CmoCh18G013120 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAGGCAGGCATAGAGAAAAGATTCGGTCTATTCGCGTTCACACTAACCTTCCTGCTCTCATCCACCACCGAAGCACTCCCGATCTTCCTGAACGAACGCCCCATCCTCCTCCGCGAAACCTCCGGCGGCGTCTACCGTCTCTCCTCCTACATAATCGCCAACACCCTCGTGTTCCTCCCCGACCTCCTCGCCATCGCCGTGATCTACTCCGTCTCGGTCTACTTCCTGGTGGGGCTGTGCGCCACGTGGCAAGCCTTCGCATACTTCGTCCTCGTCGTCTGGGTCATCATTCTGATGGGCAACTCATTCGTGATCTTCCTCAGCTCCCTGGCTCCGAACTTCATCGCCGGCTCGTCGCTGGTGACGGTTCTGCTGGCCGGGTTTTTCCTCTTCAGCGGGTACTTCATTTCTGAGGAGAGCATGCCCAGGATGTGGGTGTTCATGCACTTGTTGTCCATGTACAAGTACGCGCTGGACGCGCTGCTCATAAACGAGTACACGTGTCTGGTTTTCTCGGTGCTTTGTTTGGTTGGAGGAGCGGGAGAAGGAGTGTTTGGTTACGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATGTGTTGGAGAAGAGAGAGGGCTGGACGAGACGCAGCGGTGGAGGAATGTTTACATGCTTTGGTGGGGTTTTTTGTGTTCTATCGTCTTCTTTGTTTGGTTGTTTTGATTAGAAGGGTTTCCAGGTCTAACAAATGATTTCAATGTTTAGCAAAAGTCTCTATTTCGAGGCCCAAAGGCCCAAATATAAGCCCATTCCATTATTCTATATTTTGGTAGTCACTAAAAATAATTAGATGTAATGGAGGCATTTCTCAATCAATTTCTGAATACAAACATAGAGTTGCAAACGCAAGAAAATAAGCAAACACTTGGTTGTTGGTTTTACAGAAATCATCGTAGACAAAACCAAAACTGCAAACTGATAAGAAATCATTAAGCATCATCAACAAACCAATGGGAAATATTATGCTCTCTCTTCTCATCAGATCTCCCATTTCTTCAACTCCATACCATCTGGAGGGCTACCTTCCACCTTCTTCGTCCCGACCTCCTTCCAGTTCGTGGACAGGACCGTGCCATTCGACTCCACCTTAAACCCAAAGCAAATCAGCCAATTCAATCAATAA ATGGATAAGGCAGGCATAGAGAAAAGATTCGGTCTATTCGCGTTCACACTAACCTTCCTGCTCTCATCCACCACCGAAGCACTCCCGATCTTCCTGAACGAACGCCCCATCCTCCTCCGCGAAACCTCCGGCGGCGTCTACCGTCTCTCCTCCTACATAATCGCCAACACCCTCGTGTTCCTCCCCGACCTCCTCGCCATCGCCGTGATCTACTCCGTCTCGGTCTACTTCCTGGTGGGGCTGTGCGCCACGTGGCAAGCCTTCGCATACTTCGTCCTCGTCGTCTGGGTCATCATTCTGATGGGCAACTCATTCGTGATCTTCCTCAGCTCCCTGGCTCCGAACTTCATCGCCGGCTCGTCGCTGGTGACGGTTCTGCTGGCCGGGTTTTTCCTCTTCAGCGGGTACTTCATTTCTGAGGAGAGCATGCCCAGGATGTGGGTGTTCATGCACTTGTTGTCCATGTACAAGTACGCGCTGGACGCGCTGCTCATAAACGAGTACACGTGTCTGATCTCCCATTTCTTCAACTCCATACCATCTGGAGGGCTACCTTCCACCTTCTTCGTCCCGACCTCCTTCCAGTTCGTGGACAGGACCGTGCCATTCGACTCCACCTTAAACCCAAAGCAAATCAGCCAATTCAATCAATAA ATGGATAAGGCAGGCATAGAGAAAAGATTCGGTCTATTCGCGTTCACACTAACCTTCCTGCTCTCATCCACCACCGAAGCACTCCCGATCTTCCTGAACGAACGCCCCATCCTCCTCCGCGAAACCTCCGGCGGCGTCTACCGTCTCTCCTCCTACATAATCGCCAACACCCTCGTGTTCCTCCCCGACCTCCTCGCCATCGCCGTGATCTACTCCGTCTCGGTCTACTTCCTGGTGGGGCTGTGCGCCACGTGGCAAGCCTTCGCATACTTCGTCCTCGTCGTCTGGGTCATCATTCTGATGGGCAACTCATTCGTGATCTTCCTCAGCTCCCTGGCTCCGAACTTCATCGCCGGCTCGTCGCTGGTGACGGTTCTGCTGGCCGGGTTTTTCCTCTTCAGCGGGTACTTCATTTCTGAGGAGAGCATGCCCAGGATGTGGGTGTTCATGCACTTGTTGTCCATGTACAAGTACGCGCTGGACGCGCTGCTCATAAACGAGTACACGTGTCTGATCTCCCATTTCTTCAACTCCATACCATCTGGAGGGCTACCTTCCACCTTCTTCGTCCCGACCTCCTTCCAGTTCGTGGACAGGACCGTGCCATTCGACTCCACCTTAAACCCAAAGCAAATCAGCCAATTCAATCAATAA
BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-71 Identity = 136/171 (79.53%), Postives = 157/171 (91.81%), Query Frame = 1
BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=3 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.0e-68 Identity = 133/169 (78.70%), Postives = 155/169 (91.72%), Query Frame = 1
BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.9e-47 Identity = 92/177 (51.98%), Postives = 143/177 (80.79%), Query Frame = 1
BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43 Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = 1
BLAST of CmoCh18G013120 vs. Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.9e-42 Identity = 89/160 (55.62%), Postives = 121/160 (75.62%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TrEMBL
Match: A0A0A0L9Y5_CUCSA (White-brown-complex ABC transporter family OS=Cucumis sativus GN=Csa_3G184580 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.0e-75 Identity = 152/176 (86.36%), Postives = 166/176 (94.32%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TrEMBL
Match: A0A022QD20_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a003070mg PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74 Identity = 146/172 (84.88%), Postives = 165/172 (95.93%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TrEMBL
Match: M5XTD4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017858mg PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74 Identity = 146/172 (84.88%), Postives = 163/172 (94.77%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TrEMBL
Match: A0A0D2QGS4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G070300 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 2.0e-74 Identity = 147/175 (84.00%), Postives = 163/175 (93.14%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TrEMBL
Match: U5FQ57_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0015s05680g PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 9.8e-74 Identity = 144/174 (82.76%), Postives = 163/174 (93.68%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TAIR10
Match: AT5G52860.1 (AT5G52860.1 ABC-2 type transporter family protein) HSP 1 Score: 270.8 bits (691), Expect = 7.4e-73 Identity = 136/171 (79.53%), Postives = 157/171 (91.81%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TAIR10
Match: AT4G25750.1 (AT4G25750.1 ABC-2 type transporter family protein) HSP 1 Score: 261.2 bits (666), Expect = 5.9e-70 Identity = 133/169 (78.70%), Postives = 155/169 (91.72%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TAIR10
Match: AT5G19410.1 (AT5G19410.1 ABC-2 type transporter family protein) HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48 Identity = 92/177 (51.98%), Postives = 143/177 (80.79%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TAIR10
Match: AT2G13610.1 (AT2G13610.1 ABC-2 type transporter family protein) HSP 1 Score: 177.9 bits (450), Expect = 6.5e-45 Identity = 90/168 (53.57%), Postives = 125/168 (74.40%), Query Frame = 1
BLAST of CmoCh18G013120 vs. TAIR10
Match: AT1G53270.1 (AT1G53270.1 ABC-2 type transporter family protein) HSP 1 Score: 173.3 bits (438), Expect = 1.6e-43 Identity = 89/160 (55.62%), Postives = 121/160 (75.62%), Query Frame = 1
BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|449445969|ref|XP_004140744.1| (PREDICTED: ABC transporter G family member 8 [Cucumis sativus]) HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75 Identity = 152/176 (86.36%), Postives = 166/176 (94.32%), Query Frame = 1
BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|659077622|ref|XP_008439298.1| (PREDICTED: ABC transporter G family member 8 [Cucumis melo]) HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75 Identity = 152/176 (86.36%), Postives = 166/176 (94.32%), Query Frame = 1
BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|747059406|ref|XP_011076083.1| (PREDICTED: ABC transporter G family member 8-like [Sesamum indicum]) HSP 1 Score: 288.5 bits (737), Expect = 9.7e-75 Identity = 146/172 (84.88%), Postives = 165/172 (95.93%), Query Frame = 1
BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|645258288|ref|XP_008234817.1| (PREDICTED: ABC transporter G family member 4 [Prunus mume]) HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74 Identity = 146/172 (84.88%), Postives = 163/172 (94.77%), Query Frame = 1
BLAST of CmoCh18G013120 vs. NCBI nr
Match: gi|848905573|ref|XP_012852233.1| (PREDICTED: ABC transporter G family member 8 [Erythranthe guttata]) HSP 1 Score: 287.7 bits (735), Expect = 1.7e-74 Identity = 146/172 (84.88%), Postives = 165/172 (95.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |