CmoCh19G005500 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine-rich venom protein
Location	Cmo_Chr19 : 6333194 .. 6333682 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCAATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAGACTTTGTCAATGCTCACAATGCAGCTCGTGCCCTTGTTGGCGTTGGGCACGTCAAGTGGGACGAAAGGATAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAACATAATTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGTAGCTACAACTTATCAGGTATTGCTGCAGTTTGGATGTGGGTCACCGAGAGGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGGTGTGTGGCCATTAGACTCAAGTGGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTACGTTCATCACTTGCAACTATGATCCACCGGGCAATGTTAGAGGCCAAAGGCCATTCTGA

mRNA sequence

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCAATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAGACTTTGTCAATGCTCACAATGCAGCTCGTGCCCTTGTTGGCGTTGGGCACGTCAAGTGGGACGAAAGGATAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAACATAATTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGTAGCTACAACTTATCAGGTATTGCTGCAGTTTGGATGTGGGTCACCGAGAGGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGACTCAAGTGGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTACGTTCATCACTTGCAACTATGATCCACCGGGCAATGTTAGAGGCCAAAGGCCATTCTGA

Coding sequence (CDS)

ATGGATCTTTTTAAGCTCTCCCTCTTCCTCTTCTATGTCTCGAGCTTTGCAATGCTTCCCTCGTCTCTCGCTCAAGATTCTCCTCAAGACTTTGTCAATGCTCACAATGCAGCTCGTGCCCTTGTTGGCGTTGGGCACGTCAAGTGGGACGAAAGGATAGCTAGATTTGCTCGACAATATGCCAACCAACGTAAACATAATTGTAAGTTGGTGCACTCAGGCGGACCATATGGAGAAAATCTTGCATGGAGTAGCTACAACTTATCAGGTATTGCTGCAGTTTGGATGTGGGTCACCGAGAGGCAATATTACAATCCTCGCACCAATACTTGTGCGGCTGGCAAGACTCAAGTGGTGTGGAGAAAGTCAGTGAGAATTGGATGTGCCAAAGTGAGATGCACAAACAATCGTGGTACGTTCATCACTTGCAACTATGATCCACCGGGCAATGTTAGAGGCCAAAGGCCATTCTGA

Homology

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BLAST of CmoCh19G005500 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-46
Identity = 98/158 (62.03%), Postives = 114/158 (72.15%), Query Frame = 1


Query: 7   SLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKH 66
           S+ L  V +  M+  S+AQ+SPQD+V+AHNAAR+ V VG V WDE +A FARQYA  R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 67  NCKLVHSGGP-YGENLAW-SSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVV 126
           +C+LVHSG P YGENLA+ S + L+G  AV MWV ER  YNP TNTCA GK     TQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 127 WRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           WR SVRIGCA+VRC NN   FITCNY PPGN  GQRP+
Sbjct: 131 WRNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

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BLAST of CmoCh19G005500 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 1


Query: 8   LFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHN 67
           L +F     A++  S AQDSPQD++  HN AR  VGVG ++WDER+A +AR YA Q + N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSV 127
           C+L+HSGGPYGENLAW S +LSG++AV MWV+E+  YN   NTC       TQVVWRKSV
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

Query: 128 RIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           R+GCAKVRC NN GT I+CNYDP GN   ++P+
Sbjct: 130 RLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

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BLAST of CmoCh19G005500 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.6e-45
Identity = 87/137 (63.50%), Postives = 104/137 (75.91%), Query Frame = 1


Query: 24  AQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPYGENLAW 83
           AQDS QD+VNAHN AR+ +GVG ++WDE +A +AR YANQ K +C+LVHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  SSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSVRIGCAKVRCTNNRGTF 143
           S  +LSG+AAV +WV E+  YN  TNTC       TQVVWR SVR+GCAKVRC NN GT 
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGCAKVRC-NNGGTI 145

Query: 144 ITCNYDPPGNVRGQRPF 158
           I+CNYDPPGN   Q+P+
Sbjct: 146 ISCNYDPPGNYANQKPY 161

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BLAST of CmoCh19G005500 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.9e-44
Identity = 89/160 (55.62%), Postives = 111/160 (69.38%), Query Frame = 1


Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQR 64
           KL++ L    + AM+  S AQ+SPQD+V+ HNAAR+ VGVG V W  ++  FA+ YANQR
Sbjct: 5   KLAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KHNCKLVHSGGPYGENLAWSSYNLSGIA--AVWMWVTERQYYNPRTNTCAAGK-----TQ 124
            ++CKL HSGGPYGEN+ W S      A  AV  WV E++ YN  +NTCAAGK     TQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           VVWR S  IGCA+V C NNRG FITCNY+P GN+ GQ+P+
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

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BLAST of CmoCh19G005500 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.4e-44
Identity = 90/160 (56.25%), Postives = 111/160 (69.38%), Query Frame = 1


Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQR 64
           KL + L    S AM+  S AQ+SPQD+V+ HNAARA VGVG V W  ++  FA+ YANQR
Sbjct: 5   KLVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQR 64

Query: 65  KHNCKLVHSGGPYGENLAWSSYNLSGIA--AVWMWVTERQYYNPRTNTCAAGK-----TQ 124
            ++CKL HSGGPYGEN+ W S      A  AV  WV+E++ Y+  +NTCAAGK     TQ
Sbjct: 65  INDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQ 124

Query: 125 VVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           VVWR S  IGCA+V C NNRG FITCNY+P GN+ GQ+P+
Sbjct: 125 VVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

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BLAST of CmoCh19G005500 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.6e-55
Identity = 104/163 (63.80%), Postives = 128/163 (78.53%), Query Frame = 1


Query: 1   MDLFKLSLFLFYV-SSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQ 60
           MDL  LS  LF V S F MLPSSLAQDSPQD+VN+HN ARA VGVG +KWDE++A ++R 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK---- 120
           YAN+R ++C+LVHS GPYGEN+AW S +LSGI AV +WV E+QYYN  +N+CA+GK    
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 -TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
            TQVVW+ S+R+GCAKV+C N  G FI CNYDP GN+ GQRP+
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

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BLAST of CmoCh19G005500 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.6e-55
Identity = 111/164 (67.68%), Postives = 128/164 (78.05%), Query Frame = 1


Query: 1   MDLFKLSLFL--FYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFAR 60
           MD+ KLSL L  F V +F MLPSSLAQDSPQDF++AHN ARA  GV  V+WDE +A FA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK--- 120
           QYANQR ++C LVHSGGPYGEN+AW   +LSG AAV MWV E+++Y+  +NTCAA +   
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 --TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
             TQVVWR SVRIGCAKV CTNN GTFITCNYDPPGN  GQRP+
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

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BLAST of CmoCh19G005500 vs. TrEMBL
Match: V4U9J3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 103/156 (66.03%), Postives = 121/156 (77.56%), Query Frame = 1


Query: 7   SLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKH 66
           SL LF +   A++ SS AQD PQD+VNAHNAARA VGVG V WD+R+A +A+ YAN+RK 
Sbjct: 8   SLPLFCILGLALILSSHAQDLPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANKRKG 67

Query: 67  NCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWR 126
           +C LVHSGGPYGENLAWSS  LSG  AV +WV E+  Y+  +NTCAAGK     TQVVWR
Sbjct: 68  DCNLVHSGGPYGENLAWSSAGLSGTDAVKLWVNEKADYDYNSNTCAAGKVCGHYTQVVWR 127

Query: 127 KSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           KSVRIGCAKV C NN+GTFI CNYDPPGN  G++P+
Sbjct: 128 KSVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of CmoCh19G005500 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.4e-51
Identity = 98/130 (75.38%), Postives = 109/130 (83.85%), Query Frame = 1


Query: 25  QDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPYGENLAWS 84
           QDSP+DFVNAHNAARA VGVG V WDER+A FARQYANQR ++C+LVHSGGPYGEN+AW 
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 85  SYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWRKSVRIGCAKVRCTNNRGT 144
             +LSG AAV MWV E+Q+YN  +NTCAAGK     TQVVWR SVRIGCAKVRCTNNRGT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 145 FITCNYDPPG 150
           FI CNY+P G
Sbjct: 121 FIICNYEPRG 130

[Close]

BLAST of CmoCh19G005500 vs. TrEMBL
Match: A0A0F6RAM4_9ROSI (Pathogenesis-related gene 1-like protein PR1-1 OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.5e-50
Identity = 94/157 (59.87%), Postives = 122/157 (77.71%), Query Frame = 1


Query: 5   KLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQR 64
           K+SL +  +   A L  S AQ++PQD++ AHNAARA V VG ++WD+R+A +A+ YANQR
Sbjct: 3   KISLAILCLIGLATLHLSYAQNTPQDYLRAHNAARAQVRVGPMRWDDRVAAYAKTYANQR 62

Query: 65  KHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK----TQVVW 124
           + +C+LVHSGGPYGEN+AWSS +++G AAV +WV E+  Y+  +NTC  G+    TQVVW
Sbjct: 63  RRDCRLVHSGGPYGENIAWSSGDMTGTAAVKLWVDEKPKYDYNSNTCVGGECRHYTQVVW 122

Query: 125 RKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           RKSVR+GCAKVRC NNRGTFITCNYDPPGN   +RP+
Sbjct: 123 RKSVRLGCAKVRCDNNRGTFITCNYDPPGNFINERPY 159

[Close]

BLAST of CmoCh19G005500 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-47
Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 1


Query: 8   LFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHN 67
           L +F     A++  S AQDSPQD++  HN AR  VGVG ++WDER+A +AR YA Q + N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSV 127
           C+L+HSGGPYGENLAW S +LSG++AV MWV+E+  YN   NTC       TQVVWRKSV
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

Query: 128 RIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           R+GCAKVRC NN GT I+CNYDP GN   ++P+
Sbjct: 130 RLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh19G005500 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 181.4 bits (459), Expect = 4.3e-46
Identity = 87/137 (63.50%), Postives = 104/137 (75.91%), Query Frame = 1


Query: 24  AQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSGGPYGENLAW 83
           AQDS QD+VNAHN AR+ +GVG ++WDE +A +AR YANQ K +C+LVHS GPYGENLA 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 84  SSYNLSGIAAVWMWVTERQYYNPRTNTC---AAGKTQVVWRKSVRIGCAKVRCTNNRGTF 143
           S  +LSG+AAV +WV E+  YN  TNTC       TQVVWR SVR+GCAKVRC NN GT 
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGCAKVRC-NNGGTI 145

Query: 144 ITCNYDPPGNVRGQRPF 158
           I+CNYDPPGN   Q+P+
Sbjct: 146 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh19G005500 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.6e-45
Identity = 92/164 (56.10%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 1   MDLFKLSLFLFYVSSF--AMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFAR 60
           M +F  S  LF   +F   ++    AQDSPQDF+  HN ARA VGVG ++WDE++A +AR
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK--- 120
            YANQRK +C + HS G YGEN+AWSS +++G+AAV MWV E+  Y+  +NTCA  K   
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 --TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
             TQVVWR S R+GCAKVRC NN  TFITCNYDPPGN  G+ P+
Sbjct: 121 HYTQVVWRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh19G005500 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-39
Identity = 82/162 (50.62%), Postives = 106/162 (65.43%), Query Frame = 1


Query: 3   LFKLSLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYAN 62
           LF L++ LFY         SLA+D  Q F+ AHN AR  VG+  + WD+ +A +A  YAN
Sbjct: 9   LFLLAIALFY--------GSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYAN 68

Query: 63  QRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTC-------AAGK 122
           QR ++C LVHS GP+GEN+A SS  +S   A  MW+ E+QYY+  +NTC           
Sbjct: 69  QRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHY 128

Query: 123 TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           TQVVW+ +VR+GCAKV C N+ GTFITCNYDPPGN  G++PF
Sbjct: 129 TQVVWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of CmoCh19G005500 vs. TAIR10
Match: AT4G33710.1 (AT4G33710.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-39
Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 1


Query: 24  AQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKHNCKLVHSG--GPYGENL 83
           AQD  QD+++ HN AR  V V H+KW    AR+A  YA +RK +C+L+HS   G YGENL
Sbjct: 27  AQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQRRKRDCRLIHSNSRGRYGENL 86

Query: 84  AWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWRKSVRIGCAKVRCTNN 143
           AWSS ++SG AAV +WV E+  Y  ++NTC AGK     TQVVW+ S  +GCAKV+C +N
Sbjct: 87  AWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQCGHYTQVVWKNSEWVGCAKVKC-DN 146

Query: 144 RGTFITCNYDPPGNVRGQRPF 158
            GTF+TCNY  PGNVRG+RP+
Sbjct: 147 GGTFVTCNYSHPGNVRGRRPY 166

[Close]

BLAST of CmoCh19G005500 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60
Identity = 119/164 (72.56%), Postives = 135/164 (82.32%), Query Frame = 1


Query: 1   MDLFKLSLFL--FYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFAR 60
           MD+ KLSL L  F V +F MLPSSLAQDSP+DFVNAHNAARA VGVG V WDER+A FAR
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK--- 120
           QYANQR ++C+LVHSGGPYGEN+AW   +LSG AAV MWV E+Q+YN  +NTCAAGK   
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 --TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
             TQVVWR SVRIGCAKVRCTNNRGTFI CNY+P GN+ GQ+P+
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of CmoCh19G005500 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-54
Identity = 111/164 (67.68%), Postives = 128/164 (78.05%), Query Frame = 1


Query: 1   MDLFKLSLFL--FYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFAR 60
           MD+ KLSL L  F V +F MLPSSLAQDSPQDF++AHN ARA  GV  V+WDE +A FA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK--- 120
           QYANQR ++C LVHSGGPYGEN+AW   +LSG AAV MWV E+++Y+  +NTCAA +   
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 --TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
             TQVVWR SVRIGCAKV CTNN GTFITCNYDPPGN  GQRP+
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of CmoCh19G005500 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-54
Identity = 104/163 (63.80%), Postives = 128/163 (78.53%), Query Frame = 1


Query: 1   MDLFKLSLFLFYV-SSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQ 60
           MDL  LS  LF V S F MLPSSLAQDSPQD+VN+HN ARA VGVG +KWDE++A ++R 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANQRKHNCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK---- 120
           YAN+R ++C+LVHS GPYGEN+AW S +LSGI AV +WV E+QYYN  +N+CA+GK    
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 -TQVVWRKSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
            TQVVW+ S+R+GCAKV+C N  G FI CNYDP GN+ GQRP+
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of CmoCh19G005500 vs. NCBI nr
Match: gi|568866972|ref|XP_006486820.1| (PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis])

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-53
Identity = 105/156 (67.31%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 7   SLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKH 66
           SL LF +   A++ SS AQDSPQD+VNAHNAARA VGVG V WD+R+A +A+ YANQRK 
Sbjct: 8   SLPLFCILGLALILSSHAQDSPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANQRKG 67

Query: 67  NCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWR 126
           +C LVHSGGPYGENLAWSS  LSG  AV +WV E+  Y+  +NTCAAGK     TQVVWR
Sbjct: 68  DCNLVHSGGPYGENLAWSSAGLSGTDAVKLWVNEKADYHYNSNTCAAGKVCGHYTQVVWR 127

Query: 127 KSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
           KSVRIGCAKV C NN+GTFI CNYDPPGN  G++P+
Sbjct: 128 KSVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of CmoCh19G005500 vs. NCBI nr
Match: gi|568866976|ref|XP_006486822.1| (PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis])

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 104/156 (66.67%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 7   SLFLFYVSSFAMLPSSLAQDSPQDFVNAHNAARALVGVGHVKWDERIARFARQYANQRKH 66
           SL LF +   A++ SS AQDSPQD+VNAHNAARA VGVG V WD+R+A +A+ YANQRK 
Sbjct: 8   SLPLFCILGLALILSSHAQDSPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANQRKG 67

Query: 67  NCKLVHSGGPYGENLAWSSYNLSGIAAVWMWVTERQYYNPRTNTCAAGK-----TQVVWR 126
           +C LVHSGGPYGENLAWSS  LSG  AV MWV E+  Y+  +NTCA GK     TQVVWR
Sbjct: 68  DCNLVHSGGPYGENLAWSSAGLSGTDAVKMWVNEKADYDYNSNTCAEGKVCGHYTQVVWR 127

Query: 127 KSVRIGCAKVRCTNNRGTFITCNYDPPGNVRGQRPF 158
            SVRIGCAKV C NN+GTFI CNYDPPGN  G++P+
Sbjct: 128 NSVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

The following BLAST results are available for this feature:

BLAST of CmoCh19G005500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_SAMNI	1.8e-46	62.03	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]
PR1_ARATH	2.4e-46	58.17	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	7.6e-45	63.50	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR12_HORVU	4.9e-44	55.63	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]
PR13_HORVU	6.4e-44	56.25	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of CmoCh19G005500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2V9_CUCSA	9.6e-55	63.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
A0A0A0K6A4_CUCSA	9.6e-55	67.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
V4U9J3_9ROSI	2.0e-52	66.03	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1	[more]
H3K3Z1_CUCME	6.4e-51	75.38	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1	[more]
A0A0F6RAM4_9ROSI	5.5e-50	59.87	Pathogenesis-related gene 1-like protein PR1-1 OS=Dimocarpus longan PE=2 SV=1	[more]

BLAST of CmoCh19G005500 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	1.3e-47	58.17	pathogenesis-related gene 1	[more]
AT2G14580.1	4.3e-46	63.50	basic pathogenesis-related protein 1	[more]
AT4G33720.1	3.6e-45	56.10	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	1.0e-39	50.62	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT4G33710.1	1.0e-39	55.32	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of CmoCh19G005500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110129\|ref\|XP_008455064.1\|	1.3e-60	72.56	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|778724783\|ref\|XP_011658861.1\|	1.4e-54	67.68	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	1.4e-54	63.80	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|568866972\|ref\|XP_006486820.1\|	2.0e-53	67.31	PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis]	[more]
gi\|568866976\|ref\|XP_006486822.1\|	1.3e-52	66.67	PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005500.1	CmoCh19G005500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 140..153 score: 1.0E-14coord: 47..65 score: 1.0E-14coord: 112..128 score: 1.0E-14coord: 93..106 score: 1.0
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..157 score: 2.7
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 25..157 score: 5.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..145 score: 4.0
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..153 score: 3.6
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 15..157 score: 2.62
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 140..151 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..157 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005500	Cla001621	Watermelon (97103) v1	cmowmB496
CmoCh19G005500	ClCG02G007190	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005500	Bhi05G000860	Wax gourd	cmowgoB0642

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005500	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005500	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005500	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005500	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005500	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005500	Melon (DHL92) v3.5.1	cmomeB475
CmoCh19G005500	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G005500	Watermelon (97103) v1	cmowmB478
CmoCh19G005500	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005500	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G005500	Bottle gourd (USVL1VR-Ls)	cmolsiB467
CmoCh19G005500	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005500	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G005500	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005500	Melon (DHL92) v3.6.1	cmomedB550
CmoCh19G005500	Silver-seed gourd	carcmoB0615
CmoCh19G005500	Silver-seed gourd	carcmoB0998
CmoCh19G005500	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005500	Watermelon (97103) v2	cmowmbB505
CmoCh19G005500	Watermelon (97103) v2	cmowmbB512
CmoCh19G005500	Wax gourd	cmowgoB0635
CmoCh19G005500	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005500	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005500	Cucumber (Gy14) v1	cgycmoB0627