CmoCh19G005890 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAATAACTTAATATTCTTCTTCCTCTCTCTCCTCCTCCTACAGGCGGTTTCCGCCGTTGATTACACAGTCACCAGCAACGCCGGTGGCACTCCCGGCGGCGACCGCTTCGACACCCAAATTGGAGCGGATTACTGCCGTCAAACACTGATAGAAGCCAGTGGTTTTATCTGGAGCATTTTCCGTCAAAACACCGACGCCGACCGGAAAAATGTGCGGAGTGTCAGCCTGTTGATCGACCGAGATTACGACGGAGTGGCGTTTGCTAGCGACAACCGAATTCACATTAGTGCTAATTACATCGCCCGCATCACCGGGGACGTGAAGAGGGAGGTAACAGGTATAAAACTACGGTTAATTGAACTCAGATCGAGCACGAAAATTCATTTGTTAAGAATAAGAAAAAAAAATGAGATCAAAATTTCAACTTTTATTAATTTTTACCATATTTAAAATCTTAAAAATAATATAAAATATACTAATAATCGAGAAAAAAAAAATTATATATAATATATTTCGTAATTAACTTTATATCTTAAATCAAATTTCTTGTTATTATTACAGGAGTGTTGTATCATGAAATGGTACATGTCTGGCAATGGGATGGAAACCGGGCGGCGCCCGGGTGGCTGATTGAAGGGTTTGCCGATTACATACGACTGAAGGCGGGGTACATTCCGGGGCACTGGGTTCAGCCCGGAGGCGGGAGAAGTTGGGAGGAAGGGTACGACAAGACCGCGAGATTTCTGGACTATTTGGAGACGCGGCGGAGCGGGTTCGTGTCGGAGCTGAATCGGATGCTCAGAAATGGGTACTCTCCGGATTACTTTGTGCAGTTGCAGGGGAAGCCAGTGGCTCAGCTGTGGGCGGAGTACAAGGCGGCGTTTGGGAATTGAAGGATGTGGTGGTTGAGTATTAGAAATAAAGGGAAAGTTTTTAAATTGGAGTAAAAATAAATGGGTTTGTTGCCCTTGTGTGCTTTTAAATTAAGGTAGTTTGTGTAATTTTTATTCGTAAAATGATAACGACTCTAAATTTTTACTTATTCATAGTCACTAC ATGGCTTCCAATAACTTAATATTCTTCTTCCTCTCTCTCCTCCTCCTACAGGCGGTTTCCGCCGTTGATTACACAGTCACCAGCAACGCCGGTGGCACTCCCGGCGGCGACCGCTTCGACACCCAAATTGGAGCGGATTACTGCCGTCAAACACTGATAGAAGCCAGTGGTTTTATCTGGAGCATTTTCCGTCAAAACACCGACGCCGACCGGAAAAATGTGCGGAGTGTCAGCCTGTTGATCGACCGAGATTACGACGGAGTGGCGTTTGCTAGCGACAACCGAATTCACATTAGTGCTAATTACATCGCCCGCATCACCGGGGACGTGAAGAGGGAGGTAACAGGAGTGTTGTATCATGAAATGGTACATGTCTGGCAATGGGATGGAAACCGGGCGGCGCCCGGGTGGCTGATTGAAGGGTTTGCCGATTACATACGACTGAAGGCGGGGTACATTCCGGGGCACTGGGTTCAGCCCGGAGGCGGGAGAAGTTGGGAGGAAGGGTACGACAAGACCGCGAGATTTCTGGACTATTTGGAGACGCGGCGGAGCGGGTTCGTGTCGGAGCTGAATCGGATGCTCAGAAATGGGTACTCTCCGGATTACTTTGTGCAGTTGCAGGGGAAGCCAGTGGCTCAGCTGTGGGCGGAGTACAAGGCGGCGTTTGGGAATTGAAGGATGTGGTGGTTGAGTATTAGAAATAAAGGGAAAGTTTTTAAATTGGAGTAAAAATAAATGGGTTTGTTGCCCTTGTGTGCTTTTAAATTAAGGTAGTTTGTGTAATTTTTATTCGTAAAATGATAACGACTCTAAATTTTTACTTATTCATAGTCACTAC ATGGCTTCCAATAACTTAATATTCTTCTTCCTCTCTCTCCTCCTCCTACAGGCGGTTTCCGCCGTTGATTACACAGTCACCAGCAACGCCGGTGGCACTCCCGGCGGCGACCGCTTCGACACCCAAATTGGAGCGGATTACTGCCGTCAAACACTGATAGAAGCCAGTGGTTTTATCTGGAGCATTTTCCGTCAAAACACCGACGCCGACCGGAAAAATGTGCGGAGTGTCAGCCTGTTGATCGACCGAGATTACGACGGAGTGGCGTTTGCTAGCGACAACCGAATTCACATTAGTGCTAATTACATCGCCCGCATCACCGGGGACGTGAAGAGGGAGGTAACAGGAGTGTTGTATCATGAAATGGTACATGTCTGGCAATGGGATGGAAACCGGGCGGCGCCCGGGTGGCTGATTGAAGGGTTTGCCGATTACATACGACTGAAGGCGGGGTACATTCCGGGGCACTGGGTTCAGCCCGGAGGCGGGAGAAGTTGGGAGGAAGGGTACGACAAGACCGCGAGATTTCTGGACTATTTGGAGACGCGGCGGAGCGGGTTCGTGTCGGAGCTGAATCGGATGCTCAGAAATGGGTACTCTCCGGATTACTTTGTGCAGTTGCAGGGGAAGCCAGTGGCTCAGCTGTGGGCGGAGTACAAGGCGGCGTTTGGGAATTGA
BLAST of CmoCh19G005890 vs. Swiss-Prot
Match: BSP_BOSSE (Basic secretory protease (Fragments) OS=Boswellia serrata PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.4e-07 Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TrEMBL
Match: A0A0A0K7U8_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072780 PE=4 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 5.5e-104 Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86 Identity = 157/227 (69.16%), Postives = 183/227 (80.62%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TrEMBL
Match: A0A0A0K322_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072800 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.1e-83 Identity = 151/230 (65.65%), Postives = 185/230 (80.43%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TrEMBL
Match: M5VHZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021584mg PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 4.4e-77 Identity = 141/224 (62.95%), Postives = 173/224 (77.23%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TrEMBL
Match: I3SK49_MEDTR (Plant basic secretory protein (BSP) family protein OS=Medicago truncatula GN=MTR_1g107215 PE=2 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 7.5e-77 Identity = 134/222 (60.36%), Postives = 167/222 (75.23%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 256.1 bits (653), Expect = 2.0e-68 Identity = 122/220 (55.45%), Postives = 158/220 (71.82%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 234.2 bits (596), Expect = 8.0e-62 Identity = 110/220 (50.00%), Postives = 153/220 (69.55%), Query Frame = 1
BLAST of CmoCh19G005890 vs. TAIR10
Match: AT2G15170.1 (AT2G15170.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09 Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 1
BLAST of CmoCh19G005890 vs. NCBI nr
Match: gi|449438651|ref|XP_004137101.1| (PREDICTED: uncharacterized protein LOC101216297 [Cucumis sativus]) HSP 1 Score: 385.2 bits (988), Expect = 7.9e-104 Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 1
BLAST of CmoCh19G005890 vs. NCBI nr
Match: gi|700188658|gb|KGN43891.1| (NtPRp27-like protein [Cucumis sativus]) HSP 1 Score: 385.2 bits (988), Expect = 7.9e-104 Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 1
BLAST of CmoCh19G005890 vs. NCBI nr
Match: gi|449438369|ref|XP_004136961.1| (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 2.6e-86 Identity = 157/227 (69.16%), Postives = 183/227 (80.62%), Query Frame = 1
BLAST of CmoCh19G005890 vs. NCBI nr
Match: gi|778725010|ref|XP_011658890.1| (PREDICTED: uncharacterized protein LOC105434420 [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 4.5e-83 Identity = 151/230 (65.65%), Postives = 185/230 (80.43%), Query Frame = 1
BLAST of CmoCh19G005890 vs. NCBI nr
Match: gi|700188660|gb|KGN43893.1| (hypothetical protein Csa_7G072800 [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 4.5e-83 Identity = 151/230 (65.65%), Postives = 185/230 (80.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |