CmoCh19G005120 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCAAAAGTGGATTAGCTTAGCCCATAAACACACAAACGAGAACTCTCTAGATGCTCCACTTTTCCAACTGCTCCTTTCTTCTTCAATACAACTAGAATTTTTCCTTTTTATTGTCAAAAACACACGAGCAAATAGTGATAAAACAAAGAGAATCCCATAAACTCCATATCTTCTTCTTAAATACCTTCTTCTTCTCTTCATTTAAGCTCGTGTTGATCCGAAGATATGAGCGATCCCAAATATGCCTACCCGTACCCACCTCCTCCAGGTATTACTAGTTGTTATCTGTTGAGCTATGCTTAAATTGATTGCTTTCTGGGTCTCGTTTGATTTAGCGATTTGGATGATGTGATCTATTCACAGGAGGGTATTATCAAGGACCGCCCGTGATGGCGCCGCCGCAATACGCTGCACCGCCACCGAAAAGACAACCGGGGTTTTTGGAGGGATGGTACGTCAAAAAGGTTTGTTGTTTGTTGAATGGTTTAGGGTTAGAATTTGGCTAACAAAGGGTTTAACTTTGTGTGATGCAGCCTTGCAGCTCTGTGTTGCTGCTGCCTCCTTGATGAGTGCTGCTGTGATCCTTCCATACTCCTTGTCACTTGATATGAGCTTTGCTTGCCTAATTTGTAGCTGTGAAATGGGTTATGTTCTTCTACCTTCTTTGGGAGTGGGTTTGAGTTTGTGTAAACTTTGGAAAGAATATTGTTGATTGGTGTCTAGAATAAAGCTTTGTTTTGATGTGAAGTGTAGAGTTTAATTACGAAAGTTGTGAAATTTGTCGATCGTTTTGACTTTTCGACTAAAAAATTTGAGGTTAAAC TCTTCAAAAGTGGATTAGCTTAGCCCATAAACACACAAACGAGAACTCTCTAGATGCTCCACTTTTCCAACTGCTCCTTTCTTCTTCAATACAACTAGAATTTTTCCTTTTTATTGTCAAAAACACACGAGCAAATAGTGATAAAACAAAGAGAATCCCATAAACTCCATATCTTCTTCTTAAATACCTTCTTCTTCTCTTCATTTAAGCTCGTGTTGATCCGAAGATATGAGCGATCCCAAATATGCCTACCCGTACCCACCTCCTCCAGGAGGGTATTATCAAGGACCGCCCGTGATGGCGCCGCCGCAATACGCTGCACCGCCACCGAAAAGACAACCGGGGTTTTTGGAGGGATGCCTTGCAGCTCTGTGTTGCTGCTGCCTCCTTGATGAGTGCTGCTGTGATCCTTCCATACTCCTTGTCACTTGATATGAGCTTTGCTTGCCTAATTTGTAGCTGTGAAATGGGTTATGTTCTTCTACCTTCTTTGGGAGTGGGTTTGAGTTTGTGTAAACTTTGGAAAGAATATTGTTGATTGGTGTCTAGAATAAAGCTTTGTTTTGATGTGAAGTGTAGAGTTTAATTACGAAAGTTGTGAAATTTGTCGATCGTTTTGACTTTTCGACTAAAAAATTTGAGGTTAAAC ATGAGCGATCCCAAATATGCCTACCCGTACCCACCTCCTCCAGGAGGGTATTATCAAGGACCGCCCGTGATGGCGCCGCCGCAATACGCTGCACCGCCACCGAAAAGACAACCGGGGTTTTTGGAGGGATGCCTTGCAGCTCTGTGTTGCTGCTGCCTCCTTGATGAGTGCTGCTGTGATCCTTCCATACTCCTTGTCACTTGA
BLAST of CmoCh19G005120 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-07 Identity = 40/75 (53.33%), Postives = 41/75 (54.67%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TrEMBL
Match: B9SMJ5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0230320 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 8.9e-26 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TrEMBL
Match: A0A061DHF5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000918 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 2.6e-25 Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TrEMBL
Match: A0A0D2NVV1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G036100 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 2.6e-25 Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TrEMBL
Match: D7T5D4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0415g00070 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 4.4e-25 Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TrEMBL
Match: V7CN31_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G143000g PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 5.8e-25 Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TAIR10
Match: AT4G33660.1 (AT4G33660.1 unknown protein) HSP 1 Score: 89.4 bits (220), Expect = 9.4e-19 Identity = 49/74 (66.22%), Postives = 53/74 (71.62%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein) HSP 1 Score: 58.5 bits (140), Expect = 1.8e-09 Identity = 38/63 (60.32%), Postives = 40/63 (63.49%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-08 Identity = 40/75 (53.33%), Postives = 41/75 (54.67%), Query Frame = 1
BLAST of CmoCh19G005120 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein) HSP 1 Score: 47.0 bits (110), Expect = 5.4e-06 Identity = 30/60 (50.00%), Postives = 33/60 (55.00%), Query Frame = 1
BLAST of CmoCh19G005120 vs. NCBI nr
Match: gi|223533390|gb|EEF35140.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 123.6 bits (309), Expect = 1.3e-25 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
BLAST of CmoCh19G005120 vs. NCBI nr
Match: gi|719995883|ref|XP_010254642.1| (PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera]) HSP 1 Score: 123.2 bits (308), Expect = 1.7e-25 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
BLAST of CmoCh19G005120 vs. NCBI nr
Match: gi|763750765|gb|KJB18153.1| (hypothetical protein B456_003G036100 [Gossypium raimondii]) HSP 1 Score: 122.1 bits (305), Expect = 3.7e-25 Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 1
BLAST of CmoCh19G005120 vs. NCBI nr
Match: gi|590706350|ref|XP_007047698.1| (Uncharacterized protein TCM_000918 [Theobroma cacao]) HSP 1 Score: 122.1 bits (305), Expect = 3.7e-25 Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 1
BLAST of CmoCh19G005120 vs. NCBI nr
Match: gi|296084629|emb|CBI25717.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 121.3 bits (303), Expect = 6.3e-25 Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |