CmoCh19G008940 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G008940
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPectin lyase-like superfamily protein
LocationCmo_Chr19 : 8461339 .. 8462885 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCACTAACCATCTCAACATCATCCACATTCATCATCTTCTTCTTTCTTTGTCTCATCACAAATGGCCTAGCTGCTGATTTCCATGTCAAAAGATATGGAGCAAAAGCCAATGGCAACTCAGATGATAGCCAGGTTTGTTCCTATGGTACAAAATCTTATCATTATAATGTAGCTAGTTCGAACACGAAGTTGAATAACGTTTCGATTTTGAGTTTGAGAAAGCTAAAAGTTGATGAATTTGTTTGTAATGTAGGCGATTATGAGGGCTTGGAAGGATGCTTGCATGTCAAGAAAGGCAAGCAAAGTAGTGATATCAGGTGGGAGATATGTGGTGAATTCGATGAAGTTTAAAGGGCCATGCATGGCGCCCATTCATATTCAAATGGAGGGCAGACTCGAAGCGCCCCTCAATATTCAACACATGAAATCTGACGATAATTGGATCATTTTTGAGTACATTAATGCTTTAACAATTTCTGGAAAAGGCATTTTTGATGGCCGAGGATCTCTTGCTTGGAAGCAAAATCAATGCGCTTCTTCTGGAAAATGCGACTCTCTCCCTATTGTGAGTCTTCATTCGTTAATATATTCATTTTGGTCCTTAAAACTTCTACGTATCATTAACCATGCATGTTTGACAAGAAGTTTTCTTGGATTGTAAGCTAACGAATGCGTATTGTTTACAATAGAGCTTGAGATTCTACAGCCTCAACAACACTGTAATCCGAGGCATAACTTCAACAGACAGTAAGTTCTTCCACATGAACGTGCACAACTGCAGGAACATGACCCTTCAAAACATCATCATCAACGCCCCCGGCGTAAGTCCCAACACTGACGGGATCCATATTGGAGGATCGAGCGGGGTGACTATAAGCAATGCCAAGATCGAAACGGGTGACGATTGTGTCTCGATCGGCGACGGAAGCCAACAGATAACCGTCGAGAAGGTGACATGCGGTCCTGGCCATGGGATTAGCATTGGAAGCCTTGGAAAGTACAAGAATGAGAAGCCAGTGTCAGGAGTCCTTGTGAGAAATTGCACAATCAAAAACACCATGTTCGGAGTTAGGATCAAAACATGGCCAGATTCTACGCTAGGGATTGCCACCAATATGCACTTTGATAGTATTGTGATGAAGAATGTTGGCACTCCTATCCTAATTGATCAACAATATTGCCCATATGGAAAGTGCCGATTCAAGGTATTTCTATGTTTAATACGTTCTTCTTTGAAAAACTTAAACCCCGTTGGATAACTATTTGATTTTAGAATGTGATTTGTGTTGAACCTGTAGATTCCATCTAGAGTTGCAATAAGCGATGTTGGATTCAGGAACATCGTAGGGACATCGACAACTCGAGTGGCTGTAAAGCTTGTGTGCAGCCGAGGGTATCCGTGCAAGAACGTGAAGCTATCAAACATAAACTTGAGATACATAGGCACCAATGGCACAGCCATATCAGAATGTTCCAATGTGAAGCCTACAATATCTGGAAGAGTGATGCCGCCACCCTGCACTAGGGCCTTTGCAATATGA

mRNA sequence

ATGTCTTCACTAACCATCTCAACATCATCCACATTCATCATCTTCTTCTTTCTTTGTCTCATCACAAATGGCCTAGCTGCTGATTTCCATGTCAAAAGATATGGAGCAAAAGCCAATGGCAACTCAGATGATAGCCAGGCGATTATGAGGGCTTGGAAGGATGCTTGCATGTCAAGAAAGGCAAGCAAAGTAGTGATATCAGGTGGGAGATATGTGGTGAATTCGATGAAGTTTAAAGGGCCATGCATGGCGCCCATTCATATTCAAATGGAGGGCAGACTCGAAGCGCCCCTCAATATTCAACACATGAAATCTGACGATAATTGGATCATTTTTGAGTACATTAATGCTTTAACAATTTCTGGAAAAGGCATTTTTGATGGCCGAGGATCTCTTGCTTGGAAGCAAAATCAATGCGCTTCTTCTGGAAAATGCGACTCTCTCCCTATTAGCTTGAGATTCTACAGCCTCAACAACACTGTAATCCGAGGCATAACTTCAACAGACAGTAAGTTCTTCCACATGAACGTGCACAACTGCAGGAACATGACCCTTCAAAACATCATCATCAACGCCCCCGGCGTAAGTCCCAACACTGACGGGATCCATATTGGAGGATCGAGCGGGGTGACTATAAGCAATGCCAAGATCGAAACGGGTGACGATTGTGTCTCGATCGGCGACGGAAGCCAACAGATAACCGTCGAGAAGGTGACATGCGGTCCTGGCCATGGGATTAGCATTGGAAGCCTTGGAAAGTACAAGAATGAGAAGCCAGTGTCAGGAGTCCTTGTGAGAAATTGCACAATCAAAAACACCATGTTCGGAGTTAGGATCAAAACATGGCCAGATTCTACGCTAGGGATTGCCACCAATATGCACTTTGATAGTATTGTGATGAAGAATGTTGGCACTCCTATCCTAATTGATCAACAATATTGCCCATATGGAAAGTGCCGATTCAAGATTCCATCTAGAGTTGCAATAAGCGATGTTGGATTCAGGAACATCGTAGGGACATCGACAACTCGAGTGGCTGTAAAGCTTGTGTGCAGCCGAGGGTATCCGTGCAAGAACGTGAAGCTATCAAACATAAACTTGAGATACATAGGCACCAATGGCACAGCCATATCAGAATGTTCCAATGTGAAGCCTACAATATCTGGAAGAGTGATGCCGCCACCCTGCACTAGGGCCTTTGCAATATGA

Coding sequence (CDS)

ATGTCTTCACTAACCATCTCAACATCATCCACATTCATCATCTTCTTCTTTCTTTGTCTCATCACAAATGGCCTAGCTGCTGATTTCCATGTCAAAAGATATGGAGCAAAAGCCAATGGCAACTCAGATGATAGCCAGGCGATTATGAGGGCTTGGAAGGATGCTTGCATGTCAAGAAAGGCAAGCAAAGTAGTGATATCAGGTGGGAGATATGTGGTGAATTCGATGAAGTTTAAAGGGCCATGCATGGCGCCCATTCATATTCAAATGGAGGGCAGACTCGAAGCGCCCCTCAATATTCAACACATGAAATCTGACGATAATTGGATCATTTTTGAGTACATTAATGCTTTAACAATTTCTGGAAAAGGCATTTTTGATGGCCGAGGATCTCTTGCTTGGAAGCAAAATCAATGCGCTTCTTCTGGAAAATGCGACTCTCTCCCTATTAGCTTGAGATTCTACAGCCTCAACAACACTGTAATCCGAGGCATAACTTCAACAGACAGTAAGTTCTTCCACATGAACGTGCACAACTGCAGGAACATGACCCTTCAAAACATCATCATCAACGCCCCCGGCGTAAGTCCCAACACTGACGGGATCCATATTGGAGGATCGAGCGGGGTGACTATAAGCAATGCCAAGATCGAAACGGGTGACGATTGTGTCTCGATCGGCGACGGAAGCCAACAGATAACCGTCGAGAAGGTGACATGCGGTCCTGGCCATGGGATTAGCATTGGAAGCCTTGGAAAGTACAAGAATGAGAAGCCAGTGTCAGGAGTCCTTGTGAGAAATTGCACAATCAAAAACACCATGTTCGGAGTTAGGATCAAAACATGGCCAGATTCTACGCTAGGGATTGCCACCAATATGCACTTTGATAGTATTGTGATGAAGAATGTTGGCACTCCTATCCTAATTGATCAACAATATTGCCCATATGGAAAGTGCCGATTCAAGATTCCATCTAGAGTTGCAATAAGCGATGTTGGATTCAGGAACATCGTAGGGACATCGACAACTCGAGTGGCTGTAAAGCTTGTGTGCAGCCGAGGGTATCCGTGCAAGAACGTGAAGCTATCAAACATAAACTTGAGATACATAGGCACCAATGGCACAGCCATATCAGAATGTTCCAATGTGAAGCCTACAATATCTGGAAGAGTGATGCCGCCACCCTGCACTAGGGCCTTTGCAATATGA
Homology
[Close]
BLAST of CmoCh19G008940 vs. Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-121
Identity = 210/375 (56.00%), Postives = 270/375 (72.00%), Query Frame = 1 

Query: 24  GLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCM 83
           G A D  VK  GAK +  +DDS A   AWK+AC +   S + +  G Y+V S++FKGPC 
Sbjct: 67  GAAVD--VKASGAKGDSKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCK 126

Query: 84  APIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISG-KGIFDGRGSLAWKQNQCASS 143
            P+ +++ G  +AP  ++  K    WI FE I   T++G K IFDG+GSLAWK N CA +
Sbjct: 127 GPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKT 186

Query: 144 GKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGI 203
           GKC+SLPI++RF  L N+ I  ITST+SK FHMN+ NC+N+TL +I I+AP  S NTDGI
Sbjct: 187 GKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGI 246

Query: 204 HIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSG 263
           HIG S+GV +  AKI+TGDDCVSIGDG++ + VE V CGPGHGISIGSLG+Y NE+PV G
Sbjct: 247 HIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKG 306

Query: 264 VLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFK 323
           V VR C IKNT  GVRIKTWP S  GIA+N+ F+ I M NV  P+LIDQ+YCPYG C+  
Sbjct: 307 VTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAG 366

Query: 324 IPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSN 383
           +PS+V +SDV  + I GTS T+VAVKL+CS+G PC N+ LS+INL + G  G A+S CSN
Sbjct: 367 VPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 426

Query: 384 VKPTISGRVMPPPCT 398
           +KP +SG+++P  CT
Sbjct: 427 IKPILSGKLVPAACT 437

[Close]
BLAST of CmoCh19G008940 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 3.2e-108
Identity = 186/366 (50.82%), Postives = 248/366 (67.76%), Query Frame = 1 

Query: 29  FHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCM-APIH 88
           F+V  YGAK  G  D SQA+M+AWK AC S+  S V+I  G Y +  +  +GPC  + I 
Sbjct: 10  FNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIG 69

Query: 89  IQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLAWKQNQCASSGKCDS 148
            Q++G ++AP +    KSD  W+ F  I+ LT+SG G  DG+G  AW +N C  +  C  
Sbjct: 70  FQIDGVVKAPADPSKFKSD-GWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKH 129

Query: 149 LPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIGGS 208
             ++LRF  L + ++R ITS +SK FH+NV  C ++T Q++ + APG S NTDGIH+G S
Sbjct: 130 AAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGIS 189

Query: 209 SGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLVRN 268
            GVTI+N KI TGDDC+SIG GSQ +T+ +V CGPGHGISIGSLG+Y NEK V G+ V+ 
Sbjct: 190 KGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKG 249

Query: 269 CTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPSRV 328
           CT   TM GVR+KTWP+S  G AT++ F  + M NV  P+++DQ+YCPYG+C  + PSR+
Sbjct: 250 CTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRI 309

Query: 329 AISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKPTI 388
            +S++ F NI GTST +VAV + CS G PC N+K+  INL Y G  G A S CSNVKPT 
Sbjct: 310 KLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTF 369

Query: 389 SGRVMP 394
           SG+ +P
Sbjct: 370 SGKQVP 372

[Close]
BLAST of CmoCh19G008940 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.3e-106
Identity = 180/360 (50.00%), Postives = 248/360 (68.89%), Query Frame = 1 

Query: 43  DDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQH 102
           D +QA+  AWK+AC S   S +++  G + V  +  +GPC + I +Q++G L+AP +   
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 103 MKSDDNWIIFEYINALTISGKGIFDGRGSLAWKQNQCASSGK-CDSLPISLRFYSLNNTV 162
           +K    WI    I+ LTI G G+FDG+G  AW QN C  +G  C +L ++LR Y++ N++
Sbjct: 61  IKGL-GWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSI 120

Query: 163 IRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNAKIETGD 222
           +R +T+ DSK FH+NV  C+N+T +   I+A   S NTDGIHIG S GV I N +I+TGD
Sbjct: 121 LRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGD 180

Query: 223 DCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLVRNCTIKNTMFGVRIKT 282
           DC+S+GDGS+ I +  +TCGPGHGIS+GSLG+YKNE+ V G+ V+NCTI  +  GVRIKT
Sbjct: 181 DCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKT 240

Query: 283 WPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPSRVAISDVGFRNIVGTS 342
           WP S  G A+ MHF  I M +VGTPILIDQ YCPY +C  ++PS V +S + F+NI GTS
Sbjct: 241 WPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 343 TTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKPTISGRVMPPPCTRAFA 402
           TT+ AVKLVCS+ +PC  V+L++I+L Y G  G A S C N+KPTI G+ +P  C+ + A
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICSGSAA 359

