CmoCh18G013120 (gene) Cucurbita moschata (Rifu)

NameCmoCh18G013120
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionABC transporter family protein
LocationCmo_Chr18 : 12528364 .. 12530111 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGGCAGGCATAGAGAAAAGATTCGGTCTATTCGCGTTCACACTAACCTTCCTGCTCTCATCCACCACCGAAGCACTCCCGATCTTCCTGAACGAACGCCCCATCCTCCTCCGCGAAACCTCCGGCGGCGTCTACCGTCTCTCCTCCTACATAATCGCCAACACCCTCGTGTTCCTCCCCGACCTCCTCGCCATCGCCGTGATCTACTCCGTCTCGGTCTACTTCCTGGTGGGGCTGTGCGCCACGTGGCAAGCCTTCGCATACTTCGTCCTCGTCGTCTGGGTCATCATTCTGATGGGCAACTCATTCGTGATCTTCCTCAGCTCCCTGGCTCCGAACTTCATCGCCGGCTCGTCGCTGGTGACGGTTCTGCTGGCCGGGTTTTTCCTCTTCAGCGGGTACTTCATTTCTGAGGAGAGCATGCCCAGGATGTGGGTGTTCATGCACTTGTTGTCCATGTACAAGTACGCGCTGGACGCGCTGCTCATAAACGAGTACACGTGTCTGGTTTTCTCGGTGCTTTGTTTGGTTGGAGGAGCGGGAGAAGGAGTGTTTGGTTACGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATGTGTTGGAGAAGAGAGAGGGCTGGACGAGACGCAGCGGTGGAGGAATGTTTACATGCTTTGGTGGGGTTTTTTGTGTTCTATCGTCTTCTTTGTTTGGTTGTTTTGATTAGAAGGGTTTCCAGGTCTAACAAATGATTTCAATGTTTAGCAAAAGTCTCTATTTCGAGGCCCAAAGGCCCAAATATAAGCCCATTCCATTATTCTATATTTTGGTAGTCACTAAAAATAATTAGATGTAATGGAGGCATTTCTCAATCAATTTCTGAATACAAACATAGAGTTGCAAACGCAAGAAAATAAGCAAACACTTGGTTGTTGGTTTTACAGAAATCATCGTAGACAAAACCAAAACTGCAAACTGATAAGAAATCATTAAGCATCATCAACAAACCAATGGGAAATATTATGCTCTCTCTTCTCATCAGATCTCCCATTTCTTCAACTCCATACCATCTGGAGGGCTACCTTCCACCTTCTTCGTCCCGACCTCCTTCCAGTTCGTGGACAGGACCGTGCCATTCGACTCCACCTTAAACCCAAAGCAAATCAGCCAATTCAATCAATAA

mRNA sequence

ATGGATAAGGCAGGCATAGAGAAAAGATTCGGTCTATTCGCGTTCACACTAACCTTCCTGCTCTCATCCACCACCGAAGCACTCCCGATCTTCCTGAACGAACGCCCCATCCTCCTCCGCGAAACCTCCGGCGGCGTCTACCGTCTCTCCTCCTACATAATCGCCAACACCCTCGTGTTCCTCCCCGACCTCCTCGCCATCGCCGTGATCTACTCCGTCTCGGTCTACTTCCTGGTGGGGCTGTGCGCCACGTGGCAAGCCTTCGCATACTTCGTCCTCGTCGTCTGGGTCATCATTCTGATGGGCAACTCATTCGTGATCTTCCTCAGCTCCCTGGCTCCGAACTTCATCGCCGGCTCGTCGCTGGTGACGGTTCTGCTGGCCGGGTTTTTCCTCTTCAGCGGGTACTTCATTTCTGAGGAGAGCATGCCCAGGATGTGGGTGTTCATGCACTTGTTGTCCATGTACAAGTACGCGCTGGACGCGCTGCTCATAAACGAGTACACGTGTCTGATCTCCCATTTCTTCAACTCCATACCATCTGGAGGGCTACCTTCCACCTTCTTCGTCCCGACCTCCTTCCAGTTCGTGGACAGGACCGTGCCATTCGACTCCACCTTAAACCCAAAGCAAATCAGCCAATTCAATCAATAA

Coding sequence (CDS)

ATGGATAAGGCAGGCATAGAGAAAAGATTCGGTCTATTCGCGTTCACACTAACCTTCCTGCTCTCATCCACCACCGAAGCACTCCCGATCTTCCTGAACGAACGCCCCATCCTCCTCCGCGAAACCTCCGGCGGCGTCTACCGTCTCTCCTCCTACATAATCGCCAACACCCTCGTGTTCCTCCCCGACCTCCTCGCCATCGCCGTGATCTACTCCGTCTCGGTCTACTTCCTGGTGGGGCTGTGCGCCACGTGGCAAGCCTTCGCATACTTCGTCCTCGTCGTCTGGGTCATCATTCTGATGGGCAACTCATTCGTGATCTTCCTCAGCTCCCTGGCTCCGAACTTCATCGCCGGCTCGTCGCTGGTGACGGTTCTGCTGGCCGGGTTTTTCCTCTTCAGCGGGTACTTCATTTCTGAGGAGAGCATGCCCAGGATGTGGGTGTTCATGCACTTGTTGTCCATGTACAAGTACGCGCTGGACGCGCTGCTCATAAACGAGTACACGTGTCTGATCTCCCATTTCTTCAACTCCATACCATCTGGAGGGCTACCTTCCACCTTCTTCGTCCCGACCTCCTTCCAGTTCGTGGACAGGACCGTGCCATTCGACTCCACCTTAAACCCAAAGCAAATCAGCCAATTCAATCAATAA
BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71
Identity = 136/171 (79.53%), Postives = 157/171 (91.81%), Query Frame = 1

Query: 3   KAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLP 62
           KAGIEKRFG+FAFTLTFLLSSTTE LPIF+NERPILLRETS G+YRLSS+I+ANTLVFLP
Sbjct: 356 KAGIEKRFGMFAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHILANTLVFLP 415

Query: 63  DLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSL 122
            L  I++IYSVSVYFL+GLC TWQAF YFVLV+W+I+LM NSFV+FLSSLAPN+I G+SL
Sbjct: 416 YLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSL 475

Query: 123 VTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           VT+LLA FFLFSGYFIS+ES+P+ W+FM+  SMYKYALDALLINEY+CL S
Sbjct: 476 VTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCLAS 526

BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-68
Identity = 133/169 (78.70%), Postives = 155/169 (91.72%), Query Frame = 1

Query: 3   KAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLP 62
           K GI KRFGLFAFTLTFLLSSTT+ LPIF++ERPILLRETS G+YRLSS+I+ANTLVFLP
Sbjct: 344 KEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLP 403

Query: 63  DLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSL 122
            LL IA+IYSVS+YFLVGLC +WQA AYFVLV+W+I+LM NSFV+FLSSLAPN+IAG+S 
Sbjct: 404 YLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSS 463

Query: 123 VTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCL 172
           VT+LLA FFLFSGYFIS+ES+P+ W+FM+  SMYKYALDALLINEY+CL
Sbjct: 464 VTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCL 512

BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-47
Identity = 92/177 (51.98%), Postives = 143/177 (80.79%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           D+ G+ +R GLFAF+L+FLLSST EALPI+L ER +L++E+S G YR+SSY+IANT+ F+
Sbjct: 394 DEEGVAERLGLFAFSLSFLLSSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFV 453

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P L  +++++S+ VY++VGL  + QAF++FVL VW+IILM +S V+FLS+++P+FI+G+S
Sbjct: 454 PFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNS 513

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFFNS 179
           L+  +L  FFLFSGYFI +E +P+ W+FM+ +S+Y+Y L+++++NEY  +    F+S
Sbjct: 514 LICTVLGAFFLFSGYFIPKEKIPKPWMFMYYVSLYRYPLESMVVNEYWSMREECFSS 570

BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           D  G  +R GLFAF LTFLL+ST EALPIFL ER IL++ETS G YR+SSY +AN LV+L
Sbjct: 415 DLKGARERVGLFAFILTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYL 474

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LL +A+++S  VY+LVGL  ++ AF +F L++W+I+   NS V+  S+L PNFI G+S
Sbjct: 475 PFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNS 534

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYT 170
           +++ ++  FFLFSGYFIS   +P  W+FMH +S++KY  +  LINE++
Sbjct: 535 VISGVMGSFFLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLINEFS 582

BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-42
Identity = 89/160 (55.62%), Postives = 121/160 (75.62%), Query Frame = 1

Query: 9   RFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLPDLLAIA 68
           R G FAF LTFLLSSTTE LPIFL +R IL+RETS   YR+ SY++A+TL+F+P LL I+
Sbjct: 384 RTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPFLLIIS 443

Query: 69  VIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSLVTVLLA 128
           ++++  VY+LVGL      F YF LV+W+++LM NSFV   S+L PNFI G+S+++ L+ 
Sbjct: 444 MLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMG 503

Query: 129 GFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEY 169
            FFLFSGYFI+++ +P  W FMH LS++KY  + L+INEY
Sbjct: 504 SFFLFSGYFIAKDRIPVYWEFMHYLSLFKYPFECLMINEY 543

BLAST of CmoCh18G013120 vs. TrEMBL
Match: A0A0A0L9Y5_CUCSA (White-brown-complex ABC transporter family OS=Cucumis sativus GN=Csa_3G184580 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.0e-75
Identity = 152/176 (86.36%), Postives = 166/176 (94.32%), Query Frame = 1

Query: 1   MDKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVF 60
           MDKAGIEKRFGLFAFTLTFLLSSTTE LPIFLNERPILLRETS G+YRLSSYIIANTLVF
Sbjct: 373 MDKAGIEKRFGLFAFTLTFLLSSTTETLPIFLNERPILLRETSSGLYRLSSYIIANTLVF 432

Query: 61  LPDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGS 120
           LP LLAIA+IYS SVYFLVGLCATWQAFAYFVLV+WVIILM NSFV+FLSSLAPN+IAG+
Sbjct: 433 LPYLLAIALIYSASVYFLVGLCATWQAFAYFVLVIWVIILMANSFVLFLSSLAPNYIAGT 492

Query: 121 SLVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFF 177
           SLVTVLLA FFLFSGYFIS+ES+P+ W+FM+ +SMYKYALDALLINEY+CL+S  F
Sbjct: 493 SLVTVLLAAFFLFSGYFISQESLPKFWMFMNFMSMYKYALDALLINEYSCLVSRCF 548

BLAST of CmoCh18G013120 vs. TrEMBL
Match: A0A022QD20_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a003070mg PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74
Identity = 146/172 (84.88%), Postives = 165/172 (95.93%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           DK+GIEKR GLFAFTLTFLLSSTTE LPIF+NERPILLRETS GVYRLSSY++ANTLVF+
Sbjct: 377 DKSGIEKRLGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLMANTLVFM 436

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LLAIAV+YSVSVYFLVGLCATWQAFAYFVLV+WVI+LM NSFV+FLSS+APN+IAG+S
Sbjct: 437 PYLLAIAVVYSVSVYFLVGLCATWQAFAYFVLVIWVIVLMANSFVLFLSSVAPNYIAGTS 496

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           LVTVLLAGFFLFSGYFIS+ES+P+ W+FMH LSMYKYALDA+LINEY+CL+S
Sbjct: 497 LVTVLLAGFFLFSGYFISKESLPKFWLFMHYLSMYKYALDAMLINEYSCLVS 548

BLAST of CmoCh18G013120 vs. TrEMBL
Match: M5XTD4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017858mg PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74
Identity = 146/172 (84.88%), Postives = 163/172 (94.77%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           DK GIEKRFGLFAFTLTFLLSSTTE LPIF+NERPILLRETSGG+YRLSSY+IANTLVFL
Sbjct: 372 DKQGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSGGIYRLSSYLIANTLVFL 431

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LLAIA+IYSVSVYFLVGLCA+WQAFAYFVLV+WVI+LM NSFV+FLSSLAPN+IAG+S
Sbjct: 432 PYLLAIAIIYSVSVYFLVGLCASWQAFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTS 491

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           LVT+LL GFFLFSGYFIS+++MP+ W+FMH  SMYKYALDALLINEY CL+S
Sbjct: 492 LVTILLGGFFLFSGYFISKDNMPKYWLFMHFFSMYKYALDALLINEYGCLVS 543

BLAST of CmoCh18G013120 vs. TrEMBL
Match: A0A0D2QGS4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G070300 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-74
Identity = 147/175 (84.00%), Postives = 163/175 (93.14%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           DK GIEKRFGLFAFTLTFLLSSTTE LPIFLNERPILLRETS GVYRLSSY+IANTLVFL
Sbjct: 370 DKEGIEKRFGLFAFTLTFLLSSTTETLPIFLNERPILLRETSSGVYRLSSYLIANTLVFL 429

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LLAIAVIYS+SVYFLVGLCA+WQAFAYFVLV+W+I+LM NSFV+FLSSLAPN+IAG+S
Sbjct: 430 PYLLAIAVIYSISVYFLVGLCASWQAFAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTS 489

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFF 177
           LVT+LL  FFLFSGYFIS++SMP+ W+FMH  SMYKYALDALLINEY+CL+S  F
Sbjct: 490 LVTILLGSFFLFSGYFISKDSMPKYWLFMHFFSMYKYALDALLINEYSCLVSRCF 544

BLAST of CmoCh18G013120 vs. TrEMBL
Match: U5FQ57_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0015s05680g PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.8e-74
Identity = 144/174 (82.76%), Postives = 163/174 (93.68%), Query Frame = 1

Query: 3   KAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLP 62
           K GIEKRFGLFAFTLTFLLSSTTE LPIF+NERPILLRETS G+YRLSSY+IANTLVFLP
Sbjct: 375 KQGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGLYRLSSYLIANTLVFLP 434

Query: 63  DLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSL 122
            LLAIA+IYSVS+YF+VGLC TWQAFAYFVLV+WVI+LMGNSFV+FLSSLAPN+IAG+SL
Sbjct: 435 YLLAIAIIYSVSIYFVVGLCGTWQAFAYFVLVIWVIVLMGNSFVLFLSSLAPNYIAGTSL 494

Query: 123 VTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFF 177
           VT+LL GFFLFSGYFIS++SMP+ W+FMH  SMYKYALDALLINEY+CL++  F
Sbjct: 495 VTILLGGFFLFSGYFISQDSMPKYWLFMHFFSMYKYALDALLINEYSCLVNKCF 548

BLAST of CmoCh18G013120 vs. TAIR10
Match: AT5G52860.1 (AT5G52860.1 ABC-2 type transporter family protein)

HSP 1 Score: 270.8 bits (691), Expect = 7.4e-73
Identity = 136/171 (79.53%), Postives = 157/171 (91.81%), Query Frame = 1

Query: 3   KAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLP 62
           KAGIEKRFG+FAFTLTFLLSSTTE LPIF+NERPILLRETS G+YRLSS+I+ANTLVFLP
Sbjct: 356 KAGIEKRFGMFAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHILANTLVFLP 415

Query: 63  DLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSL 122
            L  I++IYSVSVYFL+GLC TWQAF YFVLV+W+I+LM NSFV+FLSSLAPN+I G+SL
Sbjct: 416 YLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSL 475

Query: 123 VTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           VT+LLA FFLFSGYFIS+ES+P+ W+FM+  SMYKYALDALLINEY+CL S
Sbjct: 476 VTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCLAS 526

BLAST of CmoCh18G013120 vs. TAIR10
Match: AT4G25750.1 (AT4G25750.1 ABC-2 type transporter family protein)

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-70
Identity = 133/169 (78.70%), Postives = 155/169 (91.72%), Query Frame = 1

Query: 3   KAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLP 62
           K GI KRFGLFAFTLTFLLSSTT+ LPIF++ERPILLRETS G+YRLSS+I+ANTLVFLP
Sbjct: 344 KEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLP 403

Query: 63  DLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSL 122
            LL IA+IYSVS+YFLVGLC +WQA AYFVLV+W+I+LM NSFV+FLSSLAPN+IAG+S 
Sbjct: 404 YLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSS 463

Query: 123 VTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCL 172
           VT+LLA FFLFSGYFIS+ES+P+ W+FM+  SMYKYALDALLINEY+CL
Sbjct: 464 VTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCL 512

BLAST of CmoCh18G013120 vs. TAIR10
Match: AT5G19410.1 (AT5G19410.1 ABC-2 type transporter family protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48
Identity = 92/177 (51.98%), Postives = 143/177 (80.79%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           D+ G+ +R GLFAF+L+FLLSST EALPI+L ER +L++E+S G YR+SSY+IANT+ F+
Sbjct: 394 DEEGVAERLGLFAFSLSFLLSSTVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFV 453

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P L  +++++S+ VY++VGL  + QAF++FVL VW+IILM +S V+FLS+++P+FI+G+S
Sbjct: 454 PFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNS 513

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFFNS 179
           L+  +L  FFLFSGYFI +E +P+ W+FM+ +S+Y+Y L+++++NEY  +    F+S
Sbjct: 514 LICTVLGAFFLFSGYFIPKEKIPKPWMFMYYVSLYRYPLESMVVNEYWSMREECFSS 570

BLAST of CmoCh18G013120 vs. TAIR10
Match: AT2G13610.1 (AT2G13610.1 ABC-2 type transporter family protein)

HSP 1 Score: 177.9 bits (450), Expect = 6.5e-45
Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           D  G  +R GLFAF LTFLL+ST EALPIFL ER IL++ETS G YR+SSY +AN LV+L
Sbjct: 415 DLKGARERVGLFAFILTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYL 474

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LL +A+++S  VY+LVGL  ++ AF +F L++W+I+   NS V+  S+L PNFI G+S
Sbjct: 475 PFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNS 534

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYT 170
           +++ ++  FFLFSGYFIS   +P  W+FMH +S++KY  +  LINE++
Sbjct: 535 VISGVMGSFFLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLINEFS 582

BLAST of CmoCh18G013120 vs. TAIR10
Match: AT1G53270.1 (AT1G53270.1 ABC-2 type transporter family protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.6e-43
Identity = 89/160 (55.62%), Postives = 121/160 (75.62%), Query Frame = 1

Query: 9   RFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFLPDLLAIA 68
           R G FAF LTFLLSSTTE LPIFL +R IL+RETS   YR+ SY++A+TL+F+P LL I+
Sbjct: 384 RTGFFAFILTFLLSSTTEGLPIFLQDRRILMRETSRRAYRVLSYVLADTLIFIPFLLIIS 443

Query: 69  VIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSSLVTVLLA 128
           ++++  VY+LVGL      F YF LV+W+++LM NSFV   S+L PNFI G+S+++ L+ 
Sbjct: 444 MLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMG 503

Query: 129 GFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEY 169
            FFLFSGYFI+++ +P  W FMH LS++KY  + L+INEY
Sbjct: 504 SFFLFSGYFIAKDRIPVYWEFMHYLSLFKYPFECLMINEY 543

BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|449445969|ref|XP_004140744.1| (PREDICTED: ABC transporter G family member 8 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 152/176 (86.36%), Postives = 166/176 (94.32%), Query Frame = 1

Query: 1   MDKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVF 60
           MDKAGIEKRFGLFAFTLTFLLSSTTE LPIFLNERPILLRETS G+YRLSSYIIANTLVF
Sbjct: 373 MDKAGIEKRFGLFAFTLTFLLSSTTETLPIFLNERPILLRETSSGLYRLSSYIIANTLVF 432

Query: 61  LPDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGS 120
           LP LLAIA+IYS SVYFLVGLCATWQAFAYFVLV+WVIILM NSFV+FLSSLAPN+IAG+
Sbjct: 433 LPYLLAIALIYSASVYFLVGLCATWQAFAYFVLVIWVIILMANSFVLFLSSLAPNYIAGT 492

Query: 121 SLVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFF 177
           SLVTVLLA FFLFSGYFIS+ES+P+ W+FM+ +SMYKYALDALLINEY+CL+S  F
Sbjct: 493 SLVTVLLAAFFLFSGYFISQESLPKFWMFMNFMSMYKYALDALLINEYSCLVSRCF 548

BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|659077622|ref|XP_008439298.1| (PREDICTED: ABC transporter G family member 8 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 152/176 (86.36%), Postives = 166/176 (94.32%), Query Frame = 1

Query: 1   MDKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVF 60
           MDKAGIEKRFGLFAFTLTFLLSSTTE LPIFLNERPILLRETS G+YRLSSYIIANTLVF
Sbjct: 377 MDKAGIEKRFGLFAFTLTFLLSSTTETLPIFLNERPILLRETSSGLYRLSSYIIANTLVF 436

Query: 61  LPDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGS 120
           LP LLAIA+IYS SVYFLVGLCATWQAFAYFVLV+WVIILM NSFV+FLSSLAPN+IAG+
Sbjct: 437 LPYLLAIALIYSASVYFLVGLCATWQAFAYFVLVIWVIILMANSFVLFLSSLAPNYIAGT 496

Query: 121 SLVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLISHFF 177
           SLVTVLLA FFLFSGYFIS+ES+P+ W+FM+ +SMYKYALDALLINEY+CL+S  F
Sbjct: 497 SLVTVLLAAFFLFSGYFISQESLPKFWMFMNFMSMYKYALDALLINEYSCLVSRCF 552

BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|747059406|ref|XP_011076083.1| (PREDICTED: ABC transporter G family member 8-like [Sesamum indicum])

HSP 1 Score: 288.5 bits (737), Expect = 9.7e-75
Identity = 146/172 (84.88%), Postives = 165/172 (95.93%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           DK+GIEKR GLFAFTLTFLLSSTTE LPIF+NERPILLRETS GVYRLSSY++ANTLVFL
Sbjct: 361 DKSGIEKRLGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLMANTLVFL 420

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LLAIA+IYS+SVYFLVGLCATWQAFAYFVLV+WVI+LM NSFV+FLSS+APNFIAG+S
Sbjct: 421 PYLLAIAIIYSISVYFLVGLCATWQAFAYFVLVIWVIVLMANSFVLFLSSIAPNFIAGTS 480

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           L+TVLLAGFFLFSGYFIS+ES+P+ W+FMH LSMYKYALDA+LINEY+CL+S
Sbjct: 481 LLTVLLAGFFLFSGYFISKESLPKFWLFMHYLSMYKYALDAMLINEYSCLVS 532

BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|645258288|ref|XP_008234817.1| (PREDICTED: ABC transporter G family member 4 [Prunus mume])

HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74
Identity = 146/172 (84.88%), Postives = 163/172 (94.77%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           DK GIEKRFGLFAFTLTFLLSSTTE LPIF+NERPILLRETSGG+YRLSSY+IANTLVFL
Sbjct: 375 DKQGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSGGIYRLSSYLIANTLVFL 434

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LLAIA+IYSVSVYFLVGLCA+WQAFAYFVLV+WVI+LM NSFV+FLSSLAPN+IAG+S
Sbjct: 435 PYLLAIAIIYSVSVYFLVGLCASWQAFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTS 494

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           LVT+LL GFFLFSGYFIS+++MP+ W+FMH  SMYKYALDALLINEY CL+S
Sbjct: 495 LVTILLGGFFLFSGYFISKDNMPKYWLFMHFFSMYKYALDALLINEYGCLVS 546

BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|848905573|ref|XP_012852233.1| (PREDICTED: ABC transporter G family member 8 [Erythranthe guttata])

HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74
Identity = 146/172 (84.88%), Postives = 165/172 (95.93%), Query Frame = 1

Query: 2   DKAGIEKRFGLFAFTLTFLLSSTTEALPIFLNERPILLRETSGGVYRLSSYIIANTLVFL 61
           DK+GIEKR GLFAFTLTFLLSSTTE LPIF+NERPILLRETS GVYRLSSY++ANTLVF+
Sbjct: 377 DKSGIEKRLGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLMANTLVFM 436

Query: 62  PDLLAIAVIYSVSVYFLVGLCATWQAFAYFVLVVWVIILMGNSFVIFLSSLAPNFIAGSS 121
           P LLAIAV+YSVSVYFLVGLCATWQAFAYFVLV+WVI+LM NSFV+FLSS+APN+IAG+S
Sbjct: 437 PYLLAIAVVYSVSVYFLVGLCATWQAFAYFVLVIWVIVLMANSFVLFLSSVAPNYIAGTS 496

Query: 122 LVTVLLAGFFLFSGYFISEESMPRMWVFMHLLSMYKYALDALLINEYTCLIS 174
           LVTVLLAGFFLFSGYFIS+ES+P+ W+FMH LSMYKYALDA+LINEY+CL+S
Sbjct: 497 LVTVLLAGFFLFSGYFISKESLPKFWLFMHYLSMYKYALDAMLINEYSCLVS 548

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AB8G_ARATH1.3e-7179.53ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1[more]
AB4G_ARATH1.0e-6878.70ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1[more]
AB23G_ARATH2.9e-4751.98ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1[more]
AB5G_ARATH1.2e-4353.57ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1[more]
AB10G_ARATH2.9e-4255.63ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L9Y5_CUCSA1.0e-7586.36White-brown-complex ABC transporter family OS=Cucumis sativus GN=Csa_3G184580 PE... [more]
A0A022QD20_ERYGU1.2e-7484.88Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a003070mg PE=4 SV=1[more]
M5XTD4_PRUPE1.2e-7484.88Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017858mg PE=4 S... [more]
A0A0D2QGS4_GOSRA2.0e-7484.00Uncharacterized protein OS=Gossypium raimondii GN=B456_003G070300 PE=4 SV=1[more]
U5FQ57_POPTR9.8e-7482.76ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0015s05680g PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G52860.17.4e-7379.53 ABC-2 type transporter family protein[more]
AT4G25750.15.9e-7078.70 ABC-2 type transporter family protein[more]
AT5G19410.11.7e-4851.98 ABC-2 type transporter family protein[more]
AT2G13610.16.5e-4553.57 ABC-2 type transporter family protein[more]
AT1G53270.11.6e-4355.63 ABC-2 type transporter family protein[more]
Match NameE-valueIdentityDescription
gi|449445969|ref|XP_004140744.1|1.5e-7586.36PREDICTED: ABC transporter G family member 8 [Cucumis sativus][more]
gi|659077622|ref|XP_008439298.1|1.5e-7586.36PREDICTED: ABC transporter G family member 8 [Cucumis melo][more]
gi|747059406|ref|XP_011076083.1|9.7e-7584.88PREDICTED: ABC transporter G family member 8-like [Sesamum indicum][more]
gi|645258288|ref|XP_008234817.1|1.7e-7484.88PREDICTED: ABC transporter G family member 4 [Prunus mume][more]
gi|848905573|ref|XP_012852233.1|1.7e-7484.88PREDICTED: ABC transporter G family member 8 [Erythranthe guttata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G013120.1CmoCh18G013120.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 6..168
score: 2.9
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 1..176
score: 4.0E
NoneNo IPR availablePANTHERPTHR19241:SF290ABC TRANSPORTER G FAMILY MEMBER 4-RELATEDcoord: 1..176
score: 4.0E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh18G013120CmoCh16G000940Cucurbita moschata (Rifu)cmocmoB275
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G013120Cucurbita maxima (Rimu)cmacmoB255
CmoCh18G013120Cucurbita maxima (Rimu)cmacmoB292
CmoCh18G013120Cucurbita maxima (Rimu)cmacmoB591
CmoCh18G013120Wild cucumber (PI 183967)cmocpiB414
CmoCh18G013120Cucumber (Chinese Long) v2cmocuB409
CmoCh18G013120Melon (DHL92) v3.5.1cmomeB341
CmoCh18G013120Melon (DHL92) v3.5.1cmomeB368
CmoCh18G013120Watermelon (Charleston Gray)cmowcgB344
CmoCh18G013120Watermelon (Charleston Gray)cmowcgB363
CmoCh18G013120Watermelon (97103) v1cmowmB370
CmoCh18G013120Watermelon (97103) v1cmowmB380
CmoCh18G013120Cucurbita pepo (Zucchini)cmocpeB384
CmoCh18G013120Cucurbita pepo (Zucchini)cmocpeB414
CmoCh18G013120Bottle gourd (USVL1VR-Ls)cmolsiB351
CmoCh18G013120Bottle gourd (USVL1VR-Ls)cmolsiB371
CmoCh18G013120Cucumber (Gy14) v2cgybcmoB606
CmoCh18G013120Cucumber (Gy14) v2cgybcmoB607
CmoCh18G013120Melon (DHL92) v3.6.1cmomedB390
CmoCh18G013120Melon (DHL92) v3.6.1cmomedB424
CmoCh18G013120Melon (DHL92) v3.6.1cmomedB421
CmoCh18G013120Silver-seed gourdcarcmoB0968
CmoCh18G013120Silver-seed gourdcarcmoB1003
CmoCh18G013120Cucumber (Chinese Long) v3cmocucB0479
CmoCh18G013120Cucumber (Chinese Long) v3cmocucB0490
CmoCh18G013120Cucumber (Chinese Long) v3cmocucB0491
CmoCh18G013120Watermelon (97103) v2cmowmbB385
CmoCh18G013120Watermelon (97103) v2cmowmbB410
CmoCh18G013120Wax gourdcmowgoB0504
CmoCh18G013120Cucurbita moschata (Rifu)cmocmoB201
CmoCh18G013120Cucurbita moschata (Rifu)cmocmoB243
CmoCh18G013120Cucurbita moschata (Rifu)cmocmoB333