CmoCh19G003500 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATTCAAGAGGTCTCGCTTTTGTTGATGAATTCAGCTGGATAGGTATGTCTTATGTGAGTCTTTACCTAGTTTATAGTACCCACACGCTTCGGTTGATGTTACCGTAATCTTTTCGTGATGTGTTCTCGTCGTGACACAATGGACTTGGCAGCATCAGGCAAAGAGAGGTAAAGGTCATATATTTGCAAATTGCTATGAAATATTGGTGTCTTGAGAGGCTGCATTATATTTTGCCAAAACTCATGATTTGTACCATGATAACATCTTACACAAGAATCATTAGAAGTGGCATATTCTAACAGTTTGTGTACGACTTTTGGCTAGCATTTTAATGGGATAATCTGATTAAGAGAATGATTCGAATGCTTTGACCAATTTATTCTTTTGACATTCTTCACCATTACCACTTGGTTCAAGTCAAAGATTTAGTTCGACATATTCTCTTTATAAGGCATTTGTGGATCTAATTCGAATGCTTTGACCATTGATTTTTTTTTTATAAGGCACTTGGTTCAAGTCAACCTCTTTATAAGGCATGATGTGATGTACTGATAATATTGTTGGATCGATATGACAACCCTAGAGGGGTGAATAGGGTTTCAACAATATAAATATTAAAATTTTCTAGTAACAATAAAACTTATATTATGCAATAAAACTTAACAATAATTTAGAATTTAAATAGGAAAAGAGTTAGAAAATATAACACCATGGTTTGGTCAAACTCGACCTACTCCACTCCCCAAGCTCCTCTTGGGAATTTGAATAAAATTTTCTAACTCTTTCCTCAGATCAGAGTCCAACCGCTACTTTTATGAGTGCAAGAGCAAACTCAATTCTTTCCACAGCTCAGGATCAAACCGGTACACCGTTCTTTTTACGAGTTCAAGAGCAAACACAATCCTTTTCACGGCTCAGGATCAAACCGGTACAACTATCTGAAATCTTATAGAAACACACAACTCGAAACACACAACTCTCTGAAGTAATAGATTTACAATTTTCTCACAATACAATAGACATCTCTCTCAAGAATAAGATAAACCATAAATAGAATTGGACGCTTCGGAGAGATTTCTCACAATACAATAGACATCTCTCTCAAGAATAAGATAAACCAGAAATAGAATTGGAAGCTTCGGAGAGATTTCTCACAATACAATATAGAATTGGAAGCTTTGGAGAGATTTTTCACAATACAATAGACATCTCTCTCAAGAATAAGATAAACCAGAAATATAATTAGAAGCTTTTGGAGAGATTTCTTATAATAGACATCTCTCTCAAGAACAAGATAAACCAGAAATAGAATTGGAAGCTTTGGAGAGATTTCTCACACTACAATAGACATCTCTCTCAATAATAAGATAAACCAGAAATAAAATTGGAAACTTGGGGGAGAGCAACAATGGAAGCTTTTAAAAAAGTTGTGTATTGTGTTCTATGTTCTGTGTGTTGTGTTTTCGATTGATCCACGATGTCAATTTTGCCGTTGGTCCATGATGTTAATTTTGTCACCACATCATCGTGTCCGATATCTTGTTTTGAATTCGATTGGTCCATGATGTCAATTTTGCTCCCACATCATCACGTCGGGTATCTTGTTTTGACTGAAAGTTCTTCGTTTTAGCTCTAATTTGAGTGAACCAAAAAAGACGTTGAAATCGTTATTCCCAACCTTACACTGTCTAAAAAATACTGAGAATTGTTAATAATTGAAGATAGGTTTGTTATCATCAAAACATCAATTAATTAATTAATTAAAATTAATTAATTTGAAATTAAGGAAAAAAAAAAAAAAAACAACAACTATGATAAATGTTATGGTGTAACACGTTTGGCGATATAGTACATGTTATATGATATGCTGATGATATATATATATATATATATACATCTTTGGTATTGATCTTTTACAGGGGAGGGAAGGTAATATCGCTGTACCCTGTAAGAATCAATAGGTGATTGAAGGAATAAATAGGGAGAGGAGCGAGCGAAGCAGACTGATAGTTTACGAGGGGCAGACAATAGAATTGTGAGACCGATAGGTGAATGGGCAGGTTCTAGAGCAAAATGGATACAAATTAGTGGCTGCTACTTAGTATGGGCAATGGGTCTGAAAAAGTCTCTAAACTCAAAATGGTGAGATATTTGTACCCTGTCGAAGTAAGGAACCATGACATATATGTTTGGAATAGATTCCTTTACCAATTGAGAGAGTTGAAAAAGCACTATCTCGTTGAAAGGTTCTATACATCTGCCCTTGATCAAGGCATTTAGATAAAGACTCGTTTTTTCCTCTTTTCGGATGGTAAATCTTTCTCAGAACATGGAGTGTGAATCAAAGCCCCATCTTTGAATTGAAATTGAGATATTGATGCAAGTTCTTCCCCTCTGAATAAGATAGATTCATATCTGAAAGAGGTTGACAATAAGTTTTTTCAAAATTGACTTTTTGTCCCTCTGTTAGGTTAGATGTGTTCTAGAAATGTCTATGATCGAGTAAATAGCTCGACGAACGAATGGATTGAATCGAATTGGAAAATGGAAAAATTTGTACAAGTTATACCTTTCCACTTTGTGTAAAATAGTCAGGTATGAATATGTTAGATACTTGTGACTTGATTGGTTAAATAGTATCTCTCTCCCAGCAGCATGTTTTTTTTACGGCCGCACAAAGAAAAGATTTTGTTGCGAATGAACAAGATATTGAGGAATTGTCCATACGTCAAATCATAATTATTGATACGGGTCTTTTCCACATAACCAACATACATCAAAAGGGAATCTTTTGTTACAATAGAAGCAGAGTAGATAGAGTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTTAGCCAATTGTCTTGATCGTGGGATATCATTGAGAAATAGGAGAGTGTTATCAAAGGATTTCCTGTGATTCTTTCTAGTATGGAATGAGTAAATCATTTACTTTGCTATCTTATCGAAGAAAAAGAAATTGTTATATTGTTCTTGATCAAGAATTTCTCTTTTTGGGAAGTCTCATGATCATCCAATAAGAAGGGTTTCCATTTTGTCAAATTCAAACTCTTTGAAGACCTATTGATTCTAACAACTGATTTTAGAGTTGATCATTCGGACCTTTCAATTCATAGATGTAGATCTCGGACCTATTAATGGAGATATTCTCGAAACTCATAAAGAAAAAAGGAAGTGAGTTAGAATAGAAGAAACTTGGACAAAAAGAAAGGAAGTGACTTAGACAGACAAATCCTTTTTATAGATAACATCATACCAATCCAGCGAATATAGATTAATATGTAATCGATCCAACACTACTTGAAAATGGCTCTTTCGCTCAGAAATGAAATATTCCTGGAAATTCTTGCTCCCACTCCCATTGGACCATTTCTATCTATATGCATTAGAATCCCGATTCATGGATCTCTCGAGAAAGAAAAATAAGAGGAAGAGGATCAAACCATTTCTTCTGACCCTTTTTCTTGATAAATCTTGGTTGATCGTATATTGCATTATAGTTCTATGATTAAGAGAAGAGTCTCATTTCCTATTTGATCCATTTTCATTCTATATTCTAAGTTGCGATCGGATCTATAAAAAGAATCGATTCAATACTTATGGTACTTATATTGGATTTGAATCTGATTTTGGATCAATATAGATTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTCTTTTTTGTTTTGGATCTTCAAAATCATTCCCGGGGGAGGTCCGTACCCATTTTTTTTTGCTGATCCTTCGATTCATTCTCTTCATAAAAAAGAAAGAAAAGGTAGAACCAAGACATCCTTCTTTTTTGATGATATGAATCCAACAACTGATCACTTCCATGTACCTGAACGAGCAATTACAAGAAGTAATACAAATAAGATTCAAGAATCAAATCAAGAAAATAATGGAGTGGCTGATATTGGAAAGTAATTAGAAGACTTGCTTGGTAGTTGAATTACCAATTAAGGAAATTTATGAAAAGTAATTAGAAGACTTGACTTTGTTAGTTGAATTATCAATTAAAGGAATTTATTAATGTCTTATTTGCTTCAATTTGTATTTAATAGCATTCGTTACCATTTATTAGTGATTGGTGGCTGAACTTTATTTTGTTAGGGTTATCTCTTGAGCCTATTTAAAGACATGTAATATTTTGGGGGATTTTGGTTGAATACAGAAAAAACCTTTGTGTTTTCTTGATACCCTTTTGGTGTTATTCTTTTTCAAACCTTGCTTTATGATGTTTAAACCGATTCATTGAATTAGTTTTGATCAAGCTAATTCTGGAGTGAATTGTCTTGGTATCTAAGAGTGACCATCATAGATTCCAAGTTTGATCTAAGAGTCATTCATCTTCTAACCAACTCTTGGTTGGAATCAATCCGTTAAGTTAGCTTTCTCGGTGAGCGTTTTGCAAGGATTCTAGAAGGACCTCTAGCTTTGCAAATTCCAGCATTGTAGGCGTTTATCATTTCGATTCATCCCTTTACTCATGAAAGAATTCTTTTTGATCCAATCTGTAGGAATCAAGGCAAATCCCTTATGATACACCACATCCGGCTCGGTTATTAATAGAGTGAATAGATCTTCCATTTCTTTCAATCTCTCTTCTGATTCAAAATTGTGGTGTAAGGTGTATCCCCTCCAGTTCCGGTCATGGAATAGATGAAATAAATAAATGGATTTTTGTGAAAGAATGAAATCTTATTGTAACGGTCCATATCCAATTCAGCCTTCGGAACAATATCACACCCCGAATCTGATTCAATAGGATGAATTGAGACGTTATTTTGATAACACGTATATATCTTGAATATATTAACTATTTCTTTCTTTTCCGATCGCCTGGAAGGAAGGGACAAAAGATCTTCTTTCTTCAACAATTTCTGATCTCTAGTGAACCTCTTAGTAGGATTCGAACCCATATTCAGTTCTTACCATTTGTCAGACAGAAAAGAACAAATGGATCTTGTAGGATTCCCGAGAAATTCTACAATTTCTTCCCCGGAATCGGATGATTATTCATCTGCTTCTCACTCACATTCTTTGAATAGCCGAGACATTGAGCAATATCCAGAAAAGCATTTTGGGAATCGGTCTGATTCTATCTCTGTTCGTTCTGTTTGAAGAAAGGAAGGATCCCAAAGAATCGATCTTTCTTTTTGTTGTTGAATCTCTCTTTGATTGAGAAATGTATGGTACTCCGAATCCTCATTACTAATGGAATCGAAATGATCTCTGGATTGATCATTAGATTCTTTCAATTGGCTAGAATCCGTTACTTGAACGAAACTAGATCTTGCTTGTGGAATCATATTGAATATTTGACAAGACATTCCGTACCTTGCTAAAAAATCGATCCTTATTTACCAACCAATTGTCTAACCAAATCCGATTCGTGCAGATGGATTCTTCCCCTAACTAATGAAGGAAGAGATCTTGGAGGAATTGCCACATATGAAATTGAGCACAATTTTGCAAAGAAATAGACCACTTCTTTCTCGAGAAGAGATGGGAAAGAAAGATGCTCAATATCATTTGATTGAATAGTTCTCCCATCTCCTTGTTGTTTGAAGAAGCTCAATTGGTCTTTTTTCATGAAAAGCAAGAGATAAGAAATCCAGTCTTTCACTAAGATTTCAAATAGCTGTCCCGAATTCAAGTTGATGCTCTTTTGCCTCTTCCTCGGAGAAAGACGATCAAACAATTACCAATCATGGTCCTTGCCTCTTTCTCTTTGAATGAGATCTCATCAATTCCAGCGACGGTTTCATTAGATATATTACAATGAGCAGGAATCCCTCTTTTTTCCAATCCAGTTCTTCCACCACCGCGAACCCCAGTTAGATTCAGGCATGATACACTTTTGAGTTATTGGGAGAACCCAAGTACTCTCTTTCGGATCCAGGAAAGAGCTCTCAGAGATCCTTTTTCCTTTTTGAAGATGAGCAAAACAATCCACCTATTGATATAGTATAGGAAGAGCCAAAATCTTCTTCCAATGTCTCATTTCTGGGTCCAATGAATAGGTAGAGGAAGAAACCCTATCAAATAGAGTTTCCTTTCGATTGTTAATACGTGATAGATATAAGGAAGGACCACTACTACAAATAGTACTACACCCTTGATCGTGAAATATTGATTGCTTGTTGAACCCTGTGAATTGCGTGAAAGTAGTATACTCTAAATTCGGGAGTCTAAGAGTTTTATAAAACGGGATGGATGAAAACAAATGTGAATGAAAGATACCAGGCCATGAATCTAAAAAATAGTAAGAATGATTGATCTCTCTCAATTAGAAAATCCAAGATTGGAATTGATGTCCTTTCATTGAGGCCTCCTAAATTGCATTGATTTCTCCTAAAGATTGAATTGCAAATTGGAATTTGGTTATTCACCATGTACAAGGATCCTCCGCTAAGCATCCATGGCTGAATGGTTAAACCGCCCAACTCATAATTGACGAATTCGTAGGTTCAATTCGTACGGATGCACACCAATGGGACCCTACAATAAGTCTATCTCATCATCTAGACATATTGGTGTGGTGTATATTCATTATGAACTTGAACTTGCATTCTTATTGAGACTCGAACTCATACAGAAGCGGAAAGGCTAGAAGGAAGAATGAATGGGACCCTATTACAAAAGTACTCGGTTATTGGGACCCTATCTATTATGGGACATACAATACATTACAGACAAAAGTACTCAGTTATTGGGACTATATTATACGACATACAATGCTATATATTCAATATGGATATACATGGGACTCTATTATAGGACATACAATAGGACTCTATTATAGGACATACAATAGGACTTTGTTATAGGACATACAATGCTATATATTCAATATGCGGGACCCTATTATGCACCCTATTATAGGGCATTGGTTATGGGACTCCATTATAGGATGCATTATAGACAAAATATGCACCCTATTATAGTATTGGGACTCGAACTCATAGGGAAACGGAAAGGCTAGAAGGAAGAATGAATGGGACCCTATTATGAGACATACAATGCATTACAAACAAAATATGCTGTATTTACAGACAAAAGTACTCGGTTATTGGAGAAAAAGAAATACTTCTAATGTCGAACTCGTCTTTGGCGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCAGGAAAAGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCACATTACAGACAAAAGTACTCGGTTATTGGAGAAAAAGAAATATACTTCTAATGTCGAACTTGTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCAACTCCTGGGAAAGGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCTATTATATTCCACCTCTTAGAAAGAAAAGAACTGAAAGAAAATTAATAGCATACTATTCTTTCGGAGCACGAGTTTTCGGTTTTGTCTTTCCTTCTCAAGAGAATTAAAGGTGAGGGGAGAGTCAATTCAATCCTCAGCCTATTTACCGAGTTCAATGAAAGAAGGGACAGGTGAATGAACTTGACCTTCAGATCATACAACCTATTTACCTTGTGAAAGAAGTAATAGTCCGAGCAATGGATTGAATCAAAGCCAATTTACCGAGTTCTCGAAGCGAGAGGAAAGAAAAGCAAAGAGAAGAGAAAGAATAAAACACCTAGTTACTTATACCTTGTGAAATCTGGGAGTGAACGATCATGAATAAGGAGTCTTTGTTTACGTTTACAGTTCAATCAGGCGGAGAGAGAGAGGAAATGAATTAGCGGCTTTACCCCCAAAATAAGGGAAGGGAATAGAGGGGAAGAAGCTTGACCGGATGATCATACAACCTATTTACCTCGTGAAAGAAGTAATAGTCCTGTTAAACTCGAATTCATCTTGCTTGAGTGGAGTGGTTACAGTCTTTGAATAACTCACAAGAACTTCCTGAGAATAACTCACAAGAACGGAAGGGAATAGAGGTTCTGTCGAATGAATAGGAGTATTGATCTTTTACTGTTCAGGGCGAGTAAATGAATTGAATATGCTTTACCTTCTTCAATGACCCTAAAAATAGGGAGAGCCGAAGTAGTTCTGTCTCATTCATAAGGAGTTGAGTCTTGACTTCCTGTTCTGTCTCTTTGTAATTACCTCTGAAATGGCCTCAAAAATAGGAGAGAAGTCAACTCTCGAGAATCATTCTTACTTACAATAGAGTAAGTGAAAGAATTAAGGTTTCTTCTTATTCTCATTCATTCAGCCTATTTACCGAGTTTGTGAAGTAGTTCAGGAGAATGAATCTTCAGTCTTAGTTGAAGTGAAAGAATAAAGAGGAGCGAAGCAAAGAGACCGATAGGGAGAGGAGCGAAGCAGCTTTACCGGAGAGTGAAAGACTGA