CmoCh19G007280 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G007280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr19 : 7542842 .. 7544360 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGCCTACCCACACCAACCGAGATGGAAGCTCGCAATCCCTCCCTAATCCCACACGACTTCGATCCTTCCAGTGGAGAACTAGATCATGGTATTGAACATGGCATACCAATGCCAAGGACAGCTAAAGATTCAAATGCAGAAGTATCCATTCCAGTACTTGACACAGTAAGGTCATACGGATTTTGTAAATGCCTCAATAATTAGAACTAATGATATGAGTTGTAGCTGCGGTTGTACATTATACTTTCAAAAAGTTCTCAAAGTTCATGGAGTGATAGTGATGCCATTGAATAGGCATCGCCAACCTGGTTGAACTGGACATCATCCTATCTCTAAAAAGTGATAGTTAAGATATTTTCGCACCTAGTTCGTCACAGTTTCTACTTTTCTAAATCCGCGTAACGAACGACACCAGCATTTATTATATGTCCTGGAAGCATAAATTCTTGATGATGCTTATGAAAATCCACTATCAAAGCATTTAGTAGCGGGGTTCCTAAAGTGTTCAAAGGACCATTAAATCAATAGAAAGAACAAAATTTCACACTCGAGCATCAAACTCTTGCAAAAAGTTTCGATAATGAGTACTATTCATGACTCTTCATGGAGATACTGTCTGCAGATGCATAATTTAGCTGGGTCACTGTTTTCTTCAAACTGAGGGACCCTTGAGTGAACCAAATGAACCCACAAAGACTGGTTGGCTAGTTGGCAGGGGATTAAAAAAAACAAATACAAACCCGAAAAAGCAAGAACCTAAAGAAGCAGTCCAAGTTCAGTGCTTAAGCAAGTAAACTAAAAATGGAGCTTAAATATTTTCTTTAATTGAAGACATACTACATGTTGCCAAGAACATGCCCAACATCAATAATTTAGTGCTTTTTTTTGCATTAGAGGCTCAAGGATTCACAAGTTGCCATTCCTTTTTCTATTTTCCGTTTCTACCATTTGTGCAAGCAAATGGTAGGCCATTGTGTTTTGCACTAAACAAGGCAAACCATGTGAGATATTGCCAATTTCTTCACCTGCTATGTTTTTCCCCCCTCTTCTTACCTTTCTACTTATCCATGACAAAAATTCTATATATAAATACATAAACACTCACTCAGTGACTCAAAGCTCACTAACAAGTACCATAACAAGTCCTTTCAAATCCAGTTCAAAAGGCAATTCAAAAACAGGGCCTCTTCTTTCTTCTAATCCTACAGAGATGGGAATCCATTTGACAGGAATAGCAAACGCAAAGCAAAAGCTACAGAGAACACTTTCGGAGAAATACGGGATTGGATCGGCAGTCACGAATGTTCCTAAAGGGCATTTCGCAGTGTACGTAGGAGAAACTAGGAAGAAGAGATTTGTTATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTGGCGGAAGAGGAATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGACTACTTCATCAGCTTAACTTCATCCCTAAATTGTTCATAA

mRNA sequence

ATGGACTGCCTACCCACACCAACCGAGATGGAAGCTCGCAATCCCTCCCTAATCCCACACGACTTCGATCCTTCCAGTGGAGAACTAGATCATGGTATTGAACATGGCATACCAATGCCAAGGACAGCTAAAGATTCAAATGCAGAAGTATCCATTCCAGTACTTGACACAGTAAGTTCAAAAGGCAATTCAAAAACAGGGCCTCTTCTTTCTTCTAATCCTACAGAGATGGGAATCCATTTGACAGGAATAGCAAACGCAAAGCAAAAGCTACAGAGAACACTTTCGGAGAAATACGGGATTGGATCGGCAGTCACGAATGTTCCTAAAGGGCATTTCGCAGTGTACGTAGGAGAAACTAGGAAGAAGAGATTTGTTATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTGGCGGAAGAGGAATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGACTACTTCATCAGCTTAACTTCATCCCTAAATTGTTCATAA

Coding sequence (CDS)

ATGGACTGCCTACCCACACCAACCGAGATGGAAGCTCGCAATCCCTCCCTAATCCCACACGACTTCGATCCTTCCAGTGGAGAACTAGATCATGGTATTGAACATGGCATACCAATGCCAAGGACAGCTAAAGATTCAAATGCAGAAGTATCCATTCCAGTACTTGACACAGTAAGTTCAAAAGGCAATTCAAAAACAGGGCCTCTTCTTTCTTCTAATCCTACAGAGATGGGAATCCATTTGACAGGAATAGCAAACGCAAAGCAAAAGCTACAGAGAACACTTTCGGAGAAATACGGGATTGGATCGGCAGTCACGAATGTTCCTAAAGGGCATTTCGCAGTGTACGTAGGAGAAACTAGGAAGAAGAGATTTGTTATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTGGCGGAAGAGGAATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGACTACTTCATCAGCTTAACTTCATCCCTAAATTGTTCATAA

Homology

[Close]

BLAST of CmoCh19G007280 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPL 136
           MG  L GI       ++TLS +    S V + PKG+ AVYVGE  K RFVIP+S+LN PL
Sbjct: 1   MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGENMK-RFVIPVSHLNQPL 60

Query: 137 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN 175
           F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS L+
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of CmoCh19G007280 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-23
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 92  QRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFD 151
           ++ LS   G GSA    PKG  AVYVGE++KKR+++P+SYLN P F+ LL+ +EEEFGFD
Sbjct: 11  KKILSRSTGAGSAA---PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 152 HPMGGLTIPCSEDYFISLTSSL 174
           HPMGGLTIPC ED FI++TS L
Sbjct: 71  HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007280 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 56/98 (57.14%), Postives = 64/98 (65.31%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPL 136
           MG  L GI  A               S   + PKG+ AVYVGE + KRFVIP+SYLN P 
Sbjct: 1   MGFRLPGIRKA---------------SKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 60

Query: 137 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN 175
           F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS LN
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of CmoCh19G007280 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-22
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPL 136
           MG  L GI        +  S+          VPKG+  VYVG+ + +RF+IP+SYLN P 
Sbjct: 1   MGFRLPGIRKTSIAANQASSKS-------VEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 60

Query: 137 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN 175
           F+DLLN AEEEFG+DHPMGGLTIPC ED F+++TS LN
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

[Close]

BLAST of CmoCh19G007280 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-22
Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1


Query: 103 SAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCS 162
           +AV+  PKG  AVYVGE++KKR+++P+SYLN P F+ LL+ +EEEFGFDHPMGGLTIPC 
Sbjct: 19  AAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCP 78

Query: 163 EDYFISLTSSLN 175
           ED FI++TS L+
Sbjct: 79  EDTFINVTSRLH 90

[Close]

BLAST of CmoCh19G007280 vs. TrEMBL
Match: A0A0A0K174_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009140 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.4e-46
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGIHLTGIANAKQKLQRT S KYGIGSAVT  NVPKGHFAVYVGET+KKRFV+PI YLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTS+LNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of CmoCh19G007280 vs. TrEMBL
Match: A0A0D2N5V5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G251000 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-37
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPL 136
           MGI LTG+A AKQKLQRTLS + G     TNVPKGH AVYVGE+ KKRFVIPI+YLNHPL
Sbjct: 1   MGIQLTGLAQAKQKLQRTLSGRLGN----TNVPKGHIAVYVGESNKKRFVIPIAYLNHPL 60

Query: 137 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           F+DLLN  EEEFGF+HPMGGLTIPCSE+YFISLT+SLNCS
Sbjct: 61  FQDLLNKVEEEFGFNHPMGGLTIPCSEEYFISLTTSLNCS 96

[Close]

BLAST of CmoCh19G007280 vs. TrEMBL
Match: A0A067DMI5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040912mg PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-37
Identity = 77/102 (75.49%), Postives = 87/102 (85.29%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKY--GIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGI L G A+AKQKLQRTLS K    + +   NVPKGH A+YVGE  +KRFVIPISYLNH
Sbjct: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLF+DLLN+AEEEFGFDHPMGGLTIPCSE+YF+SLTS+LNCS
Sbjct: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102

[Close]

BLAST of CmoCh19G007280 vs. TrEMBL
Match: V4SDA6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030043mg PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-37
Identity = 77/102 (75.49%), Postives = 87/102 (85.29%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKY--GIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGI L G A+AKQKLQRTLS K    + +   NVPKGH A+YVGE  +KRFVIPISYLNH
Sbjct: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLF+DLLN+AEEEFGFDHPMGGLTIPCSE+YF+SLTS+LNCS
Sbjct: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102

[Close]

BLAST of CmoCh19G007280 vs. TrEMBL
Match: A0A061DYM5_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006733 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-37
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT-NVPKGHFAVYVGETRKKRFVIPISYLNHP 136
           MGI LTG+A+AKQKLQRTLS + G   A T NVPKGH AVYVGE  +KRFVIPI+YLNHP
Sbjct: 1   MGIQLTGLAHAKQKLQRTLSGRIGNALAATSNVPKGHIAVYVGEGNRKRFVIPITYLNHP 60

Query: 137 LFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           LF+DLLN AEEEFGF+HPMGGLTIPCSE+YFISLT+ LNCS
Sbjct: 61  LFQDLLNRAEEEFGFNHPMGGLTIPCSEEYFISLTTLLNCS 101

[Close]

BLAST of CmoCh19G007280 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 6.5e-35
Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYG---IGSAVTNVPKGHFAVYVGET-RKKRFVIPISYL 136
           MGI L G++ AKQKLQR+LS +       S   NVPKGH AVYVGET  +KRFVIPISYL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 137 NHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           NHPLF+ LLNLAEEEFGFDHPMGGLTIPC+EDYF +L S L+ S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of CmoCh19G007280 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-25
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 1


Query: 84  IANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNL 143
           + ++KQ L++         S+  +VPKG+ AVYVGE   KRFV+P+SYL+ P F+DLL  
Sbjct: 9   LQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRK 68

Query: 144 AEEEFGFDHPMGGLTIPCSEDYFISLTSSLN 175
           AEEEFGFDHPMGGLTIPCSE+ FI L S  N
Sbjct: 69  AEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmoCh19G007280 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-24
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGET-RKKRFVIPISYLNHP 136
           M I ++ +  + ++L ++LS      S    +PKGH AVYVGE  +K+RFV+P++YL+HP
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHS----SNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHP 60

Query: 137 LFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
            F+ LL  AEEEFGFDHPMGGLTIPC+E  FI L S L+ S
Sbjct: 61  CFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh19G007280 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 92  QRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFD 151
           ++ LS   G GSA    PKG  AVYVGE++KKR+++P+SYLN P F+ LL+ +EEEFGFD
Sbjct: 11  KKILSRSTGAGSAA---PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 152 HPMGGLTIPCSEDYFISLTSSL 174
           HPMGGLTIPC ED FI++TS L
Sbjct: 71  HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007280 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 3.9e-24
Identity = 55/102 (53.92%), Postives = 69/102 (67.65%), Query Frame = 1


Query: 77  MGIHLTGIANAKQ---KLQRTLSEKYGIGSAVTNVPKGHFAVYVGET---RKKRFVIPIS 136
           MG+    I+NA +   KL    +      S+  +VPKGH AVYVGE     KKRFV+PIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 137 YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSS 173
           +LNHP FK+ L+ AEEEFGF+HPMGGLTIPC E+ F+ L +S
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIAS 102

[Close]

BLAST of CmoCh19G007280 vs. NCBI nr
Match: gi|778722863|ref|XP_011658585.1| (PREDICTED: auxin-induced protein 15A [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 3.4e-46
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGIHLTGIANAKQKLQRT S KYGIGSAVT  NVPKGHFAVYVGET+KKRFV+PI YLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTS+LNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of CmoCh19G007280 vs. NCBI nr
Match: gi|659094328|ref|XP_008448001.1| (PREDICTED: auxin-induced protein 15A [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGIHLTGIANAKQKLQRT S KYGIGSAVT  NVPKGHFAVYVGET+KKRFVIPI YLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTS+LNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of CmoCh19G007280 vs. NCBI nr
Match: gi|694353712|ref|XP_009358224.1| (PREDICTED: auxin-induced protein 15A-like [Pyrus x bretschneideri])

HSP 1 Score: 169.1 bits (427), Expect = 7.0e-39
Identity = 83/102 (81.37%), Postives = 87/102 (85.29%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIG--SAVTNVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGI L GIA+AKQKLQRTLS +YG    S  T VPKGHFAVYVGE  KKRFVIPISYLNH
Sbjct: 1   MGIKLMGIAHAKQKLQRTLSARYGSAADSTSTEVPKGHFAVYVGEDEKKRFVIPISYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLF+DLLN AEEEFG+DHP GGLTIPCSEDYFISLTS LNCS
Sbjct: 61  PLFQDLLNKAEEEFGYDHPTGGLTIPCSEDYFISLTSCLNCS 102

[Close]

BLAST of CmoCh19G007280 vs. NCBI nr
Match: gi|658049775|ref|XP_008360591.1| (PREDICTED: auxin-induced protein 15A-like [Malus domestica])

HSP 1 Score: 166.0 bits (419), Expect = 5.9e-38
Identity = 80/102 (78.43%), Postives = 87/102 (85.29%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGS--AVTNVPKGHFAVYVGETRKKRFVIPISYLNH 136
           MGI L GIA+AKQKLQRTLS +YG  +    T VPKGHFAVYVGE  KKRFVIPISYLNH
Sbjct: 1   MGIKLMGIAHAKQKLQRTLSARYGSAADNTSTEVPKGHFAVYVGEDEKKRFVIPISYLNH 60

Query: 137 PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           PLF+DLLN AEEEFG+DHP GGLTIPCSEDYF+SL+S LNCS
Sbjct: 61  PLFQDLLNKAEEEFGYDHPTGGLTIPCSEDYFVSLSSCLNCS 102

[Close]

BLAST of CmoCh19G007280 vs. NCBI nr
Match: gi|823161135|ref|XP_012480433.1| (PREDICTED: auxin-induced protein 15A-like [Gossypium raimondii])

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 79/100 (79.00%), Postives = 87/100 (87.00%), Query Frame = 1


Query: 77  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPL 136
           MGI LTG+A AKQKLQRTLS + G     TNVPKGH AVYVGE+ KKRFVIPI+YLNHPL
Sbjct: 1   MGIQLTGLAQAKQKLQRTLSGRLGN----TNVPKGHIAVYVGESNKKRFVIPIAYLNHPL 60

Query: 137 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 177
           F+DLLN  EEEFGF+HPMGGLTIPCSE+YFISLT+SLNCS
Sbjct: 61  FQDLLNKVEEEFGFNHPMGGLTIPCSEEYFISLTTSLNCS 96

The following BLAST results are available for this feature:

