CmoCh18G012970 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G012970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Conserved peptide upstream open reading frame 14
Location	Cmo_Chr18 : 12468202 .. 12469194 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAAATGGGTAAGTGGAAAGGTTGTGGAAAACTAGGACGACTGGTGCCAAGAGGTGGTTCTATGACTTCTTACAAATATGCTCTTTTGTTGTCACCTGTTGTCTCTGTCTGGGATTGCATTGTCAGGAAAATGAGGTATTCCTACAGACCTGAGTGGGTGTAGTTTTTAGGATAGTAAAATTATAGTAGATTTATATATATATATATATAAAAAAAAGTAATCCACTGTAGATTTTATAGCATCATGATGAAAGGATGGAAAAACAATTACGAGGATATATATACTACTTACAACTAGTTCTTTGAAAAAGAGATTGAAAAGTTTAGTTAGGTTATGGCTAGTTTTGTGGCTAGTATGGGTAATAAAGGACAGCCTGTCGTGAAGAAAGCAAAAAAGAAGCAGGTGAAGGATGAGTTGGATCGTCAGAAACAAGCTGAGAAGAAAAAGAGGCGGTTAGAAAAAGCGCTTGCTACTTCAGCAGCTATTATATCTGAACTTGAAAAGAAAAAACAAATGAAGAAGGAAGAACAGCAAAGGCTAGATGAAGAAGGTGCTGCTATTGCTGAGGCTGTTGCTCTGCATGTCCTGATTGGTGAAGACTCAGATGACTCGTACAAGATTCTTCTAGAAAACGACGGTCTCAACCCTTGGGAGTGCCCTGGGCAGTTTGACCACGTAATGAGTGTTACAAGACCAGACATTCCAGTGCAGGAGTTTGGGAGATGTACCACCCTTGATGGGACTGGTTGGACTTCTAACATCGATAGATTTGGATCAATGTGGCATGGTTTTGGGAGCGATTATTGGTCGGTCTCTGCTGGACATTATGCTGAAGATCACCGTGCATTATGTTTCAAGCAAGTTGATGGAGCTGTAAGTGAGATTTCTGCTGGCATTATAGCGGCGCAGGCTGTCTCATCACTTCATATTACGGTAGATGGGGATGAAGAATTCAACGCCCTTAACAGAAAGCGAAGGGGTATGTAA

mRNA sequence

ATGAACAAAATGGGTAAGTGGAAAGGTTGTGGAAAACTAGGACGACTGGTGCCAAGAGGTGGTTCTATGACTTCTTACAAATATGCTCTTTTGTTGTCACCTGTTGTCTCTGTCTGGGATTGCATTGTCAGGAAAATGAGTATGGGTAATAAAGGACAGCCTGTCGTGAAGAAAGCAAAAAAGAAGCAGGTGAAGGATGAGTTGGATCGTCAGAAACAAGCTGAGAAGAAAAAGAGGCGGTTAGAAAAAGCGCTTGCTACTTCAGCAGCTATTATATCTGAACTTGAAAAGAAAAAACAAATGAAGAAGGAAGAACAGCAAAGGCTAGATGAAGAAGGTGCTGCTATTGCTGAGGCTGTTGCTCTGCATGTCCTGATTGGTGAAGACTCAGATGACTCGTACAAGATTCTTCTAGAAAACGACGGTCTCAACCCTTGGGAGTGCCCTGGGCAGTTTGACCACGTAATGAGTGTTACAAGACCAGACATTCCAGTGCAGGAGTTTGGGAGATGTACCACCCTTGATGGGACTGGTTGGACTTCTAACATCGATAGATTTGGATCAATGTGGCATGGTTTTGGGAGCGATTATTGGTCGGTCTCTGCTGGACATTATGCTGAAGATCACCGTGCATTATGTTTCAAGCAAGTTGATGGAGCTGTAAGTGAGATTTCTGCTGGCATTATAGCGGCGCAGGCTGTCTCATCACTTCATATTACGGTAGATGGGGATGAAGAATTCAACGCCCTTAACAGAAAGCGAAGGGGTATGTAA

Coding sequence (CDS)

ATGAACAAAATGGGTAAGTGGAAAGGTTGTGGAAAACTAGGACGACTGGTGCCAAGAGGTGGTTCTATGACTTCTTACAAATATGCTCTTTTGTTGTCACCTGTTGTCTCTGTCTGGGATTGCATTGTCAGGAAAATGAGTATGGGTAATAAAGGACAGCCTGTCGTGAAGAAAGCAAAAAAGAAGCAGGTGAAGGATGAGTTGGATCGTCAGAAACAAGCTGAGAAGAAAAAGAGGCGGTTAGAAAAAGCGCTTGCTACTTCAGCAGCTATTATATCTGAACTTGAAAAGAAAAAACAAATGAAGAAGGAAGAACAGCAAAGGCTAGATGAAGAAGGTGCTGCTATTGCTGAGGCTGTTGCTCTGCATGTCCTGATTGGTGAAGACTCAGATGACTCGTACAAGATTCTTCTAGAAAACGACGGTCTCAACCCTTGGGAGTGCCCTGGGCAGTTTGACCACGTAATGAGTGTTACAAGACCAGACATTCCAGTGCAGGAGTTTGGGAGATGTACCACCCTTGATGGGACTGGTTGGACTTCTAACATCGATAGATTTGGATCAATGTGGCATGGTTTTGGGAGCGATTATTGGTCGGTCTCTGCTGGACATTATGCTGAAGATCACCGTGCATTATGTTTCAAGCAAGTTGATGGAGCTGTAAGTGAGATTTCTGCTGGCATTATAGCGGCGCAGGCTGTCTCATCACTTCATATTACGGTAGATGGGGATGAAGAATTCAACGCCCTTAACAGAAAGCGAAGGGGTATGTAA

Homology

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BLAST of CmoCh18G012970 vs. TrEMBL
Match: A0A0A0L6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183910 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.5e-97
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 47  SMGNKGQPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQ 106
           SMGNKGQP+VKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQ
Sbjct: 7   SMGNKGQPMVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQ 66

Query: 107 QRLDEEGAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQ 166
           QRLDEEGAAIAEAVALHVLIGEDSDDSYKILL+ND LNPWECPGQFDHVM+VTRP +PVQ
Sbjct: 67  QRLDEEGAAIAEAVALHVLIGEDSDDSYKILLKNDDLNPWECPGQFDHVMNVTRPGLPVQ 126

Query: 167 EFGRCTTLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISA 226
           EFGRC +++GTGWTSNIDRF SMWHGF +DYWSVSAG Y E+H  LCF+QVDGAVSEISA
Sbjct: 127 EFGRC-SIEGTGWTSNIDRFESMWHGFRNDYWSVSAGPYTEEHHTLCFEQVDGAVSEISA 186

Query: 227 GIIAAQAVSSLHITVDGDEEFNALNRKRRGM 258
           GIIAAQAVSSL ITVDGDEE N LNR RRG+
Sbjct: 187 GIIAAQAVSSLQITVDGDEEMNVLNRMRRGI 216

[Close]

BLAST of CmoCh18G012970 vs. TrEMBL
Match: A0A061G279_THECC (Transport protein SEC31 OS=Theobroma cacao GN=TCM_015242 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.0e-63
Identity = 151/254 (59.45%), Postives = 171/254 (67.32%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMGNKGQPVVKKAKKKQ 63
           MGK KGCGKLGR++PR G + +Y  ALL SPVVSVWDCI       NK QPVV+KAKKKQ
Sbjct: 1   MGKCKGCGKLGRMLPRDGPVNTYHSALLCSPVVSVWDCIAC-----NKVQPVVRKAKKKQ 60

Query: 64  VKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEEGAAIAEAVALH 123
           VKDELDR KQAEKKKRRLEKALATSAAI SELEKKKQ KKEEQQRLDEEGAAIAEAVALH
Sbjct: 61  VKDELDRIKQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQQRLDEEGAAIAEAVALH 120

Query: 124 VLIGEDSDDSYKILL-ENDGLNPWECPGQFDHVMSVTRPDIPVQEFGRCTTLDGTGWTSN 183
           VL+GEDSDDS KI+L + +G N W+    FD  M   R  +P Q    C      GW SN
Sbjct: 121 VLLGEDSDDSCKIMLNKEEGFNRWDYASNFDLFMGRGRACLPHQAHTNC-----EGWVSN 180

Query: 184 IDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIAAQAVSSLHITVD 243
               G  W   G++ WS S G Y  D  A   +      + +SAG+IAAQAVS+L IT D
Sbjct: 181 AYTAGCEWPELGNNDWSFSYGAYGRDLHAPYLEDEGWGSAGLSAGLIAAQAVSALQITED 240

Query: 244 GDEEFNALNRKRRG 257
            + +   LN   RG
Sbjct: 241 AEVDTIVLNGMLRG 244

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BLAST of CmoCh18G012970 vs. TrEMBL
Match: F6H6D1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g01060 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 151/272 (55.51%), Postives = 177/272 (65.07%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMG-------------- 63
           MGK KGCGKLGR+V + G +++Y  ALLL P+VSVWDC VRKM                 
Sbjct: 1   MGKCKGCGKLGRMVSKDGFVSAYHSALLLCPIVSVWDCAVRKMRYSFRPEWLEKLVVVMD 60

Query: 64  ----NKGQPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEE 123
                K    V+K KKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQ KKEE
Sbjct: 61  NTACTKVPSAVRKVKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQKKKEE 120

Query: 124 QQRLDEEGAAIAEAVALHVLIGEDSDDSYKILLEND-GLNPWECPGQFDHVMSVTRPDIP 183
           QQRLDEEGAAIAEAVALHVL+GEDSDDS K+ L+ D G NPW+C    D +M   R  IP
Sbjct: 121 QQRLDEEGAAIAEAVALHVLLGEDSDDSRKMALKKDEGFNPWDCATSIDLLMG-GRSGIP 180

Query: 184 VQEFGRCTTLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEI 243
            Q   +C +L+   W SN+   G  W+  G+  WSVS+G +  D     F++     +EI
Sbjct: 181 CQGPTKC-SLNEIEWVSNVYESGCEWNYLGNGDWSVSSGPFRRDLHPPYFEEGSWETTEI 240

Query: 244 SAGIIAAQAVSSLHITVDGDEEFNALNRKRRG 257
           SAG++AAQAVSSL I  D   +    N   RG
Sbjct: 241 SAGLLAAQAVSSLQIAEDAPVDTIVFNGMLRG 270

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BLAST of CmoCh18G012970 vs. TrEMBL
Match: B9RIT8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1582560 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60
Identity = 146/248 (58.87%), Postives = 172/248 (69.35%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMG--------NKGQPV 63
           MGK KGCGKLGR+VPRG S+ +Y ++LLLSPVVSVWDC+VRKM +         NK QPV
Sbjct: 1   MGKCKGCGKLGRMVPRGESVNAYHFSLLLSPVVSVWDCVVRKMRLVVSMDTIACNKVQPV 60

Query: 64  VKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEEGAA 123
           ++K KKKQVK ELDR KQAEKKKRRLEKALATSAAIISELEKKKQ KKEEQQRLDEEGAA
Sbjct: 61  MRKVKKKQVKGELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAA 120

Query: 124 IAEAVALHVLIGEDSDDSYKILL-ENDGLNPWECPGQFDHVMSVTRPDIPVQEFGRCTTL 183
           IAEAVAL VL+GEDSDD  K++L + +G NPW+C    +  M   R  +P Q+ G   + 
Sbjct: 121 IAEAVALQVLLGEDSDDPCKLVLNKEEGFNPWDCGSNINLFMGEERACLPHQD-GSRHSH 180

Query: 184 DGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIAAQAV 243
           +  GW SN    G  W    +  WS S G +  D     F+  DG+    +AG+IAAQAV
Sbjct: 181 ERIGWISNACGAGCEWSDADNSSWSFSYGSFGRDAHTPYFE--DGSWG--TAGLIAAQAV 240

[Close]

BLAST of CmoCh18G012970 vs. TrEMBL
Match: A0A0R0FSE5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G179300 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.7e-56
Identity = 137/256 (53.52%), Postives = 171/256 (66.80%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMG-------------N 63
           MGK KGCGKLGR+ P    M++Y+++L+L+PVVSVWDCIVRKMS+              N
Sbjct: 1   MGKCKGCGKLGRMRP--SHMSAYEFSLMLAPVVSVWDCIVRKMSIYYLGVVNSMDTMACN 60

Query: 64  KGQPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLD 123
           KGQ  V+KAKKKQVKDELDR KQAEKKKRRLEKALATSAAIISELEKKKQ KKEEQQRLD
Sbjct: 61  KGQ-TVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLD 120

Query: 124 EEGAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQEFGR 183
           EEGAAIAEAVALHVL+GEDSD+S K+++++ G   W C       +       P  + GR
Sbjct: 121 EEGAAIAEAVALHVLLGEDSDESCKVVIDDGGCKTWNCNRTLGISLGGESACFPHLDGGR 180

Query: 184 CTTLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIA 243
             + +  GW S+  R+G  W    +  WS S+  + ++     ++      +  SA +IA
Sbjct: 181 -WSFERVGWVSDAYRYGCKWGAAENGEWSFSSEPFEKNVHGPLYEGAGWGPANFSADLIA 240

Query: 244 AQAVSSLHITVDGDEE 247
           AQAVSSL I  + DE+
Sbjct: 241 AQAVSSLQIAEEADED 252

[Close]

BLAST of CmoCh18G012970 vs. TAIR10
Match: AT4G25670.1 (AT4G25670.1 unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 6.3e-31
Identity = 98/204 (48.04%), Postives = 117/204 (57.35%), Query Frame = 1


Query: 53  QPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEE 112
           QPVV+KAKKK  KDE DR KQAEKKKRRLEKALATSAAI +ELEKKKQ + EEQQRLDEE
Sbjct: 10  QPVVRKAKKKHGKDEFDRIKQAEKKKRRLEKALATSAAIRAELEKKKQKRLEEQQRLDEE 69

Query: 113 GAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQEFGRCT 172
           GAAIAEAVALHVL+GEDSDDS ++    +        G    +    R +   ++     
Sbjct: 70  GAAIAEAVALHVLLGEDSDDSSRVKFGEE-------KGFTMDLFRDERTNYVPRQSCASY 129

Query: 173 TLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIAAQ 232
            + G G+ SN        +G G   WS      A D+              ISA +IAAQ
Sbjct: 130 AVQGIGFVSN-------GYGLGDSNWSPFTRRGAWDNN-----------MGISADLIAAQ 188

Query: 233 AVSSLHITVDGDEEFNALNRKRRG 257
           AVS+L I+ + D      N   RG
Sbjct: 190 AVSALQISENADGNAFVFNGMFRG 188

[Close]

BLAST of CmoCh18G012970 vs. TAIR10
Match: AT4G25690.1 (AT4G25690.1 unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 96/192 (50.00%), Postives = 114/192 (59.38%), Query Frame = 1


Query: 53  QPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEE 112
           QPV +K KK   KDE DR KQAEKKKRRLEKALATSAAI +ELEKKKQ + EEQQRLDEE
Sbjct: 11  QPVTRKVKKHG-KDEFDRIKQAEKKKRRLEKALATSAAIRAELEKKKQKRLEEQQRLDEE 70

Query: 113 GAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQEFGRCT 172
           GAAIAEAVALHVL+GEDSDDS ++    +        G    +    R +   ++     
Sbjct: 71  GAAIAEAVALHVLLGEDSDDSSRVKFGEE-------TGFGMDLFRDERTNYVPRQSCASY 130

Query: 173 TLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIAAQ 232
            + G G+ SN        +G G   WSVS   + +D        V      ISA +IAAQ
Sbjct: 131 AVQGIGFVSN-------GYGLGDSNWSVSYKPFMKD--------VWDNNMVISADLIAAQ 179

Query: 233 AVSSLHITVDGD 245
           AVSSL I+ D D
Sbjct: 191 AVSSLQISEDAD 179

[Close]

BLAST of CmoCh18G012970 vs. TAIR10
Match: AT5G52550.1 (AT5G52550.1 unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = 1


Query: 59  AKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEEGAAIAE 118
           AKKKQ ++EL+R KQAE+KKRR+EK++ATSAAI +ELEKKK  K EEQ+RLDEEGAAIAE
Sbjct: 181 AKKKQEREELERIKQAERKKRRIEKSIATSAAIRAELEKKKLRKLEEQRRLDEEGAAIAE 240

Query: 119 AVALHVLIGEDSDDSYKILLEND-GLNPWE 148
           AVALHVL+GED DDSY+  L  + G  PW+
Sbjct: 241 AVALHVLLGEDCDDSYRNTLNQETGFKPWD 270

[Close]

BLAST of CmoCh18G012970 vs. TAIR10
Match: AT5G52552.1 (AT5G52552.1 conserved peptide upstream open reading frame 14)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-10
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 1


Query: 4  MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKM 47
          MG+ KGC KLGR++ +  S  SY  +LLLSPVVSVWDCIVRKM
Sbjct: 1  MGEVKGCWKLGRMLSKDNSANSYNVSLLLSPVVSVWDCIVRKM 43

[Close]

BLAST of CmoCh18G012970 vs. TAIR10
Match: AT4G25672.1 (AT4G25672.1 conserved peptide upstream open reading frame 12)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-08
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 1


Query: 4  MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKM 47
          MG+ KGCG +GR++ +  S  SY  +L LSPVVS WDCIVR M
Sbjct: 1  MGESKGCGNVGRMISKNKSANSYNLSLQLSPVVSFWDCIVRTM 43

[Close]

BLAST of CmoCh18G012970 vs. NCBI nr
Match: gi|449446003|ref|XP_004140761.1| (PREDICTED: uncharacterized protein LOC101212865 isoform X1 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 2.2e-97
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 47  SMGNKGQPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQ 106
           SMGNKGQP+VKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQ
Sbjct: 7   SMGNKGQPMVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQ 66

Query: 107 QRLDEEGAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQ 166
           QRLDEEGAAIAEAVALHVLIGEDSDDSYKILL+ND LNPWECPGQFDHVM+VTRP +PVQ
Sbjct: 67  QRLDEEGAAIAEAVALHVLIGEDSDDSYKILLKNDDLNPWECPGQFDHVMNVTRPGLPVQ 126

Query: 167 EFGRCTTLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISA 226
           EFGRC +++GTGWTSNIDRF SMWHGF +DYWSVSAG Y E+H  LCF+QVDGAVSEISA
Sbjct: 127 EFGRC-SIEGTGWTSNIDRFESMWHGFRNDYWSVSAGPYTEEHHTLCFEQVDGAVSEISA 186

Query: 227 GIIAAQAVSSLHITVDGDEEFNALNRKRRGM 258
           GIIAAQAVSSL ITVDGDEE N LNR RRG+
Sbjct: 187 GIIAAQAVSSLQITVDGDEEMNVLNRMRRGI 216

[Close]

BLAST of CmoCh18G012970 vs. NCBI nr
Match: gi|590673123|ref|XP_007038801.1| (Transport protein SEC31 [Theobroma cacao])

HSP 1 Score: 248.8 bits (634), Expect = 1.0e-62
Identity = 151/254 (59.45%), Postives = 171/254 (67.32%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMGNKGQPVVKKAKKKQ 63
           MGK KGCGKLGR++PR G + +Y  ALL SPVVSVWDCI       NK QPVV+KAKKKQ
Sbjct: 1   MGKCKGCGKLGRMLPRDGPVNTYHSALLCSPVVSVWDCIAC-----NKVQPVVRKAKKKQ 60

Query: 64  VKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEEGAAIAEAVALH 123
           VKDELDR KQAEKKKRRLEKALATSAAI SELEKKKQ KKEEQQRLDEEGAAIAEAVALH
Sbjct: 61  VKDELDRIKQAEKKKRRLEKALATSAAIRSELEKKKQKKKEEQQRLDEEGAAIAEAVALH 120

Query: 124 VLIGEDSDDSYKILL-ENDGLNPWECPGQFDHVMSVTRPDIPVQEFGRCTTLDGTGWTSN 183
           VL+GEDSDDS KI+L + +G N W+    FD  M   R  +P Q    C      GW SN
Sbjct: 121 VLLGEDSDDSCKIMLNKEEGFNRWDYASNFDLFMGRGRACLPHQAHTNC-----EGWVSN 180

Query: 184 IDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIAAQAVSSLHITVD 243
               G  W   G++ WS S G Y  D  A   +      + +SAG+IAAQAVS+L IT D
Sbjct: 181 AYTAGCEWPELGNNDWSFSYGAYGRDLHAPYLEDEGWGSAGLSAGLIAAQAVSALQITED 240

Query: 244 GDEEFNALNRKRRG 257
            + +   LN   RG
Sbjct: 241 AEVDTIVLNGMLRG 244

[Close]

BLAST of CmoCh18G012970 vs. NCBI nr
Match: gi|223547565|gb|EEF49060.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 240.7 bits (613), Expect = 2.8e-60
Identity = 146/248 (58.87%), Postives = 172/248 (69.35%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMG--------NKGQPV 63
           MGK KGCGKLGR+VPRG S+ +Y ++LLLSPVVSVWDC+VRKM +         NK QPV
Sbjct: 1   MGKCKGCGKLGRMVPRGESVNAYHFSLLLSPVVSVWDCVVRKMRLVVSMDTIACNKVQPV 60

Query: 64  VKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLDEEGAA 123
           ++K KKKQVK ELDR KQAEKKKRRLEKALATSAAIISELEKKKQ KKEEQQRLDEEGAA
Sbjct: 61  MRKVKKKQVKGELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAA 120

Query: 124 IAEAVALHVLIGEDSDDSYKILL-ENDGLNPWECPGQFDHVMSVTRPDIPVQEFGRCTTL 183
           IAEAVAL VL+GEDSDD  K++L + +G NPW+C    +  M   R  +P Q+ G   + 
Sbjct: 121 IAEAVALQVLLGEDSDDPCKLVLNKEEGFNPWDCGSNINLFMGEERACLPHQD-GSRHSH 180

Query: 184 DGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIAAQAV 243
           +  GW SN    G  W    +  WS S G +  D     F+  DG+    +AG+IAAQAV
Sbjct: 181 ERIGWISNACGAGCEWSDADNSSWSFSYGSFGRDAHTPYFE--DGSWG--TAGLIAAQAV 240

[Close]

BLAST of CmoCh18G012970 vs. NCBI nr
Match: gi|947059458|gb|KRH08864.1| (hypothetical protein GLYMA_16G179300 [Glycine max])

HSP 1 Score: 226.5 bits (576), Expect = 5.4e-56
Identity = 137/256 (53.52%), Postives = 171/256 (66.80%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMG-------------N 63
           MGK KGCGKLGR+ P    M++Y+++L+L+PVVSVWDCIVRKMS+              N
Sbjct: 1   MGKCKGCGKLGRMRP--SHMSAYEFSLMLAPVVSVWDCIVRKMSIYYLGVVNSMDTMACN 60

Query: 64  KGQPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLD 123
           KGQ  V+KAKKKQVKDELDR KQAEKKKRRLEKALATSAAIISELEKKKQ KKEEQQRLD
Sbjct: 61  KGQ-TVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLD 120

Query: 124 EEGAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQEFGR 183
           EEGAAIAEAVALHVL+GEDSD+S K+++++ G   W C       +       P  + GR
Sbjct: 121 EEGAAIAEAVALHVLLGEDSDESCKVVIDDGGCKTWNCNRTLGISLGGESACFPHLDGGR 180

Query: 184 CTTLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIA 243
             + +  GW S+  R+G  W    +  WS S+  + ++     ++      +  SA +IA
Sbjct: 181 -WSFERVGWVSDAYRYGCKWGAAENGEWSFSSEPFEKNVHGPLYEGAGWGPANFSADLIA 240

