CmoCh18G011790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCATTATCCTCTTCGGTGAGAGCGAAAAATTCGAAGCTGGGTGGGACTTCAGTCCACGGATTTGCTATAGAATTAATTAAGTAATGAAGATTTCCTGTTCGACTACCTTCGCAAGTTTAGCTGAATCTTCAATCCATTGTCTTTCTAATCAATGGAAACCGTTGTCTCCTTTGAAATCCACGGAGAAACCAATTCCTAAGATTCTACTCTTTGGTTACCGCAATTTGTCCCTCCGACAGCCACCCCGGCGTTCGAATTCCCGGTTCCAAAATGGGTTTCGCCCACTTTGCTTCTTCAATGCTAAAGATGAATCCGGCGGCGATTTTCAGCAAAAGGTGCGCTCTTCTTACTCAAATTCACCATTAATTTTGGACACACTTGCTGTTGAATTTAGAGAAATGTACTAAATAGCAGAGAATTGAAGTACGTTTACTGTGTTGCTGAAAAGAAAAGAAAGCATTTGACTGTGTTGAGGATGGTTGGGAGACGAGTCACACATCGGCTAATTAAGGGGAAGGTCACGAGTTTATAAATAAGGAATTCTATCTCCATTGGTACGAAACATTTGGGAAAACTGCCATGAAGCTCAAAGTGGACAATACGTACCATTATGGAGATTCGTGGTTCCTAACATGTTTTCAGAGCTATGTCATTAACTTAGTCATGTCTATAGAACCCTCAAGTGTCAAACAAAGAAGTTGTGAGCCTCAAATGTGTAGTTAAAAGTGACCCAAAGTGTCGAATAGATGGTGTACTTTGTTTGAGGGCTCCAGAGAAGGAGTCAAGTCTCTATTAAGGGGAGGTTGTTCGAGGGCTCCATAGGCCTCTGGGGAGGCTCTACAGTGTACTTTGTTCGAGGAGAGGATTGTTGGTAGAGGAGTCCCACGTTGACTAATTAAGGGGAAGATCATGAGTTTATAAGTAAGGAATACTATCTCCATTTGTACAAGGCCTTTTGGGGAAACCAAAAGCAAAGTCACAAGATAAGCGGAAAATATGACATTTTGTTTCAAAATTCTCTGTTGATTTCTTGGAAAAAAAGAAAACGGTATCAGTTGAGTTAAAGGAATTTGAAACATTGTTTCAGGGAAATGGGGCGGGATGGCCTATCTTGAGGCGATGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCATTAGCTTGTGGATTGAGGTGACTTTTTTGCGACTATTTTTACTTTGTCCAAGTGTAATTGCTTTCATAATAAGCAAGAGGAAAAAAGTTAATGTTTTCCCAGACAGTTTCATTGTGACAGGATTGGTTGA GCATTATCCTCTTCGGTGAGAGCGAAAAATTCGAAGCTGGGTGGGACTTCAGTCCACGGATTTGCTATAGAATTAATTAAGTAATGAAGATTTCCTGTTCGACTACCTTCGCAAGTTTAGCTGAATCTTCAATCCATTGTCTTTCTAATCAATGGAAACCGTTGTCTCCTTTGAAATCCACGGAGAAACCAATTCCTAAGATTCTACTCTTTGGTTACCGCAATTTGTCCCTCCGACAGCCACCCCGGCGTTCGAATTCCCGGTTCCAAAATGGGTTTCGCCCACTTTGCTTCTTCAATGCTAAAGATGAATCCGGCGGCGATTTTCAGCAAAAGGGAAATGGGGCGGGATGGCCTATCTTGAGGCGATGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCATTAGCTTGTGGATTGAGACAGTTTCATTGTGACAGGATTGGTTGA ATGAAGATTTCCTGTTCGACTACCTTCGCAAGTTTAGCTGAATCTTCAATCCATTGTCTTTCTAATCAATGGAAACCGTTGTCTCCTTTGAAATCCACGGAGAAACCAATTCCTAAGATTCTACTCTTTGGTTACCGCAATTTGTCCCTCCGACAGCCACCCCGGCGTTCGAATTCCCGGTTCCAAAATGGGTTTCGCCCACTTTGCTTCTTCAATGCTAAAGATGAATCCGGCGGCGATTTTCAGCAAAAGGGAAATGGGGCGGGATGGCCTATCTTGAGGCGATGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCATTAGCTTGTGGATTGAGACAGTTTCATTGTGACAGGATTGGTTGA
BLAST of CmoCh18G011790 vs. TrEMBL
Match: A0A0A0KQK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605040 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 9.8e-47 Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 1
BLAST of CmoCh18G011790 vs. TrEMBL
Match: W9R209_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001018 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-17 Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 1
BLAST of CmoCh18G011790 vs. TrEMBL
Match: A0A067KYF7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15599 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.2e-17 Identity = 52/117 (44.44%), Postives = 69/117 (58.97%), Query Frame = 1
BLAST of CmoCh18G011790 vs. TrEMBL
Match: Q9M9T5_ARATH (F14L17.3 protein OS=Arabidopsis thaliana GN=F14L17.3 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13 Identity = 46/105 (43.81%), Postives = 56/105 (53.33%), Query Frame = 1
BLAST of CmoCh18G011790 vs. TrEMBL
Match: A0A151RTI5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_032603 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13 Identity = 48/106 (45.28%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of CmoCh18G011790 vs. TAIR10
Match: AT1G14270.1 (AT1G14270.1 CAAX amino terminal protease family protein) HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15 Identity = 44/101 (43.56%), Postives = 54/101 (53.47%), Query Frame = 1
BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|659091049|ref|XP_008446341.1| (PREDICTED: uncharacterized protein LOC103489109 isoform X2 [Cucumis melo]) HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48 Identity = 94/114 (82.46%), Postives = 99/114 (86.84%), Query Frame = 1
BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|659091047|ref|XP_008446340.1| (PREDICTED: uncharacterized protein LOC103489109 isoform X1 [Cucumis melo]) HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48 Identity = 94/114 (82.46%), Postives = 99/114 (86.84%), Query Frame = 1
BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|449434788|ref|XP_004135178.1| (PREDICTED: uncharacterized protein LOC101219539 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46 Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 1
BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|657994341|ref|XP_008389475.1| (PREDICTED: uncharacterized protein LOC103451824 [Malus domestica]) HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17 Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 1
BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|703099067|ref|XP_010096551.1| (hypothetical protein L484_001018 [Morus notabilis]) HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17 Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |