CmoCh19G009170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G009170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionO-methyltransferase 3
LocationCmo_Chr19 : 8555545 .. 8555818 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGGAGATGTTGAAGAAATGCAAAGAAGCAATCAGAAGCAATGGAAAGAAGGGGAAGGTGATGGTAATTGATATGGTGGTAGGCGACGAGAAAAGGGAGGATACGTTCATTCAAACTCAGTTGTTGTTTGATATGTTGATGATGGGTTTGGTAAGTGGAAAAGAGAGAGATGAGAAGGAGTGGAGTGAGTTATTCAAGGAAGCTGGATTCAGTGGCTACAAGATCTTTCCCATATTGGGTTCGAGGTCTCTTATCGAAATTTACCCATGA

mRNA sequence

ATGCGTGGAGATGTTGAAGAAATGCAAAGAAGCAATCAGAAGCAATGGAAAGAAGGGGAAGGTGATGGCGACGAGAAAAGGGAGGATACGTTCATTCAAACTCAGTTGTTGTTTGATATGTTGATGATGGGTTTGGTAAGTGGAAAAGAGAGAGATGAGAAGGAGTGGAGTGAGTTATTCAAGGAAGCTGGATTCAGTGGCTACAAGATCTTTCCCATATTGGGTTCGAGGTCTCTTATCGAAATTTACCCATGA

Coding sequence (CDS)

ATGCGTGGAGATGTTGAAGAAATGCAAAGAAGCAATCAGAAGCAATGGAAAGAAGGGGAAGGTGATGGCGACGAGAAAAGGGAGGATACGTTCATTCAAACTCAGTTGTTGTTTGATATGTTGATGATGGGTTTGGTAAGTGGAAAAGAGAGAGATGAGAAGGAGTGGAGTGAGTTATTCAAGGAAGCTGGATTCAGTGGCTACAAGATCTTTCCCATATTGGGTTCGAGGTCTCTTATCGAAATTTACCCATGA
Homology
[Close]
BLAST of CmoCh19G009170 vs. Swiss-Prot
Match: ROMT_VITVI (Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-13
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 1 

Query: 33  QTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIYP 85
           +TQL FDM MM    G+ERDE EW +LF +AGFS YKI PILG RSLIE+YP
Sbjct: 306 ETQLFFDMTMMIFAPGRERDENEWEKLFLDAGFSHYKITPILGLRSLIEVYP 357

[Close]
BLAST of CmoCh19G009170 vs. Swiss-Prot
Match: Q8OMT_MENPI (8-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita GN=OMT2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.3e-13
Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           DEK      +T+L FDM M+ +++GKER EKEW +LF +AGF+ YKI  +LG RS+IE++
Sbjct: 306 DEKETHEATETKLFFDMQMLAIITGKERSEKEWGKLFFDAGFTNYKITRVLGLRSVIEVF 365

Query: 84  P 85
           P
Sbjct: 366 P 366

[Close]
BLAST of CmoCh19G009170 vs. Swiss-Prot
Match: OMT3_SORBI (5-pentadecatrienyl resorcinol O-methyltransferase OS=Sorghum bicolor GN=OMT3 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-11
Identity = 30/62 (48.39%), Postives = 45/62 (72.58%), Query Frame = 1 

Query: 23  GDEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEI 82
           G +  +   ++TQ+++D+ +M  + G ERDE+EW ++F EAGF  YKI PILG RS+IE+
Sbjct: 314 GSDSSDTKLLETQVIYDLHLMK-IGGVERDEQEWKKIFLEAGFKDYKIMPILGLRSIIEL 373

Query: 83  YP 85
           YP
Sbjct: 374 YP 374

[Close]
BLAST of CmoCh19G009170 vs. Swiss-Prot
Match: HTOMT_CATRO (Tabersonine 16-O-methyltransferase OS=Catharanthus roseus GN=16OMT PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1 

Query: 25  EKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILG-SRSLIEIY 84
           +K++D  ++TQ   DM M+   + KER EKEW+ LFKEAGFS YKI+P L  +RSLIE+Y
Sbjct: 295 DKKDDHLVKTQTSMDMAMLVNFAAKERCEKEWAFLFKEAGFSDYKIYPKLDFTRSLIEVY 354

[Close]
BLAST of CmoCh19G009170 vs. Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.9e-11
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 1 

Query: 19  GEGDGDEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRS 78
           G G  D K ++     Q +FD+ +M  ++G ERDE+EWS++F EAG+S Y+I P+LG RS
Sbjct: 304 GAGPSDMKHKEM----QAIFDVYIM-FINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRS 363

Query: 79  LIEIYP 85
           +IE+YP
Sbjct: 364 IIEVYP 364

[Close]
BLAST of CmoCh19G009170 vs. TrEMBL
Match: F5A838_ROSCH (Orcinol O-methyltransferase-like protein OS=Rosa chinensis PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K ++  I+TQL FDMLMM LV+GKER+EKEW++LF +AGFS YKI PILG RSLIE+Y
Sbjct: 307 NQKGDEESIETQLFFDMLMMALVTGKERNEKEWAKLFTDAGFSDYKITPILGLRSLIEVY 366

Query: 84  P 85
           P
Sbjct: 367 P 367

[Close]
BLAST of CmoCh19G009170 vs. TrEMBL
Match: A0A151U124_CAJCA (Isoflavone-7-O-methyltransferase 9 OS=Cajanus cajan GN=KK1_005553 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-15
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           +EKR +  ++TQ+LFDMLMMGLV+GKER++KEW +L   AG+S YKI P+LG RSLIEIY
Sbjct: 289 NEKRNEESVETQILFDMLMMGLVTGKERNKKEWIKLISSAGYSNYKITPVLGLRSLIEIY 348

Query: 84  P 85
           P
Sbjct: 349 P 349

[Close]
BLAST of CmoCh19G009170 vs. TrEMBL
Match: A5BZY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020020 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K +D  ++TQL FDMLMM LV+G+ER+EKEW +LF +AGFSGYKI PILG RSLIE+Y
Sbjct: 297 NQKGDDESMETQLFFDMLMMILVTGQERNEKEWEKLFLDAGFSGYKITPILGLRSLIEVY 356

Query: 84  P 85
           P
Sbjct: 357 P 357

[Close]
BLAST of CmoCh19G009170 vs. TrEMBL
Match: F6H5H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02840 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K +D  ++TQL FDMLMM LV+G+ER+EKEW +LF +AGFSGYKI PILG RSLIE+Y
Sbjct: 297 NQKGDDESMETQLFFDMLMMILVTGQERNEKEWEKLFLDAGFSGYKITPILGLRSLIEVY 356

Query: 84  P 85
           P
Sbjct: 357 P 357

[Close]
BLAST of CmoCh19G009170 vs. TrEMBL
Match: A0A0B2PHL8_GLYSO (8-hydroxyquercetin 8-O-methyltransferase OS=Glycine soja GN=glysoja_044028 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-15
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           DEKR+D  ++TQL FDMLMM LV+GKER +KEW++L   AG++ YKI P+LG RSLIEIY
Sbjct: 203 DEKRDDESVETQLFFDMLMMVLVTGKERSKKEWAKLISSAGYNNYKITPVLGLRSLIEIY 262

Query: 84  P 85
           P
Sbjct: 263 P 263

[Close]
BLAST of CmoCh19G009170 vs. NCBI nr
Match: gi|470134582|ref|XP_004303127.1| (PREDICTED: trans-resveratrol di-O-methyltransferase-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K ++  ++TQL FDMLMM LV+GKER+EKEWS+LF +AGFS YKI PILG RSLIE+Y
Sbjct: 307 NQKGDEESMETQLFFDMLMMALVTGKERNEKEWSKLFTDAGFSDYKITPILGLRSLIEVY 366