Query: 244 AQAVSSLHITVDGDEE 247
           AQAVSSL I  + DE+
Sbjct: 241 AQAVSSLQIAEEADED 252

[Close]

BLAST of CmoCh18G012970 vs. NCBI nr
Match: gi|965617115|dbj|BAU02265.1| (hypothetical protein VIGAN_11175900 [Vigna angularis var. angularis])

HSP 1 Score: 226.1 bits (575), Expect = 7.0e-56
Identity = 138/256 (53.91%), Postives = 171/256 (66.80%), Query Frame = 1


Query: 4   MGKWKGCGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMSMG-------------N 63
           MGK KGCGKLGR+ P    M++Y+++L+L+PVVSVWDCIVRKMS+              N
Sbjct: 1   MGKCKGCGKLGRMRP--SHMSAYEFSLMLAPVVSVWDCIVRKMSIYYLGAVNSMDTMACN 60

Query: 64  KGQPVVKKAKKKQVKDELDRQKQAEKKKRRLEKALATSAAIISELEKKKQMKKEEQQRLD 123
           KGQ V +KAKKKQVKDELDR KQAEKKKRRLEKALATSAAIISELEKKKQ KKEEQQRLD
Sbjct: 61  KGQHV-RKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLD 120

Query: 124 EEGAAIAEAVALHVLIGEDSDDSYKILLENDGLNPWECPGQFDHVMSVTRPDIPVQEFGR 183
           EEGAAIAEAVALHVL+ EDSDDS K++++N G   W C       +       P  + GR
Sbjct: 121 EEGAAIAEAVALHVLLDEDSDDSCKVVIDNGGCKTWNCNRNLGISVGGESGCFPHLDGGR 180

Query: 184 CTTLDGTGWTSNIDRFGSMWHGFGSDYWSVSAGHYAEDHRALCFKQVDGAVSEISAGIIA 243
             + +  GW S+  R+G  W G  +  WS S+  + ++     ++      +  SA +IA
Sbjct: 181 -WSFERVGWVSDAYRYGCKWGGGENGEWSFSSDPFEKNVNEPLYEGAGWGPAGFSADLIA 240

Query: 244 AQAVSSLHITVDGDEE 247
           AQAVS+L I  + DE+
Sbjct: 241 AQAVSALQIAEEADED 252

The following BLAST results are available for this feature:

BLAST of CmoCh18G012970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh18G012970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6N8_CUCSA	1.5e-97	88.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183910 PE=4 SV=1	[more]
A0A061G279_THECC	7.0e-63	59.45	Transport protein SEC31 OS=Theobroma cacao GN=TCM_015242 PE=4 SV=1	[more]
F6H6D1_VITVI	2.0e-62	55.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g01060 PE=4 SV=...	[more]
B9RIT8_RICCO	1.9e-60	58.87	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1582560 PE=4 SV=1	[more]
A0A0R0FSE5_SOYBN	3.7e-56	53.52	Uncharacterized protein OS=Glycine max GN=GLYMA_16G179300 PE=4 SV=1	[more]

BLAST of CmoCh18G012970 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25670.1	6.3e-31	48.04	unknown protein	[more]
AT4G25690.1	3.5e-29	50.00	unknown protein	[more]
AT5G52550.1	1.5e-24	70.00	unknown protein	[more]
AT5G52552.1	4.7e-10	67.44	conserved peptide upstream open reading frame 14	[more]
AT4G25672.1	3.4e-08	58.14	conserved peptide upstream open reading frame 12	[more]

BLAST of CmoCh18G012970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446003\|ref\|XP_004140761.1\|	2.2e-97	88.63	PREDICTED: uncharacterized protein LOC101212865 isoform X1 [Cucumis sativus]	[more]
gi\|590673123\|ref\|XP_007038801.1\|	1.0e-62	59.45	Transport protein SEC31 [Theobroma cacao]	[more]
gi\|223547565\|gb\|EEF49060.1\|	2.8e-60	58.87	conserved hypothetical protein [Ricinus communis]	[more]
gi\|947059458\|gb\|KRH08864.1\|	5.4e-56	53.52	hypothetical protein GLYMA_16G179300 [Glycine max]	[more]
gi\|965617115\|dbj\|BAU02265.1\|	7.0e-56	53.91	hypothetical protein VIGAN_11175900 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G012970.1	CmoCh18G012970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 57..115 scor
None	No IPR available	PANTHER	PTHR34212	FAMILY NOT NAMED	coord: 24..246 score: 5.4
None	No IPR available	PANTHER	PTHR34212:SF1	SUBFAMILY NOT NAMED	coord: 24..246 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G012970	Cucsa.108080	Cucumber (Gy14) v1	cgycmoB0248
CmoCh18G012970	CmaCh16G001020	Cucurbita maxima (Rimu)	cmacmoB327
CmoCh18G012970	CmaCh18G012670	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G012970	Cla006150	Watermelon (97103) v1	cmowmB366
CmoCh18G012970	Csa3G183910	Cucumber (Chinese Long) v2	cmocuB398
CmoCh18G012970	MELO3C006939	Melon (DHL92) v3.5.1	cmomeB368
CmoCh18G012970	ClCG05G008340	Watermelon (Charleston Gray)	cmowcgB359
CmoCh18G012970	CSPI03G17230	Wild cucumber (PI 183967)	cmocpiB401
CmoCh18G012970	Lsi05G011980	Bottle gourd (USVL1VR-Ls)	cmolsiB372
CmoCh18G012970	Cp4.1LG09g00690	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G012970	MELO3C006940.2	Melon (DHL92) v3.6.1	cmomedB421
CmoCh18G012970	CsaV3_3G017430	Cucumber (Chinese Long) v3	cmocucB0476
CmoCh18G012970	Cla97C05G090450	Watermelon (97103) v2	cmowmbB404
CmoCh18G012970	BhiUN557G4	Wax gourd	cmowgoB0502
CmoCh18G012970	CsGy3G017300	Cucumber (Gy14) v2	cgybcmoB324
CmoCh18G012970	Carg15112	Silver-seed gourd	carcmoB1328
CmoCh18G012970	Carg22124	Silver-seed gourd	carcmoB1003

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G012970	CmoCh16G001090	Cucurbita moschata (Rifu)	cmocmoB275

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G012970	Silver-seed gourd	carcmoB0968
CmoCh18G012970	Cucumber (Chinese Long) v3	cmocucB0479
CmoCh18G012970	Cucumber (Chinese Long) v3	cmocucB0491
CmoCh18G012970	Watermelon (97103) v2	cmowmbB410
CmoCh18G012970	Wax gourd	cmowgoB0508
CmoCh18G012970	Cucurbita moschata (Rifu)	cmocmoB201
CmoCh18G012970	Cucurbita moschata (Rifu)	cmocmoB243
CmoCh18G012970	Cucurbita moschata (Rifu)	cmocmoB333
CmoCh18G012970	Melon (DHL92) v3.5.1	cmomeB370
CmoCh18G012970	Cucurbita maxima (Rimu)	cmacmoB255
CmoCh18G012970	Cucurbita maxima (Rimu)	cmacmoB292
CmoCh18G012970	Cucurbita maxima (Rimu)	cmacmoB591
CmoCh18G012970	Watermelon (Charleston Gray)	cmowcgB363
CmoCh18G012970	Watermelon (97103) v1	cmowmB370
CmoCh18G012970	Cucurbita pepo (Zucchini)	cmocpeB384
CmoCh18G012970	Cucurbita pepo (Zucchini)	cmocpeB386
CmoCh18G012970	Cucurbita pepo (Zucchini)	cmocpeB414
CmoCh18G012970	Bottle gourd (USVL1VR-Ls)	cmolsiB371
CmoCh18G012970	Cucumber (Gy14) v2	cgybcmoB606
CmoCh18G012970	Melon (DHL92) v3.6.1	cmomedB425
CmoCh18G012970	Melon (DHL92) v3.6.1	cmomedB424