CmoCh18G008690 (gene) Cucurbita moschata (Rifu)

NameCmoCh18G008690
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(S-ribonuclease) (S7-RNase)
LocationCmo_Chr18 : 10003887 .. 10005121 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCTTTTTATTTTTCTCCCTTCTTCTCCATGCTCTCCATATATATAATGCCATTCCAATTTGTGTATACCATCACTTAACTTCTCTTTATGGCTCATATTCATCTCATCCTCCTCTCCACTCTCATCTTCTCTGTGAATGCCCAATTTGAATTGTTTCAAATGGTGCAACAGTGGCCTCCGGCCACATGTACAAATGTCCTGTGTGCTCGATCACCATCTCCAACCAGGTTCACCATCCATGGCCTATGGCCGGCTAACTACACCAAGCGCTACCTTGTTTGCCGCCAAAGAACAAAATTTTCTGAAACCATTCAGGTACCTTCCATATACAAAATGACTCCTACAAATGCATCACATTCTAACTGGTTTTTTTTTGTTCAGGGATTTGCTGCACTCGAACCACTTCTGACTTATCATTGGCCAAACTTGAAGAGAGGGAAGGACAAAACTTTTTGGAGAAAGGAATGGAATAAACATGGACCATGTTCGGAGAATGTTTTTAACCAAGTTCAATATTTTCAAACAGCTTTGAACATTCGCACAAACCCCAGATACGACCTACTGGCTATTTTGAACGCCGCCAAACTCGGTCCGACCGGCAACACATCCCGCCAATATCAAGTCATCAAAAATGCCATTCAAGCCGCAACCGGGAAGAAGCCAGGGCTTCGTTGCAACGTCAATAAAAACACTAAACAGACCCAATTGCATGAAATCGTATTATGCTTCCATAAGGATGGTGCAACCCTTATTGATTGTCCTTTTGCCGACTGCCCACCACGGTTTGCTTTTTACCTAAGCACTTCATTCTGAGATGTGTAAGACTTCTATGAAAAAAAATAAATAAATTACTTTAATCGTAAATTTCTTTATGTTAAGAAAATTAAATAATTAAATTATTTCAACTATTAAAGTGCACCATTCATTTTAATTGATAAAAGTATTTCTAAAAAATGCAAAAATATAAATATACTTTTCTCCTATTTAAAACGTGTTAAACACTAATAAACATCATACTTTCGATCCCAATTCTATTTCTCATTCTTGACATGGTATCAGAGCACCGATCTTGGTGTTCTTAAATATCAAAATTTCCTTTATGGCGGAATCAACCAAATCCAGCTTCAAAATTTCAGATGTTGATTTAACACATCCTTATTATATTCATCACTCCGATCAGCCGGGATATTCACTCGTTCCAATCAAATTAAATGGAGCAAATTACCAATCTTG

mRNA sequence

TATCTTTTTATTTTTCTCCCTTCTTCTCCATGCTCTCCATATATATAATGCCATTCCAATTTGTGTATACCATCACTTAACTTCTCTTTATGGCTCATATTCATCTCATCCTCCTCTCCACTCTCATCTTCTCTGTGAATGCCCAATTTGAATTGTTTCAAATGGTGCAACAGTGGCCTCCGGCCACATGTACAAATGTCCTGTGTGCTCGATCACCATCTCCAACCAGGTTCACCATCCATGGCCTATGGCCGGCTAACTACACCAAGCGCTACCTTGTTTGCCGCCAAAGAACAAAATTTTCTGAAACCATTCAGGGATTTGCTGCACTCGAACCACTTCTGACTTATCATTGGCCAAACTTGAAGAGAGGGAAGGACAAAACTTTTTGGAGAAAGGAATGGAATAAACATGGACCATGTTCGGAGAATGTTTTTAACCAAGTTCAATATTTTCAAACAGCTTTGAACATTCGCACAAACCCCAGATACGACCTACTGGCTATTTTGAACGCCGCCAAACTCGGTCCGACCGGCAACACATCCCGCCAATATCAAGTCATCAAAAATGCCATTCAAGCCGCAACCGGGAAGAAGCCAGGGCTTCGTTGCAACGTCAATAAAAACACTAAACAGACCCAATTGCATGAAATCGTATTATGCTTCCATAAGGATGGTGCAACCCTTATTGATTGTCCTTTTGCCGACTGCCCACCACGGTTTGCTTTTTACCTAAGCACTTCATTCTGAGATGTGTAAGACTTCTATGAAAAAAAATAAATAAATTACTTTAATCGTAAATTTCTTTATGTTAAGAAAATTAAATAATTAAATTATTTCAACTATTAAAGTGCACCATTCATTTTAATTGATAAAAGTATTTCTAAAAAATGCAAAAATATAAATATACTTTTCTCCTATTTAAAACGTGTTAAACACTAATAAACATCATACTTTCGATCCCAATTCTATTTCTCATTCTTGACATGGTATCAGAGCACCGATCTTGGTGTTCTTAAATATCAAAATTTCCTTTATGGCGGAATCAACCAAATCCAGCTTCAAAATTTCAGATGTTGATTTAACACATCCTTATTATATTCATCACTCCGATCAGCCGGGATATTCACTCGTTCCAATCAAATTAAATGGAGCAAATTACCAATCTTG

Coding sequence (CDS)

ATGGCTCATATTCATCTCATCCTCCTCTCCACTCTCATCTTCTCTGTGAATGCCCAATTTGAATTGTTTCAAATGGTGCAACAGTGGCCTCCGGCCACATGTACAAATGTCCTGTGTGCTCGATCACCATCTCCAACCAGGTTCACCATCCATGGCCTATGGCCGGCTAACTACACCAAGCGCTACCTTGTTTGCCGCCAAAGAACAAAATTTTCTGAAACCATTCAGGGATTTGCTGCACTCGAACCACTTCTGACTTATCATTGGCCAAACTTGAAGAGAGGGAAGGACAAAACTTTTTGGAGAAAGGAATGGAATAAACATGGACCATGTTCGGAGAATGTTTTTAACCAAGTTCAATATTTTCAAACAGCTTTGAACATTCGCACAAACCCCAGATACGACCTACTGGCTATTTTGAACGCCGCCAAACTCGGTCCGACCGGCAACACATCCCGCCAATATCAAGTCATCAAAAATGCCATTCAAGCCGCAACCGGGAAGAAGCCAGGGCTTCGTTGCAACGTCAATAAAAACACTAAACAGACCCAATTGCATGAAATCGTATTATGCTTCCATAAGGATGGTGCAACCCTTATTGATTGTCCTTTTGCCGACTGCCCACCACGGTTTGCTTTTTACCTAAGCACTTCATTCTGA
BLAST of CmoCh18G008690 vs. Swiss-Prot
Match: RNMC_MOMCH (Ribonuclease MC OS=Momordica charantia PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.2e-37
Identity = 81/196 (41.33%), Postives = 105/196 (53.57%), Query Frame = 1

Query: 20  FELFQMVQQWPPATCTNVLCARSPSP--TRFTIHGLWPANYTKRYLVCRQRTKFSETIQG 79
           F+ F  VQQWPPA C+       P      FTIHGLWP         C Q + F   I  
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFD--ITK 60

Query: 80  FAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYFQTALNIRTNPRYDLL 139
            + L+  L   WPN+ R  ++ FW  EW KHG CSE+ FNQ  YF+ A+++R N  YD++
Sbjct: 61  ISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNN--YDII 120

Query: 140 AILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNKNTKQTQLHEIVLCFHKDGA 199
             L     GP G T +  Q IK  ++A  GK PGLRC  +  TK + L ++V CF +DG+
Sbjct: 121 GALRPHAAGPNGRT-KSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 180

Query: 200 TLIDCPFADCPPRFAF 214
           TLIDC    C   F F
Sbjct: 181 TLIDCTRDTCGANFIF 191

BLAST of CmoCh18G008690 vs. Swiss-Prot
Match: RNS6_PYRPY (Ribonuclease S-6 OS=Pyrus pyrifolia PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.1e-24
Identity = 67/190 (35.26%), Postives = 101/190 (53.16%), Query Frame = 1

Query: 20  FELFQMVQQWPPATC-TNVLCARSPSPTRFTIHGLWPAN-YTKRYLVCRQRTKFSETIQG 79
           +  FQ  QQ+ PA C +N    + P    FT+HGLWP+N      + C+ +T  S+ I  
Sbjct: 28  YNYFQFTQQYQPAVCNSNPTPCKDPPDKLFTVHGLWPSNDVGDDPIYCKNKTIKSQQIGN 87

Query: 80  FAALEPLLTYHWPN-LKRGKDKTFWRKEWNKHGPCSE--NVFNQVQYFQTALNIRTNPRY 139
             A    L   WPN L R     FW ++WNKHG C +   + +++ YF+T + +    + 
Sbjct: 88  LTA---QLIIIWPNVLDRTDHVGFWNRQWNKHGSCGKAPTIKDEMHYFKTVIKMYITQKQ 147

Query: 140 DLLAILNAAKLGPTGNTSRQYQVIKNAIQAAT-GKKPGLRCNVNKNTKQTQLHEIVLCFH 199
           ++  IL+ AK+ P G   R+  +I NAI+  T  KKP L+C   KN + T+L EI +C  
Sbjct: 148 NVSEILSRAKIEPEGKIRRRDDII-NAIRLGTKDKKPKLKC--QKNNQTTELVEITICSD 207

Query: 200 KDGATLIDCP 204
           ++    IDCP
Sbjct: 208 RNLTQFIDCP 211

BLAST of CmoCh18G008690 vs. Swiss-Prot
Match: RNS4_ANTHI (Ribonuclease S-4 OS=Antirrhinum hispanicum GN=S4 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-23
Identity = 67/207 (32.37%), Postives = 104/207 (50.24%), Query Frame = 1

Query: 15  SVNAQFELFQMVQQWPPATC--TNVLCARSPSPTRFTIHGLWPANYTK---RYLVCRQRT 74
           ++ A+ +  ++V QWP + C   +  C R+P P+ FTIHGLWP NYT+   +        
Sbjct: 28  TIIAKCDYLKLVLQWPKSFCLINSRKCQRNPLPSNFTIHGLWPDNYTRQAPQSCTTNNFQ 87

Query: 75  KFSETIQGFAALEPLLTYHWPNLKR----GKDKTFWRKEWNKHGPCSENVFNQVQYFQTA 134
           +F++T      +E  +   WP+LK+    G    FW+ +W KHG C         YF  A
Sbjct: 88  RFTDT-----DIEQRMEESWPDLKQQSIAGLSYNFWQDQWRKHGSCCFPPHESEIYFLKA 147

Query: 135 LNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIK--NAIQAATGKKPGLRCNVNKNTKQT 194
           L ++   R D+L IL      P   T + + V++  N I  A GK P L+C       Q+
Sbjct: 148 LELK--DRLDVLTILENNNFNP--GTPQPFSVLRVFNTISRAIGKTPILKC------AQS 207

Query: 195 QLHEIVLCFHKDGATLIDCPFADCPPR 211
            L E+V+C   +GA+++ CP +   PR
Sbjct: 208 YLKEVVICVDNNGASVVHCPRSRPRPR 219

BLAST of CmoCh18G008690 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-23
Identity = 73/212 (34.43%), Postives = 110/212 (51.89%), Query Frame = 1

Query: 4   IHLILLSTLIFSVNAQ---FELFQMVQQWPPATC-TNVLCA--RSPSPTR-FTIHGLWPA 63
           I L+++   +FS ++    F+ F  VQQWP + C T   C    S  P   F IHGLWP 
Sbjct: 11  ISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPN 70

Query: 64  NYTKRYLVCRQRTKFSETIQGFAALEPLLTY---HWPNLK--RGKDKTFWRKEWNKHGPC 123
                Y      +K  ++    + +  LLT     WP L    G  + FW  EW KHG C
Sbjct: 71  YKDGTYPSNCDASKPFDS----STISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTC 130

Query: 124 SENVFNQVQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPG 183
           SE+V +Q +YFQTALN++   + +LL  L  A + P G  S   + I+++I+ + G  P 
Sbjct: 131 SESVIDQHEYFQTALNLK--QKTNLLGALTKAGINPDGK-SYSLESIRDSIKESIGFTPW 190

Query: 184 LRCNVNKNTKQTQLHEIVLCFHKDGATLIDCP 204
           + CN    +  +QL+++ LC  + G+ LI+CP
Sbjct: 191 VECN-RDGSGNSQLYQVYLCVDRSGSGLIECP 214

BLAST of CmoCh18G008690 vs. Swiss-Prot
Match: RNS5_PYRPY (Ribonuclease S-5 OS=Pyrus pyrifolia PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-23
Identity = 75/209 (35.89%), Postives = 105/209 (50.24%), Query Frame = 1

Query: 7   ILLSTLIFSVNAQFELFQMVQQWPPATC-TNVLCARSPSPTRFTIHGLWPA--------N 66
           +L+  ++ S    ++ FQ  QQ+  A C +N    + P    FT+HGLWP+        N
Sbjct: 15  LLIVLILSSSTVGYDYFQFTQQYQLAVCNSNRTPCKDPPDKLFTVHGLWPSSMAGPDPSN 74

Query: 67  YTKRYLVCRQRTKFSETIQGFAALEPLLTYHWPNL-KRGKDKTFWRKEWNKHGPCS-ENV 126
              R +  R+R K          LEP L   WPN+  R K+K FW KEW KHG C    +
Sbjct: 75  CPIRNI--RKREKL---------LEPQLAIIWPNVFDRTKNKLFWDKEWMKHGTCGYPTI 134

Query: 127 FNQVQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQ-AATGKKPGLRC 186
            N+  YF+T + +  + + ++  IL+ AK+ P G   R    I+NAI+  A  KKP L+C
Sbjct: 135 DNENHYFETVIKMYISKKQNVSRILSKAKIEPDGK-KRALLDIENAIRNGADNKKPKLKC 194

Query: 187 NVNKNTKQTQLHEIVLCFHKDGATLIDCP 204
              K    T+L EI LC  K G   IDCP
Sbjct: 195 --QKKGTTTELVEITLCSDKSGEHFIDCP 209

BLAST of CmoCh18G008690 vs. TrEMBL
Match: A0A0A0LAN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40
Identity = 92/205 (44.88%), Postives = 123/205 (60.00%), Query Frame = 1

Query: 4   IHLILLSTLIFSVNA--QFELFQMVQQWPPATCTN---VLCARSPSPTRFTIHGLWPANY 63
           I +I   +L+  VN    FE FQ V+QW P  C     V    +P   +FTIHGLWP+N+
Sbjct: 5   ILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSNH 64

Query: 64  TKRYLVCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQ 123
           +  +L+C+ +T +S+ I    +LE  L   WP+LK G +  FW  EW+ HG CS+  F+ 
Sbjct: 65  SNAHLLCQSKTIYSKVI----SLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 124

Query: 124 VQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNK 183
            QYFQ +LN+    ++DLL IL AA L P  + +   Q I   IQ  T K PG+RCN N 
Sbjct: 125 FQYFQISLNLLR--KFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNV 184

