CmoCh19G006690 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGACTCGTGTTCATCAATTTCTTCTTACTTATTTTGGTAATTAATTACCAATTCCATTCGTCTTCCCCCACTCTAACCCCATTTCGTATTGAATTTAAGTTATTTTCGTATACTCAAATATGTTTTGATTTCGGTTTTTTTGTGGTGAATTTAGCTTGCAAACACTATAGAATCGAGGCACGAGCCAGGAGATCATCACTGGAGAAATTTCATCGACAACAAGTTGTTGCATGAAGACATTGAAGAATTTATCCATTCTGATCCAAACTCACTTCTTTCTGAAAAAGAAACAGAAGATTGTACTGAAACTTTGAAGATTGAAGATGGAAAGCTTTTCGTCAAAAATCTCGAGCCTCGACCACAAGCCACATTTGACTCGGATGTCGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTATGGACATAGAACCCCGACCAAGCGCATCATTTTATCCCGACGACACCAAAAAAGAGTTTATTGCTGAAGAAATAGAGCCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGACGATACCAAGAAAAAGTTTGTCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTATGGACATAGAACCCCGACCAAGCGCATCATTTTATCCCGGATGTTGTCAAAACTAA ATGAAGGGACTCGTGTTCATCAATTTCTTCTTACTTATTTTGCTTGCAAACACTATAGAATCGAGGCACGAGCCAGGAGATCATCACTGGAGAAATTTCATCGACAACAAGTTGTTGCATGAAGACATTGAAGAATTTATCCATTCTGATCCAAACTCACTTCTTTCTGAAAAAGAAACAGAAGATTGTACTGAAACTTTGAAGATTGAAGATGGAAAGCTTTTCGTCAAAAATCTCGAGCCTCGACCACAAGCCACATTTGACTCGGATGTCGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTATGGACATAGAACCCCGACCAAGCGCATCATTTTATCCCGACGACACCAAAAAAGAGTTTATTGCTGAAGAAATAGAGCCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGACGATACCAAGAAAAAGTTTGTCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTATGGACATAGAACCCCGACCAAGCGCATCATTTTATCCCGGATGTTGTCAAAACTAA ATGAAGGGACTCGTGTTCATCAATTTCTTCTTACTTATTTTGCTTGCAAACACTATAGAATCGAGGCACGAGCCAGGAGATCATCACTGGAGAAATTTCATCGACAACAAGTTGTTGCATGAAGACATTGAAGAATTTATCCATTCTGATCCAAACTCACTTCTTTCTGAAAAAGAAACAGAAGATTGTACTGAAACTTTGAAGATTGAAGATGGAAAGCTTTTCGTCAAAAATCTCGAGCCTCGACCACAAGCCACATTTGACTCGGATGTCGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTATGGACATAGAACCCCGACCAAGCGCATCATTTTATCCCGACGACACCAAAAAAGAGTTTATTGCTGAAGAAATAGAGCCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGACGATACCAAGAAAAAGTTTGTCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTATGGACATAGAACCCCGACCAAGCGCATCATTTTATCCCGGATGTTGTCAAAACTAA
BLAST of CmoCh19G006690 vs. Swiss-Prot
Match: OSS2_PEA (Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = 1
BLAST of CmoCh19G006690 vs. TrEMBL
Match: A0A0A0K5Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.4e-59 Identity = 130/262 (49.62%), Postives = 158/262 (60.31%), Query Frame = 1
BLAST of CmoCh19G006690 vs. TrEMBL
Match: A0A0A0K3R4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 7.1e-51 Identity = 119/230 (51.74%), Postives = 153/230 (66.52%), Query Frame = 1
BLAST of CmoCh19G006690 vs. TrEMBL
Match: A0A0A0K958_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50 Identity = 115/221 (52.04%), Postives = 144/221 (65.16%), Query Frame = 1
BLAST of CmoCh19G006690 vs. TrEMBL
Match: A0A164VLH6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022110 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26 Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 1
BLAST of CmoCh19G006690 vs. TrEMBL
Match: A0A164VLK0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022107 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26 Identity = 80/171 (46.78%), Postives = 100/171 (58.48%), Query Frame = 1
BLAST of CmoCh19G006690 vs. NCBI nr
Match: gi|778726203|ref|XP_004151481.2| (PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus]) HSP 1 Score: 236.9 bits (603), Expect = 3.5e-59 Identity = 130/262 (49.62%), Postives = 158/262 (60.31%), Query Frame = 1
BLAST of CmoCh19G006690 vs. NCBI nr
Match: gi|778726210|ref|XP_011659075.1| (PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 1.0e-50 Identity = 119/230 (51.74%), Postives = 153/230 (66.52%), Query Frame = 1
BLAST of CmoCh19G006690 vs. NCBI nr
Match: gi|700189107|gb|KGN44340.1| (hypothetical protein Csa_7G262890 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 1.0e-50 Identity = 119/230 (51.74%), Postives = 153/230 (66.52%), Query Frame = 1
BLAST of CmoCh19G006690 vs. NCBI nr
Match: gi|778726206|ref|XP_011659073.1| (PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 1.0e-50 Identity = 119/230 (51.74%), Postives = 153/230 (66.52%), Query Frame = 1
BLAST of CmoCh19G006690 vs. NCBI nr
Match: gi|700189108|gb|KGN44341.1| (hypothetical protein Csa_7G262900 [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 1.7e-50 Identity = 115/221 (52.04%), Postives = 144/221 (65.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |