH084_ARATH5.7e-0752.73Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1[more]
BH085_ARATH7.5e-0752.73Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1[more]
BH054_ARATH7.5e-0752.73Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K6W7_CUCSA1.5e-13480.43Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044910 PE=4 SV=1[more]
W9SRS0_9ROSA3.8e-4242.60Uncharacterized protein OS=Morus notabilis GN=L484_018295 PE=4 SV=1[more]
A0A061E4F6_THECC1.8e-3645.75DNA binding-like protein OS=Theobroma cacao GN=TCM_007802 PE=4 SV=1[more]
A0A0D2RQD6_GOSRA5.3e-3661.70Uncharacterized protein OS=Gossypium raimondii GN=B456_005G208700 PE=4 SV=1[more]
A0A0S3SH92_PHAAN4.5e-3551.96Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G088300 PE=... [more]
Match NameE-valueIdentityDescription
AT3G22100.12.5e-2134.78 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G21330.13.8e-0951.79 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G33880.14.2e-0852.73 ROOT HAIR DEFECTIVE 6-LIKE 2[more]
AT1G27740.14.2e-0852.73 root hair defective 6-like 4[more]
AT5G09750.17.2e-0849.09 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659110756|ref|XP_008455394.1|1.9e-13581.37PREDICTED: transcription factor bHLH117 [Cucumis melo][more]
gi|778723880|ref|XP_011658716.1|2.1e-13480.43PREDICTED: transcription factor bHLH117 [Cucumis sativus][more]
gi|731409839|ref|XP_010657339.1|9.0e-5345.69PREDICTED: transcription factor bHLH117 [Vitis vinifera][more]
gi|1009131047|ref|XP_015882629.1|2.8e-4643.99PREDICTED: transcription factor bHLH117 [Ziziphus jujuba][more]
gi|703149269|ref|XP_010109560.1|5.5e-4242.60hypothetical protein L484_018295 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0048437 floral organ development
biological_process GO:0048438 floral whorl development
biological_process GO:0032259 methylation
biological_process GO:0048827 phyllome development
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0008168 methyltransferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G009680.1CmoCh19G009680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 186..238
score: 4.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 188..230
score: 2.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 186..235
score: 3.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 180..229
score: 13
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 182..238
score: 9.29
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 184..254
score: 2.9
NoneNo IPR availablePANTHERPTHR12565:SF160SUBFAMILY NOT NAMEDcoord: 184..254
score: 2.9

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G009680CmoCh11G019200Cucurbita moschata (Rifu)cmocmoB108
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G009680Cucurbita moschata (Rifu)cmocmoB177
CmoCh19G009680Cucurbita moschata (Rifu)cmocmoB381
CmoCh19G009680Cucurbita moschata (Rifu)cmocmoB389
CmoCh19G009680Cucurbita moschata (Rifu)cmocmoB394
CmoCh19G009680Cucurbita moschata (Rifu)cmocmoB400
CmoCh19G009680Cucumber (Gy14) v1cgycmoB0036
CmoCh19G009680Cucumber (Gy14) v1cgycmoB0109
CmoCh19G009680Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G009680Cucurbita maxima (Rimu)cmacmoB547
CmoCh19G009680Cucurbita maxima (Rimu)cmacmoB600
CmoCh19G009680Cucurbita maxima (Rimu)cmacmoB854
CmoCh19G009680Wild cucumber (PI 183967)cmocpiB498
CmoCh19G009680Wild cucumber (PI 183967)cmocpiB501
CmoCh19G009680Wild cucumber (PI 183967)cmocpiB517
CmoCh19G009680Cucumber (Chinese Long) v2cmocuB491
CmoCh19G009680Cucumber (Chinese Long) v2cmocuB493
CmoCh19G009680Melon (DHL92) v3.5.1cmomeB443
CmoCh19G009680Melon (DHL92) v3.5.1cmomeB476
CmoCh19G009680Watermelon (Charleston Gray)cmowcgB460
CmoCh19G009680Watermelon (Charleston Gray)cmowcgB456
CmoCh19G009680Watermelon (97103) v1cmowmB491
CmoCh19G009680Watermelon (97103) v1cmowmB495
CmoCh19G009680Cucurbita pepo (Zucchini)cmocpeB483
CmoCh19G009680Cucurbita pepo (Zucchini)cmocpeB500
CmoCh19G009680Bottle gourd (USVL1VR-Ls)cmolsiB455
CmoCh19G009680Bottle gourd (USVL1VR-Ls)cmolsiB462
CmoCh19G009680Cucumber (Gy14) v2cgybcmoB204
CmoCh19G009680Melon (DHL92) v3.6.1cmomedB552
CmoCh19G009680Silver-seed gourdcarcmoB0040
CmoCh19G009680Silver-seed gourdcarcmoB0462
CmoCh19G009680Silver-seed gourdcarcmoB0884
CmoCh19G009680Cucumber (Chinese Long) v3cmocucB0588
CmoCh19G009680Cucumber (Chinese Long) v3cmocucB0592
CmoCh19G009680Cucumber (Chinese Long) v3cmocucB0614
CmoCh19G009680Watermelon (97103) v2cmowmbB501
CmoCh19G009680Watermelon (97103) v2cmowmbB513
CmoCh19G009680Wax gourdcmowgoB0663
CmoCh19G009680Wax gourdcmowgoB0667