CmoCh18G011790 (gene) Cucurbita moschata (Rifu)

NameCmoCh18G011790
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCAAX amino terminal protease family protein
LocationCmo_Chr18 : 11858548 .. 11859839 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCATTATCCTCTTCGGTGAGAGCGAAAAATTCGAAGCTGGGTGGGACTTCAGTCCACGGATTTGCTATAGAATTAATTAAGTAATGAAGATTTCCTGTTCGACTACCTTCGCAAGTTTAGCTGAATCTTCAATCCATTGTCTTTCTAATCAATGGAAACCGTTGTCTCCTTTGAAATCCACGGAGAAACCAATTCCTAAGATTCTACTCTTTGGTTACCGCAATTTGTCCCTCCGACAGCCACCCCGGCGTTCGAATTCCCGGTTCCAAAATGGGTTTCGCCCACTTTGCTTCTTCAATGCTAAAGATGAATCCGGCGGCGATTTTCAGCAAAAGGTGCGCTCTTCTTACTCAAATTCACCATTAATTTTGGACACACTTGCTGTTGAATTTAGAGAAATGTACTAAATAGCAGAGAATTGAAGTACGTTTACTGTGTTGCTGAAAAGAAAAGAAAGCATTTGACTGTGTTGAGGATGGTTGGGAGACGAGTCACACATCGGCTAATTAAGGGGAAGGTCACGAGTTTATAAATAAGGAATTCTATCTCCATTGGTACGAAACATTTGGGAAAACTGCCATGAAGCTCAAAGTGGACAATACGTACCATTATGGAGATTCGTGGTTCCTAACATGTTTTCAGAGCTATGTCATTAACTTAGTCATGTCTATAGAACCCTCAAGTGTCAAACAAAGAAGTTGTGAGCCTCAAATGTGTAGTTAAAAGTGACCCAAAGTGTCGAATAGATGGTGTACTTTGTTTGAGGGCTCCAGAGAAGGAGTCAAGTCTCTATTAAGGGGAGGTTGTTCGAGGGCTCCATAGGCCTCTGGGGAGGCTCTACAGTGTACTTTGTTCGAGGAGAGGATTGTTGGTAGAGGAGTCCCACGTTGACTAATTAAGGGGAAGATCATGAGTTTATAAGTAAGGAATACTATCTCCATTTGTACAAGGCCTTTTGGGGAAACCAAAAGCAAAGTCACAAGATAAGCGGAAAATATGACATTTTGTTTCAAAATTCTCTGTTGATTTCTTGGAAAAAAAGAAAACGGTATCAGTTGAGTTAAAGGAATTTGAAACATTGTTTCAGGGAAATGGGGCGGGATGGCCTATCTTGAGGCGATGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCATTAGCTTGTGGATTGAGGTGACTTTTTTGCGACTATTTTTACTTTGTCCAAGTGTAATTGCTTTCATAATAAGCAAGAGGAAAAAAGTTAATGTTTTCCCAGACAGTTTCATTGTGACAGGATTGGTTGA

mRNA sequence

GCATTATCCTCTTCGGTGAGAGCGAAAAATTCGAAGCTGGGTGGGACTTCAGTCCACGGATTTGCTATAGAATTAATTAAGTAATGAAGATTTCCTGTTCGACTACCTTCGCAAGTTTAGCTGAATCTTCAATCCATTGTCTTTCTAATCAATGGAAACCGTTGTCTCCTTTGAAATCCACGGAGAAACCAATTCCTAAGATTCTACTCTTTGGTTACCGCAATTTGTCCCTCCGACAGCCACCCCGGCGTTCGAATTCCCGGTTCCAAAATGGGTTTCGCCCACTTTGCTTCTTCAATGCTAAAGATGAATCCGGCGGCGATTTTCAGCAAAAGGGAAATGGGGCGGGATGGCCTATCTTGAGGCGATGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCATTAGCTTGTGGATTGAGACAGTTTCATTGTGACAGGATTGGTTGA

Coding sequence (CDS)

ATGAAGATTTCCTGTTCGACTACCTTCGCAAGTTTAGCTGAATCTTCAATCCATTGTCTTTCTAATCAATGGAAACCGTTGTCTCCTTTGAAATCCACGGAGAAACCAATTCCTAAGATTCTACTCTTTGGTTACCGCAATTTGTCCCTCCGACAGCCACCCCGGCGTTCGAATTCCCGGTTCCAAAATGGGTTTCGCCCACTTTGCTTCTTCAATGCTAAAGATGAATCCGGCGGCGATTTTCAGCAAAAGGGAAATGGGGCGGGATGGCCTATCTTGAGGCGATGGGAGGTGCCATGGGGATGGCAAACAGTTTCATTAACTTCATTAGCTTGTGGATTGAGACAGTTTCATTGTGACAGGATTGGTTGA
BLAST of CmoCh18G011790 vs. TrEMBL
Match: A0A0A0KQK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605040 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.8e-47
Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 1

Query: 1   MKISCSTTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSR 60
           M ISCSTTF +LAESSIHCLS+ WKPLS +K   K  PKILLFGYRNLSLR  P RSNS 
Sbjct: 1   MTISCSTTFTTLAESSIHCLSDPWKPLSSMKPIGKRTPKILLFGYRNLSLRLSPLRSNSL 60

Query: 61  FQNGFRPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
            Q+GFRPLCFFNAKDESGGDFQQK NGAGWPILRRW+VPW W TVSLTSLACGL
Sbjct: 61  SQSGFRPLCFFNAKDESGGDFQQKENGAGWPILRRWDVPWEWPTVSLTSLACGL 114

BLAST of CmoCh18G011790 vs. TrEMBL
Match: W9R209_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001018 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-17
Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 1

Query: 6   STTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQ----PPRRSNSRF 65
           S  F +  +SS+HC     K  SP K + K      L G+ + SL +    P     S  
Sbjct: 3   SRIFTNATQSSLHCFLESPKLNSP-KISAKQTNVFYLNGHGSFSLCRSNPVPGISHASLK 62

Query: 66  QNGFRPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
           +   RP+CFFNA D S  DFQ K +G+ WPIL+RWEVPW WQTVSLTSLACGL
Sbjct: 63  RRRLRPICFFNAGDNSKDDFQGKESGSEWPILKRWEVPWQWQTVSLTSLACGL 114

BLAST of CmoCh18G011790 vs. TrEMBL
Match: A0A067KYF7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15599 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.2e-17
Identity = 52/117 (44.44%), Postives = 69/117 (58.97%), Query Frame = 1

Query: 6   STTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSL-RQPPRRSNSRFQNG 65
           ST F SLA+SS++C+S+  K           +  + LF  +N  L  +P   SN  F   
Sbjct: 3   STIFTSLAQSSLYCVSDSAK-----------LSSLGLFVKQNRPLLNRPNLSSNFGFSRS 62

Query: 66  F-------RPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
           F       R +CFF+AK++S G+F  + NG  WPIL+RW+VPW WQT SLTSLACGL
Sbjct: 63  FPVHYRELRSVCFFSAKEKSNGNFDGQENGLDWPILKRWDVPWQWQTASLTSLACGL 108

BLAST of CmoCh18G011790 vs. TrEMBL
Match: Q9M9T5_ARATH (F14L17.3 protein OS=Arabidopsis thaliana GN=F14L17.3 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 46/105 (43.81%), Postives = 56/105 (53.33%), Query Frame = 1

Query: 17  IHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSRF---QNGFRPLCFFNA 76
           I CLS     L    S    +PK   +G   LS   P   S   F   +  +R  C FN+
Sbjct: 6   ISCLSQSSSLLCLSDSRRLILPKTCTYG--GLSRFSPGFASRRLFTVNRKKWRSACIFNS 65