ATGGATGATTCAAGAGGTCTCGCTTTTGTTGATGAATTCAGCTGGATAGGAATCCCTCTTTTTTCCAATCCAGTTCTTCCACCACCGCGAACCCCAACAAAAGTACTCGGTTATTGGAGAAAAAGAAATACTTCTAATGTCGAACTCGTCTTTGGCGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCAGGAAAAGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCACATTACAGACAAAAGTACTCGTCATCAACTCCTGGGAAAGGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGTGAAAGAATAAAGAGGAGCGAAGCAAAGAGACCGATAGGGAGAGGAGCGAAGCAGCTTTACCGGAGAGTGAAAGACTGA ATGGATGATTCAAGAGGTCTCGCTTTTGTTGATGAATTCAGCTGGATAGGAATCCCTCTTTTTTCCAATCCAGTTCTTCCACCACCGCGAACCCCAACAAAAGTACTCGGTTATTGGAGAAAAAGAAATACTTCTAATGTCGAACTCGTCTTTGGCGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCAGGAAAAGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCACATTACAGACAAAAGTACTCGTCATCAACTCCTGGGAAAGGCTAGAAGGAAGAATGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGTGAAAGAATAAAGAGGAGCGAAGCAAAGAGACCGATAGGGAGAGGAGCGAAGCAGCTTTACCGGAGAGTGAAAGACTGA
BLAST of CmoCh19G003500 vs. TrEMBL
Match: W8RN00_PRACL (50S ribosomal protein L23, chloroplastic OS=Praxelis clematidea GN=rpl23 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09 Identity = 40/75 (53.33%), Postives = 46/75 (61.33%), Query Frame = 1
BLAST of CmoCh19G003500 vs. TrEMBL
Match: A0A109X1C7_9ASPA (50S ribosomal protein L23, chloroplastic OS=Bletilla ochracea GN=rpl23 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.9e-06 Identity = 36/75 (48.00%), Postives = 36/75 (48.00%), Query Frame = 1
BLAST of CmoCh19G003500 vs. NCBI nr
Match: gi|598324186|ref|YP_009020805.1| (ribosomal protein L23 (chloroplast) [Praxelis clematidea]) HSP 1 Score: 70.1 bits (170), Expect = 3.7e-09 Identity = 40/75 (53.33%), Postives = 46/75 (61.33%), Query Frame = 1
BLAST of CmoCh19G003500 vs. NCBI nr
Match: gi|1002166123|ref|YP_009236244.1| (50S ribosomal protein L23 (chloroplast) [Bletilla ochracea]) HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06 Identity = 36/75 (48.00%), Postives = 36/75 (48.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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