CmoCh19G003220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G003220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr19 : 2482387 .. 2483683 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGGGATTACTTTGAAAGTTCAAAACAAGGAAAAACTTCCATTGATGATGCCAAAGATGATCTCAAAAGATTATAGTTACTGAAAATGGAATCTAATTCTACATGTATAAGTGTATTAATAATGGGAAAAAAAAAATACATGAGGGTGAAGGAGACATTCTAGCCAATGGGATTTGTAATCTAATTCTACATGTATAAGATTTGTTGTCATCCAATGGAATGAATTTCAAAGGATATATATCTTAATGCTTTGGTACCGAGAAAACTTACACAAATTTTTAAAATTAAGTTAATATTCCTATTTTAATATAGATGACAAAGAAAAGGATTTTCTTGCATTTTGATCTTAGTAAGGTCATTAAAATAATGCTAACAATTACCATAATGTTTATTATTAATATATAACTTAAAGAAGTTACATTGATGTTGTAGTAGTTCATATGATAAGGTTTGAAAACATAAGTTCAAACAATTAAAATTTCAATGTGGAGATAAAGATGGTGGTTTTTCAGTGCAAACTCGTGAAACACTAGTAACACTAGTACTTTGATGGTAGAGGAGGTGAACCAACAAGTGGAACTTTGAGAGGAGCAGTCCCTGGAATACAAGGATGACAATGGTGAAGCAATGGGTGGATTGTTAGGGCGAGGTGGCAAAACTATTGATGGAATGGTTGGACGAGGAGACTAAGCAGTTGATAGAATAAATTGATAAGGGTGTGAAGCCATTGGTGGAATGCTACGGCGAGGTGGTGAAGCTATTGGTGGAATGATTGGACCAGGTGGCGATGCTATCGGTGGAATGATTGGACGAGGTGGTGAAGCCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGACTGCTTGGACGAGGAGGTGATGCTGTCGGTGGAATGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCAAAGCCATTGGTGGACTGCTTGGACGAGGAGGTGATGCTGTCGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATTATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTGGACGAGGGGGTGATGCTGTCGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTGGGTGA

mRNA sequence

GGTGGGATTACTTTGAAAGTTCAAAACAAGGAAAAACTTCCATTGATGATGCCAAAGATGATCTCAAAAGATTATAGGTGTGAAGCCATTGGTGGAATGCTACGGCGAGGTGGTGAAGCTATTGGTGGAATGATTGGACCAGGTGGCGATGCTATCGGTGGAATGATTGGACGAGGTGGTGAAGCCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGACTGCTTGGACGAGGAGGTGATGCTGTCGGTGGAATGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCAAAGCCATTGGTGGACTGCTTGGACGAGGAGGTGATGCTGTCGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATTATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTGGACGAGGGGGTGATGCTGTCGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTGGGTGA

Coding sequence (CDS)

GGTGGGATTACTTTGAAAGTTCAAAACAAGGAAAAACTTCCATTGATGATGCCAAAGATGATCTCAAAAGATTATAGGTGTGAAGCCATTGGTGGAATGCTACGGCGAGGTGGTGAAGCTATTGGTGGAATGATTGGACCAGGTGGCGATGCTATCGGTGGAATGATTGGACGAGGTGGTGAAGCCATTGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGACTGCTTGGACGAGGAGGTGATGCTGTCGGTGGAATGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCAAAGCCATTGGTGGACTGCTTGGACGAGGAGGTGATGCTGTCGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATTATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTGGACGAGGGGGTGATGCTGTCGGTGGAACGATTGGACGAGGTGGTGAGGCCATGGGTGGAATGTTAGGGCGAGGTGGCAAAGTTGGCGAAATGATGGGACGAGGGGGCGAAGCCATTGGTGGAATGCTTGGGTGA

Homology

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BLAST of CmoCh19G003220 vs. TrEMBL
Match: A0A0A0KHS4_CUCSA (Pollen coat oleosin-glycine rich protein OS=Cucumis sativus GN=Csa_6G416850 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.9e-41
Identity = 116/194 (59.79%), Postives = 153/194 (78.87%), Query Frame = 1


Query: 29  AIGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGK-VGEMMGRGGEAIGGL 88
           A+G +L RGGE +G  +G GG AIG + GRGG A+G +LGRGG+ +GE MGRGG+AIG +
Sbjct: 106 AMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEI 165

Query: 89  LGRGGDAVGGMIGRGGEAMGGMLGRGGK-VGEMMGRGGKAIGGLLGRGGDAVGGTIGRGG 148
            GRGG A+G M+GRGGE +G  +GRGGK +GE+ GRGG+A+G +LGRGG+ +G T+GRGG
Sbjct: 166 FGRGGRAMGEMLGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGETMGRGG 225

Query: 149 EAMGGMLGRGGK-VGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGK-VGE 208
           +A+G + GRGG+ +GEI+GRGGE +G  +GRGG A+G   GRGG AMG +LGRGG+ +GE
Sbjct: 226 KAIGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGE 285

Query: 209 MMGRGGEAIGGMLG 219
            MGRGG+AIG + G
Sbjct: 286 TMGRGGKAIGEIFG 299

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BLAST of CmoCh19G003220 vs. TrEMBL
Match: Q9LW52_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At3g23450 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.5e-17
Identity = 95/189 (50.26%), Postives = 133/189 (70.37%), Query Frame = 1


Query: 30  IGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLG 89
           +GG + +GG  IGG IG GG  +GG IG+GG  IGG +G+GG +G  +G+GG  IGG +G
Sbjct: 140 VGGGIGKGG-GIGGGIGKGG-GVGGGIGKGG-GIGGGIGKGGGIGGGIGKGG-GIGGGIG 199

Query: 90  RGGDAVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAM 149
           +GG  +GG IG+GG  +GG  G+GG VG  +G+GG  +GG  G+GG  VGG IG+GG  +
Sbjct: 200 KGG-GIGGGIGKGG-GVGGGFGKGGGVGGGIGKGG-GVGGGFGKGG-GVGGGIGKGG-GI 259

Query: 150 GGMLGRGGKVGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKVGEMMGRG 209
           GG +G+GG +G  +G+GG  IGG +G+GG  +GG IG+GG  +GG +G+GG +G  +G+G
Sbjct: 260 GGGIGKGGGIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGGGIGGGIGKG 315

Query: 210 GEAIGGMLG 219
           G  IGG +G
Sbjct: 320 G-GIGGGIG 315

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BLAST of CmoCh19G003220 vs. TrEMBL
Match: A0A091DH58_FUKDA (Long palate, lung and nasal epithelium carcinoma-associated protein 4 OS=Fukomys damarensis GN=H920_07116 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-16
Identity = 83/182 (45.60%), Postives = 113/182 (62.09%), Query Frame = 1


Query: 37  GGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLGRGGDAVG 96
           GG  +GG++G  G   GG  G  G  +GG  G GG  G+++G      GGLLG  G + G
Sbjct: 467 GGPLLGGLLGGSGSGGGGNSGLLGGLLGGGGGEGG--GDLLG------GGLLGGSGSSGG 526

Query: 97  GMIGRGGEAMGGMLGRGGKV-GEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAMGGMLGR 156
           G++G GG + GG+LG GG   G ++G GG + GGLLG GG + GG +G GG + GG+LG 
Sbjct: 527 GLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGD 586

Query: 157 GGKV-GEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKV-GEMMGRGGEAI 216
           GG   G ++G GG + GG+LG GG + GG +G GG + GG+LG GG   G ++G GG  +
Sbjct: 587 GGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGGLL 640

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BLAST of CmoCh19G003220 vs. TrEMBL
Match: E6V457_VARPE (Uncharacterized protein OS=Variovorax paradoxus (strain EPS) GN=Varpa_5091 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 80/189 (42.33%), Postives = 118/189 (62.43%), Query Frame = 1


Query: 30  IGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLG 89
           +GG+L   G  +GG++G  G  +GG++G  G  +GG+LG  G +G ++G  G  +GG+LG
Sbjct: 676 LGGVLGGEGGLLGGLLGDDG-LLGGVLGGDGGLLGGVLGDDGLLGGVLGGEGGLLGGVLG 735

Query: 90  RGGDAVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAM 149
            GG  VGG++G  G  +G ++G  G VG ++G  G  +GG+LG  G  VGG +G  G  +
Sbjct: 736 EGG-IVGGLLGGDGGLLGVVIGENGIVGGLLGGDGGLLGGVLGEDG-IVGGLLGGDGGLL 795

Query: 150 GGMLGRGGKVGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKVGEMMGRG 209
           GG+LG  G VG ++G  G  +GG+LG  G  VGG +G  G  +GG+LG  G VG ++G  
Sbjct: 796 GGVLGEDGIVGGLLGGDGGLLGGVLGENG-IVGGLLGGDGGLLGGVLGENGIVGGLLGGD 855

Query: 210 GEAIGGMLG 219
           G  +GG+LG
Sbjct: 856 GGLLGGVLG 860

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BLAST of CmoCh19G003220 vs. TrEMBL
Match: M4E4M1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 91/188 (48.40%), Postives = 125/188 (66.49%), Query Frame = 1


Query: 31  GGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLGR 90
           GG + +GG  +GG IG GG  +GG IG+GG  IGG +G+GG  G   G+GG  IGG +G+
Sbjct: 139 GGGIGKGG-GLGGGIGKGG-GVGGGIGKGG-GIGGGIGKGGGFGGGYGKGG-GIGGGIGK 198

Query: 91  GGDAVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAMG 150
           G   VGG IG+GGE +GG +G+GG +G  +G+GG  +GG +G+GG  VGG  G+GG  +G
Sbjct: 199 GR-GVGGGIGKGGE-VGGGIGKGGGIGGGIGKGG-GVGGGIGKGG-GVGGGFGKGG-GVG 258

Query: 151 GMLGRGGKVGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKVGEMMGRGG 210
           G +G+GG +G  +G+GG    G   RGG+  GG IG GG   GG +G+GG +G  +G+GG
Sbjct: 259 GGIGKGGGIGGGIGKGGGIGKGRGIRGGNGKGGGIGDGGFGKGGGIGKGGGIGGGIGKGG 316

Query: 211 EAIGGMLG 219
             IGG +G
Sbjct: 319 -GIGGGIG 316

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BLAST of CmoCh19G003220 vs. TAIR10
Match: AT3G23450.1 (AT3G23450.1 unknown protein)

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-20
Identity = 95/189 (50.26%), Postives = 133/189 (70.37%), Query Frame = 1


Query: 30  IGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLG 89
           +GG + +GG  IGG IG GG  +GG IG+GG  IGG +G+GG +G  +G+GG  IGG +G
Sbjct: 140 VGGGIGKGG-GIGGGIGKGG-GVGGGIGKGG-GIGGGIGKGGGIGGGIGKGG-GIGGGIG 199

Query: 90  RGGDAVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAM 149
           +GG  +GG IG+GG  +GG  G+GG VG  +G+GG  +GG  G+GG  VGG IG+GG  +
Sbjct: 200 KGG-GIGGGIGKGG-GVGGGFGKGGGVGGGIGKGG-GVGGGFGKGG-GVGGGIGKGG-GI 259

Query: 150 GGMLGRGGKVGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKVGEMMGRG 209
           GG +G+GG +G  +G+GG  IGG +G+GG  +GG IG+GG  +GG +G+GG +G  +G+G
Sbjct: 260 GGGIGKGGGIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGGGIGGGIGKG 315

Query: 210 GEAIGGMLG 219
           G  IGG +G
Sbjct: 320 G-GIGGGIG 315

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BLAST of CmoCh19G003220 vs. TAIR10
Match: AT4G01985.1 (AT4G01985.1 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-08
Identity = 88/201 (43.78%), Postives = 105/201 (52.24%), Query Frame = 1


Query: 30  IGGMLRRGGEAIGGMIGPGG---DAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGG 89
           +GG +  GG A GG +G GG      GG +G GG   GG  G GG VG   GRG     G
Sbjct: 175 VGGGVGAGGGA-GGSVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAG-GRGSGGASG 234

Query: 90  LLGRGGDAVG---GMIGRGGEAMGGML---GRGGKVGEMMGRGGKAIGGLLGRGGDAVGG 149
            +G GG A G   G +G GG   GG+    G GG VG   G GG   GG+ G  G +VGG
Sbjct: 235 GVGVGGGAGGSGGGSVGGGGRGSGGVGASGGAGGNVGAGGGLGGGVGGGVGGGVGGSVGG 294

Query: 150 TIGRG-GEAMGGMLGRGGKVGEIMGRG-GEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGR 209
            +G   G A+GG  G GG VG   GRG G A GG  G      GG++G GG   GG+   
Sbjct: 295 AVGGAVGGAVGG--GGGGSVGG-GGRGSGGASGGASGGASGGAGGSVGAGGGVGGGV--- 354

Query: 210 GGKVGEMMGRG-GEAIGGMLG 219
           GG VG  +G G G A+GG +G
Sbjct: 355 GGGVGGGVGGGVGGAVGGAVG 367

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BLAST of CmoCh19G003220 vs. TAIR10
Match: AT2G05580.1 (AT2G05580.1 Glycine-rich protein family)

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-07
Identity = 84/194 (43.30%), Postives = 104/194 (53.61%), Query Frame = 1


Query: 31  GGMLR-RGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLG 90
           GG+ R +GG+  GG  G GG   GG  G+GG+  GG  G+GG+ G   G+GG+  GG  G
Sbjct: 78  GGIGRGQGGQKGGGGGGQGGQKGGGGGGQGGQKGGGG-GQGGQKGGGGGQGGQKGGGGGG 137

Query: 91  RGGDAVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLG--RGGDAVGGTIGRGGE 150
           +GG   GG  G+GG+  GG  G+GG+ G   G+GG+  GG  G  +GG   GG  G GG 
Sbjct: 138 QGGQKGGGGGGQGGQKGGGGGGQGGQKGG-GGQGGQKGGGGQGGQKGGGGQGGQKGGGGR 197

Query: 151 AMGGML--GRGGKVGEIMGRGGEAIGGML-GRGGDAVGGTIGRGGEAMGG---MLGRGGK 210
             GGM   G GG+ G   G GG   GG   G GG   GG  G GG   GG     G GG+
Sbjct: 198 GQGGMKGGGGGGQGGHKGGGGGGGQGGHKGGGGGGGQGGHKGGGGGGQGGGGHKGGGGGQ 257

Query: 211 VGEMMGRGGEAIGG 216
            G   G GG  +GG
Sbjct: 258 GGHKGGGGGGHVGG 269

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BLAST of CmoCh19G003220 vs. NCBI nr
Match: gi|778722303|ref|XP_011658456.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 116/194 (59.79%), Postives = 153/194 (78.87%), Query Frame = 1


Query: 29  AIGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGK-VGEMMGRGGEAIGGL 88
           A+G +L RGGE +G  +G GG AIG + GRGG A+G +LGRGG+ +GE MGRGG+AIG +
Sbjct: 106 AMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEI 165

Query: 89  LGRGGDAVGGMIGRGGEAMGGMLGRGGK-VGEMMGRGGKAIGGLLGRGGDAVGGTIGRGG 148
            GRGG A+G M+GRGGE +G  +GRGGK +GE+ GRGG+A+G +LGRGG+ +G T+GRGG
Sbjct: 166 FGRGGRAMGEMLGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGETMGRGG 225

Query: 149 EAMGGMLGRGGK-VGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGK-VGE 208
           +A+G + GRGG+ +GEI+GRGGE +G  +GRGG A+G   GRGG AMG +LGRGG+ +GE
Sbjct: 226 KAIGEIFGRGGRAMGEILGRGGETLGETMGRGGKAIGEIFGRGGRAMGEILGRGGETLGE 285

Query: 209 MMGRGGEAIGGMLG 219
            MGRGG+AIG + G
Sbjct: 286 TMGRGGKAIGEIFG 299

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BLAST of CmoCh19G003220 vs. NCBI nr
Match: gi|15229448|ref|NP_188987.1| (uncharacterized protein [Arabidopsis thaliana])

HSP 1 Score: 95.9 bits (237), Expect = 9.3e-17
Identity = 95/189 (50.26%), Postives = 133/189 (70.37%), Query Frame = 1


Query: 30  IGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLG 89
           +GG + +GG  IGG IG GG  +GG IG+GG  IGG +G+GG +G  +G+GG  IGG +G
Sbjct: 140 VGGGIGKGG-GIGGGIGKGG-GVGGGIGKGG-GIGGGIGKGGGIGGGIGKGG-GIGGGIG 199

Query: 90  RGGDAVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAM 149
           +GG  +GG IG+GG  +GG  G+GG VG  +G+GG  +GG  G+GG  VGG IG+GG  +
Sbjct: 200 KGG-GIGGGIGKGG-GVGGGFGKGGGVGGGIGKGG-GVGGGFGKGG-GVGGGIGKGG-GI 259

Query: 150 GGMLGRGGKVGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKVGEMMGRG 209
           GG +G+GG +G  +G+GG  IGG +G+GG  +GG IG+GG  +GG +G+GG +G  +G+G
Sbjct: 260 GGGIGKGGGIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGG-GIGGGIGKGGGIGGGIGKG 315

Query: 210 GEAIGGMLG 219
           G  IGG +G
Sbjct: 320 G-GIGGGIG 315

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BLAST of CmoCh19G003220 vs. NCBI nr
Match: gi|923734780|ref|XP_013669370.1| (PREDICTED: glycine-rich cell wall structural protein-like [Brassica napus])

HSP 1 Score: 94.7 bits (234), Expect = 2.1e-16
Identity = 96/194 (49.48%), Postives = 133/194 (68.56%), Query Frame = 1


Query: 30  IGGMLRRGGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLG 89
           +GG + +GG  IGG IG GG  +GG IG+GG  +GG  G+GG VG  +G+GG  IGG +G
Sbjct: 210 VGGGIGKGG-GIGGGIGKGG-GVGGGIGKGG-GVGGGFGKGGGVGGGIGKGG-GIGGGIG 269

Query: 90  RGGD-----AVGGMIGRGGEAMGGMLGRGGKVGEMMGRGGKAIGGLLGRGGDAVGGTIGR 149
           +GG       VGG IG+GG  +GG +G+GG +G  +G+GG  +GG  G+GG  +GG IG+
Sbjct: 270 KGGGIGKGGGVGGGIGKGG-GVGGGIGKGGGIGGGIGKGG-GVGGGYGKGG-GIGGGIGK 329

Query: 150 GGEAMGGMLGRGGKVGEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKVGE 209
           GG  +GG +G+GG VG  +G+GG  IGG +G+GG  VGG+IG+GG  +GG +G+GG +G 
Sbjct: 330 GG-GVGGGIGKGGGVGGGIGKGG-GIGGGIGKGG-GVGGSIGKGG-GVGGGIGKGGGIGA 389

Query: 210 MMGRGGEAIGGMLG 219
            +G GG  IGG +G
Sbjct: 390 GIGNGG-GIGGGIG 391

[Close]

BLAST of CmoCh19G003220 vs. NCBI nr
Match: gi|676277326|gb|KFO31474.1| (Long palate, lung and nasal epithelium carcinoma-associated protein 4 [Fukomys damarensis])

HSP 1 Score: 94.4 bits (233), Expect = 2.7e-16
Identity = 83/182 (45.60%), Postives = 113/182 (62.09%), Query Frame = 1


Query: 37  GGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGKVGEMMGRGGEAIGGLLGRGGDAVG 96
           GG  +GG++G  G   GG  G  G  +GG  G GG  G+++G      GGLLG  G + G
Sbjct: 467 GGPLLGGLLGGSGSGGGGNSGLLGGLLGGGGGEGG--GDLLG------GGLLGGSGSSGG 526

Query: 97  GMIGRGGEAMGGMLGRGGKV-GEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAMGGMLGR 156
           G++G GG + GG+LG GG   G ++G GG + GGLLG GG + GG +G GG + GG+LG 
Sbjct: 527 GLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGD 586

Query: 157 GGKV-GEIMGRGGEAIGGMLGRGGDAVGGTIGRGGEAMGGMLGRGGKV-GEMMGRGGEAI 216
           GG   G ++G GG + GG+LG GG + GG +G GG + GG+LG GG   G ++G GG  +
Sbjct: 587 GGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGSSHGGLLGDGGSSGGGLLGGGGGLL 640

[Close]

BLAST of CmoCh19G003220 vs. NCBI nr
Match: gi|1011258286|ref|WP_062177236.1| (MULTISPECIES: hypothetical protein [Bacillales])

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-16
Identity = 86/183 (46.99%), Postives = 110/183 (60.11%), Query Frame = 1


Query: 37  GGEAIGGMIGPGGDAIGGMIGRGGEAIGGMLGRGGK-VGEMMGRGGEAIGGLLGRGGDAV 96
           GG+ +GGM G GG  +GG  G GG+ +GGM G GG+ VG   G GG+ +GG+ G GG  V
Sbjct: 517 GGQPVGGMPGYGGQPVGGNPGYGGQPVGGMPGYGGQPVGGNPGYGGQPVGGMPGYGGQPV 576

Query: 97  GGMIGRGGEAMGGMLGRGGK-VGEMMGRGGKAIGGLLGRGGDAVGGTIGRGGEAMGGMLG 156
           GG  G GG+ +GGM G GG+ VG M G GG+ +GG+ G GG  VGG  G GG+ +GGM G
Sbjct: 577 GGNPGYGGQPVGGMPGYGGQPVGGMPGYGGQPVGGMPGYGGQPVGGMPGYGGQPVGGMPG 636

Query: 157 RGGK-VGEIMGRGGEAIGGMLGRGGD-AVGGTIGRGGE-------AMGGMLGRGGKVGEM 209
            GG+ VG + G GG+ +GGM G GG  +  G  G  G+         GG  G GG+   M
Sbjct: 637 YGGQPVGGMPGYGGQPVGGMPGYGGQPSFSGQPGPSGQPGPSGQLGFGGYPGYGGQPDIM 696

The following BLAST results are available for this feature:

BLAST of CmoCh19G003220 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh19G003220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHS4_CUCSA	2.9e-41	59.79	Pollen coat oleosin-glycine rich protein OS=Cucumis sativus GN=Csa_6G416850 PE=4...	[more]
Q9LW52_ARATH	6.5e-17	50.26	Uncharacterized protein OS=Arabidopsis thaliana GN=At3g23450 PE=4 SV=1	[more]
A0A091DH58_FUKDA	1.9e-16	45.60	Long palate, lung and nasal epithelium carcinoma-associated protein 4 OS=Fukomys...	[more]
E6V457_VARPE	1.2e-15	42.33	Uncharacterized protein OS=Variovorax paradoxus (strain EPS) GN=Varpa_5091 PE=4 ...	[more]
M4E4M1_BRARP	1.0e-14	48.40	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of CmoCh19G003220 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23450.1	3.3e-20	50.26	unknown protein	[more]
AT4G01985.1	6.4e-08	43.78	unknown protein	[more]
AT2G05580.1	2.4e-07	43.30	Glycine-rich protein family	[more]

BLAST of CmoCh19G003220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722303\|ref\|XP_011658456.1\|	4.1e-41	59.79	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis sativus]	[more]
gi\|15229448\|ref\|NP_188987.1\|	9.3e-17	50.26	uncharacterized protein [Arabidopsis thaliana]	[more]
gi\|923734780\|ref\|XP_013669370.1\|	2.1e-16	49.48	PREDICTED: glycine-rich cell wall structural protein-like [Brassica napus]	[more]
gi\|676277326\|gb\|KFO31474.1\|	2.7e-16	45.60	Long palate, lung and nasal epithelium carcinoma-associated protein 4 [Fukomys d...	[more]
gi\|1011258286\|ref\|WP_062177236.1\|	3.5e-16	46.99	MULTISPECIES: hypothetical protein [Bacillales]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003220.1	CmoCh19G003220.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G003220	Csa6G416850	Cucumber (Chinese Long) v2	cmocuB515
CmoCh19G003220	MELO3C014373	Melon (DHL92) v3.5.1	cmomeB470
CmoCh19G003220	CSPI06G22330	Wild cucumber (PI 183967)	cmocpiB522
CmoCh19G003220	CsaV3_6G037440	Cucumber (Chinese Long) v3	cmocucB0619
CmoCh19G003220	Carg24594	Silver-seed gourd	carcmoB0890
CmoCh19G003220	Carg24007	Silver-seed gourd	carcmoB1001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G003220	Watermelon (97103) v2	cmowmbB532
CmoCh19G003220	Wax gourd	cmowgoB0656
CmoCh19G003220	Cucurbita moschata (Rifu)	cmocmoB109
CmoCh19G003220	Cucumber (Gy14) v1	cgycmoB0528
CmoCh19G003220	Cucurbita maxima (Rimu)	cmacmoB147
CmoCh19G003220	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G003220	Watermelon (Charleston Gray)	cmowcgB442
CmoCh19G003220	Watermelon (97103) v1	cmowmB467
CmoCh19G003220	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G003220	Cucurbita pepo (Zucchini)	cmocpeB493
CmoCh19G003220	Bottle gourd (USVL1VR-Ls)	cmolsiB466
CmoCh19G003220	Cucumber (Gy14) v2	cgybcmoB764
CmoCh19G003220	Melon (DHL92) v3.6.1	cmomedB542