BLAST of CmoCh19G007280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARG7_VIGRR	2.2e-24	59.18	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
SAU24_ARATH	5.4e-23	62.20	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
AX15A_SOYBN	1.6e-22	57.14	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]
AX10A_SOYBN	2.7e-22	53.06	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]
SAU23_ARATH	3.5e-22	65.28	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmoCh19G007280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K174_CUCSA	2.4e-46	91.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009140 PE=4 SV=1	[more]
A0A0D2N5V5_GOSRA	1.6e-37	79.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G251000 PE=4 SV=1	[more]
A0A067DMI5_CITSI	2.0e-37	75.49	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040912mg PE=4 SV=1	[more]
V4SDA6_9ROSI	2.0e-37	75.49	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030043mg PE=4 SV=1	[more]
A0A061DYM5_THECC	2.7e-37	78.22	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006733 PE=4 ...	[more]

BLAST of CmoCh19G007280 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34770.1	6.5e-35	70.19	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	6.1e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.3e-24	52.48	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	3.0e-24	62.20	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	3.9e-24	53.92	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh19G007280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722863\|ref\|XP_011658585.1\|	3.4e-46	91.18	PREDICTED: auxin-induced protein 15A [Cucumis sativus]	[more]
gi\|659094328\|ref\|XP_008448001.1\|	1.3e-45	91.18	PREDICTED: auxin-induced protein 15A [Cucumis melo]	[more]
gi\|694353712\|ref\|XP_009358224.1\|	7.0e-39	81.37	PREDICTED: auxin-induced protein 15A-like [Pyrus x bretschneideri]	[more]
gi\|658049775\|ref\|XP_008360591.1\|	5.9e-38	78.43	PREDICTED: auxin-induced protein 15A-like [Malus domestica]	[more]
gi\|823161135\|ref\|XP_012480433.1\|	2.2e-37	79.00	PREDICTED: auxin-induced protein 15A-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G007280.1	CmoCh19G007280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 95..172 score: 3.2
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 78..176 score: 8.3
None	No IPR available	PANTHER	PTHR31929:SF10	SUBFAMILY NOT NAMED	coord: 78..176 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G007280	Csa7G009140	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G007280	CSPI07G00690	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G007280	Lsi11G011730	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G007280	CsaV3_7G000710	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G007280	Cla97C02G031220	Watermelon (97103) v2	cmowmbB512

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G007280	Cucumber (Chinese Long) v3	cmocucB0594
CmoCh19G007280	Wax gourd	cmowgoB0653
CmoCh19G007280	Wax gourd	cmowgoB0665
CmoCh19G007280	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh19G007280	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh19G007280	Cucumber (Gy14) v1	cgycmoB1050
CmoCh19G007280	Cucurbita maxima (Rimu)	cmacmoB145
CmoCh19G007280	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G007280	Cucurbita maxima (Rimu)	cmacmoB548
CmoCh19G007280	Cucurbita maxima (Rimu)	cmacmoB599
CmoCh19G007280	Wild cucumber (PI 183967)	cmocpiB500
CmoCh19G007280	Melon (DHL92) v3.5.1	cmomeB453
CmoCh19G007280	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G007280	Watermelon (97103) v1	cmowmB496
CmoCh19G007280	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G007280	Cucurbita pepo (Zucchini)	cmocpeB484
CmoCh19G007280	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G007280	Cucurbita pepo (Zucchini)	cmocpeB499
CmoCh19G007280	Bottle gourd (USVL1VR-Ls)	cmolsiB451
CmoCh19G007280	Cucumber (Gy14) v2	cgybcmoB202
CmoCh19G007280	Cucumber (Gy14) v2	cgybcmoB205
CmoCh19G007280	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G007280	Melon (DHL92) v3.6.1	cmomedB512
CmoCh19G007280	Melon (DHL92) v3.6.1	cmomedB522
CmoCh19G007280	Melon (DHL92) v3.6.1	cmomedB527
CmoCh19G007280	Silver-seed gourd	carcmoB0433
CmoCh19G007280	Silver-seed gourd	carcmoB1316
CmoCh19G007280	Silver-seed gourd	carcmoB1368