Query: 84  P 85
           P
Sbjct: 367 P 367

[Close]
BLAST of CmoCh19G009170 vs. NCBI nr
Match: gi|330375623|gb|AEC13057.1| (orcinol O-methyltransferase-like protein [Rosa chinensis])

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K ++  I+TQL FDMLMM LV+GKER+EKEW++LF +AGFS YKI PILG RSLIE+Y
Sbjct: 307 NQKGDEESIETQLFFDMLMMALVTGKERNEKEWAKLFTDAGFSDYKITPILGLRSLIEVY 366

Query: 84  P 85
           P
Sbjct: 367 P 367

[Close]
BLAST of CmoCh19G009170 vs. NCBI nr
Match: gi|1012361765|gb|KYP72948.1| (Isoflavone-7-O-methyltransferase 9 [Cajanus cajan])

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-15
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           +EKR +  ++TQ+LFDMLMMGLV+GKER++KEW +L   AG+S YKI P+LG RSLIEIY
Sbjct: 289 NEKRNEESVETQILFDMLMMGLVTGKERNKKEWIKLISSAGYSNYKITPVLGLRSLIEIY 348

Query: 84  P 85
           P
Sbjct: 349 P 349

[Close]
BLAST of CmoCh19G009170 vs. NCBI nr
Match: gi|147816431|emb|CAN61955.1| (hypothetical protein VITISV_020020 [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K +D  ++TQL FDMLMM LV+G+ER+EKEW +LF +AGFSGYKI PILG RSLIE+Y
Sbjct: 297 NQKGDDESMETQLFFDMLMMILVTGQERNEKEWEKLFLDAGFSGYKITPILGLRSLIEVY 356

Query: 84  P 85
           P
Sbjct: 357 P 357

[Close]
BLAST of CmoCh19G009170 vs. NCBI nr
Match: gi|225446491|ref|XP_002278211.1| (PREDICTED: trans-resveratrol di-O-methyltransferase [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-15
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 1 

Query: 24  DEKREDTFIQTQLLFDMLMMGLVSGKERDEKEWSELFKEAGFSGYKIFPILGSRSLIEIY 83
           ++K +D  ++TQL FDMLMM LV+G+ER+EKEW +LF +AGFSGYKI PILG RSLIE+Y
Sbjct: 297 NQKGDDESMETQLFFDMLMMILVTGQERNEKEWEKLFLDAGFSGYKITPILGLRSLIEVY 356

Query: 84  P 85
           P
Sbjct: 357 P 357

The following BLAST results are available for this feature:
BLAST of CmoCh19G009170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ROMT_VITVI1.4e-1367.31Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2[more]
Q8OMT_MENPI5.3e-1352.468-hydroxyquercetin 8-O-methyltransferase OS=Mentha piperita GN=OMT2 PE=1 SV=1[more]
OMT3_SORBI1.0e-1148.395-pentadecatrienyl resorcinol O-methyltransferase OS=Sorghum bicolor GN=OMT3 PE=... [more]
HTOMT_CATRO1.3e-1155.74Tabersonine 16-O-methyltransferase OS=Catharanthus roseus GN=16OMT PE=1 SV=1[more]
ZRP4_MAIZE2.9e-1148.48O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1[more]
BLAST of CmoCh19G009170 vs. TrEMBL
Match NameE-valueIdentityDescription
F5A838_ROSCH1.4e-1567.21Orcinol O-methyltransferase-like protein OS=Rosa chinensis PE=3 SV=1[more]
A0A151U124_CAJCA1.8e-1565.57Isoflavone-7-O-methyltransferase 9 OS=Cajanus cajan GN=KK1_005553 PE=3 SV=1[more]
A5BZY9_VITVI2.3e-1567.21Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020020 PE=3 SV=1[more]
F6H5H6_VITVI2.3e-1567.21Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02840 PE=3 SV=... [more]
A0A0B2PHL8_GLYSO2.3e-1565.578-hydroxyquercetin 8-O-methyltransferase OS=Glycine soja GN=glysoja_044028 PE=3 ... [more]
BLAST of CmoCh19G009170 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh19G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|470134582|ref|XP_004303127.1|2.0e-1567.21PREDICTED: trans-resveratrol di-O-methyltransferase-like [Fragaria vesca subsp. ... [more]
gi|330375623|gb|AEC13057.1|2.0e-1567.21orcinol O-methyltransferase-like protein [Rosa chinensis][more]
gi|1012361765|gb|KYP72948.1|2.6e-1565.57Isoflavone-7-O-methyltransferase 9 [Cajanus cajan][more]
gi|147816431|emb|CAN61955.1|3.3e-1567.21hypothetical protein VITISV_020020 [Vitis vinifera][more]
gi|225446491|ref|XP_002278211.1|3.3e-1567.21PREDICTED: trans-resveratrol di-O-methyltransferase [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001077O_MeTrfase_2
IPR016461O-MeTrfase_COMT
Vocabulary: Molecular Function
TermDefinition
GO:0008171O-methyltransferase activity
GO:0008168methyltransferase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0006570 tyrosine metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016206 catechol O-methyltransferase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0008171 O-methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G009170.1CmoCh19G009170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001077O-methyltransferase, family 2PFAMPF00891Methyltransf_2coord: 28..70
score: 3.
IPR016461O-methyltransferase COMT-typePROFILEPS51683SAM_OMT_IIcoord: 1..84
score: 14
NoneNo IPR availablePANTHERPTHR11746O-METHYLTRANSFERASEcoord: 24..84
score: 1.9
NoneNo IPR availablePANTHERPTHR11746:SF99SUBFAMILY NOT NAMEDcoord: 24..84
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G009170Lsi11G014040Bottle gourd (USVL1VR-Ls)cmolsiB457
CmoCh19G009170MELO3C019324.2Melon (DHL92) v3.6.1cmomedB513
CmoCh19G009170CsaV3_7G003180Cucumber (Chinese Long) v3cmocucB0622
CmoCh19G009170Bhi05G001219Wax gourdcmowgoB0653
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G009170Cucumber (Gy14) v2cgybcmoB204
CmoCh19G009170Cucumber (Gy14) v2cgybcmoB927
CmoCh19G009170Melon (DHL92) v3.6.1cmomedB521
CmoCh19G009170Silver-seed gourdcarcmoB0286
CmoCh19G009170Cucumber (Chinese Long) v3cmocucB0592
CmoCh19G009170Watermelon (97103) v2cmowmbB512
CmoCh19G009170Wax gourdcmowgoB0663
CmoCh19G009170Cucurbita moschata (Rifu)cmocmoB108
CmoCh19G009170Cucurbita moschata (Rifu)cmocmoB381
CmoCh19G009170Cucumber (Gy14) v1cgycmoB0407
CmoCh19G009170Cucurbita maxima (Rimu)cmacmoB142
CmoCh19G009170Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G009170Cucurbita maxima (Rimu)cmacmoB547
CmoCh19G009170Wild cucumber (PI 183967)cmocpiB501
CmoCh19G009170Wild cucumber (PI 183967)cmocpiB524
CmoCh19G009170Cucumber (Chinese Long) v2cmocuB493
CmoCh19G009170Cucumber (Chinese Long) v2cmocuB518
CmoCh19G009170Melon (DHL92) v3.5.1cmomeB443
CmoCh19G009170Melon (DHL92) v3.5.1cmomeB452
CmoCh19G009170Watermelon (Charleston Gray)cmowcgB459
CmoCh19G009170Watermelon (97103) v1cmowmB496
CmoCh19G009170Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G009170Cucurbita pepo (Zucchini)cmocpeB483
CmoCh19G009170Cucurbita pepo (Zucchini)cmocpeB492