Query: 77  KDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGLRQFH 119
             E GG+ + +G  + WPIL+RWEVPWGWQTVSLTS AC LR  H
Sbjct: 66  GKEPGGEGKLQGGSSEWPILQRWEVPWGWQTVSLTSFACALRYSH 108

BLAST of CmoCh18G011790 vs. TrEMBL
Match: A0A151RTI5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_032603 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 48/106 (45.28%), Postives = 58/106 (54.72%), Query Frame = 1

Query: 18  HCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSRFQNGFRPLCFFNAKDES 77
           H LS+ +KP S   +          F +RN  L   PR      +     +CFFNA+D+S
Sbjct: 25  HNLSSSFKPFSKQNAA---------FLHRNPFL---PRHFTLGSKTPLPSVCFFNARDKS 84

Query: 78  GGDFQQKG---------NGAGWPILRRWEVPWGWQTVSLTSLACGL 115
             +FQ K          +G GWPILRRWEVPW WQTVSLTSLACGL
Sbjct: 85  DTNFQDKALPPSPFLLESGLGWPILRRWEVPWEWQTVSLTSLACGL 118

BLAST of CmoCh18G011790 vs. TAIR10
Match: AT1G14270.1 (AT1G14270.1 CAAX amino terminal protease family protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15
Identity = 44/101 (43.56%), Postives = 54/101 (53.47%), Query Frame = 1

Query: 17  IHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSRF---QNGFRPLCFFNA 76
           I CLS     L    S    +PK   +G   LS   P   S   F   +  +R  C FN+
Sbjct: 19  ISCLSQSSSLLCLSDSRRLILPKTCTYG--GLSRFSPGFASRRLFTVNRKKWRSACIFNS 78

Query: 77  KDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
             E GG+ + +G  + WPIL+RWEVPWGWQTVSLTS AC L
Sbjct: 79  GKEPGGEGKLQGGSSEWPILQRWEVPWGWQTVSLTSFACAL 117

BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|659091049|ref|XP_008446341.1| (PREDICTED: uncharacterized protein LOC103489109 isoform X2 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48
Identity = 94/114 (82.46%), Postives = 99/114 (86.84%), Query Frame = 1

Query: 1   MKISCSTTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSR 60
           M ISCSTTF +LAESSIHCLS+ WKPLS +K   K  PKILLFGYRNLSLR  P RSNS 
Sbjct: 1   MTISCSTTFTTLAESSIHCLSDPWKPLSSMKPIGKRTPKILLFGYRNLSLRLSPLRSNSL 60

Query: 61  FQNGFRPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
            Q+GFRPLCFFNAKDESGGDFQQK NGAGWPILRRW+VPWGWQTVSLTSLACGL
Sbjct: 61  SQSGFRPLCFFNAKDESGGDFQQKENGAGWPILRRWDVPWGWQTVSLTSLACGL 114

BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|659091047|ref|XP_008446340.1| (PREDICTED: uncharacterized protein LOC103489109 isoform X1 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 3.4e-48
Identity = 94/114 (82.46%), Postives = 99/114 (86.84%), Query Frame = 1

Query: 1   MKISCSTTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSR 60
           M ISCSTTF +LAESSIHCLS+ WKPLS +K   K  PKILLFGYRNLSLR  P RSNS 
Sbjct: 1   MTISCSTTFTTLAESSIHCLSDPWKPLSSMKPIGKRTPKILLFGYRNLSLRLSPLRSNSL 60

Query: 61  FQNGFRPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
            Q+GFRPLCFFNAKDESGGDFQQK NGAGWPILRRW+VPWGWQTVSLTSLACGL
Sbjct: 61  SQSGFRPLCFFNAKDESGGDFQQKENGAGWPILRRWDVPWGWQTVSLTSLACGL 114

BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|449434788|ref|XP_004135178.1| (PREDICTED: uncharacterized protein LOC101219539 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 92/114 (80.70%), Postives = 97/114 (85.09%), Query Frame = 1

Query: 1   MKISCSTTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSNSR 60
           M ISCSTTF +LAESSIHCLS+ WKPLS +K   K  PKILLFGYRNLSLR  P RSNS 
Sbjct: 1   MTISCSTTFTTLAESSIHCLSDPWKPLSSMKPIGKRTPKILLFGYRNLSLRLSPLRSNSL 60

Query: 61  FQNGFRPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
            Q+GFRPLCFFNAKDESGGDFQQK NGAGWPILRRW+VPW W TVSLTSLACGL
Sbjct: 61  SQSGFRPLCFFNAKDESGGDFQQKENGAGWPILRRWDVPWEWPTVSLTSLACGL 114

BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|657994341|ref|XP_008389475.1| (PREDICTED: uncharacterized protein LOC103451824 [Malus domestica])

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 1

Query: 7   TTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQPPRRSN--SRFQNG 66
           T F S+A+SS  C S+  KP S    ++  IP + L G R+ +    PRRS   SR +N 
Sbjct: 16  TLFTSVAQSSFSCFSDSPKPTS----SKTQIPSLFLDGRRSFTAGFSPRRSTQLSRLRNV 75

Query: 67  FRP--LCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
             P  +CFF+   +  GDFQ+K N + W IL+RW+VPW WQT SLTSLACGL
Sbjct: 76  RNPPYICFFSGGGKPKGDFQEKENESQWLILKRWDVPWEWQTASLTSLACGL 123

BLAST of CmoCh18G011790 vs. NCBI nr
Match: gi|703099067|ref|XP_010096551.1| (hypothetical protein L484_001018 [Morus notabilis])

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17
Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 1

Query: 6   STTFASLAESSIHCLSNQWKPLSPLKSTEKPIPKILLFGYRNLSLRQ----PPRRSNSRF 65
           S  F +  +SS+HC     K  SP K + K      L G+ + SL +    P     S  
Sbjct: 3   SRIFTNATQSSLHCFLESPKLNSP-KISAKQTNVFYLNGHGSFSLCRSNPVPGISHASLK 62

Query: 66  QNGFRPLCFFNAKDESGGDFQQKGNGAGWPILRRWEVPWGWQTVSLTSLACGL 115
           +   RP+CFFNA D S  DFQ K +G+ WPIL+RWEVPW WQTVSLTSLACGL
Sbjct: 63  RRRLRPICFFNAGDNSKDDFQGKESGSEWPILKRWEVPWQWQTVSLTSLACGL 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KQK8_CUCSA9.8e-4780.70Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605040 PE=4 SV=1[more]
W9R209_9ROSA2.1e-1747.79Uncharacterized protein OS=Morus notabilis GN=L484_001018 PE=4 SV=1[more]
A0A067KYF7_JATCU6.2e-1744.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15599 PE=4 SV=1[more]
Q9M9T5_ARATH1.4e-1343.81F14L17.3 protein OS=Arabidopsis thaliana GN=F14L17.3 PE=4 SV=1[more]
A0A151RTI5_CAJCA1.4e-1345.28Uncharacterized protein OS=Cajanus cajan GN=KK1_032603 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G14270.11.8e-1543.56 CAAX amino terminal protease family protein[more]
Match NameE-valueIdentityDescription
gi|659091049|ref|XP_008446341.1|3.4e-4882.46PREDICTED: uncharacterized protein LOC103489109 isoform X2 [Cucumis melo][more]
gi|659091047|ref|XP_008446340.1|3.4e-4882.46PREDICTED: uncharacterized protein LOC103489109 isoform X1 [Cucumis melo][more]
gi|449434788|ref|XP_004135178.1|1.4e-4680.70PREDICTED: uncharacterized protein LOC101219539 [Cucumis sativus][more]
gi|657994341|ref|XP_008389475.1|1.4e-1747.32PREDICTED: uncharacterized protein LOC103451824 [Malus domestica][more]
gi|703099067|ref|XP_010096551.1|3.1e-1747.79hypothetical protein L484_001018 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G011790.1CmoCh18G011790.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10794ABHYDROLASE DOMAIN-CONTAINING PROTEINcoord: 46..114
score: 7.1
NoneNo IPR availablePANTHERPTHR10794:SF53CAAX AMINO TERMINAL PROTEASE FAMILY PROTEINcoord: 46..114
score: 7.1

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G011790Cucurbita moschata (Rifu)cmocmoB241
CmoCh18G011790Cucurbita moschata (Rifu)cmocmoB331
CmoCh18G011790Cucurbita moschata (Rifu)cmocmoB340
CmoCh18G011790Cucurbita moschata (Rifu)cmocmoB346
CmoCh18G011790Cucumber (Gy14) v1cgycmoB0265
CmoCh18G011790Cucumber (Gy14) v1cgycmoB0441
CmoCh18G011790Cucumber (Gy14) v1cgycmoB0789
CmoCh18G011790Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G011790Cucurbita maxima (Rimu)cmacmoB709
CmoCh18G011790Wild cucumber (PI 183967)cmocpiB391
CmoCh18G011790Wild cucumber (PI 183967)cmocpiB411
CmoCh18G011790Wild cucumber (PI 183967)cmocpiB415
CmoCh18G011790Cucumber (Chinese Long) v2cmocuB391
CmoCh18G011790Cucumber (Chinese Long) v2cmocuB406
CmoCh18G011790Cucumber (Chinese Long) v2cmocuB410
CmoCh18G011790Melon (DHL92) v3.5.1cmomeB344
CmoCh18G011790Melon (DHL92) v3.5.1cmomeB351
CmoCh18G011790Watermelon (Charleston Gray)cmowcgB333
CmoCh18G011790Watermelon (Charleston Gray)cmowcgB354
CmoCh18G011790Watermelon (Charleston Gray)cmowcgB358
CmoCh18G011790Watermelon (97103) v1cmowmB386
CmoCh18G011790Watermelon (97103) v1cmowmB356
CmoCh18G011790Watermelon (97103) v1cmowmB365
CmoCh18G011790Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G011790Cucurbita pepo (Zucchini)cmocpeB395
CmoCh18G011790Bottle gourd (USVL1VR-Ls)cmolsiB358
CmoCh18G011790Bottle gourd (USVL1VR-Ls)cmolsiB360
CmoCh18G011790Bottle gourd (USVL1VR-Ls)cmolsiB364
CmoCh18G011790Cucumber (Gy14) v2cgybcmoB092
CmoCh18G011790Cucumber (Gy14) v2cgybcmoB603
CmoCh18G011790Cucumber (Gy14) v2cgybcmoB608
CmoCh18G011790Melon (DHL92) v3.6.1cmomedB391
CmoCh18G011790Melon (DHL92) v3.6.1cmomedB395
CmoCh18G011790Melon (DHL92) v3.6.1cmomedB401
CmoCh18G011790Melon (DHL92) v3.6.1cmomedB415
CmoCh18G011790Silver-seed gourdcarcmoB0069
CmoCh18G011790Silver-seed gourdcarcmoB0140
CmoCh18G011790Silver-seed gourdcarcmoB1132
CmoCh18G011790Cucumber (Chinese Long) v3cmocucB0466
CmoCh18G011790Cucumber (Chinese Long) v3cmocucB0473
CmoCh18G011790Cucumber (Chinese Long) v3cmocucB0487
CmoCh18G011790Cucumber (Chinese Long) v3cmocucB0492
CmoCh18G011790Watermelon (97103) v2cmowmbB397
CmoCh18G011790Watermelon (97103) v2cmowmbB403
CmoCh18G011790Watermelon (97103) v2cmowmbB419
CmoCh18G011790Wax gourdcmowgoB0503
CmoCh18G011790Wax gourdcmowgoB0535