[Close]
BLAST of CmoCh19G008940 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.8e-105
Identity = 178/367 (48.50%), Postives = 255/367 (69.48%), Query Frame = 1 

Query: 31  VKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCMAPIHIQM 90
           V ++GAKA+G +D S+  + AWK+AC S   S VVI  G Y+++ +  +GPC API I +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 91  EGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLAWKQNQCASSGKCDSLPI 150
           +G ++AP +    K D NW+ F  +    + G GIFDG+GS+A+++N C +      LP+
Sbjct: 92  QGTIQAPADPSAFK-DPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPV 151

Query: 151 SLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIGGSSGV 210
           ++RF  L N +I+ ITS DSK FH+NV  C+N+TL+ + I AP  SPNTDGIH+G S GV
Sbjct: 152 NIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 211

Query: 211 TISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLVRNCTI 270
            I  + I+TGDDC+SIGDG++ + ++++TCGPGHGISIGSLGK++NE+PV G+ + NCTI
Sbjct: 212 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 271

Query: 271 KNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPSRVAIS 330
            NT  G RIKTWP    G  + +HF+ I M NV +PILIDQQYCP+ KC+    S+V +S
Sbjct: 272 TNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 331

Query: 331 DVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKPTISGR 390
           ++ F+NI GTS    A+K +CS   PC+NV+L++I++++ G    A S+C NVKP  SG+
Sbjct: 332 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITSGK 391

Query: 391 VMPPPCT 398
           + P PC+
Sbjct: 392 LNPIPCS 396

[Close]
BLAST of CmoCh19G008940 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-103
Identity = 176/367 (47.96%), Postives = 254/367 (69.21%), Query Frame = 1 

Query: 31  VKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCMAPIHIQM 90
           V ++GAKA+G +D S+  + AWK+AC S   S VVI  G Y+++ +  +GPC API I +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINV 91

Query: 91  EGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLAWKQNQCASSGKCDSLPI 150
           +G ++AP +    K D NW+ F  +    + G GIFDG+GS+A+++N C +      LP+
Sbjct: 92  QGTIQAPADPSAFK-DPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPV 151

Query: 151 SLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIGGSSGV 210
           ++RF  + N +I+ ITS DSK FH+NV  C+N+TL+ + I AP  SPNTDGIH+G S GV
Sbjct: 152 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 211

Query: 211 TISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLVRNCTI 270
            I  + I+TGDDC+SIGDG++ + ++++TCGPGHGISIGSLGK++NE+PV G+ + NCTI
Sbjct: 212 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 271

Query: 271 KNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPSRVAIS 330
            NT  G RIKTWP    G  + +HF+ I M NV +PILIDQQYCP+ KC+    S+V +S
Sbjct: 272 TNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 331

Query: 331 DVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKPTISGR 390
           ++ F+NI GTS    A+K +CS   PC+NV+L++I++++ G    A S+C NVKP   G+
Sbjct: 332 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAE-PATSQCLNVKPITIGK 391

Query: 391 VMPPPCT 398
           + P PC+
Sbjct: 392 LNPIPCS 396

[Close]
BLAST of CmoCh19G008940 vs. TrEMBL
Match: A0A0A0K6I9_CUCSA (Polygalacturonase OS=Cucumis sativus GN=Csa_7G033440 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 5.7e-152
Identity = 259/319 (81.19%), Postives = 291/319 (91.22%), Query Frame = 1 

Query: 1   MSSLTISTSSTFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRK 60
           MSS TIS S+TFI+F F+ LITN  AADFHVKRYGA+ANGNSDDSQAIM+AWKDAC S K
Sbjct: 1   MSSSTISRSTTFILFLFIGLITNAQAADFHVKRYGARANGNSDDSQAIMKAWKDACSSTK 60

Query: 61  ASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTI 120
            SK+VI GGRYVV+SMKF+GPC+APIH+Q+EGRL+AP NI+ M++D +WI+F+YIN LT+
Sbjct: 61  PSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLTL 120

Query: 121 SGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNC 180
           SGKG FDGRGSLAWKQNQCASSGKC SLPISLRFYSLNN++I+ ITSTDSKFFH+NVHNC
Sbjct: 121 SGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFYSLNNSLIKDITSTDSKFFHVNVHNC 180

Query: 181 RNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTC 240
           RN+TLQNI I+APG SPNTDGIHIGGSSGVTI NA+I+TGDDCVSIGDGSQQI VEKVTC
Sbjct: 181 RNLTLQNINIDAPGDSPNTDGIHIGGSSGVTIHNARIKTGDDCVSIGDGSQQIKVEKVTC 240

Query: 241 GPGHGISIGSLGKYKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVM 300
           GPGHGISIGSLGKYKNEKPVSG+ VR+CTI NTMFGVRIK+WP ST GIA+NM F+SIVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKSWPASTKGIASNMQFESIVM 300

Query: 301 KNVGTPILIDQQYCPYGKC 320
            NVGTPILIDQQYCPYG C
Sbjct: 301 NNVGTPILIDQQYCPYGTC 319

[Close]
BLAST of CmoCh19G008940 vs. TrEMBL
Match: A0A161ZUB4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021113 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.2e-133
Identity = 216/380 (56.84%), Postives = 296/380 (77.89%), Query Frame = 1 

Query: 18  LCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMK 77
           + +IT    A    K+ GAK +G +DDSQAI  AW+ AC S   SK++I  G+Y V  M 
Sbjct: 1   MSIITRSQGAVIDAKQNGAKGDGVTDDSQAITSAWQSACSSPTPSKLLIPAGQYAVGPMT 60

Query: 78  FKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLAWKQN 137
           F GPC API +Q +G L+AP ++  +KS D WI+F+ ++A+T+SG G+FDG+G +AW QN
Sbjct: 61  FLGPCKAPITVQFDGNLKAPTDLNKLKSQDGWIVFQQVDAMTLSG-GVFDGQGKVAWSQN 120

Query: 138 QCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSP 197
            CA +GKC +LPI++RF  + N++++GI+S DSK FHMN+  C+N+TL +I INAPG S 
Sbjct: 121 NCAQTGKCSNLPINIRFNKVTNSMVQGISSVDSKLFHMNILQCQNLTLSHITINAPGDSL 180

Query: 198 NTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNE 257
           NTDGIHIG SSG+TIS++ I+TGDDCVS+GDGSQQ+T+E+VTCGPGHGIS+GSLGKY +E
Sbjct: 181 NTDGIHIGRSSGITISDSDIKTGDDCVSMGDGSQQVTIERVTCGPGHGISVGSLGKYHDE 240

Query: 258 KPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYG 317
           +PV GV VR+CT  NTM GVR+KTWP S  G+  ++HF+++ M NVGTPILIDQQYCPYG
Sbjct: 241 QPVMGVFVRDCTFTNTMNGVRVKTWPASPNGVCQDLHFENLKMDNVGTPILIDQQYCPYG 300

Query: 318 KCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAI 377
           +C+ + PS+V IS+V F+ I GTS+T+VA+K+ CS+G PC+NV+L++INL+Y G +G  +
Sbjct: 301 QCQAQAPSKVKISEVSFKGIHGTSSTKVAIKIACSKGIPCQNVELNDINLQYHGPDGNGV 360

Query: 378 SECSNVKPTISGRVMPPPCT 398
           S+C NV PT++G++ PP CT
Sbjct: 361 SQCVNVLPTMNGQIFPPACT 379

[Close]
BLAST of CmoCh19G008940 vs. TrEMBL
Match: D9ZHD7_HYPPE (Polygalacturonase OS=Hypericum perforatum GN=PG PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.7e-125
Identity = 215/387 (55.56%), Postives = 281/387 (72.61%), Query Frame = 1 

Query: 14  IFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVV 73
           + F L  +    A    VK YG K +G +DDSQAI +AWKDAC +  A+ + I  G Y+V
Sbjct: 12  LLFLLHSVILAKALTLDVKHYGVKVDGKTDDSQAINKAWKDACAATNATTLRIGKGNYMV 71

Query: 74  NSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLA 133
           + M F+GPC +P+ +  +G  +AP N ++ K+ + W+ F  +N LT+ G G FDG+G++A
Sbjct: 72  SKMAFQGPCKSPLTVDFQGTFKAPSNAKNYKNQE-WVSFTNLNGLTLFGGGTFDGQGAVA 131

Query: 134 WKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAP 193
           W  N CA +GKC SLP +LR   L N++IR ITS DSK FH+N+ NC+N+TL+ I I AP
Sbjct: 132 WSINNCAKTGKCGSLPNNLRMTGLTNSIIRDITSLDSKLFHINIINCKNLTLERITITAP 191

Query: 194 GVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGK 253
             S NTDGIHIG S+GV I++A I+TGDDCVSIGDG+QQI +EKVTCGPGHGISIGSLG+
Sbjct: 192 ESSLNTDGIHIGRSTGVNITSATIKTGDDCVSIGDGAQQINIEKVTCGPGHGISIGSLGR 251

Query: 254 YKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQY 313
           Y +E+PV G+ V+NCT+ +TM GVRIKTWP S  G+A+NM F++I+M NV  PI+IDQQY
Sbjct: 252 YHDEQPVVGITVKNCTLTSTMNGVRIKTWPASPSGLASNMRFENIIMNNVSNPIMIDQQY 311

Query: 314 CPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTN 373
           CPY +C  KIPSRV ISDV F  I GTS T++AVKLVCS+G PC+NV + +INL Y    
Sbjct: 312 CPYSQCEAKIPSRVKISDVSFSGIRGTSATQLAVKLVCSKGIPCQNVAVGDINLAY--NK 371

Query: 374 GTAISECSNVKPTISGRVMPPPCTRAF 401
           G A S+C+NVKP + G V+P PCT  +
Sbjct: 372 GQATSQCANVKPQVRGSVVPAPCTEQY 395

[Close]
BLAST of CmoCh19G008940 vs. TrEMBL
Match: D7L721_ARALL (Exopolygalacturonase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478122 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.3e-123
Identity = 212/372 (56.99%), Postives = 275/372 (73.92%), Query Frame = 1 

Query: 27  ADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCMAPI 86
           A   VK  GAK +G +DDS A M AWK+AC +   S + +  G Y+V S++FKGPC  P+
Sbjct: 73  ASLDVKASGAKGDGKTDDSAAFMAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPV 132

Query: 87  HIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISG-KGIFDGRGSLAWKQNQCASSGKC 146
            +++ G L+AP  ++  K    WI FE +   T++G K IFDG+GSLAWK N CA +GKC
Sbjct: 133 TLELNGNLKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 192

Query: 147 DSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIG 206
           +SLPI++RF  L N+ I+ ITST+SK FHMN+ NC+N+TL++I I+AP  S NTDGIHIG
Sbjct: 193 NSLPINIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPESLNTDGIHIG 252

Query: 207 GSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLV 266
            S+GV +  AKI+TGDDCVSIGDG++ + VE V CGPGHGISIGSLG+Y NE+PV GV V
Sbjct: 253 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 312

Query: 267 RNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPS 326
           R C IKNT  GVRIKTWP S  GIA+N+ F+ I M NV TP+LIDQ+YCPYG C+  +PS
Sbjct: 313 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPYGHCKAGVPS 372

Query: 327 RVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKP 386
           +V +SDV  +NI GTS T+VAVKL+CS+G PC N+ LS+INL + G  G A+S CSN+KP
Sbjct: 373 KVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKP 432

Query: 387 TISGRVMPPPCT 398
            +SG+++P  CT
Sbjct: 433 ILSGKLVPAACT 442

[Close]
BLAST of CmoCh19G008940 vs. TrEMBL
Match: D7MX60_ARALL (Polygalacturonase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_497387 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 9.5e-123
Identity = 211/372 (56.72%), Postives = 274/372 (73.66%), Query Frame = 1 

Query: 27  ADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCMAPI 86
           A   VK  GAK +G +DDS A   AWK+AC +   S + +  G Y+V S++FKGPC  P+
Sbjct: 69  ASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPV 128

Query: 87  HIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKG-IFDGRGSLAWKQNQCASSGKC 146
            +++ G L+AP  ++  K    WI FE I   T++G G IFDG+GSLAWK N CA +GKC
Sbjct: 129 TLELNGNLKAPATVKTSKPHSGWIDFENIADFTLNGNGAIFDGQGSLAWKANDCAKTGKC 188

Query: 147 DSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIG 206
           +SLPI++RF  L N+ I+ ITST+SK FHMN+ NC+N+TL++I I+AP  S NTDGIHIG
Sbjct: 189 NSLPINIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPESLNTDGIHIG 248

Query: 207 GSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLV 266
            S+GV +  AKI+TGDDCVSIGDG++ + VE V CGPGHGISIGSLG+Y NE+PV GV V
Sbjct: 249 RSNGVNLLGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 308

Query: 267 RNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPS 326
           R C IKNT  GVRIKTWP S  GIA+N+ F+ I M NV TP+LIDQ+YCPYG C+  +PS
Sbjct: 309 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPYGHCKAGVPS 368

Query: 327 RVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKP 386
           +V +SDV  +NI GTS T+VAVKL+CS+G PC N+ L++INL + G  G A+S CSN+KP
Sbjct: 369 KVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALADINLVHNGKEGPAVSACSNIKP 428

Query: 387 TISGRVMPPPCT 398
            +SG+++P  CT
Sbjct: 429 ILSGKLVPAACT 438

[Close]
BLAST of CmoCh19G008940 vs. TAIR10
Match: AT3G14040.1 (AT3G14040.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 441.8 bits (1135), Expect = 4.5e-124
Identity = 209/372 (56.18%), Postives = 270/372 (72.58%), Query Frame = 1 

Query: 27  ADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCMAPI 86
           A   VK  GAK +G +DDS A   AWK+AC +   S + +  G Y+V S++FKGPC  P+
Sbjct: 69  ASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPV 128

Query: 87  HIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISG-KGIFDGRGSLAWKQNQCASSGKC 146
            +++ G  +AP  ++  K    WI FE +   T++G K IFDG+GSLAWK N CA +GKC
Sbjct: 129 TLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 188

Query: 147 DSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGIHIG 206
           +SLPI++RF  L N+ I  ITST+SK FHMN+ NC+N+TL +I I+AP  S NTDGIHIG
Sbjct: 189 NSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIG 248

Query: 207 GSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSGVLV 266
            S+GV +  AKI+TGDDCVSIGDG++ + VE V CGPGHGISIGSLG+Y NE+PV GV V
Sbjct: 249 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 308

Query: 267 RNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFKIPS 326
           R C IKNT  GVRIKTWP S  GIA+N+ F+ I M NV  P+LIDQ+YCPYG C+  +PS
Sbjct: 309 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPS 368

Query: 327 RVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSNVKP 386
           +V +SDV  +NI GTS T+VAVKL+CS+G PC N+ LS+INL + G  G A+S CSN+KP
Sbjct: 369 KVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKP 428

Query: 387 TISGRVMPPPCT 398
            +SG+++P  CT
Sbjct: 429 ILSGKLVPAACT 438

[Close]
BLAST of CmoCh19G008940 vs. TAIR10
Match: AT3G07850.1 (AT3G07850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 437.6 bits (1124), Expect = 8.5e-123
Identity = 210/375 (56.00%), Postives = 270/375 (72.00%), Query Frame = 1 

Query: 24  GLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNSMKFKGPCM 83
           G A D  VK  GAK +  +DDS A   AWK+AC +   S + +  G Y+V S++FKGPC 
Sbjct: 67  GAAVD--VKASGAKGDSKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCK 126

Query: 84  APIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISG-KGIFDGRGSLAWKQNQCASS 143
            P+ +++ G  +AP  ++  K    WI FE I   T++G K IFDG+GSLAWK N CA +
Sbjct: 127 GPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKT 186

Query: 144 GKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGVSPNTDGI 203
           GKC+SLPI++RF  L N+ I  ITST+SK FHMN+ NC+N+TL +I I+AP  S NTDGI
Sbjct: 187 GKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGI 246

Query: 204 HIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYKNEKPVSG 263
           HIG S+GV +  AKI+TGDDCVSIGDG++ + VE V CGPGHGISIGSLG+Y NE+PV G
Sbjct: 247 HIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKG 306

Query: 264 VLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGTPILIDQQYCPYGKCRFK 323
           V VR C IKNT  GVRIKTWP S  GIA+N+ F+ I M NV  P+LIDQ+YCPYG C+  
Sbjct: 307 VTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAG 366

Query: 324 IPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNGTAISECSN 383
           +PS+V +SDV  + I GTS T+VAVKL+CS+G PC N+ LS+INL + G  G A+S CSN
Sbjct: 367 VPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSN 426

Query: 384 VKPTISGRVMPPPCT 398
           +KP +SG+++P  CT
Sbjct: 427 IKPILSGKLVPAACT 437

[Close]
BLAST of CmoCh19G008940 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 367.9 bits (943), Expect = 8.2e-102
Identity = 176/383 (45.95%), Postives = 261/383 (68.15%), Query Frame = 1 

Query: 16  FFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVNS 75
           F +CL+  G++A+  V   G+ +   SD +QA+++A+  AC S   SKVVI  G + +  
Sbjct: 11  FIICLL--GISANAEVFTIGSSSG--SDITQALLKAFTSACQSSSPSKVVIPKGEFKLGE 70

Query: 76  MKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLAWK 135
           ++ +GPC API + ++G ++A  N   ++  + W++F  I+   ++G G FDG G+ AW+
Sbjct: 71  IEMRGPCKAPIEVTLQGTVKADGNA--IQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWR 130

Query: 136 QNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPGV 195
            N C  + +C  LPIS+RF  + N+ IR I+S D+K FH+NV   +NMT+ NI I AP  
Sbjct: 131 VNNCHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPED 190

Query: 196 SPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKYK 255
           SPNTDGIH+G S GV I N+ I TGDDC+S+GDG + + VEKVTCGPGHGIS+GSLG+Y 
Sbjct: 191 SPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYG 250

Query: 256 NEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLG-IATNMHFDSIVMKNVGTPILIDQQYC 315
           +E+ VSG+ V NCT++ T  G+RIKTWP +     A+++HF+ I++K+V  PILIDQ+YC
Sbjct: 251 HEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYC 310

Query: 316 PYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTNG 375
           P+ +C  +  S + + ++ F+NI GTS  + AVKL+CS+GYPC+NV++ +I+++Y G +G
Sbjct: 311 PWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADG 370

Query: 376 TAISECSNVKPTISGRVMPPPCT 398
            A   CSNV P I G   P  C+
Sbjct: 371 PATFHCSNVSPKILGSQSPKACS 387

[Close]
BLAST of CmoCh19G008940 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 365.2 bits (936), Expect = 5.3e-101
Identity = 173/384 (45.05%), Postives = 256/384 (66.67%), Query Frame = 1 

Query: 15  FFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVVN 74
           FF  CL+  GL+A+   K +   +   SD + A+++A+ +AC     S V+I  G Y + 
Sbjct: 11  FFVFCLL--GLSAN--AKIFNINSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLG 70

Query: 75  SMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLAW 134
            +   GPC API I + G ++A  N       + W+ F  IN   ++G G+FDG G+ AW
Sbjct: 71  EIVMMGPCKAPIRIALLGTVKADGNAN---GKEKWVAFRNINGFKLNGGGVFDGEGNAAW 130

Query: 135 KQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAPG 194
           + N C  +  C  LPIS+RF  + +  IRGITS D+K FH+NV   +N+T +++ I AP 
Sbjct: 131 RVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPA 190

Query: 195 VSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGKY 254
            SPNTDGIH+G S G+ I N+ I TGDDCVS+GDG + + VE+VTCGPGHGISIGSLG+Y
Sbjct: 191 ESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRY 250

Query: 255 KNEKPVSGVLVRNCTIKNTMFGVRIKTWPDST-LGIATNMHFDSIVMKNVGTPILIDQQY 314
            +E+ VSG+ + NCT++ T  G+RIKTWP +     A+++HF++I++KNV  PILIDQ+Y
Sbjct: 251 SHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEY 310

Query: 315 CPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGTN 374
           CP+ +C  + PS + ++++ F+ I GTS  + AVKL+CS+GYPC+NV++ ++N++Y G +
Sbjct: 311 CPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGAD 370

Query: 375 GTAISECSNVKPTISGRVMPPPCT 398
           G A  +CSNV P + G  +P  C+
Sbjct: 371 GPATFQCSNVSPKLVGTQIPKACS 387

[Close]
BLAST of CmoCh19G008940 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-100
Identity = 174/385 (45.19%), Postives = 254/385 (65.97%), Query Frame = 1 

Query: 14  IFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYVV 73
           + F + L+  G +A+  V   G      SD +QA+++A+  AC +  ASKVVI+ G + +
Sbjct: 10  VLFVISLL--GFSANAEVFNVGGSPG--SDITQALLKAFTSACQAPTASKVVITKGEFKL 69

Query: 74  NSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSLA 133
             ++  GPC AP+ I ++G L+A  + + ++  + W++F  IN   ++G GIFDG G+ A
Sbjct: 70  GEIEMTGPCKAPVEINLQGTLKA--DGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAA 129

Query: 134 WKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINAP 193
           W+ N C  + +C  LPIS+RF  + N  IR I+S D+K FH+NV   +NMT  N+ + AP
Sbjct: 130 WRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAP 189

Query: 194 GVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLGK 253
             SPNTDGIH+G S GV I N+KI TGDDC+S+GDG + + VE V CGPGHGIS+GSLG+
Sbjct: 190 AESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGR 249

Query: 254 YKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLG-IATNMHFDSIVMKNVGTPILIDQQ 313
           Y +E+ V+G+ V NCT++ T  G+RIKTWP +     A+ +HF++I++ NV  PILIDQ+
Sbjct: 250 YVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQE 309

Query: 314 YCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIGT 373
           YCP+ +C  + PS + + D+ F+NI GTS  + AVKL+CS+ +PC NV++ NINL Y G 
Sbjct: 310 YCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGA 369

Query: 374 NGTAISECSNVKPTISGRVMPPPCT 398
           +G     CSNV P + G   P  C+
Sbjct: 370 DGPPTFMCSNVSPKLVGTQNPKACS 388

[Close]
BLAST of CmoCh19G008940 vs. NCBI nr
Match: gi|449453736|ref|XP_004144612.1| (PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis sativus])

HSP 1 Score: 680.2 bits (1754), Expect = 2.1e-192
Identity = 326/401 (81.30%), Postives = 365/401 (91.02%), Query Frame = 1 

Query: 1   MSSLTISTSSTFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRK 60
           MSS TIS S+TFI+F F+ LITN  AADFHVKRYGA+ANGNSDDSQAIM+AWKDAC S K
Sbjct: 1   MSSSTISRSTTFILFLFIGLITNAQAADFHVKRYGARANGNSDDSQAIMKAWKDACSSTK 60

Query: 61  ASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTI 120
            SK+VI GGRYVV+SMKF+GPC+APIH+Q+EGRL+AP NI+ M++D +WI+F+YIN LT+
Sbjct: 61  PSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLTL 120

Query: 121 SGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNC 180
           SGKG FDGRGSLAWKQNQCASSGKC SLPISLRFYSLNN++I+ ITSTDSKFFH+NVHNC
Sbjct: 121 SGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFYSLNNSLIKDITSTDSKFFHVNVHNC 180

Query: 181 RNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTC 240
           RN+TLQNI I+APG SPNTDGIHIGGSSGVTI NA+I+TGDDCVSIGDGSQQI VEKVTC
Sbjct: 181 RNLTLQNINIDAPGDSPNTDGIHIGGSSGVTIHNARIKTGDDCVSIGDGSQQIKVEKVTC 240

Query: 241 GPGHGISIGSLGKYKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVM 300
           GPGHGISIGSLGKYKNEKPVSG+ VR+CTI NTMFGVRIK+WP ST GIA+NM F+SIVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKSWPASTKGIASNMQFESIVM 300

Query: 301 KNVGTPILIDQQYCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNV 360
            NVGTPILIDQQYCPYG C  +IPSRV IS+VGF+NI GTSTT+VAVKLVCSRGYPCKNV
Sbjct: 301 NNVGTPILIDQQYCPYGTCNRQIPSRVQISNVGFKNIRGTSTTQVAVKLVCSRGYPCKNV 360

Query: 361 KLSNINLRYIGTNGTAISECSNVKPTISGRVMPPPCTRAFA 402
           KLSNINL+Y GTNGTAISECSNVKP I+G V+PP CTRAFA
Sbjct: 361 KLSNINLKYSGTNGTAISECSNVKPAIAGSVVPPACTRAFA 401

[Close]
BLAST of CmoCh19G008940 vs. NCBI nr
Match: gi|659124341|ref|XP_008462107.1| (PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo])

HSP 1 Score: 672.5 bits (1734), Expect = 4.4e-190
Identity = 322/402 (80.10%), Postives = 364/402 (90.55%), Query Frame = 1 

Query: 1   MSSLTI-STSSTFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSR 60
           MSS TI S S+TFI+F F+ LITN  A DFHVKRYGA+ANGNSDDSQAIM+AWKDAC S 
Sbjct: 1   MSSSTIFSRSTTFILFLFIGLITNVQAVDFHVKRYGARANGNSDDSQAIMKAWKDACSST 60

Query: 61  KASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALT 120
           K SK+VI GGRYVV+SMKF+GPC+APIH+Q+EGRL+AP NI+ M++D +WI+F+YIN LT
Sbjct: 61  KPSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLT 120

Query: 121 ISGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHN 180
           +SGKG FDGRGSLAWKQNQCASSGKC SLPISLRF+SLNN++I+ ITSTDSKFFHMNVHN
Sbjct: 121 VSGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFFSLNNSLIKDITSTDSKFFHMNVHN 180

Query: 181 CRNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVT 240
           CRN+TL+NI I+APG SPNTDGIHIGGSSG+TI +A+I+TGDDCVSIGDGSQQI VEKVT
Sbjct: 181 CRNVTLRNINIDAPGDSPNTDGIHIGGSSGITIHDARIKTGDDCVSIGDGSQQINVEKVT 240

Query: 241 CGPGHGISIGSLGKYKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIV 300
           CGPGHGISIGSLGKYKNEKPVSG+ VR+CTI NTMFGVRIKTWP ST GIA+NM F++IV
Sbjct: 241 CGPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKTWPASTKGIASNMQFENIV 300

Query: 301 MKNVGTPILIDQQYCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKN 360
           M NVGTPILIDQQYCPYG C  ++PSRV ISDVGF+NI GTSTT+VAVKLVCSRGYPCKN
Sbjct: 301 MDNVGTPILIDQQYCPYGTCHHQVPSRVQISDVGFKNIRGTSTTQVAVKLVCSRGYPCKN 360

Query: 361 VKLSNINLRYIGTNGTAISECSNVKPTISGRVMPPPCTRAFA 402
           VKLSNINL+Y GTNGTAISECSNVKP + GRV+PP CTRAFA
Sbjct: 361 VKLSNINLKYSGTNGTAISECSNVKPAVVGRVVPPACTRAFA 402

[Close]
BLAST of CmoCh19G008940 vs. NCBI nr
Match: gi|700188203|gb|KGN43436.1| (Polygalacturonase [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 8.2e-152
Identity = 259/319 (81.19%), Postives = 291/319 (91.22%), Query Frame = 1 

Query: 1   MSSLTISTSSTFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRK 60
           MSS TIS S+TFI+F F+ LITN  AADFHVKRYGA+ANGNSDDSQAIM+AWKDAC S K
Sbjct: 1   MSSSTISRSTTFILFLFIGLITNAQAADFHVKRYGARANGNSDDSQAIMKAWKDACSSTK 60

Query: 61  ASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTI 120
            SK+VI GGRYVV+SMKF+GPC+APIH+Q+EGRL+AP NI+ M++D +WI+F+YIN LT+
Sbjct: 61  PSKIVIPGGRYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLTL 120

Query: 121 SGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNC 180
           SGKG FDGRGSLAWKQNQCASSGKC SLPISLRFYSLNN++I+ ITSTDSKFFH+NVHNC
Sbjct: 121 SGKGTFDGRGSLAWKQNQCASSGKCGSLPISLRFYSLNNSLIKDITSTDSKFFHVNVHNC 180

Query: 181 RNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTC 240
           RN+TLQNI I+APG SPNTDGIHIGGSSGVTI NA+I+TGDDCVSIGDGSQQI VEKVTC
Sbjct: 181 RNLTLQNINIDAPGDSPNTDGIHIGGSSGVTIHNARIKTGDDCVSIGDGSQQIKVEKVTC 240

Query: 241 GPGHGISIGSLGKYKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVM 300
           GPGHGISIGSLGKYKNEKPVSG+ VR+CTI NTMFGVRIK+WP ST GIA+NM F+SIVM
Sbjct: 241 GPGHGISIGSLGKYKNEKPVSGITVRDCTITNTMFGVRIKSWPASTKGIASNMQFESIVM 300

Query: 301 KNVGTPILIDQQYCPYGKC 320
            NVGTPILIDQQYCPYG C
Sbjct: 301 NNVGTPILIDQQYCPYGTC 319

[Close]
BLAST of CmoCh19G008940 vs. NCBI nr
Match: gi|645286904|ref|XP_008245681.1| (PREDICTED: exopolygalacturonase clone GBGA483-like [Prunus mume])

HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-136
Identity = 229/391 (58.57%), Postives = 306/391 (78.26%), Query Frame = 1 

Query: 16  FFLCLITNGL---AADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGGRYV 75
           FFL LI+  +   AADF +K+YGAKA+G +DDSQAI RAWK+AC S   S V+I+ G Y+
Sbjct: 11  FFLFLISFSIKARAADFDIKKYGAKADGKTDDSQAINRAWKEACASTTPSTVLIAKGNYM 70

Query: 76  VNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGRGSL 135
              +KF+GPC AP+ I++EG L+AP   + +KS D W++F  I+ LT+SG G FDG+GS+
Sbjct: 71  AGPVKFQGPCKAPVSIRVEGTLQAPAEPEKLKSQDGWVVFRNIDGLTVSGGGTFDGQGSI 130

Query: 136 AWKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNIIINA 195
           AW +N CA +GKC+SLPI++RF  L N+ I+ ITS++SK FH+NV NC+N+TLQ++II A
Sbjct: 131 AWSKNDCAKTGKCNSLPINIRFSGLTNSHIQNITSSNSKLFHINVLNCKNVTLQHVIITA 190

Query: 196 PGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIGSLG 255
           PG S NTDGIHIG SS + I+ A+I+TGDDC+S+GDGSQQI +EKV CGPGHGISIGSLG
Sbjct: 191 PGESLNTDGIHIGRSSNINITGAEIKTGDDCISLGDGSQQINIEKVKCGPGHGISIGSLG 250

Query: 256 KYKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGT-PILIDQ 315
           +Y +E+PV+GV VRNCTI NT  GVR+KTWP S  G+A+++HF+ I+M+NV T P+LIDQ
Sbjct: 251 RYHDEQPVTGVTVRNCTISNTSNGVRVKTWPASPNGVASDLHFEDIIMENVKTSPVLIDQ 310

Query: 316 QYCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLRYIG 375
           +YCP G+C+ KIPS+V IS+V F+NI GTS   V VKL CS+G PC+NV++S+I+L Y G
Sbjct: 311 EYCPNGQCQAKIPSKVKISNVSFKNIRGTSADPVVVKLACSKGIPCQNVQISDIHLTYNG 370

Query: 376 TNGTAISECSNVKPTISGRVMPPPCTRAFAI 403
            NG A S C+NVKPT++G++ PP C +  A+
Sbjct: 371 KNGAATSVCTNVKPTMTGQIFPPACAKTAAL 401

[Close]
BLAST of CmoCh19G008940 vs. NCBI nr
Match: gi|658013829|ref|XP_008342227.1| (PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica])

HSP 1 Score: 494.2 bits (1271), Expect = 2.2e-136
Identity = 232/389 (59.64%), Postives = 303/389 (77.89%), Query Frame = 1 

Query: 10  STFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRKASKVVISGG 69
           +TF +F  + L     AAD  +K++GAKA+G +DDSQAI  AWK+AC S   S VVI+ G
Sbjct: 9   ATFFLFL-VALFIKAKAADIDIKKFGAKADGKTDDSQAINSAWKEACTSATPSTVVIAKG 68

Query: 70  RYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTISGKGIFDGR 129
            Y+V  +KF+GPC AP+ +++EG L+AP   + +KS D W+IF+ I+AL++SG G FDG+
Sbjct: 69  NYMVGPVKFQGPCKAPVSLRVEGTLQAPAEPEKLKSQDGWVIFQNIDALSVSGGGTFDGQ 128

Query: 130 GSLAWKQNQCASSGKCDSLPISLRFYSLNNTVIRGITSTDSKFFHMNVHNCRNMTLQNII 189
           GS+AW +N CA +GKC+SLPISLR   L N  I+ ITST+SK FHMN+ NC+N+TLQ++ 
Sbjct: 129 GSIAWSKNDCAKTGKCNSLPISLRLTGLTNAHIQDITSTNSKLFHMNILNCKNVTLQHVT 188

Query: 190 INAPGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSQQITVEKVTCGPGHGISIG 249
           I APG S NTDGIHIG S+ + I+ A+I+TGDDCVSIGDGSQQI +EKVTCGPGHGISIG
Sbjct: 189 IKAPGESLNTDGIHIGRSTNINITGAEIQTGDDCVSIGDGSQQINIEKVTCGPGHGISIG 248

Query: 250 SLGKYKNEKPVSGVLVRNCTIKNTMFGVRIKTWPDSTLGIATNMHFDSIVMKNVGT-PIL 309
           SLG+Y +E+PV GV VRNCTIKNT  GVR+KTWP S  G+A+++HF+ I+M+NV T P+L
Sbjct: 249 SLGRYHDEQPVRGVTVRNCTIKNTSNGVRVKTWPASPNGVASDLHFEDIIMENVTTSPVL 308

Query: 310 IDQQYCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNVKLSNINLR 369
           IDQ+YCP G+C+ K+PSRV IS+V F+NI GTS   VAVKL CS+G PC+NV++S+INL 
Sbjct: 309 IDQEYCPNGQCQAKMPSRVKISNVSFKNIRGTSADPVAVKLACSKGIPCQNVEISDINLT 368

Query: 370 YIGTNGTAISECSNVKPTISGRVMPPPCT 398
             G NGT  S CSNV PT++G+V+PP C+
Sbjct: 369 CNGKNGTCTSVCSNVNPTVTGKVIPPACS 396

The following BLAST results are available for this feature:
BLAST of CmoCh19G008940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR2_ARATH1.5e-12156.00Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=... [more]
PGLR2_PLAAC3.2e-10850.82Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1[more]
PGLR_OENOR2.3e-10650.00Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1[more]
PGLR_GOSHI9.8e-10548.50Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1[more]
PGLR_GOSBA1.4e-10347.96Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1[more]
BLAST of CmoCh19G008940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6I9_CUCSA5.7e-15281.19Polygalacturonase OS=Cucumis sativus GN=Csa_7G033440 PE=3 SV=1[more]
A0A161ZUB4_DAUCA1.2e-13356.84Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021113 PE=4 SV=1[more]
D9ZHD7_HYPPE2.7e-12555.56Polygalacturonase OS=Hypericum perforatum GN=PG PE=3 SV=1[more]
D7L721_ARALL3.3e-12356.99Exopolygalacturonase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478122 PE... [more]
D7MX60_ARALL9.5e-12356.72Polygalacturonase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_497387 PE=3 ... [more]
BLAST of CmoCh19G008940 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G14040.14.5e-12456.18 Pectin lyase-like superfamily protein[more]
AT3G07850.18.5e-12356.00 Pectin lyase-like superfamily protein[more]
AT3G07820.18.2e-10245.95 Pectin lyase-like superfamily protein[more]
AT5G48140.15.3e-10145.05 Pectin lyase-like superfamily protein[more]
AT3G07840.12.0e-10045.19 Pectin lyase-like superfamily protein[more]
BLAST of CmoCh19G008940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453736|ref|XP_004144612.1|2.1e-19281.30PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis sativus][more]
gi|659124341|ref|XP_008462107.1|4.4e-19080.10PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo][more]
gi|700188203|gb|KGN43436.1|8.2e-15281.19Polygalacturonase [Cucumis sativus][more]
gi|645286904|ref|XP_008245681.1|1.3e-13658.57PREDICTED: exopolygalacturonase clone GBGA483-like [Prunus mume][more]
gi|658013829|ref|XP_008342227.1|2.2e-13659.64PREDICTED: exopolygalacturonase clone GBGA483-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR006626PbH1
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G008940.1CmoCh19G008940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 56..386
score: 1.1
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 237..250
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 357..379
score: 2100.0coord: 207..228
score: 100.0coord: 230..250
score: 6300.0coord: 260..281
score: 1.3coord: 180..206
score:
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 16..397
score: 2.69E
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 15..397
score: 4.4E
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 29..397
score: 3.9E
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 29..397
score: 3.9E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G008940Melon (DHL92) v3.6.1cmomedB513
CmoCh19G008940Melon (DHL92) v3.6.1cmomedB521
CmoCh19G008940Silver-seed gourdcarcmoB0286
CmoCh19G008940Silver-seed gourdcarcmoB0471
CmoCh19G008940Silver-seed gourdcarcmoB1091
CmoCh19G008940Silver-seed gourdcarcmoB1430
CmoCh19G008940Cucumber (Chinese Long) v3cmocucB0617
CmoCh19G008940Cucumber (Chinese Long) v3cmocucB0622
CmoCh19G008940Watermelon (97103) v2cmowmbB511
CmoCh19G008940Watermelon (97103) v2cmowmbB512
CmoCh19G008940Wax gourdcmowgoB0653
CmoCh19G008940Wax gourdcmowgoB0663
CmoCh19G008940Cucurbita moschata (Rifu)cmocmoB108
CmoCh19G008940Cucurbita moschata (Rifu)cmocmoB381
CmoCh19G008940Cucumber (Gy14) v1cgycmoB0294
CmoCh19G008940Cucurbita maxima (Rimu)cmacmoB145
CmoCh19G008940Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G008940Cucurbita maxima (Rimu)cmacmoB549
CmoCh19G008940Wild cucumber (PI 183967)cmocpiB520
CmoCh19G008940Wild cucumber (PI 183967)cmocpiB524
CmoCh19G008940Cucumber (Chinese Long) v2cmocuB518
CmoCh19G008940Melon (DHL92) v3.5.1cmomeB443
CmoCh19G008940Melon (DHL92) v3.5.1cmomeB452
CmoCh19G008940Watermelon (Charleston Gray)cmowcgB459
CmoCh19G008940Watermelon (97103) v1cmowmB496
CmoCh19G008940Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G008940Cucurbita pepo (Zucchini)cmocpeB483
CmoCh19G008940Cucurbita pepo (Zucchini)cmocpeB492
CmoCh19G008940Bottle gourd (USVL1VR-Ls)cmolsiB452
CmoCh19G008940Bottle gourd (USVL1VR-Ls)cmolsiB457
CmoCh19G008940Cucumber (Gy14) v2cgybcmoB763
CmoCh19G008940Cucumber (Gy14) v2cgybcmoB927