CmoCh19G005490 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G005490
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
LocationCmo_Chr19 : 6329305 .. 6329616 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCCCTCGTCTTTCGCTCAAGACTCGCCTCAAGATTATGTCGATGCCCACAACAAAGCTCGTGCTGAAGTTGGTGTTGGGCCGGTCCAGTGGGACGAAAAAGTAGCTAATTTTGCTCGACAATATGGCAACAAACATATCAATGACTGTGAAGCGGTGCACTCACACGGACCATTTGGTGAGAATATTTCATATGGTTTTCCTGACTTATCAGGCACTGCTGCAGTTCAGGAATGGGTTGATGAGAAGCAATTCTACGATCTTAGCACCAATACTTGTGCACCTTACAGCAGTTCAGGAATGGGTTGA

mRNA sequence

ATGCTCCCCTCGTCTTTCGCTCAAGACTCGCCTCAAGATTATGTCGATGCCCACAACAAAGCTCGTGCTGAAGTTGGTGTTGGGCCGGTCCAGTGGGACGAAAAAGTAGCTAATTTTGCTCGACAATATGGCAACAAACATATCAATGACTGTGAAGCGGTGCACTCACACGGACCATTTGGTGAGAATATTTCATATGGTTTTCCTGACTTATCAGGCACTGCTGCAGTTCAGGAATGGGTTGATGAGAAGCAATTCTACGATCTTAGCACCAATACTTGTGCACCTTACAGCAGTTCAGGAATGGGTTGA

Coding sequence (CDS)

ATGCTCCCCTCGTCTTTCGCTCAAGACTCGCCTCAAGATTATGTCGATGCCCACAACAAAGCTCGTGCTGAAGTTGGTGTTGGGCCGGTCCAGTGGGACGAAAAAGTAGCTAATTTTGCTCGACAATATGGCAACAAACATATCAATGACTGTGAAGCGGTGCACTCACACGGACCATTTGGTGAGAATATTTCATATGGTTTTCCTGACTTATCAGGCACTGCTGCAGTTCAGGAATGGGTTGATGAGAAGCAATTCTACGATCTTAGCACCAATACTTGTGCACCTTACAGCAGTTCAGGAATGGGTTGA
Homology
[Close]
BLAST of CmoCh19G005490 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.4e-28
Identity = 50/94 (53.19%), Postives = 72/94 (76.60%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           ++ SS AQ+SPQDY++ HN AR +VGVGP+ WD ++A +A+ Y N+ I DC  +HSHGP+
Sbjct: 17  LIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPY 76

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
           GEN++  FP L+   AV+ WVDEK+FYD ++N+C
Sbjct: 77  GENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSC 110

[Close]
BLAST of CmoCh19G005490 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-25
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 1 

Query: 7   AQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENISY 66
           AQDS QDYV+AHN+AR+++GVGP+QWDE +A +AR Y N+   DC  VHS GP+GEN++ 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 67  GFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
              DLSG AAV  WV+EK  Y+  TNTC
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC 113

[Close]
BLAST of CmoCh19G005490 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-25
Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           +LPS  AQDSPQDY+  HN+AR  VGVGP+QWDE+VA +AR Y  +   +C  +HS GP+
Sbjct: 21  VLPSK-AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 80

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
           GEN+++G  DLSG +AV  WV EK  Y+ + NTC
Sbjct: 81  GENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC 113

[Close]
BLAST of CmoCh19G005490 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGP- 60
           M+  S AQ+SPQDYVDAHN AR+ V VGPV WDE VA FARQY      DC  VHS  P 
Sbjct: 22  MVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHSGDPR 81

Query: 61  FGENISYGFP-DLSGTAAVQEWVDEKQFYDLSTNTCAP 97
           +GEN+++G   +L+G  AV  WV E+  Y+ +TNTCAP
Sbjct: 82  YGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAP 119

[Close]
BLAST of CmoCh19G005490 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1 

Query: 4   SSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGEN 63
           SS AQ   +++++AHN AR  VGVGP+ WD+ +A +A+ Y N+  +DC  +HS GP+GEN
Sbjct: 18  SSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGEN 77

Query: 64  ISYGFPDLSGTAAVQEWVDEKQFYDLSTNTCAP 97
           ++  FP L+   AV+ W DEKQ+YD ++NTCAP
Sbjct: 78  LAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAP 110

[Close]
BLAST of CmoCh19G005490 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.6e-34
Identity = 68/95 (71.58%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           MLPSS AQDSPQD++DAHN ARA+ GV PVQWDE VA+FA QY N+ INDC  VHS GP+
Sbjct: 20  MLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPY 79

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           GENI++G PDLSGTAAV+ WV+EK+FYD  +NTCA
Sbjct: 80  GENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCA 114

[Close]
BLAST of CmoCh19G005490 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.0e-34
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           MLPSS AQDSPQDYV++HN ARA VGVGP++WDEKVAN++R Y NK +NDC  VHS+GP+
Sbjct: 19  MLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYANKRMNDCRLVHSNGPY 78

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           GENI++G PDLSG  AV+ WVDEKQ+Y+ ++N+CA
Sbjct: 79  GENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCA 113

[Close]
BLAST of CmoCh19G005490 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-32
Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 1 

Query: 8  QDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENISYG 67
          QDSP+D+V+AHN ARA+VGVGPV WDE+VA+FARQY N+ INDC  VHS GP+GENI++G
Sbjct: 1  QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 68 FPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           PDLSGTAAVQ WV+EKQFY+  +NTCA
Sbjct: 61 MPDLSGTAAVQMWVNEKQFYNYGSNTCA 88

[Close]
BLAST of CmoCh19G005490 vs. TrEMBL
Match: A0A0A0K7P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.5e-32
Identity = 62/94 (65.96%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           +  SS AQD PQ++VDAHN ARA+VGVGPV WDE VAN+A+QY N+HINDC+ VHS+GP+
Sbjct: 22  LFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANYAQQYANQHINDCQMVHSNGPY 81

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
           GEN+++   DLSGT AVQ WV+EKQFYD ++N+C
Sbjct: 82  GENLAWSSADLSGTNAVQMWVNEKQFYDYASNSC 115

[Close]
BLAST of CmoCh19G005490 vs. TrEMBL
Match: B2CZ52_CUCME (Pathogen-related protein 1 OS=Cucumis melo var. inodorus GN=Cuc m 3 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-29
Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = 1 

Query: 1  MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
          MLP SFAQDS +D+VDAHN ARA+VGVGPV W++ VA++A QY NK I DC  VHS GP+
Sbjct: 1  MLPFSFAQDSIKDFVDAHNAARAQVGVGPVHWNKTVADYAHQYANKRIKDCNLVHSKGPY 60

Query: 61 GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
          GENI++G  +L+GT AV+ WV EKQFY+  TN+C
Sbjct: 61 GENIAWGSRNLAGTVAVRMWVSEKQFYNYDTNSC 94

[Close]
BLAST of CmoCh19G005490 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 116.7 bits (291), Expect = 8.5e-27
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 1 

Query: 7   AQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENISY 66
           AQDS QDYV+AHN+AR+++GVGP+QWDE +A +AR Y N+   DC  VHS GP+GEN++ 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 67  GFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
              DLSG AAV  WV+EK  Y+  TNTC
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC 113

[Close]
BLAST of CmoCh19G005490 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 2.5e-26
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 1 

Query: 7   AQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENISY 66
           AQDSPQD++  HN+ARAEVGVGP++WDEKVA +AR Y N+   DC   HS G +GENI++
Sbjct: 26  AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAW 85

Query: 67  GFPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
               ++G AAV  WVDE+  YD  +NTCA
Sbjct: 86  SSGSMTGVAAVDMWVDEQFDYDYDSNTCA 114

[Close]
BLAST of CmoCh19G005490 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 115.2 bits (287), Expect = 2.5e-26
Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           +LPS  AQDSPQDY+  HN+AR  VGVGP+QWDE+VA +AR Y  +   +C  +HS GP+
Sbjct: 21  VLPSK-AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 80

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
           GEN+++G  DLSG +AV  WV EK  Y+ + NTC
Sbjct: 81  GENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC 113

[Close]
BLAST of CmoCh19G005490 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-24
Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 1 

Query: 5   SFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENI 64
           S A+D  Q +++AHN+AR EVG+ P+ WD++VA +A  Y N+ INDC  VHS+GPFGENI
Sbjct: 20  SLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENI 79

Query: 65  SYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
           +    ++S   A + W++EKQ+YD  +NTC
Sbjct: 80  AMSSGEMSAEDAAEMWINEKQYYDYDSNTC 109

[Close]
BLAST of CmoCh19G005490 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 94.7 bits (234), Expect = 3.4e-20
Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 1 

Query: 11  PQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENISYGFPD 70
           PQ+ +  HNKARA VGVGP+ W+E +A +A+ Y ++   DC   HS GPFGEN++ G+  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 71  LSGTAAVQEWVDEKQFYDLSTNTC 95
           +SG  A + W+ EK+ YD  +NTC
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTC 125

[Close]
BLAST of CmoCh19G005490 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 9.4e-36
Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           MLPSS AQDSP+D+V+AHN ARA+VGVGPV WDE+VA+FARQY N+ INDC  VHS GP+
Sbjct: 20  MLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPY 79

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           GENI++G PDLSGTAAVQ WV+EKQFY+  +NTCA
Sbjct: 80  GENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCA 114

[Close]
BLAST of CmoCh19G005490 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 5.2e-34
Identity = 68/95 (71.58%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           MLPSS AQDSPQD++DAHN ARA+ GV PVQWDE VA+FA QY N+ INDC  VHS GP+
Sbjct: 20  MLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPY 79

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           GENI++G PDLSGTAAV+ WV+EK+FYD  +NTCA
Sbjct: 80  GENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCA 114

[Close]
BLAST of CmoCh19G005490 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-33
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 1 

Query: 1   MLPSSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPF 60
           MLPSS AQDSPQDYV++HN ARA VGVGP++WDEKVAN++R Y NK +NDC  VHS+GP+
Sbjct: 19  MLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYANKRMNDCRLVHSNGPY 78

Query: 61  GENISYGFPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           GENI++G PDLSG  AV+ WVDEKQ+Y+ ++N+CA
Sbjct: 79  GENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCA 113

[Close]
BLAST of CmoCh19G005490 vs. NCBI nr
Match: gi|659110133|ref|XP_008455066.1| (PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 9.7e-33
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 1 

Query: 4   SSFAQDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGEN 63
           SS AQDSPQD+VDAHN ARA+VGVGPV WDE VAN+A+QY N+HINDC+ VHS+GP+GEN
Sbjct: 24  SSIAQDSPQDFVDAHNAARAQVGVGPVSWDETVANYAQQYANQHINDCQMVHSNGPYGEN 83

Query: 64  ISYGFPDLSGTAAVQEWVDEKQFYDLSTNTC 95
           +++   DLSGT AVQ WV+EKQFYD ++N+C
Sbjct: 84  LAWSSADLSGTNAVQMWVNEKQFYDYASNSC 114

[Close]
BLAST of CmoCh19G005490 vs. NCBI nr
Match: gi|377347202|dbj|BAL63012.1| (pathogenesis-related protein 1-1a, partial [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-32
Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 1 

Query: 8  QDSPQDYVDAHNKARAEVGVGPVQWDEKVANFARQYGNKHINDCEAVHSHGPFGENISYG 67
          QDSP+D+V+AHN ARA+VGVGPV WDE+VA+FARQY N+ INDC  VHS GP+GENI++G
Sbjct: 1  QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 68 FPDLSGTAAVQEWVDEKQFYDLSTNTCA 96
           PDLSGTAAVQ WV+EKQFY+  +NTCA
Sbjct: 61 MPDLSGTAAVQMWVNEKQFYNYGSNTCA 88

The following BLAST results are available for this feature:
BLAST of CmoCh19G005490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRB1_TOBAC9.4e-2853.19Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PRB1_ARATH1.5e-2559.09Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR1_ARATH4.4e-2555.32Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1[more]
PR1_SAMNI1.1e-2356.12Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1[more]
PR1A_SOLLC1.4e-2349.46Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1[more]
BLAST of CmoCh19G005490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6A4_CUCSA3.6e-3471.58Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1[more]
A0A0A0K2V9_CUCSA8.0e-3468.42Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1[more]
H3K3Z1_CUCME1.5e-3272.73Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1[more]
A0A0A0K7P0_CUCSA7.5e-3265.96Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1[more]
B2CZ52_CUCME3.5e-2963.83Pathogen-related protein 1 OS=Cucumis melo var. inodorus GN=Cuc m 3 PE=2 SV=1[more]
BLAST of CmoCh19G005490 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14580.18.5e-2759.09 basic pathogenesis-related protein 1[more]
AT4G33720.12.5e-2657.30 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14610.12.5e-2655.32 pathogenesis-related gene 1[more]
AT3G19690.12.3e-2450.00 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G19990.13.4e-2047.62 pathogenesis-related protein-1-like[more]
BLAST of CmoCh19G005490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110129|ref|XP_008455064.1|9.4e-3673.68PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo][more]
gi|778724783|ref|XP_011658861.1|5.2e-3471.58PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|778724786|ref|XP_004136929.2|1.1e-3368.42PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|659110133|ref|XP_008455066.1|9.7e-3370.33PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo][more]
gi|377347202|dbj|BAL63012.1|2.2e-3272.73pathogenesis-related protein 1-1a, partial [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005490.1CmoCh19G005490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..94
score: 5.2
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 7..97
score: 2.8
IPR014044CAP domainPFAMPF00188CAPcoord: 15..95
score: 1.
IPR014044CAP domainSMARTSM00198SCP_3coord: 9..103
score: 3.5
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 7..98
score: 2.49
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 1..94
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G005490Wild cucumber (PI 183967)cmocpiB525
CmoCh19G005490Cucumber (Chinese Long) v2cmocuB519
CmoCh19G005490Melon (DHL92) v3.5.1cmomeB454
CmoCh19G005490Melon (DHL92) v3.5.1cmomeB475
CmoCh19G005490Watermelon (Charleston Gray)cmowcgB454
CmoCh19G005490Watermelon (Charleston Gray)cmowcgB459
CmoCh19G005490Watermelon (97103) v1cmowmB478
CmoCh19G005490Watermelon (97103) v1cmowmB496
CmoCh19G005490Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G005490Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G005490Bottle gourd (USVL1VR-Ls)cmolsiB467
CmoCh19G005490Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G005490Cucumber (Gy14) v2cgybcmoB928
CmoCh19G005490Melon (DHL92) v3.6.1cmomedB523
CmoCh19G005490Melon (DHL92) v3.6.1cmomedB550
CmoCh19G005490Silver-seed gourdcarcmoB0615
CmoCh19G005490Silver-seed gourdcarcmoB0998
CmoCh19G005490Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G005490Watermelon (97103) v2cmowmbB505
CmoCh19G005490Watermelon (97103) v2cmowmbB512
CmoCh19G005490Wax gourdcmowgoB0635
CmoCh19G005490Wax gourdcmowgoB0642
CmoCh19G005490Cucurbita moschata (Rifu)cmocmoB110
CmoCh19G005490Cucurbita moschata (Rifu)cmocmoB395
CmoCh19G005490Cucumber (Gy14) v1cgycmoB0627
CmoCh19G005490Cucurbita maxima (Rimu)cmacmoB143
CmoCh19G005490Cucurbita maxima (Rimu)cmacmoB508