CmoCh18G010980 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G010980
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTranscription factor
LocationCmo_Chr18 : 11457766 .. 11459974 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGGTGCGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGTGGTTTAATGATCAAGAGCGCTCATTTTCATGCAAGTCTTGTTATAAATGCACAAAGCTTTACCATTGTGGCTTCCCTTTCACCCATTTCTTTGAATATATTTACACTCCCTCTCTCTCTGTTGCTATAAAATCTTCCTTTTCTGTGTGAGCGTCTCTGTGAGGCGCGACAGAAGCAGGGGCTGAGAGGCTCTGAGCTGAAAACTGAAAAGGGGGTTCGAACATGAAGGCGAAATTCAATGGAGTTTATTTGAAGAACAGTTTGAATGAGCTATGAAGTACTGAAAATGGTACATTATCTGAAATGGGTATCTTTCTTTTGCTCCTTTTGGTGCCGTTTTCCTTTGCTTCTTCTGCTCACTCACTGACTTAGGGCTTTGAACGTCTATTTATTGTGCTGAAATCAATGCTCTCTTCTTTGTTTTTATCAGTTGACTGCCCTTCTGCTTCTCTTTGAACTGTCGTTTTTAGCTTCTCATGCCTTTTGGGGGCTTGGGAAATGGTAGCTTCATAAATAATGTCTTCGTTGCTTCATTTTTATGCTCCCTTCTGGGTTTGTTTCGTTCTTTCAGTTTCAAGCTTCACATTCTTCCACCACCGCATCTAATTTCTTGAATTGGGTGCGTTTGTTTAAGGCTATTTCTTGTGAAAACCCCATAGATTCTGCTTGGAGTGAGTAGCAATTGTAAAGGTTGAGTGGCTTATACATCTAATGGATATTGGCGGCGGAGATCAATTTAGAGTAGAAAGTAGCCCACAGGATTGTATGTCTTTGGATATGGCTGGTTGTTCTTCTTCCACTGCTCATGTGGTTGAGTCATTTAGCTCTACCATTTGGGAACAAGCAGCTAATTCTCAAAACTTGGGACTCCTCGAAGAACATAACATATGTAGAACTTCAAACGACATAGCAATTAACAAGACCATTGGCTGTCCTATTCCTTTGAGCAGTGACAATGACAAAACACTTGATATCAGCTGGAGCTTGTCCAATAATATGTTGAAAGGGGGAGGTTACCTTAATGCAATCCCGCCGAGCTTATCTCAACTTCCAGCTGATTCTTCGTTTATTGAGCGTGCAGCCAGGTTCTCCTGGTTTAGTGGTGGAAATTTTGGTGATGTTACTGGACATTTTGATATTCCTGAGCCTATGGACGTTTTTTCTAGAGGTATGGGAGTAGTAATGCCTGAGAGACAGGAGGATGTTCCTAGACGAAACGGGTTAGGTTCGGTATCTCGAGCCGGAGGACGATTCCAGGGAAATACGGTTAACAGTGAAGCTTCCAAGCCTGTTTCTTTGCATAATGCAGCACATGGAAGCCTTTTGAAATTGGACGATTGTTGTAAACATGCTGTTGATGGTTCTGCTAATGAATCTGAGCTTAGCGGTGGCGATGGTTCGGGTGAGCCATGCACGTTAGAGGTTGCAGGTAAGGAAGTTTCTGCTAAGGGCATCGCTGCAAAGAAAAGGAAAAGGAGTGGACAGGTACTAATTAATGGTTCTTGTTCTTTTTCGCCCGCTCGTGTTGGGTGAGGAGAGTTTATCGATAATTAGCTCGTTAGTTTTGAATCTTTGCTGTCCTTTATTTTGAGTAGAAGGCTGAACTTGATCAAGTCAATGGACCTCTGCAACAAACTAGTGTTGCAGCTCAGGATAATACTGAATCTCAGCTAAAGGGAGATCAAAACCCGAGCTCGACCGCAAACAAGGGTACAGTAAAGCACGGTAAACAGGCGTCTCAACCTTTAGATCCACCAAAGGAAGAGTATATTCATGTTCGAGCTCGAAGAGGCCAGGCGACAAACAGCCATAGTCTTGCAGAAAGGGTAATGTATATTGCATTTAATCTTCCAAAGCATATTAGAGTAACTTTTCTATGCTGACTTTGAGTTCTAATACAGGTAAGGAGGGAGAAAATCAGTGAGAGGATGAAATTTCTTCAAGAACTAGTGCCTGGTTGCAGCAAGGTTTGATGGTTAAATTTGTACGTTAGACAGTCGAATCACATCGATATCAATGTTCACACGACTCTTTTTCAGGTGACTGGGAAGGCAGTGATGCTCGATGAAATCATTAACTATGTTCAGTCTCTGCAACGACAAGTCGAGGTACGAAAATCCGTTTATATGCTTCACAGCTTTAGTATATTCTTGAGATAG

mRNA sequence

ATGGTTTTGGTGCGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGTGGTTTAATGATCAAGAGCGCTCATTTTCATGCAAGTCTTGTTGAGTGGCTTATACATCTAATGGATATTGGCGGCGGAGATCAATTTAGAGTAGAAAGTAGCCCACAGGATTGTATGTCTTTGGATATGGCTGGTTGTTCTTCTTCCACTGCTCATGTGGTTGAGTCATTTAGCTCTACCATTTGGGAACAAGCAGCTAATTCTCAAAACTTGGGACTCCTCGAAGAACATAACATATGTAGAACTTCAAACGACATAGCAATTAACAAGACCATTGGCTGTCCTATTCCTTTGAGCAGTGACAATGACAAAACACTTGATATCAGCTGGAGCTTGTCCAATAATATGTTGAAAGGGGGAGGTTACCTTAATGCAATCCCGCCGAGCTTATCTCAACTTCCAGCTGATTCTTCGTTTATTGAGCGTGCAGCCAGGTTCTCCTGGTTTAGTGGTGGAAATTTTGGTGATGTTACTGGACATTTTGATATTCCTGAGCCTATGGACGTTTTTTCTAGAGGTATGGGAGTAGTAATGCCTGAGAGACAGGAGGATGTTCCTAGACGAAACGGGTTAGGTTCGGTATCTCGAGCCGGAGGACGATTCCAGGGAAATACGGTTAACAGTGAAGCTTCCAAGCCTGTTTCTTTGCATAATGCAGCACATGGAAGCCTTTTGAAATTGGACGATTGTTGTAAACATGCTGTTGATGGTTCTGCTAATGAATCTGAGCTTAGCGGTGGCGATGGTTCGGGTGAGCCATGCACGTTAGAGGTTGCAGGTAAGGAAGTTTCTGCTAAGGGCATCGCTGCAAAGAAAAGGAAAAGGAGTGGACAGAAGGCTGAACTTGATCAAGTCAATGGACCTCTGCAACAAACTAGTGTTGCAGCTCAGGATAATACTGAATCTCAGCTAAAGGGAGATCAAAACCCGAGCTCGACCGCAAACAAGGGTACAGTAAAGCACGGTAAACAGGCGTCTCAACCTTTAGATCCACCAAAGGAAGAGTATATTCATGTTCGAGCTCGAAGAGGCCAGGCGACAAACAGCCATAGTCTTGCAGAAAGGGTAAGGAGGGAGAAAATCAGTGAGAGGATGAAATTTCTTCAAGAACTAGTGCCTGGTTGCAGCAAGGTGACTGGGAAGGCAGTGATGCTCGATGAAATCATTAACTATGTTCAGTCTCTGCAACGACAAGTCGAGGTACGAAAATCCGTTTATATGCTTCACAGCTTTAGTATATTCTTGAGATAG

Coding sequence (CDS)

ATGGTTTTGGTGCGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGTGGTTTAATGATCAAGAGCGCTCATTTTCATGCAAGTCTTGTTGAGTGGCTTATACATCTAATGGATATTGGCGGCGGAGATCAATTTAGAGTAGAAAGTAGCCCACAGGATTGTATGTCTTTGGATATGGCTGGTTGTTCTTCTTCCACTGCTCATGTGGTTGAGTCATTTAGCTCTACCATTTGGGAACAAGCAGCTAATTCTCAAAACTTGGGACTCCTCGAAGAACATAACATATGTAGAACTTCAAACGACATAGCAATTAACAAGACCATTGGCTGTCCTATTCCTTTGAGCAGTGACAATGACAAAACACTTGATATCAGCTGGAGCTTGTCCAATAATATGTTGAAAGGGGGAGGTTACCTTAATGCAATCCCGCCGAGCTTATCTCAACTTCCAGCTGATTCTTCGTTTATTGAGCGTGCAGCCAGGTTCTCCTGGTTTAGTGGTGGAAATTTTGGTGATGTTACTGGACATTTTGATATTCCTGAGCCTATGGACGTTTTTTCTAGAGGTATGGGAGTAGTAATGCCTGAGAGACAGGAGGATGTTCCTAGACGAAACGGGTTAGGTTCGGTATCTCGAGCCGGAGGACGATTCCAGGGAAATACGGTTAACAGTGAAGCTTCCAAGCCTGTTTCTTTGCATAATGCAGCACATGGAAGCCTTTTGAAATTGGACGATTGTTGTAAACATGCTGTTGATGGTTCTGCTAATGAATCTGAGCTTAGCGGTGGCGATGGTTCGGGTGAGCCATGCACGTTAGAGGTTGCAGGTAAGGAAGTTTCTGCTAAGGGCATCGCTGCAAAGAAAAGGAAAAGGAGTGGACAGAAGGCTGAACTTGATCAAGTCAATGGACCTCTGCAACAAACTAGTGTTGCAGCTCAGGATAATACTGAATCTCAGCTAAAGGGAGATCAAAACCCGAGCTCGACCGCAAACAAGGGTACAGTAAAGCACGGTAAACAGGCGTCTCAACCTTTAGATCCACCAAAGGAAGAGTATATTCATGTTCGAGCTCGAAGAGGCCAGGCGACAAACAGCCATAGTCTTGCAGAAAGGGTAAGGAGGGAGAAAATCAGTGAGAGGATGAAATTTCTTCAAGAACTAGTGCCTGGTTGCAGCAAGGTGACTGGGAAGGCAGTGATGCTCGATGAAATCATTAACTATGTTCAGTCTCTGCAACGACAAGTCGAGGTACGAAAATCCGTTTATATGCTTCACAGCTTTAGTATATTCTTGAGATAG
Homology
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BLAST of CmoCh18G010980 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.2e-53
Identity = 163/386 (42.23%), Postives = 214/386 (55.44%), Query Frame = 1 

Query: 46  FRVESSP-QDCMSLDMAGCSSSTAHVVESFSSTIWEQAANSQNLGLLEEHNICRTSNDIA 105
           +RV+S P ++ +S   A CS S   +++SF  T+W    + Q +G    +    +S+   
Sbjct: 29  WRVDSYPSENLISAGPASCSPS--QMMDSFGQTLWYDPTSVQAVGYAGFNGGNASSSSFR 88

Query: 106 INKTIGCPIPLSSDNDKTLDISWSLSNNML-KGGGYL--NA---IPPSLSQLPADSSFIE 165
                          D++L++ W+L N +  KG G    NA   +PPS++Q PADS FIE
Sbjct: 89  ------------GSIDRSLEMGWNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIE 148

Query: 166 RAARFSWFSGGNFGDVTGH-FDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGR 225
           RAARFS FSGGNF D+        E + +F +G G +                     G+
Sbjct: 149 RAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQ--------------------GQ 208

Query: 226 FQGNTVN-SEASKPVSLHNAAHGSLLKLDDCCKHAVDGSANESE---LSGGDGSGEPCTL 285
            Q N +N  E    VS+  A   S ++  +  K  V GS N SE    SGG+G       
Sbjct: 209 CQSNELNVGEPHNDVSV--AVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQ------ 268

Query: 286 EVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANK 345
              G+E S+     KKRKR+GQK      +   QQ+     +N + +   +Q+P+S   K
Sbjct: 269 --KGRETSSN---TKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKK 328

Query: 346 GTV--KHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPG 405
                + GKQ+S   DPPK+ YIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPG
Sbjct: 329 SNSGKQQGKQSS---DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 364

Query: 406 CSKVTGKAVMLDEIINYVQSLQRQVE 418
           C+KVTGKAVMLDEIINYVQSLQRQVE
Sbjct: 389 CNKVTGKAVMLDEIINYVQSLQRQVE 364

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BLAST of CmoCh18G010980 vs. Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-36
Identity = 116/272 (42.65%), Postives = 153/272 (56.25%), Query Frame = 1 

Query: 146 SLSQLPADSSFIERAARFSWFSGGNFGDVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRR 205
           +++Q PADS FIERAA+FS+F                       G G +M  +Q+     
Sbjct: 73  NMAQFPADSGFIERAAKFSFF-----------------------GCGEMMMNQQQ----- 132

Query: 206 NGLGSVSRAGGRFQGNTVNSEASKPVSLHNAAHGSLLKLDDCCKHAVDGSANESELSGGD 265
           + LG V  + G F  +T     SK   L N       KL    + +++  + +S+ SGG+
Sbjct: 133 SSLG-VPDSTGLFLQDTQIPSGSK---LDNGPLTDASKLVK--ERSINNVSEDSQSSGGN 192

Query: 266 GSGEPCTLEVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQ 325
           G  +         + S+KG ++KKRKR G+  E ++                + + K +Q
Sbjct: 193 GHDD-----AKCGQTSSKGFSSKKRKRIGKDCEEEE----------------DKKQKDEQ 252

Query: 326 NPSSTANKGTVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 385
           +P+S ANK   +      QP D  K+ YIH+RARRGQATNSHSLAERVRREKISERMKFL
Sbjct: 253 SPTSNANKTNSE-----KQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFL 284

Query: 386 QELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 418
           Q+LVPGC KVTGKAVMLDEIINYVQSLQ Q+E
Sbjct: 313 QDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 284

[Close]
BLAST of CmoCh18G010980 vs. Swiss-Prot
Match: BH074_ARATH (Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.0e-27
Identity = 88/183 (48.09%), Postives = 110/183 (60.11%), Query Frame = 1 

Query: 240 SLLKLDDCCKHAVD---GSANESE--LSGGDGSGEPCTLEVAGKEVSAKGIAAKKRKRSG 299
           SLL   DC    +    GS  + E  +  G+ S E    +V+   V       K+R    
Sbjct: 94  SLLPFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDHH-QVSDDAVLGASPVGKRRLPEA 153

Query: 300 QKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGKQASQPLDPPKEEYI 359
           +     +     Q+      D ++ + K DQ+      K TV   K++SQ  + PKE YI
Sbjct: 154 ESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQS------KETVN--KESSQSEEAPKENYI 213

Query: 360 HVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQR 418
           H+RARRGQATNSHSLAERVRREKISERM+ LQELVPGC+K+TGKAVMLDEIINYVQSLQ+
Sbjct: 214 HMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 267

[Close]
BLAST of CmoCh18G010980 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.7e-26
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 1 

Query: 307 QQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGKQASQPLDPPKEEYIHVRARRGQATNS 366
           Q +  A   + E + K D +P     K + ++G + ++ +DP K+ YIHVRARRGQAT+S
Sbjct: 213 QNSPSAVSSSKEIEEKEDSDPKRC--KKSEENGDK-TKSIDPYKD-YIHVRARRGQATDS 272

Query: 367 HSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 418
           HSLAERVRREKISERMK LQ+LVPGC+KVTGKA+MLDEIINYVQSLQRQVE
Sbjct: 273 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319

[Close]
BLAST of CmoCh18G010980 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.3e-25
Identity = 78/164 (47.56%), Postives = 101/164 (61.59%), Query Frame = 1 

Query: 254 GSANESELSGGDGSGEPCTLEVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAA 313
           G  +    S   G  +   +  A    S    A K   + G K+  ++  G  ++     
Sbjct: 216 GEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSS-EEKGGKRRREE--- 275

Query: 314 QDNTESQLKGDQNPSSTANKGTVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERV 373
           +D+ E + +G+ N S+             ++P +PPK+ YIHVRARRGQAT+SHSLAERV
Sbjct: 276 EDDEEEEGEGEGNKSNN------------TKPPEPPKD-YIHVRARRGQATDSHSLAERV 335

Query: 374 RREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 418
           RREKI ERMK LQ+LVPGC+KVTGKA+MLDEIINYVQSLQRQVE
Sbjct: 336 RREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362

[Close]
BLAST of CmoCh18G010980 vs. TrEMBL
Match: A0A0A0KR06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G607470 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 4.0e-135
Identity = 270/377 (71.62%), Postives = 302/377 (80.11%), Query Frame = 1 

Query: 59  DMAGCSSSTAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPLS 118
           DM GCSSSTA +VESFSSTIWEQ+A+ QNLG+  ++ HNI  TSN I I+K  GCP+  S
Sbjct: 56  DMVGCSSSTASMVESFSSTIWEQSAHCQNLGISNIQGHNISNTSNIIGISKASGCPVSSS 115

Query: 119 SDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNFG 178
           SD D+TLDISW+LS+NMLKGG YL      +PPSLSQLPADSSFIERAAR S FSGGNFG
Sbjct: 116 SDIDRTLDISWNLSHNMLKGGVYLPNFPGMLPPSLSQLPADSSFIERAARLSCFSGGNFG 175

Query: 179 DVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNSEASKPVS 238
              GHF++P+P+ VFSRGMGV+ PER +++P RNGLG  S  GG+ Q N VNSE+S PV 
Sbjct: 176 GDVGHFNVPDPVGVFSRGMGVI-PERWDEIP-RNGLGLASGTGGQSQRNVVNSESSMPVC 235

Query: 239 LHN---------AAHGSLLKLDDCCKHAVDGSANES---ELSGGDGSGEPCTLEVAGKEV 298
           L N           +GS LKLD   K AVDGSANES   E SGGDG GEPCTLE  GKE+
Sbjct: 236 LTNEHGATERDSPKNGSPLKLDGRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKEL 295

Query: 299 SAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGK 358
           S KG+  +KRKRSGQK ELDQ NGPLQQT+V+ +D+ E+Q K DQNP+STANKGT KHGK
Sbjct: 296 STKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGK 355

Query: 359 QASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 418
           QASQP DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV
Sbjct: 356 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 415

[Close]
BLAST of CmoCh18G010980 vs. TrEMBL
Match: V4ST89_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031122mg PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.1e-88
Identity = 213/384 (55.47%), Postives = 257/384 (66.93%), Query Frame = 1 

Query: 58  LDMAGCSSSTAHVVESFSSTIWEQAANSQNLGLLE---EHNICRTSNDIAINKTIGCPIP 117
           L +   S S+A +V+SF+ TIW+   NSQ+LG      +HN   +SN + I K  G    
Sbjct: 51  LGVGSSSCSSAPMVDSFNQTIWDHPTNSQSLGYCNIDAQHN-ASSSNALGIRK--GSSAS 110

Query: 118 LSSDNDKTLDISWSLSNNMLKGGGYL-NA---IPPSLSQLPADSSFIERAARFSWFSGGN 177
           L S  D+ LDI W+ +++M+KGG +L NA    P SLSQ PADS+FIERAARFS FSGGN
Sbjct: 111 LRSCIDRPLDIGWNPASSMIKGGIFLPNAPGMFPQSLSQFPADSAFIERAARFSSFSGGN 170

Query: 178 FGDVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVN-SEASK 237
           F D+   F  PEP  ++SRG G  M +  ++V   NGL S+S  GG+ Q N +N +E SK
Sbjct: 171 FCDMMNTFGTPEPTGLYSRGRG--MMQGPQEVFAGNGLKSLS--GGQSQKNEMNVAEVSK 230

Query: 238 PVSL---HNAAHGSLLKLDDCCKHAVD-------------GSANESELSGGDGSGEPCTL 297
             SL   H A+ GS LK +   +  V+             G ++E+E SGG G  EP  +
Sbjct: 231 DASLSVEHGASDGSTLKNERKGESLVNSHGEAKQGVGGSGGDSDEAEFSGGGGQDEPSAV 290

Query: 298 EVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANK 357
           E  G E SAKG+++KKRKR+GQ  E DQ  G  Q +  AA+DNTE+Q KGD  PSST NK
Sbjct: 291 EGTGGEPSAKGLSSKKRKRNGQDIEFDQAKGG-QSSGEAAKDNTENQRKGDHKPSSTGNK 350

Query: 358 GTVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCS 417
              K GKQ SQ  DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCS
Sbjct: 351 SAGKQGKQGSQTSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCS 410

[Close]
BLAST of CmoCh18G010980 vs. TrEMBL
Match: B9HWS9_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14600g PE=4 SV=2)

HSP 1 Score: 332.4 bits (851), Expect = 8.2e-88
Identity = 209/383 (54.57%), Postives = 254/383 (66.32%), Query Frame = 1 

Query: 59  DMAGCSS-STAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPL 118
           D+ G +S S+A V++SF   +WE   NSQNL    +   NI  +SN + I K  G P  L
Sbjct: 58  DLVGAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINVQNIASSSNTVGIGK--GAPASL 117

Query: 119 SSDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNF 178
            +  D+TL++ W+  N+MLKGG +L      +P SLSQ PADS+FIERAARFS F+GG+F
Sbjct: 118 RNGIDRTLEMGWNPPNSMLKGGIFLPNAPGVLPQSLSQFPADSAFIERAARFSCFNGGDF 177

Query: 179 GDVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNS-EASKP 238
           GD+   F +PE M +FSRG G++    +  V    G G  S +GG+ Q N +N+ EASK 
Sbjct: 178 GDMVNPFGVPESMGLFSRGGGMMQGPGEVFV----GSGMKSVSGGQAQKNVMNAGEASKD 237

Query: 239 VSL---HNAAHGSLLKLD----------DCCKHAVDGSANES---ELSGGDGSGEPCTLE 298
           VS+   H A  GS LK +          D  K  V GS N+S   E SGG G  EP  LE
Sbjct: 238 VSMSVDHMATEGSPLKNETKRESLARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLE 297

Query: 299 VAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKG 358
               E+SAK + +KKRKRSG+ AELDQ  G    T  +A+ + E+Q KGDQ P+ST +K 
Sbjct: 298 GNCGELSAKSLGSKKRKRSGEDAELDQAKG----TPQSAKGSPETQQKGDQKPTSTTSKA 357

Query: 359 TVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSK 418
           + K GKQ SQ  D PKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSK
Sbjct: 358 SGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 417

[Close]
BLAST of CmoCh18G010980 vs. TrEMBL
Match: B9RLE7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466300 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85
Identity = 210/382 (54.97%), Postives = 250/382 (65.45%), Query Frame = 1 

Query: 59  DMAGCSS-STAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPL 118
           D+ G SS STA +V+SF   +W+ + NS NLG   +   N   TSN I   K+   P  L
Sbjct: 58  DLLGASSCSTASMVDSFGPGLWDHSTNSLNLGFCDINVQNHPSTSNTIGHRKS--GPTSL 117

Query: 119 SSDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNF 178
               DK L + W+  ++MLKGG +L      +P SLSQ PADS+FIERAARFS F+GGNF
Sbjct: 118 RVGTDKALQMGWNPPSSMLKGGIFLPSAPGVLPQSLSQFPADSAFIERAARFSCFNGGNF 177

Query: 179 GDVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGN-TVNSEASKP 238
            D+   F IPE M ++SR  G  M +  ++V   +GL +V+  GG+ Q N T+  E SK 
Sbjct: 178 SDMMNPFGIPESMGLYSRSGG--MMQGPQEVFAASGLKTVT--GGQGQNNVTIVGETSKD 237

Query: 239 VSL---HNAAHG---------SLLKLDDCCKHAVDGSANESE---LSGGDGSGEPCTLEV 298
            S+   H A  G         SL++ +D  K    GS +ESE    SGG G  E  TLE 
Sbjct: 238 ASMSIEHVAIEGPLKNERKSDSLVRSNDEAKQGAGGSGDESEEAEFSGGGGQEEASTLEG 297

Query: 299 AGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGT 358
            G E+SAK +  KKRKR+GQ  ELDQ  G LQ    AA+DN E+Q KGDQ P+ST NK +
Sbjct: 298 NGMELSAKSLGLKKRKRNGQDIELDQAKGNLQSVE-AAKDNVEAQQKGDQTPTSTPNKTS 357

Query: 359 VKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKV 418
            K GKQ SQ  DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKV
Sbjct: 358 GKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKV 417

[Close]
BLAST of CmoCh18G010980 vs. TrEMBL
Match: A0A067K8S8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11799 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 6.5e-85
Identity = 212/383 (55.35%), Postives = 253/383 (66.06%), Query Frame = 1 

Query: 59  DMAGCSS-STAHVVESFSSTIWEQAANSQNLGLLEEH--NICRTSNDIAINKTIGCPIPL 118
           D+ G SS S+A +V+SFS  +W+ +ANSQNLG  + +  +   TSN I I K  G P   
Sbjct: 56  DLVGVSSCSSASMVDSFSPGLWDHSANSQNLGFCDINLQSNASTSNPIGIRK--GGPGSS 115

Query: 119 SSDNDKTLDISWSLSNNMLKGGGYLNAIP----PSLSQLPADSSFIERAARFSWFSGGNF 178
               DK LD+ W+  ++MLK G +L ++P     SLSQ P DS+FIERAARFS F+GGNF
Sbjct: 116 RGGIDKMLDMGWTSPSSMLKAGMFLPSVPGVLPQSLSQFPTDSAFIERAARFSSFNGGNF 175

Query: 179 GDVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVN-SEASKP 238
            D+   F I E M ++SRG G  M +  +++   +GL +VS  GG+ Q N +N  E SK 
Sbjct: 176 SDMVNPFGISESMALYSRGGG--MMQGPQEIFAGSGLKAVS--GGQSQKNVMNLGEGSKD 235

Query: 239 VSL---HNAAHGSLLKLD----------DCCKHAVDGSANESE---LSGGDGSGEPCTLE 298
            SL   H A  GS LK +          D  K AV GS N+SE    SGG    EP  LE
Sbjct: 236 ASLSVEHVAIGGSPLKNERRSESLVRSHDEAKQAVGGSGNDSEEAEFSGGGHQDEPSMLE 295

Query: 299 VAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKG 358
             G E+SAK   +KKRK +GQ  ELDQ  G  QQ+  AA+DNTE Q KGDQN +S +NK 
Sbjct: 296 GNGGELSAKSFGSKKRKTNGQDTELDQTKGS-QQSVEAAKDNTEVQQKGDQNLNSASNKT 355

Query: 359 TVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSK 418
             K GKQ SQ  DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMK+LQ+LVPGCSK
Sbjct: 356 AGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSK 415

[Close]
BLAST of CmoCh18G010980 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.8e-54
Identity = 163/386 (42.23%), Postives = 214/386 (55.44%), Query Frame = 1 

Query: 46  FRVESSP-QDCMSLDMAGCSSSTAHVVESFSSTIWEQAANSQNLGLLEEHNICRTSNDIA 105
           +RV+S P ++ +S   A CS S   +++SF  T+W    + Q +G    +    +S+   
Sbjct: 29  WRVDSYPSENLISAGPASCSPS--QMMDSFGQTLWYDPTSVQAVGYAGFNGGNASSSSFR 88

Query: 106 INKTIGCPIPLSSDNDKTLDISWSLSNNML-KGGGYL--NA---IPPSLSQLPADSSFIE 165
                          D++L++ W+L N +  KG G    NA   +PPS++Q PADS FIE
Sbjct: 89  ------------GSIDRSLEMGWNLPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIE 148

Query: 166 RAARFSWFSGGNFGDVTGH-FDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGR 225
           RAARFS FSGGNF D+        E + +F +G G +                     G+
Sbjct: 149 RAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQ--------------------GQ 208

Query: 226 FQGNTVN-SEASKPVSLHNAAHGSLLKLDDCCKHAVDGSANESE---LSGGDGSGEPCTL 285
            Q N +N  E    VS+  A   S ++  +  K  V GS N SE    SGG+G       
Sbjct: 209 CQSNELNVGEPHNDVSV--AVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQ------ 268

Query: 286 EVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANK 345
              G+E S+     KKRKR+GQK      +   QQ+     +N + +   +Q+P+S   K
Sbjct: 269 --KGRETSSN---TKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKK 328

Query: 346 GTV--KHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPG 405
                + GKQ+S   DPPK+ YIHVRARRGQATNSHSLAERVRREKISERMKFLQ+LVPG
Sbjct: 329 SNSGKQQGKQSS---DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPG 364

Query: 406 CSKVTGKAVMLDEIINYVQSLQRQVE 418
           C+KVTGKAVMLDEIINYVQSLQRQVE
Sbjct: 389 CNKVTGKAVMLDEIINYVQSLQRQVE 364

[Close]
BLAST of CmoCh18G010980 vs. TAIR10
Match: AT1G26260.1 (AT1G26260.1 cryptochrome-interacting basic-helix-loop-helix 5)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-37
Identity = 116/272 (42.65%), Postives = 153/272 (56.25%), Query Frame = 1 

Query: 146 SLSQLPADSSFIERAARFSWFSGGNFGDVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRR 205
           +++Q PADS FIERAA+FS+F                       G G +M  +Q+     
Sbjct: 73  NMAQFPADSGFIERAAKFSFF-----------------------GCGEMMMNQQQ----- 132

Query: 206 NGLGSVSRAGGRFQGNTVNSEASKPVSLHNAAHGSLLKLDDCCKHAVDGSANESELSGGD 265
           + LG V  + G F  +T     SK   L N       KL    + +++  + +S+ SGG+
Sbjct: 133 SSLG-VPDSTGLFLQDTQIPSGSK---LDNGPLTDASKLVK--ERSINNVSEDSQSSGGN 192

Query: 266 GSGEPCTLEVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQ 325
           G  +         + S+KG ++KKRKR G+  E ++                + + K +Q
Sbjct: 193 GHDD-----AKCGQTSSKGFSSKKRKRIGKDCEEEE----------------DKKQKDEQ 252

Query: 326 NPSSTANKGTVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 385
           +P+S ANK   +      QP D  K+ YIH+RARRGQATNSHSLAERVRREKISERMKFL
Sbjct: 253 SPTSNANKTNSE-----KQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFL 284

Query: 386 QELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 418
           Q+LVPGC KVTGKAVMLDEIINYVQSLQ Q+E
Sbjct: 313 QDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE 284

[Close]
BLAST of CmoCh18G010980 vs. TAIR10
Match: AT1G10120.1 (AT1G10120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28
Identity = 88/183 (48.09%), Postives = 110/183 (60.11%), Query Frame = 1 

