CmoCh19G006460 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCAAATCTTCCAAAAAGCTTAGCCGAAGATTAATTTGCTCGACGGCGGAAGGGTTCTTGAGATATCTACTCGAATCCCCGTCGTTTGATTTAATTTTCCAAAGATAAACACTTCTTTCTTCCAGACGACTGAGATTTTGGAGAATTTGAGTGAAATCGTTAGGTAGGAGCTACAATGGAGGAAGAGAAGAAGCCACTGAGGGCGGCGACGGAGCCTCCTACCAGCCAAGTTCAAGAGATTGAAGAAGAAAGCGGCGTAAAAGAAGAAGCGCCTTCAAAAAGTAGCGGAGGAGGAGGAGGCGGCTGGGGAGGTTGGGGATTCTCTGCGTTTTCTGTTCTCTCAGATCTCCAGAAGGCCGCCGAAGAGATCTCCCGAAATGTATGTGTATTGTATCTGTTTTCATTACGAGTTCAACGTTTTTTGAGTTTCGCGGTTTGGAATTTCTCATGTTCTGTTATCATGTGGCGGTTTCGCTTCTAATTGAGAGGTTTAAGTACTTTATCTGATTATTAATCTATATTGTGTTCTGTATTGAGGAAATGCTGTTCGTTTTCTGGCATTTTGGCAGCGGTACTGAAATTAGCAATATAAACGATTATGTTTTGGTGTTCATAGTGCAGCAAGGAGCCTTTGATTACCAGCATGTTAATGAAATACCCAATGTTCGATAACTGCCTTTATTAGAATGCTGTCATGGGATCCTTGTTGGATGATGAAAGTCCCGGCTAATTTGGGGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCTAATGATATGAGACCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTATTCGTTTAACTTGATATCAGAGCCATGCCCTAAACTTAGTTGTGCCAATAGATTGGTAAATCCTCAAATATCGAACAAAGAACTCCAAAAGAAAAGGAGTCAAGCTTCCTCGAAGGCAGGAAAAAATGACAAAGACTCCAAAGGAGTCGAGCTTCGATTAAGGGGAGGTGCACTTTGTTTGAGGAGAGGTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAAGTGGGGAATACTAACTCTATTGGTATGAGGCCTTTTGGGGATGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAAATATCATACCATTGTGGAGAGTCGTGTTCGTCTGACAATCCTTTTTATTTTTGTTGTTATTTATGGTGGAGAACCAATTTTCTATAATAGCCTGTTGAATTTTCTGCGTCCTAAGCAGGGGAAACAATTATCTTATTTTGATGTTTTCTACTGAAGGAGCAAAATATTGGTCACTTACCCTTTTTTTCTGTTTCGTGTGTGTGTGAACAATTGCAGGCTGCTTCCGTTGCACAGACCGCAGCTAAAAGCCTCGTAGACTTGAAAAATGAAGATGAGGATGTGGAGCCTTCCAAGGAGAAAGAAGTAGAAGATTCTGCAGCTGAAAGTGAAAGTGAAGATGAGAATGATAAGCTGCGAAAATCTGCCTTGAATAAATTAGAGAAGGCCAGCGAGGATTCAGTTTTTGGCCAGGCAAGTTGTTTGAGAACAGGGTTACATAATACATAATCTTGTCGTTGATGGATGTCGATCTTGCATTTTCTGTGAATGCTACAATAACTGTATGTGATTTTTCTCTTGCACCCATATTCGTAAGAACAAAGTGGAATTGATGTTAACAACAGTGCGAAAGTCCTCGTAGTTCACTTGCGCACAAACAAAAAGACTCAATACCAAATTGGAGTCGATTCAAGGAAAAGTTAGAGACTAATGTGTTTGATGTCTTGTTTTCCATCCTCAAAGGGTTCCATGATCATATCACACAAGCTAGGTAGCCATGTCATAAATGGCTCAACCCAGCTCCATTTTTTCTAGGTTTTTCCTACATAGAATTTCTTGCTGTCTTCTAGCTTCTAATATCATGTCATGCTTTCTCAAGCCTTCTTTGAAATTTTGTTTTCATTTAATTTCAATATTCCTTTTCTATTTTCCTTACACGCCTACGTTTTATGCTGAGTGTAGATATAGAGAGTAACTGTGAATTAACTCAGTAGTTAATGATTATACTAGTGATTATAAACGAATGCATTGACGATTGTGCATTGTCAGTAAATGACTTTGTGGCACTTGATCCCGATGTGAATAGCTCTCGCAATCTATTCAGGTCTTGAAATTAAGAATTTGGGTTGCCAACTGTCAGTCATCTCTCGTTTCAATATTGCAGGGCTTAAAGGTTCTGGACACTTCTGTGGAGAATATAGCTTCGGGAGCATGGAAAGCCCTGGGAAGTGCATTGAGGGGAGGCAGTGATTTTGTTCACAAGTATGTCTATCTTGTTTAATAGTAGTTTGAAGTTTAAACACATTAGACAACTTAGAAAATGTTTTTCTTCGACGACCATATAATGCCGTATACAGCTTTCCCAGGCTTTGCCCTGAATGGAAAAGGCATATAACTTTGAATTTTTTAAAGTTGTAATGGATTAATTTCTTGGGTTTGATTTGTTTATGACAAAAAGTGAAAGTTCGAATCATGGATATGCCTCTACTGCACTAACACTCCATCATGTCATTGCTTTGTAATTCTTTTCCTTCTTCCCTTTTAATTTTAATGTCCAAGGAAGTAATATTCTATAGTTCCTTAGGCTTGAGAATTCAGCTGCAAATATTGCAGAAACCATTCAACATCAAGGAATACCAGCAGCAGCTGGTTCTGTTGCACCAGCATTGTTGGAGGTGTGTATTCCTTATCGTTTTTCTTATCGATTTTTTTAGTAGGAAATTATTATAATTTCCTTGATGGTAGGGTATCAATAAAAAACTTAGCAGGCAGAGAGGTGGTCCAGCTACAAGGGCTGTTAAGAACAAGTCTAATGGGATTAATCTAACTACTTAAAATTTTCCCGTCTCAAACAATGCTCATTCTTAATTTATCAATTGATACGTTGACTACTTGTAAAATAGTAGCATGAATTTAAAGTATAGTTCATCGGCAAACTGAACTTATAGCATCATGATTCATAGGTCCAGAGTTCTATTTATATTACTATTGAATAAACATTTTTCTCTACTTAGACATTTCTTGAATCATTAGGCTATAGAGAGTAACATGGTTAAGACATTATACTATCAACCTTAAGGTTAGATGTTCAAATCCCTAAAAAAACCATTAAACTCACATAGGAATAGGATAAGATTTTGGAAGCAAAAAATTGTTTATTTATCTTAAGAAAGAAAGAGAAAATAAAGCCTTTGATTTATTCTTTTCCCCTGTAGGCCAAAGTACAAGTAATATAAAAGTTAGCTTAGCTAAATAAGTGCATGTTATAACATAACCAAAGAGAAGCTTCAAAAATCATTTTCCTCCCTTTACACTCACTATCATAATTTTTGTTCATAAAAAATTTTCTATTTTCTCCAATTAAATCTCCCGAGAAATAGCTAAACCGAATTCTCTTAAATCTTGTGCTCTATGATTTTCCATATGATCTGAGATTTTATTTGTTACAGAAAGGGAAGGCTCTCACAACAAAGGGAATGGAAGTTCTTGAGCTTGTTGGAAGGGAAACCATGGATTTACTGATTACAGAGACTGGCATTGAAGTTGAGAAGACCTCTAACGAAGGCGAACCACAAGCCAAGGAGGATCAATTAGAAGACGATGAAGTGACATTTGATCGCTGCTTTTATATATATGGAGGTCCAGAACAGTTAGAGGTCACTTTCTAATCTAGGAAGTTGAATTGTTATATTAGGATGCTACTCTATCAAATCATTACAGTTTCTTTTTTGCAGGAGTTGGAGGCCCTGTCCAACCACTATACTTTATTATATAACCGAAGGAAAGGAAAATTATCTCAGGACCAGAAATCTATGTATGATGGAAAGCTTAAACAGGTCCAACAAGTTTTCAGTTTGAGTAATGAAATGGAAGGAAACAGTTTAACATTAGAAAAAGGTAAAAAGTTGGAAGTTGGAGAAGAGGGAAATGATGAGATGAAGAGTTTATATGATTCTAGTGTCAGCAAGGCTGCTGAAATGGCCGCAGGGTAAAATTTTCCTTGAAATGCTTATGCTGAATTCTTGTTTCACATTGATTGTACTGAATGAAGTTCATGTTGCACTCGTGTCGTGTGCAATGCCTTGATGCTTTTTCGTCACTTGCAGGTTTGGAAGTTCCATAACCGAACTCGCTGTTCCTGAAATAATGCAAAGGACTGTCGACAGATTAGAATCGCTCCATTCGGAAGGAGTCCATGTGAGGGATATACACTTCATTTTTATTTTCTTTTAAAGTATATGGGACTGTTAGTAAGCATTCCAGCTGACATTATATTTGCATTTGCAGAGACTCTCAGAAATGTGTTATTTTGCTGTGTCTCAATTGCTGATGCTTGGAAAATCCATTATAACAAATGCTAACAAAGTTGAGGATGACGATGACGTAAAAATCCAATGGCCCGAAGATTCTGTTGAAAAAGCTGAAATCATTAGATTAAAGGCTCTATACATGACAGGATATATAGATTCACTATCCAATAGCTTCATTACAGGTCGGCCTTCTTTTCATCATCCTTTTTAATTCTGATATTACTATCCCTTCTATTTTGCTAATATGACATAATCTTTCTCGACTAATTCTCATTATATTCTGCTCTTATTTTGCTTTTTCAACTTGCCTTTCATATTAATTCTAGTCTGGCTTGATTAGTATACACAATCTGAATCTCGATTGCTCTGTTCAGGCCTTTCGGACGTGTCGAAAGCGTATCAAGCTGCCATGAGCGCTGCTCCAGCCAATTCTCTCAAAGGTCCTCTGCAAACATCAGTACAAGACAAGGCCGATGCCTTCTCCGAGCATCTTCGTGCCGATCAAACCACAGCTTTCTGCAAAATCCAGGACGGGCTTCAATACTTGTCGTATCTTGTTCTCTCAACCTCAATGCCATCTGCTTGAAGAATCAGAGACCACCCCAAAACATAAACGTGAGCACTTCCTCCCCTAGTTTTGCTGTAAATAGTTGCAAGCCAGATTGAGTTTGATCCCTCCATGCTTACCTTGAGCTTTGTGCAGCGGTATCGGCATGGAAACTCATGAATTTGGAGCAAAGGTTTTTTCTATTTGATCCAAGTTTGCTGGTATGTTTTTAAGATCTTTAGTTTAGCAACTCTTTCAATATTATTGTGGAAGATTGTCATGGGAAATCAAAACAATCATTACAGGTCTGCCTTGTTTAAAATACATCAAAAAATGAAATTAATGCTTCTAACTTTAGGGTTACTAAATTCATTTTAGAATTGTGATAGAGTTACAGTGTCTACCAAGAAAAAAACGGATCTGTTTATGTCGGTTCTGACCTGAACTCAACATTGAACCAGCAACGTTTCGATGTTGAAAATAGTTTCAAATGTTTCATCGTACTTTGTTTCATTTCATCTCATTTCATCGCACTCTTTAAATGTCAAATTTTAGTCTTTCTACTTTCAATAAATCTTAAAAATAGTCTGGAG TACCAAATCTTCCAAAAAGCTTAGCCGAAGATTAATTTGCTCGACGGCGGAAGGGTTCTTGAGATATCTACTCGAATCCCCGTCGTTTGATTTAATTTTCCAAAGATAAACACTTCTTTCTTCCAGACGACTGAGATTTTGGAGAATTTGAGTGAAATCGTTAGGTAGGAGCTACAATGGAGGAAGAGAAGAAGCCACTGAGGGCGGCGACGGAGCCTCCTACCAGCCAAGTTCAAGAGATTGAAGAAGAAAGCGGCGTAAAAGAAGAAGCGCCTTCAAAAAGTAGCGGAGGAGGAGGAGGCGGCTGGGGAGGTTGGGGATTCTCTGCGTTTTCTGTTCTCTCAGATCTCCAGAAGGCCGCCGAAGAGATCTCCCGAAATGCTGCTTCCGTTGCACAGACCGCAGCTAAAAGCCTCGTAGACTTGAAAAATGAAGATGAGGATGTGGAGCCTTCCAAGGAGAAAGAAGTAGAAGATTCTGCAGCTGAAAGTGAAAGTGAAGATGAGAATGATAAGCTGCGAAAATCTGCCTTGAATAAATTAGAGAAGGCCAGCGAGGATTCAGTTTTTGGCCAGGGCTTAAAGGTTCTGGACACTTCTGTGGAGAATATAGCTTCGGGAGCATGGAAAGCCCTGGGAAGTGCATTGAGGGGAGGCAGTGATTTTGTTCACAAGCTTGAGAATTCAGCTGCAAATATTGCAGAAACCATTCAACATCAAGGAATACCAGCAGCAGCTGGTTCTGTTGCACCAGCATTGTTGGAGAAAGGGAAGGCTCTCACAACAAAGGGAATGGAAGTTCTTGAGCTTGTTGGAAGGGAAACCATGGATTTACTGATTACAGAGACTGGCATTGAAGTTGAGAAGACCTCTAACGAAGGCGAACCACAAGCCAAGGAGGATCAATTAGAAGACGATGAAGTGACATTTGATCGCTGCTTTTATATATATGGAGGTCCAGAACAGTTAGAGGAGTTGGAGGCCCTGTCCAACCACTATACTTTATTATATAACCGAAGGAAAGGAAAATTATCTCAGGACCAGAAATCTATGTATGATGGAAAGCTTAAACAGGTCCAACAAGTTTTCAGTTTGAGTAATGAAATGGAAGGAAACAGTTTAACATTAGAAAAAGGTAAAAAGTTGGAAGTTGGAGAAGAGGGAAATGATGAGATGAAGAGTTTATATGATTCTAGTGTCAGCAAGGCTGCTGAAATGGCCGCAGGGTTTGGAAGTTCCATAACCGAACTCGCTGTTCCTGAAATAATGCAAAGGACTGTCGACAGATTAGAATCGCTCCATTCGGAAGGAGTCCATAGACTCTCAGAAATGTGTTATTTTGCTGTGTCTCAATTGCTGATGCTTGGAAAATCCATTATAACAAATGCTAACAAAGTTGAGGATGACGATGACGTAAAAATCCAATGGCCCGAAGATTCTGTTGAAAAAGCTGAAATCATTAGATTAAAGGCTCTATACATGACAGGATATATAGATTCACTATCCAATAGCTTCATTACAGGCCTTTCGGACGTGTCGAAAGCGTATCAAGCTGCCATGAGCGCTGCTCCAGCCAATTCTCTCAAAGGTCCTCTGCAAACATCAGTACAAGACAAGGCCGATGCCTTCTCCGAGCATCTTCGTGCCGATCAAACCACAGCTTTCTGCAAAATCCAGGACGGGCTTCAATACTTGTCGTATCTTGTTCTCTCAACCTCAATGCCATCTGCTTGAAGAATCAGAGACCACCCCAAAACATAAACCGGTATCGGCATGGAAACTCATGAATTTGGAGCAAAGGTTTTTTCTATTTGATCCAAGTTTGCTGGTATGTTTTTAAGATCTTTAGTTTAGCAACTCTTTCAATATTATTGTGGAAGATTGTCATGGGAAATCAAAACAATCATTACAGGTCTGCCTTGTTTAAAATACATCAAAAAATGAAATTAATGCTTCTAACTTTAGGGTTACTAAATTCATTTTAGAATTGTGATAGAGTTACAGTGTCTACCAAGAAAAAAACGGATCTGTTTATGTCGGTTCTGACCTGAACTCAACATTGAACCAGCAACGTTTCGATGTTGAAAATAGTTTCAAATGTTTCATCGTACTTTGTTTCATTTCATCTCATTTCATCGCACTCTTTAAATGTCAAATTTTAGTCTTTCTACTTTCAATAAATCTTAAAAATAGTCTGGAG ATGGAGGAAGAGAAGAAGCCACTGAGGGCGGCGACGGAGCCTCCTACCAGCCAAGTTCAAGAGATTGAAGAAGAAAGCGGCGTAAAAGAAGAAGCGCCTTCAAAAAGTAGCGGAGGAGGAGGAGGCGGCTGGGGAGGTTGGGGATTCTCTGCGTTTTCTGTTCTCTCAGATCTCCAGAAGGCCGCCGAAGAGATCTCCCGAAATGCTGCTTCCGTTGCACAGACCGCAGCTAAAAGCCTCGTAGACTTGAAAAATGAAGATGAGGATGTGGAGCCTTCCAAGGAGAAAGAAGTAGAAGATTCTGCAGCTGAAAGTGAAAGTGAAGATGAGAATGATAAGCTGCGAAAATCTGCCTTGAATAAATTAGAGAAGGCCAGCGAGGATTCAGTTTTTGGCCAGGGCTTAAAGGTTCTGGACACTTCTGTGGAGAATATAGCTTCGGGAGCATGGAAAGCCCTGGGAAGTGCATTGAGGGGAGGCAGTGATTTTGTTCACAAGCTTGAGAATTCAGCTGCAAATATTGCAGAAACCATTCAACATCAAGGAATACCAGCAGCAGCTGGTTCTGTTGCACCAGCATTGTTGGAGAAAGGGAAGGCTCTCACAACAAAGGGAATGGAAGTTCTTGAGCTTGTTGGAAGGGAAACCATGGATTTACTGATTACAGAGACTGGCATTGAAGTTGAGAAGACCTCTAACGAAGGCGAACCACAAGCCAAGGAGGATCAATTAGAAGACGATGAAGTGACATTTGATCGCTGCTTTTATATATATGGAGGTCCAGAACAGTTAGAGGAGTTGGAGGCCCTGTCCAACCACTATACTTTATTATATAACCGAAGGAAAGGAAAATTATCTCAGGACCAGAAATCTATGTATGATGGAAAGCTTAAACAGGTCCAACAAGTTTTCAGTTTGAGTAATGAAATGGAAGGAAACAGTTTAACATTAGAAAAAGGTAAAAAGTTGGAAGTTGGAGAAGAGGGAAATGATGAGATGAAGAGTTTATATGATTCTAGTGTCAGCAAGGCTGCTGAAATGGCCGCAGGGTTTGGAAGTTCCATAACCGAACTCGCTGTTCCTGAAATAATGCAAAGGACTGTCGACAGATTAGAATCGCTCCATTCGGAAGGAGTCCATAGACTCTCAGAAATGTGTTATTTTGCTGTGTCTCAATTGCTGATGCTTGGAAAATCCATTATAACAAATGCTAACAAAGTTGAGGATGACGATGACGTAAAAATCCAATGGCCCGAAGATTCTGTTGAAAAAGCTGAAATCATTAGATTAAAGGCTCTATACATGACAGGATATATAGATTCACTATCCAATAGCTTCATTACAGGCCTTTCGGACGTGTCGAAAGCGTATCAAGCTGCCATGAGCGCTGCTCCAGCCAATTCTCTCAAAGGTCCTCTGCAAACATCAGTACAAGACAAGGCCGATGCCTTCTCCGAGCATCTTCGTGCCGATCAAACCACAGCTTTCTGCAAAATCCAGGACGGGCTTCAATACTTGTCGTATCTTGTTCTCTCAACCTCAATGCCATCTGCTTGA
BLAST of CmoCh19G006460 vs. TrEMBL
Match: A0A0A0K6Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075000 PE=4 SV=1) HSP 1 Score: 833.6 bits (2152), Expect = 1.3e-238 Identity = 461/526 (87.64%), Postives = 483/526 (91.83%), Query Frame = 1
BLAST of CmoCh19G006460 vs. TrEMBL
Match: D7TPS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01360 PE=4 SV=1) HSP 1 Score: 604.7 bits (1558), Expect = 1.0e-169 Identity = 343/510 (67.25%), Postives = 412/510 (80.78%), Query Frame = 1
BLAST of CmoCh19G006460 vs. TrEMBL
Match: B9RZI4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939550 PE=4 SV=1) HSP 1 Score: 601.7 bits (1550), Expect = 8.6e-169 Identity = 345/525 (65.71%), Postives = 414/525 (78.86%), Query Frame = 1
BLAST of CmoCh19G006460 vs. TrEMBL
Match: A0A061E1J2_THECC (BAT2 domain-containing protein 1 OS=Theobroma cacao GN=TCM_006982 PE=4 SV=1) HSP 1 Score: 595.9 bits (1535), Expect = 4.7e-167 Identity = 342/535 (63.93%), Postives = 420/535 (78.50%), Query Frame = 1
BLAST of CmoCh19G006460 vs. TrEMBL
Match: B9HRV4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s11110g PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 3.5e-162 Identity = 333/507 (65.68%), Postives = 401/507 (79.09%), Query Frame = 1
BLAST of CmoCh19G006460 vs. TAIR10
Match: AT2G15860.2 (AT2G15860.2 unknown protein) HSP 1 Score: 521.5 bits (1342), Expect = 5.7e-148 Identity = 312/537 (58.10%), Postives = 397/537 (73.93%), Query Frame = 1
BLAST of CmoCh19G006460 vs. NCBI nr
Match: gi|659109817|ref|XP_008454897.1| (PREDICTED: uncharacterized protein LOC103495203 [Cucumis melo]) HSP 1 Score: 868.6 bits (2243), Expect = 5.4e-249 Identity = 470/522 (90.04%), Postives = 492/522 (94.25%), Query Frame = 1
BLAST of CmoCh19G006460 vs. NCBI nr
Match: gi|778725249|ref|XP_011658925.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222694 [Cucumis sativus]) HSP 1 Score: 847.8 bits (2189), Expect = 9.9e-243 Identity = 465/526 (88.40%), Postives = 487/526 (92.59%), Query Frame = 1
BLAST of CmoCh19G006460 vs. NCBI nr
Match: gi|700188734|gb|KGN43967.1| (hypothetical protein Csa_7G075000 [Cucumis sativus]) HSP 1 Score: 833.6 bits (2152), Expect = 1.9e-238 Identity = 461/526 (87.64%), Postives = 483/526 (91.83%), Query Frame = 1
BLAST of CmoCh19G006460 vs. NCBI nr
Match: gi|1009115573|ref|XP_015874300.1| (PREDICTED: uncharacterized protein LOC107411270 [Ziziphus jujuba]) HSP 1 Score: 618.6 bits (1594), Expect = 9.8e-174 Identity = 348/526 (66.16%), Postives = 426/526 (80.99%), Query Frame = 1
BLAST of CmoCh19G006460 vs. NCBI nr
Match: gi|225428661|ref|XP_002284886.1| (PREDICTED: uncharacterized protein LOC100262433 [Vitis vinifera]) HSP 1 Score: 604.7 bits (1558), Expect = 1.5e-169 Identity = 343/510 (67.25%), Postives = 412/510 (80.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|