CmoCh19G006080 (gene) Cucurbita moschata (Rifu)

NameCmoCh19G006080
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr19 : 6722861 .. 6724613 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTACTGAAGAAATAAGAACATTCCTTCTCCGATCTCTGTCCCGGCAGCCCCAAAATGCAGTTTCCAGAGACATCGAGGATTTTCCTTCCGATCAAGCTCCGGCAAACGGGGCCGACTTGGGTCAAGAAGTTGTTGTAAAGGGTGAAGTTTTGGAGGTTCGGTAACTTGCAGACCGCCTCCGGAACAGTGCCGTATAGGCGGTTGTTGGCGAAGTTGAGAACCTCCATTTTGGCCAAGCAGGCAAAGGAGTATGGGATCGGGCCGGTGAGGGTGTTCTTGCTCGCGTCGAAGAGAATGGTGTTTTCTAATTGCCCGATCTCCATCGGTAAGCAGCCGGAGAGCTTGTTGTCGGAGAAGAGGACCTCGATTAGGGTTTTCCTTGTCTTTCCGGTTCCGATGCTTCTTGGGATTTCGCCGGTGAACTCGTTGCTCGTGAACGTCAGGTACCTTCGGGCAAAAAAAAAAAAAAAGTTACTTTCCAAATACCCAATTTTTGTAGTGGAAGCTGAAATAAGATTTATAGCACTTACGCAGCCACAAATAGAAATTAAACAAAGAGGCATAAAGATTTACGTGGTGGTACCCAATTACTATAACTTAAGTGTATTTCTCACCGTTTCACCCTTTAAAGTCTCTCTTACCAAATTCCTCTCAATTGTCTCTAGACAAATACAAAATGACAATGATTCTCCACCTCAAAACAATGCTAGACAAGTGTTTATACAGATATAACAATCAAAGCAATATTACTGCTCATATATGAATTAAGATGATTCATAAACTAAGTAAACCGAAATTATGAACAAAATAAATGAGAGTTATGAACTAAAATAAATGACAATACATGCGTCGTATATGTACGATCCTATTCTTCATGACAACTTACATCAGTCAGATAAACCATTCTCGTCCAATAATTAAAAATGAAAAAAAGCGAAAAGTTCGAGGTAATATGGTACCGAGCAGGCGTGTTGCCGAGGTTAGCCGGGATGCTCTGATTAAACTTATTATTGTTGAGGAAGATGGCCGCGATAATGTCCATATCAAAGAGCCTTGGATTGACCGGACCGCAATAGTAATTAAATCGGAGGTCCAAAAACGTGAGATTGACGGCGCCGAGGACTTCATCAGGGAACGACCCCTTAAATTTATTGTTGCTAAGATCGAGCTCGTACAAGAACTTGACCATGGCAATGAGTTTGGGTATGGTGCCAAAGAAAAAGTTGGAATTGGCATGGAAGTATGCGATGTCCGACAACTTGTCGGCCAGCCCATCGAGGGTGAGCTTAGAGCCACTAAAGTTGAAATTATTGAAGCTAAGCCCCGACACCGCCCTCTTGTTTTCAGCATCCGGATATTTGTCGCACCTAAATCCTTTGTAGCTGCAAACATCGGTCCCATTCCATGTAGCTATGACATTCAATGGGTCGTTCTCGATTCTACTTTTGTAGTTTTGAATCACTCTATAAGCAATTTCGATTCTCTTGCTCTCGAATCTTAGTGTCGGTAGCTTTGCTGGACTTCGTTTCGGTGAACGATGTTTCGGAGAGGTCGCTGGTGCTGGCTTCGATGGTAATGGCGGAGGTGGAGATGGAGGCCGTGGTGGAGGAGGAGAAGGAGGAGGAGGAGAAGTGTTACAATCGGGAGATGTCGATGGCGGAGGAGAGTTGCTGCCACCGCCAATGCCGATGCCGATGCCGATGTCGAGGGCGAGGGCGGAAAAGGAAGAGAAGAGGAGGAGATTAA

mRNA sequence

ATGAACCTTACTGAAGAAATAAGAACATTCCTTCTCCGATCTCTGTCCCGGCAGCCCCAAAATGCAGTTTCCAGAGACATCGAGGATTTTCCTTCCGATCAAGCTCCGGCAAACGGGGCCGACTTGGGTCAAGAAGTTGTTGTAAAGGGTGAAGTTTTGGAGACCGCCTCCGGAACAGTGCCGTATAGGCGGTTGTTGGCGAAGTTGAGAACCTCCATTTTGGCCAAGCAGGCAAAGGAGTATGGGATCGGGCCGGTGAGGGTGTTCTTGCTCGCGTCGAAGAGAATGGTGTTTTCTAATTGCCCGATCTCCATCGGTAAGCAGCCGGAGAGCTTGTTGTCGGAGAAGAGGACCTCGATTAGGGTTTTCCTTGTCTTTCCGGTTCCGATGCTTCTTGGGATTTCGCCGGTGAACTCGCGTGTTGCCGAGGTTAGCCGGGATGCTCTGATTAAACTTATTATTGTTGAGGAAGATGGCCGCGATAATGTCCATATCAAAGAGCCTTGGATTGACCGGACCGCAATAGTAATTAAATCGGAGGTCCAAAAACGTGAGATTGACGGCGCCGAGGACTTCATCAGGGAACGACCCCTTAAATTTATTGTTGCTAAGATCGAGCTCGTACAAGAACTTGACCATGGCAATGAGTTTGGGTATGGTGCCAAAGAAAAAGTTGGAATTGGCATGGAAGTATGCGATGTCCGACAACTTGTCGGCCAGCCCATCGAGGGTGAGCTTAGAGCCACTAAAGTTGAAATTATTGAAGCTAAGCCCCGACACCGCCCTCTTGTTTTCAGCATCCGGATATTTGTCGCACCTAAATCCTTTGTAGCTGCAAACATCGGTCCCATTCCATGTAGCTATGACATTCAATGGGTCGTTCTCGATTCTACTTTTCAATTTCGATTCTCTTGCTCTCGAATCTTAGTGTCGGTAGCTTTGCTGGACTTCGTTTCGGTGAACGATGTTTCGGAGAGGTCGCTGGTGCTGGCTTCGATGGTAATGGCGGAGGTGGAGATGGAGGCCGTGGTGGAGGAGGAGAAGGAGGAGGAGGAGAAGTGTTACAATCGGGAGATGTCGATGGCGGAGGAGAGTTGCTGCCACCGCCAATGCCGATGCCGATGCCGATGTCGAGGGCGAGGGCGGAAAAGGAAGAGAAGAGGAGGAGATTAA

Coding sequence (CDS)

ATGAACCTTACTGAAGAAATAAGAACATTCCTTCTCCGATCTCTGTCCCGGCAGCCCCAAAATGCAGTTTCCAGAGACATCGAGGATTTTCCTTCCGATCAAGCTCCGGCAAACGGGGCCGACTTGGGTCAAGAAGTTGTTGTAAAGGGTGAAGTTTTGGAGACCGCCTCCGGAACAGTGCCGTATAGGCGGTTGTTGGCGAAGTTGAGAACCTCCATTTTGGCCAAGCAGGCAAAGGAGTATGGGATCGGGCCGGTGAGGGTGTTCTTGCTCGCGTCGAAGAGAATGGTGTTTTCTAATTGCCCGATCTCCATCGGTAAGCAGCCGGAGAGCTTGTTGTCGGAGAAGAGGACCTCGATTAGGGTTTTCCTTGTCTTTCCGGTTCCGATGCTTCTTGGGATTTCGCCGGTGAACTCGCGTGTTGCCGAGGTTAGCCGGGATGCTCTGATTAAACTTATTATTGTTGAGGAAGATGGCCGCGATAATGTCCATATCAAAGAGCCTTGGATTGACCGGACCGCAATAGTAATTAAATCGGAGGTCCAAAAACGTGAGATTGACGGCGCCGAGGACTTCATCAGGGAACGACCCCTTAAATTTATTGTTGCTAAGATCGAGCTCGTACAAGAACTTGACCATGGCAATGAGTTTGGGTATGGTGCCAAAGAAAAAGTTGGAATTGGCATGGAAGTATGCGATGTCCGACAACTTGTCGGCCAGCCCATCGAGGGTGAGCTTAGAGCCACTAAAGTTGAAATTATTGAAGCTAAGCCCCGACACCGCCCTCTTGTTTTCAGCATCCGGATATTTGTCGCACCTAAATCCTTTGTAGCTGCAAACATCGGTCCCATTCCATGTAGCTATGACATTCAATGGGTCGTTCTCGATTCTACTTTTCAATTTCGATTCTCTTGCTCTCGAATCTTAGTGTCGGTAGCTTTGCTGGACTTCGTTTCGGTGAACGATGTTTCGGAGAGGTCGCTGGTGCTGGCTTCGATGGTAATGGCGGAGGTGGAGATGGAGGCCGTGGTGGAGGAGGAGAAGGAGGAGGAGGAGAAGTGTTACAATCGGGAGATGTCGATGGCGGAGGAGAGTTGCTGCCACCGCCAATGCCGATGCCGATGCCGATGTCGAGGGCGAGGGCGGAAAAGGAAGAGAAGAGGAGGAGATTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G006080.1CmoCh19G006080.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 333..365
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G006080Silver-seed gourdcarcmoB0293
CmoCh19G006080Silver-seed gourdcarcmoB0512
CmoCh19G006080Silver-seed gourdcarcmoB1086
CmoCh19G006080Silver-seed gourdcarcmoB1089
CmoCh19G006080Cucumber (Chinese Long) v3cmocucB0602
CmoCh19G006080Cucumber (Chinese Long) v3cmocucB0611
CmoCh19G006080Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G006080Watermelon (97103) v2cmowmbB502
CmoCh19G006080Watermelon (97103) v2cmowmbB512
CmoCh19G006080Watermelon (97103) v2cmowmbB516
CmoCh19G006080Watermelon (97103) v2cmowmbB519
CmoCh19G006080Watermelon (97103) v2cmowmbB527
CmoCh19G006080Wax gourdcmowgoB0640
CmoCh19G006080Wax gourdcmowgoB0657
CmoCh19G006080Cucurbita moschata (Rifu)cmocmoB110
CmoCh19G006080Cucurbita moschata (Rifu)cmocmoB276
CmoCh19G006080Cucurbita moschata (Rifu)cmocmoB352
CmoCh19G006080Cucurbita moschata (Rifu)cmocmoB395
CmoCh19G006080Cucurbita moschata (Rifu)cmocmoB398
CmoCh19G006080Cucumber (Gy14) v1cgycmoB0627
CmoCh19G006080Cucumber (Gy14) v1cgycmoB0686
CmoCh19G006080Cucurbita maxima (Rimu)cmacmoB718
CmoCh19G006080Cucurbita maxima (Rimu)cmacmoB143
CmoCh19G006080Cucurbita maxima (Rimu)cmacmoB329
CmoCh19G006080Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G006080Cucurbita maxima (Rimu)cmacmoB853
CmoCh19G006080Wild cucumber (PI 183967)cmocpiB510
CmoCh19G006080Wild cucumber (PI 183967)cmocpiB525
CmoCh19G006080Cucumber (Chinese Long) v2cmocuB504
CmoCh19G006080Cucumber (Chinese Long) v2cmocuB519
CmoCh19G006080Melon (DHL92) v3.5.1cmomeB454
CmoCh19G006080Melon (DHL92) v3.5.1cmomeB473
CmoCh19G006080Melon (DHL92) v3.5.1cmomeB477
CmoCh19G006080Watermelon (Charleston Gray)cmowcgB459
CmoCh19G006080Watermelon (Charleston Gray)cmowcgB464
CmoCh19G006080Watermelon (97103) v1cmowmB490
CmoCh19G006080Watermelon (97103) v1cmowmB496
CmoCh19G006080Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G006080Cucurbita pepo (Zucchini)cmocpeB489
CmoCh19G006080Cucurbita pepo (Zucchini)cmocpeB490
CmoCh19G006080Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G006080Bottle gourd (USVL1VR-Ls)cmolsiB460
CmoCh19G006080Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G006080Bottle gourd (USVL1VR-Ls)cmolsiB469
CmoCh19G006080Bottle gourd (USVL1VR-Ls)cmolsiB478
CmoCh19G006080Bottle gourd (USVL1VR-Ls)cmolsiB482
CmoCh19G006080Cucumber (Gy14) v2cgybcmoB352
CmoCh19G006080Cucumber (Gy14) v2cgybcmoB928
CmoCh19G006080Melon (DHL92) v3.6.1cmomedB523
CmoCh19G006080Melon (DHL92) v3.6.1cmomedB526
CmoCh19G006080Melon (DHL92) v3.6.1cmomedB547
CmoCh19G006080Melon (DHL92) v3.6.1cmomedB549
CmoCh19G006080Melon (DHL92) v3.6.1cmomedB553