Query: 240 SLLKLDDCCKHAVD---GSANESE--LSGGDGSGEPCTLEVAGKEVSAKGIAAKKRKRSG 299
           SLL   DC    +    GS  + E  +  G+ S E    +V+   V       K+R    
Sbjct: 94  SLLPFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDHH-QVSDDAVLGASPVGKRRLPEA 153

Query: 300 QKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGKQASQPLDPPKEEYI 359
           +     +     Q+      D ++ + K DQ+      K TV   K++SQ  + PKE YI
Sbjct: 154 ESQWNKKAVEEFQEDPQRGNDQSQKKHKNDQS------KETVN--KESSQSEEAPKENYI 213

Query: 360 HVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQR 418
           H+RARRGQATNSHSLAERVRREKISERM+ LQELVPGC+K+TGKAVMLDEIINYVQSLQ+
Sbjct: 214 HMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 267

[Close]
BLAST of CmoCh18G010980 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-27
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 1 

Query: 307 QQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGKQASQPLDPPKEEYIHVRARRGQATNS 366
           Q +  A   + E + K D +P     K + ++G + ++ +DP K+ YIHVRARRGQAT+S
Sbjct: 213 QNSPSAVSSSKEIEEKEDSDPKRC--KKSEENGDK-TKSIDPYKD-YIHVRARRGQATDS 272

Query: 367 HSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 418
           HSLAERVRREKISERMK LQ+LVPGC+KVTGKA+MLDEIINYVQSLQRQVE
Sbjct: 273 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319

[Close]
BLAST of CmoCh18G010980 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-26
Identity = 78/164 (47.56%), Postives = 101/164 (61.59%), Query Frame = 1 

Query: 254 GSANESELSGGDGSGEPCTLEVAGKEVSAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAA 313
           G  +    S   G  +   +  A    S    A K   + G K+  ++  G  ++     
Sbjct: 216 GEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSS-EEKGGKRRREE--- 275

Query: 314 QDNTESQLKGDQNPSSTANKGTVKHGKQASQPLDPPKEEYIHVRARRGQATNSHSLAERV 373
           +D+ E + +G+ N S+             ++P +PPK+ YIHVRARRGQAT+SHSLAERV
Sbjct: 276 EDDEEEEGEGEGNKSNN------------TKPPEPPKD-YIHVRARRGQATDSHSLAERV 335

Query: 374 RREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 418
           RREKI ERMK LQ+LVPGC+KVTGKA+MLDEIINYVQSLQRQVE
Sbjct: 336 RREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362

[Close]
BLAST of CmoCh18G010980 vs. NCBI nr
Match: gi|659091316|ref|XP_008446486.1| (PREDICTED: transcription factor bHLH49 isoform X1 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 6.1e-137
Identity = 272/377 (72.15%), Postives = 305/377 (80.90%), Query Frame = 1 

Query: 59  DMAGCSSSTAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPLS 118
           DM GCSSSTA VVESFSSTIWEQ+A+SQNLG+  ++ HN   TSN I I+K  GCP+  S
Sbjct: 65  DMVGCSSSTASVVESFSSTIWEQSAHSQNLGISNIQGHNNSNTSNIIGISKASGCPVSSS 124

Query: 119 SDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNFG 178
           SD D+TLDISW+LS+N+LKGG YL      +PPSLSQLPADSSFIERAAR S FSGGNFG
Sbjct: 125 SDIDRTLDISWNLSHNILKGGVYLPNIPGMLPPSLSQLPADSSFIERAARLSCFSGGNFG 184

Query: 179 DVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNSEASKPVS 238
           D+ GHF+IP+P+ VFSRGMGV+ P+R +++P RNGLG  S  GG+ Q N +NSE SKPV 
Sbjct: 185 DIVGHFNIPDPVGVFSRGMGVI-PDRWDEIP-RNGLGLASVTGGQSQRNVINSETSKPVC 244

Query: 239 LHN---------AAHGSLLKLDDCCKHAVDGSANES---ELSGGDGSGEPCTLEVAGKEV 298
           L N           +GS LKLDD  K AVDGSANES   E SGGDG GEPCTLE  GKE+
Sbjct: 245 LTNEHGATETDSPKNGSPLKLDDRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKEL 304

Query: 299 SAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGK 358
           SAKG+  +KRKRSGQK ELDQ NGPLQQT+V+ +D+ E+  K DQNP+STANKGT KHGK
Sbjct: 305 SAKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETHRKRDQNPNSTANKGTGKHGK 364

Query: 359 QASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 418
           QASQP DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV
Sbjct: 365 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 424

[Close]
BLAST of CmoCh18G010980 vs. NCBI nr
Match: gi|659091320|ref|XP_008446489.1| (PREDICTED: transcription factor bHLH49 isoform X3 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 6.1e-137
Identity = 272/377 (72.15%), Postives = 305/377 (80.90%), Query Frame = 1 

Query: 59  DMAGCSSSTAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPLS 118
           DM GCSSSTA VVESFSSTIWEQ+A+SQNLG+  ++ HN   TSN I I+K  GCP+  S
Sbjct: 56  DMVGCSSSTASVVESFSSTIWEQSAHSQNLGISNIQGHNNSNTSNIIGISKASGCPVSSS 115

Query: 119 SDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNFG 178
           SD D+TLDISW+LS+N+LKGG YL      +PPSLSQLPADSSFIERAAR S FSGGNFG
Sbjct: 116 SDIDRTLDISWNLSHNILKGGVYLPNIPGMLPPSLSQLPADSSFIERAARLSCFSGGNFG 175

Query: 179 DVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNSEASKPVS 238
           D+ GHF+IP+P+ VFSRGMGV+ P+R +++P RNGLG  S  GG+ Q N +NSE SKPV 
Sbjct: 176 DIVGHFNIPDPVGVFSRGMGVI-PDRWDEIP-RNGLGLASVTGGQSQRNVINSETSKPVC 235

Query: 239 LHN---------AAHGSLLKLDDCCKHAVDGSANES---ELSGGDGSGEPCTLEVAGKEV 298
           L N           +GS LKLDD  K AVDGSANES   E SGGDG GEPCTLE  GKE+
Sbjct: 236 LTNEHGATETDSPKNGSPLKLDDRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKEL 295

Query: 299 SAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGK 358
           SAKG+  +KRKRSGQK ELDQ NGPLQQT+V+ +D+ E+  K DQNP+STANKGT KHGK
Sbjct: 296 SAKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETHRKRDQNPNSTANKGTGKHGK 355

Query: 359 QASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 418
           QASQP DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV
Sbjct: 356 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 415

[Close]
BLAST of CmoCh18G010980 vs. NCBI nr
Match: gi|449434704|ref|XP_004135136.1| (PREDICTED: transcription factor bHLH49 isoform X3 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 5.7e-135
Identity = 270/377 (71.62%), Postives = 302/377 (80.11%), Query Frame = 1 

Query: 59  DMAGCSSSTAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPLS 118
           DM GCSSSTA +VESFSSTIWEQ+A+ QNLG+  ++ HNI  TSN I I+K  GCP+  S
Sbjct: 56  DMVGCSSSTASMVESFSSTIWEQSAHCQNLGISNIQGHNISNTSNIIGISKASGCPVSSS 115

Query: 119 SDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNFG 178
           SD D+TLDISW+LS+NMLKGG YL      +PPSLSQLPADSSFIERAAR S FSGGNFG
Sbjct: 116 SDIDRTLDISWNLSHNMLKGGVYLPNFPGMLPPSLSQLPADSSFIERAARLSCFSGGNFG 175

Query: 179 DVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNSEASKPVS 238
              GHF++P+P+ VFSRGMGV+ PER +++P RNGLG  S  GG+ Q N VNSE+S PV 
Sbjct: 176 GDVGHFNVPDPVGVFSRGMGVI-PERWDEIP-RNGLGLASGTGGQSQRNVVNSESSMPVC 235

Query: 239 LHN---------AAHGSLLKLDDCCKHAVDGSANES---ELSGGDGSGEPCTLEVAGKEV 298
           L N           +GS LKLD   K AVDGSANES   E SGGDG GEPCTLE  GKE+
Sbjct: 236 LTNEHGATERDSPKNGSPLKLDGRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKEL 295

Query: 299 SAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGK 358
           S KG+  +KRKRSGQK ELDQ NGPLQQT+V+ +D+ E+Q K DQNP+STANKGT KHGK
Sbjct: 296 STKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGK 355

Query: 359 QASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 418
           QASQP DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV
Sbjct: 356 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 415

[Close]
BLAST of CmoCh18G010980 vs. NCBI nr
Match: gi|778705720|ref|XP_011655727.1| (PREDICTED: transcription factor bHLH49 isoform X1 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 5.7e-135
Identity = 270/377 (71.62%), Postives = 302/377 (80.11%), Query Frame = 1 

Query: 59  DMAGCSSSTAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPLS 118
           DM GCSSSTA +VESFSSTIWEQ+A+ QNLG+  ++ HNI  TSN I I+K  GCP+  S
Sbjct: 65  DMVGCSSSTASMVESFSSTIWEQSAHCQNLGISNIQGHNISNTSNIIGISKASGCPVSSS 124

Query: 119 SDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNFG 178
           SD D+TLDISW+LS+NMLKGG YL      +PPSLSQLPADSSFIERAAR S FSGGNFG
Sbjct: 125 SDIDRTLDISWNLSHNMLKGGVYLPNFPGMLPPSLSQLPADSSFIERAARLSCFSGGNFG 184

Query: 179 DVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNSEASKPVS 238
              GHF++P+P+ VFSRGMGV+ PER +++P RNGLG  S  GG+ Q N VNSE+S PV 
Sbjct: 185 GDVGHFNVPDPVGVFSRGMGVI-PERWDEIP-RNGLGLASGTGGQSQRNVVNSESSMPVC 244

Query: 239 LHN---------AAHGSLLKLDDCCKHAVDGSANES---ELSGGDGSGEPCTLEVAGKEV 298
           L N           +GS LKLD   K AVDGSANES   E SGGDG GEPCTLE  GKE+
Sbjct: 245 LTNEHGATERDSPKNGSPLKLDGRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKEL 304

Query: 299 SAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGK 358
           S KG+  +KRKRSGQK ELDQ NGPLQQT+V+ +D+ E+Q K DQNP+STANKGT KHGK
Sbjct: 305 STKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANKGTGKHGK 364

Query: 359 QASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 418
           QASQP DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV
Sbjct: 365 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 424

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BLAST of CmoCh18G010980 vs. NCBI nr
Match: gi|659091318|ref|XP_008446487.1| (PREDICTED: transcription factor bHLH49 isoform X2 [Cucumis melo])

HSP 1 Score: 489.6 bits (1259), Expect = 5.7e-135
Identity = 271/377 (71.88%), Postives = 304/377 (80.64%), Query Frame = 1 

Query: 59  DMAGCSSSTAHVVESFSSTIWEQAANSQNLGL--LEEHNICRTSNDIAINKTIGCPIPLS 118
           DM GCSSSTA VVESFSSTIWEQ+A+SQNLG+  ++ HN   TSN I I+K  GCP+  S
Sbjct: 65  DMVGCSSSTASVVESFSSTIWEQSAHSQNLGISNIQGHNNSNTSNIIGISKASGCPVSSS 124

Query: 119 SDNDKTLDISWSLSNNMLKGGGYL----NAIPPSLSQLPADSSFIERAARFSWFSGGNFG 178
           SD D+TLDISW+LS+N+LKGG YL      +PPSLSQLPADSSFIERAAR S FSGGNFG
Sbjct: 125 SDIDRTLDISWNLSHNILKGGVYLPNIPGMLPPSLSQLPADSSFIERAARLSCFSGGNFG 184

Query: 179 DVTGHFDIPEPMDVFSRGMGVVMPERQEDVPRRNGLGSVSRAGGRFQGNTVNSEASKPVS 238
           D+ GHF+IP+P+ VFSRGMGV+ P+R +++PR NGLG  S  GG+ Q N +NSE SKPV 
Sbjct: 185 DIVGHFNIPDPVGVFSRGMGVI-PDRWDEIPR-NGLGLASVTGGQSQRNVINSETSKPVC 244

Query: 239 LHNA---------AHGSLLKLDDCCKHAVDGSANES---ELSGGDGSGEPCTLEVAGKEV 298
           L N           +GS LKLDD  K AVDGSANES   E SGGDG GEPCTLE  GKE+
Sbjct: 245 LTNEHGATETDSPKNGSPLKLDDRGKLAVDGSANESDEAECSGGDGLGEPCTLEATGKEL 304

Query: 299 SAKGIAAKKRKRSGQKAELDQVNGPLQQTSVAAQDNTESQLKGDQNPSSTANKGTVKHGK 358
           SAKG+  +KRKRSGQ  ELDQ NGPLQQT+V+ +D+ E+  K DQNP+STANKGT KHGK
Sbjct: 305 SAKGLGTRKRKRSGQ-TELDQANGPLQQTTVSPKDDAETHRKRDQNPNSTANKGTGKHGK 364

Query: 359 QASQPLDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 418
           QASQP DPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV
Sbjct: 365 QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 424

The following BLAST results are available for this feature:
BLAST of CmoCh18G010980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH049_ARATH3.2e-5342.23Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1[more]
BH076_ARATH3.6e-3642.65Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=1 SV=1[more]
BH074_ARATH3.0e-2748.09Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=1 SV=1[more]
BH062_ARATH5.7e-2663.96Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1[more]
BH078_ARATH6.3e-2547.56Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1[more]
BLAST of CmoCh18G010980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KR06_CUCSA4.0e-13571.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G607470 PE=4 SV=1[more]
V4ST89_9ROSI2.1e-8855.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031122mg PE=4 SV=1[more]
B9HWS9_POPTR8.2e-8854.57Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0010s14600... [more]
B9RLE7_RICCO1.3e-8554.97Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466300 PE=4 SV=1[more]
A0A067K8S8_JATCU6.5e-8555.35Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11799 PE=4 SV=1[more]
BLAST of CmoCh18G010980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68920.11.8e-5442.23 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G26260.12.0e-3742.65 cryptochrome-interacting basic-helix-loop-helix 5[more]
AT1G10120.11.7e-2848.09 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G07340.13.2e-2763.96 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G48560.13.6e-2647.56 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmoCh18G010980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091316|ref|XP_008446486.1|6.1e-13772.15PREDICTED: transcription factor bHLH49 isoform X1 [Cucumis melo][more]
gi|659091320|ref|XP_008446489.1|6.1e-13772.15PREDICTED: transcription factor bHLH49 isoform X3 [Cucumis melo][more]
gi|449434704|ref|XP_004135136.1|5.7e-13571.62PREDICTED: transcription factor bHLH49 isoform X3 [Cucumis sativus][more]
gi|778705720|ref|XP_011655727.1|5.7e-13571.62PREDICTED: transcription factor bHLH49 isoform X1 [Cucumis sativus][more]
gi|659091318|ref|XP_008446487.1|5.7e-13571.88PREDICTED: transcription factor bHLH49 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G010980.1CmoCh18G010980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 363..420
score: 4.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 365..413
score: 3.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 368..418
score: 7.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 362..412
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 360..427
score: 8.37
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 278..417
score: 3.7E-89coord: 119..189
score: 3.7
NoneNo IPR availablePANTHERPTHR12565:SF159TRANSCRIPTION FACTOR BHLH76coord: 278..417
score: 3.7E-89coord: 119..189
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G010980Cucsa.284270Cucumber (Gy14) v1cgycmoB0789
CmoCh18G010980CmaCh18G010760Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G010980CmaCh04G015700Cucurbita maxima (Rimu)cmacmoB706
CmoCh18G010980Cla020330Watermelon (97103) v1cmowmB365
CmoCh18G010980Csa5G607470Cucumber (Chinese Long) v2cmocuB406
CmoCh18G010980MELO3C012177Melon (DHL92) v3.5.1cmomeB344
CmoCh18G010980ClCG05G023410Watermelon (Charleston Gray)cmowcgB358
CmoCh18G010980CSPI05G24580Wild cucumber (PI 183967)cmocpiB411
CmoCh18G010980Lsi04G003280Bottle gourd (USVL1VR-Ls)cmolsiB364
CmoCh18G010980Cp4.1LG09g02530Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G010980Cp4.1LG01g13230Cucurbita pepo (Zucchini)cmocpeB392
CmoCh18G010980MELO3C012177.2Melon (DHL92) v3.6.1cmomedB395
CmoCh18G010980CsaV3_5G033600Cucumber (Chinese Long) v3cmocucB0487
CmoCh18G010980Cla97C05G105370Watermelon (97103) v2cmowmbB403
CmoCh18G010980Bhi07G001177Wax gourdcmowgoB0535
CmoCh18G010980CsGy5G024070Cucumber (Gy14) v2cgybcmoB603
CmoCh18G010980Carg21530Silver-seed gourdcarcmoB1395
CmoCh18G010980Carg01779Silver-seed gourdcarcmoB1135
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh18G010980CmoCh04G016410Cucurbita moschata (Rifu)cmocmoB336
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G010980Watermelon (97103) v2cmowmbB411
CmoCh18G010980Wax gourdcmowgoB0503
CmoCh18G010980Cucurbita moschata (Rifu)cmocmoB063
CmoCh18G010980Cucumber (Gy14) v1cgycmoB0265
CmoCh18G010980Cucurbita maxima (Rimu)cmacmoB088
CmoCh18G010980Cucurbita maxima (Rimu)cmacmoB137
CmoCh18G010980Wild cucumber (PI 183967)cmocpiB391
CmoCh18G010980Melon (DHL92) v3.5.1cmomeB361
CmoCh18G010980Watermelon (Charleston Gray)cmowcgB364
CmoCh18G010980Watermelon (97103) v1cmowmB396
CmoCh18G010980Cucurbita pepo (Zucchini)cmocpeB390
CmoCh18G010980Cucurbita pepo (Zucchini)cmocpeB411
CmoCh18G010980Bottle gourd (USVL1VR-Ls)cmolsiB374
CmoCh18G010980Bottle gourd (USVL1VR-Ls)cmolsiB363
CmoCh18G010980Melon (DHL92) v3.6.1cmomedB412
CmoCh18G010980Silver-seed gourdcarcmoB0627
CmoCh18G010980Silver-seed gourdcarcmoB0811
CmoCh18G010980Cucumber (Chinese Long) v3cmocucB0466
CmoCh18G010980Cucumber (Chinese Long) v3cmocucB0493