Query: 184 NTKQTQLHEIVLCFHKDGATLIDCP 204
            T ++QL+EIVLC  KDGATLIDCP
Sbjct: 185 KTGKSQLNEIVLCLEKDGATLIDCP 203

BLAST of CmoCh18G008690 vs. TrEMBL
Match: A0A0A0LDS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743990 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.9e-39
Identity = 93/207 (44.93%), Postives = 125/207 (60.39%), Query Frame = 1

Query: 6   LILLSTLIFSVNAQFELFQMVQQWPPATCTN--VLCARSPSPTRFTIHGLWPANYTKRYL 65
           L+LL   ++ V+ Q++ FQMVQQW PA C++  V C  +P P  FTIHGLWP+N+T   L
Sbjct: 9   LVLLG--LWCVDGQYQFFQMVQQWGPAKCSSGRVKCHVTPKPM-FTIHGLWPSNFTDLML 68

Query: 66  -VCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYF 125
             C  ++  +  I+    L+  L+ +WP++ +GKD  FW+ EW KHG CS   FN  QYF
Sbjct: 69  HYCSLQSFDASQIK---TLQSELSKYWPDVVKGKDVDFWKHEWEKHGTCSNPPFNIFQYF 128

Query: 126 QTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCN-VNKNTK 185
           + ALNIR   +YDL+AILN A L P+ +   QY  I + IQAA   KP L+CN  N   +
Sbjct: 129 ELALNIRKYKKYDLMAILNNAGLHPSTSKLHQYDDIADLIQAAVEAKPLLKCNDKNGQGQ 188

Query: 186 QTQLHEIVLCFHKDGATLIDCPFADCP 209
             QL E++LCF   G   IDCP    P
Sbjct: 189 NNQLWEVILCFDHGGVNPIDCPAQPVP 209

BLAST of CmoCh18G008690 vs. TrEMBL
Match: A0A0A0LAB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 8.7e-38
Identity = 89/200 (44.50%), Postives = 114/200 (57.00%), Query Frame = 1

Query: 6   LILLSTLIFSVNAQFELFQMVQQWPPATCTNV--LCARSPSPTRFTIHGLWPANYTKRYL 65
           L LLS+L+F     F+ FQ+VQQW P  C+     C   P P  FTIHGLWP+N++   +
Sbjct: 8   LCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQPQPM-FTIHGLWPSNFSTVPI 67

Query: 66  VCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYFQ 125
           +C  RTK         +LE  L  +WP++  GK+  FW  EW KH  C +  F    YF 
Sbjct: 68  LC-PRTKKLFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFTIFWYFD 127

Query: 126 TALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNKNTKQT 185
            +L  R N  YDLL ILN A L    +     Q + + I+ ATG +PG+RCN+N  TK+ 
Sbjct: 128 ISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNINGITKKL 187

Query: 186 QLHEIVLCFHKDGATLIDCP 204
           QL EIVLCF  DG TLIDCP
Sbjct: 188 QLKEIVLCFGNDGTTLIDCP 205

BLAST of CmoCh18G008690 vs. TrEMBL
Match: A7ISK5_PRUDU (Sa-RNase OS=Prunus dulcis GN=S PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32
Identity = 83/205 (40.49%), Postives = 114/205 (55.61%), Query Frame = 1

Query: 12  LIFSVNAQFELFQMVQQWPPATC--TNVLCARSPSPTRFTIHGLWPANYTKRYLVCR-QR 71
           L F+++  ++ FQ VQQWPP TC  +   C ++P P+ FTIHGLWP+NY+K+  V    R
Sbjct: 19  LCFTMSTSYQYFQFVQQWPPTTCAVSKQPCYQNP-PSIFTIHGLWPSNYSKKAWVANCTR 78

Query: 72  TKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYFQTALNI 131
           T+F+ ++     LE  L   WPN++      FW +EWNKHG CSE   +Q +YFQ + +I
Sbjct: 79  TRFNNSLA--PKLEAKLKISWPNVENANYTEFWEREWNKHGTCSEQTLDQEEYFQRSHDI 138

Query: 132 RTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVN----KNTKQTQ 191
                Y++  IL  A + P G     Y  I + I+  T K P LRC  +    KN K + 
Sbjct: 139 WN--AYNITNILKKANILPNG-AIWNYSDIVSPIKTVTRKMPALRCKPDPTKPKNHKISH 198

Query: 192 --LHEIVLCFHKDGATLIDCPFADC 208
             LHE+VLC H  G  LIDC    C
Sbjct: 199 QLLHEVVLCLHYKGRALIDCNRTAC 217

BLAST of CmoCh18G008690 vs. TrEMBL
Match: G3C8T8_9ROSA (S-locus associated ribonuclease OS=Prunus speciosa GN=S-RNase PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-32
Identity = 86/216 (39.81%), Postives = 116/216 (53.70%), Query Frame = 1

Query: 2   AHIHLILLSTLIFSVNA-QFELFQMVQQWPPATC--TNVLCARSPSPTRFTIHGLWPANY 61
           A + L L+    FS +   ++ FQ VQQWPP TC  +   C ++P P+ FTIHGLWP+NY
Sbjct: 9   AFLVLALVLFWCFSTSTGSYQYFQFVQQWPPTTCAISKKPCYQNP-PSIFTIHGLWPSNY 68

Query: 62  TKRYLVCR-QRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFN 121
           +K   V     T+F+ ++     LE  L   WP+++ G    FW +EWNKHG CSE   +
Sbjct: 69  SKNAWVANCSPTRFNNSLS--PRLETKLKISWPDVESGNYTDFWEREWNKHGTCSEQTLD 128

Query: 122 QVQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCN-- 181
           Q QYF+ + +I     Y++  IL  AK+ PTG     Y  I + I+ A  K P LRC   
Sbjct: 129 QEQYFERSHDIWN--AYNITNILKRAKILPTGG-KWDYSDIVSPIKTAIRKMPALRCKPD 188

Query: 182 ----VNKNTKQTQLHEIVLCFHKDGATLIDCPFADC 208
                N N     LHE+VLC H +G  LIDC    C
Sbjct: 189 PTLPKNHNISHQLLHEVVLCLHYNGRALIDCNNPSC 218

BLAST of CmoCh18G008690 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24
Identity = 73/212 (34.43%), Postives = 110/212 (51.89%), Query Frame = 1

Query: 4   IHLILLSTLIFSVNAQ---FELFQMVQQWPPATC-TNVLCA--RSPSPTR-FTIHGLWPA 63
           I L+++   +FS ++    F+ F  VQQWP + C T   C    S  P   F IHGLWP 
Sbjct: 11  ISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPN 70

Query: 64  NYTKRYLVCRQRTKFSETIQGFAALEPLLTY---HWPNLK--RGKDKTFWRKEWNKHGPC 123
                Y      +K  ++    + +  LLT     WP L    G  + FW  EW KHG C
Sbjct: 71  YKDGTYPSNCDASKPFDS----STISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTC 130

Query: 124 SENVFNQVQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPG 183
           SE+V +Q +YFQTALN++   + +LL  L  A + P G  S   + I+++I+ + G  P 
Sbjct: 131 SESVIDQHEYFQTALNLK--QKTNLLGALTKAGINPDGK-SYSLESIRDSIKESIGFTPW 190

Query: 184 LRCNVNKNTKQTQLHEIVLCFHKDGATLIDCP 204
           + CN    +  +QL+++ LC  + G+ LI+CP
Sbjct: 191 VECN-RDGSGNSQLYQVYLCVDRSGSGLIECP 214

BLAST of CmoCh18G008690 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 71/224 (31.70%), Postives = 102/224 (45.54%), Query Frame = 1

Query: 7   ILLSTLIFS------VNAQFELFQMVQQWPPATCTNVLCARSPSPTR----FTIHGLWPA 66
           +LL  L+F           F+ F  V QWP A C        P+  +    F IHGLWP 
Sbjct: 9   VLLKLLVFQGLFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWP- 68

Query: 67  NYTKRYLV--CRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDK--TFWRKEWNKHGPCS 126
           NY        C   ++F  +    + L   L  +WP L    ++   FW  EW KHG CS
Sbjct: 69  NYNGGSWPSNCDPDSQFDRS--QISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCS 128

Query: 127 ENVFNQVQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGL 186
           E+V +Q +YF+ AL ++   + +LL IL  + + P  +       I NAI+   G  PG+
Sbjct: 129 ESVMDQHEYFENALKLK--QKANLLQILKNSGINP-DDGFYNLDKITNAIKDGIGFTPGI 188

Query: 187 RCNVNKNTKQTQLHEIVLCFHKDGATLIDCPF---ADCPPRFAF 214
            CN +   +  QLH+I +C    G   I+CP      CP +  F
Sbjct: 189 ECNKDPE-RNAQLHQIYICVDTSGTEFIECPVLPRGSCPSQIQF 225

BLAST of CmoCh18G008690 vs. TAIR10
Match: AT2G39780.1 (AT2G39780.1 ribonuclease 2)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-19
Identity = 64/195 (32.82%), Postives = 92/195 (47.18%), Query Frame = 1

Query: 19  QFELFQMVQQWPPATCT--------NVLCARSPSPTRFTIHGLWPANYTKRYLVCRQRTK 78
           +F+ F +  QWP   C         N  C  S +PT+FTIHGLWP      +  C  R+ 
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSD 90

Query: 79  FSETIQGFAALEPLLTYHWPNLKRGKDK-------TFWRKEWNKHGPCSENVF-NQVQYF 138
           F E  +  + L   L  +WP+L  G          +FW  EW KHG CS  VF ++  YF
Sbjct: 91  FKE--KEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF 150

Query: 139 QTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQV--IKNAIQAATGKKPGLRCNVNKNT 196
            T LN+    ++++  +L  A  G   + S +Y +  I  AIQ A    P + C      
Sbjct: 151 LTTLNLYL--KHNVTDVLYQA--GYVASNSEKYPLGGIVTAIQNAFHITPEVVC------ 210

BLAST of CmoCh18G008690 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 87.8 bits (216), Expect = 9.0e-18
Identity = 61/205 (29.76%), Postives = 92/205 (44.88%), Query Frame = 1

Query: 6   LILLSTLIFSVNAQFELFQMVQQWPPATCTNVLCARSPSPTR----FTIHGLWPANYTKR 65
           L L    + S    F+ F  V QWP A C +      P   +    F IHGLWP   T  
Sbjct: 8   LALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYKTGG 67

Query: 66  YLV-CRQRTKFSETIQGFAALEPLLTYHWPNLK--RGKDKTFWRKEWNKHGPCSENVFNQ 125
           +   C   ++F +     + L   L   WP L         FW  EW KHG C+E+  +Q
Sbjct: 68  WPQNCNPDSRFDDL--RVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQ 127

Query: 126 VQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNK 185
             YF+  L ++   + +LL  L  A + P  +   + + I+N I+   G  PG+ CN   
Sbjct: 128 HDYFEAGLKLK--QKANLLHALTNAGIKP-DDKFYEMKDIENTIKQVVGFAPGIECN-KD 187

Query: 186 NTKQTQLHEIVLCFHKDGATLIDCP 204
           ++  +QL++I LC     +  I+CP
Sbjct: 188 SSHNSQLYQIYLCVDTSASKFINCP 206

BLAST of CmoCh18G008690 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 85.5 bits (210), Expect = 4.4e-17
Identity = 62/213 (29.11%), Postives = 92/213 (43.19%), Query Frame = 1

Query: 4   IHLILLSTLIFS---VNAQFELFQMVQQWPPATCTNVLCARSPSP----TRFTIHGLWPA 63
           + L++L +L+ S       F  F  V  WP A C +      P+     + F IHGLWP 
Sbjct: 7   VSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGLWPQ 66

Query: 64  -NYTKRYLVCRQRTKFSETIQGFAALEPLLTYHWPNLK----RGKDKTFWRKEWNKHGPC 123
            N       C Q   F   I   + L   +   W           +   W  EWNKHG C
Sbjct: 67  FNNGTWPAFCDQTNLFD--ISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGTC 126

Query: 124 SENVFNQVQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPG 183
            +++F+Q  YF+T  N++   +  LL IL    + P  +       IKNAI+ A G  PG
Sbjct: 127 VQSIFDQHSYFRT--NLKFKHKVHLLNILIQKGIKP-NDGFYSLDEIKNAIKCAIGFAPG 186

Query: 184 LRCNVNKNTKQTQLHEIVLCFHKDGATLIDCPF 205
           + CN +    + QL +I +C        ++CP+
Sbjct: 187 IECNEDVKGNK-QLFQIYICLDNYAKEFVECPY 213

BLAST of CmoCh18G008690 vs. NCBI nr
Match: gi|700203887|gb|KGN59020.1| (hypothetical protein Csa_3G745530 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 2.7e-40
Identity = 92/205 (44.88%), Postives = 123/205 (60.00%), Query Frame = 1

Query: 4   IHLILLSTLIFSVNA--QFELFQMVQQWPPATCTN---VLCARSPSPTRFTIHGLWPANY 63
           I +I   +L+  VN    FE FQ V+QW P  C     V    +P   +FTIHGLWP+N+
Sbjct: 5   ILIIYFLSLVVFVNGGVPFEFFQFVEQWGPNVCNTGARVSPCHTPPQAKFTIHGLWPSNH 64

Query: 64  TKRYLVCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQ 123
           +  +L+C+ +T +S+ I    +LE  L   WP+LK G +  FW  EW+ HG CS+  F+ 
Sbjct: 65  SNAHLLCQSKTIYSKVI----SLEGQLNISWPDLKYGNNDKFWGHEWDTHGKCSDPPFSL 124

Query: 124 VQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNK 183
            QYFQ +LN+    ++DLL IL AA L P  + +   Q I   IQ  T K PG+RCN N 
Sbjct: 125 FQYFQISLNLLR--KFDLLTILKAAGLNPQTSQNLAIQNIMAPIQRTTKKYPGIRCNKNV 184

Query: 184 NTKQTQLHEIVLCFHKDGATLIDCP 204
            T ++QL+EIVLC  KDGATLIDCP
Sbjct: 185 KTGKSQLNEIVLCLEKDGATLIDCP 203

BLAST of CmoCh18G008690 vs. NCBI nr
Match: gi|700203881|gb|KGN59014.1| (hypothetical protein Csa_3G743990 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 93/207 (44.93%), Postives = 125/207 (60.39%), Query Frame = 1

Query: 6   LILLSTLIFSVNAQFELFQMVQQWPPATCTN--VLCARSPSPTRFTIHGLWPANYTKRYL 65
           L+LL   ++ V+ Q++ FQMVQQW PA C++  V C  +P P  FTIHGLWP+N+T   L
Sbjct: 9   LVLLG--LWCVDGQYQFFQMVQQWGPAKCSSGRVKCHVTPKPM-FTIHGLWPSNFTDLML 68

Query: 66  -VCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYF 125
             C  ++  +  I+    L+  L+ +WP++ +GKD  FW+ EW KHG CS   FN  QYF
Sbjct: 69  HYCSLQSFDASQIK---TLQSELSKYWPDVVKGKDVDFWKHEWEKHGTCSNPPFNIFQYF 128

Query: 126 QTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCN-VNKNTK 185
           + ALNIR   +YDL+AILN A L P+ +   QY  I + IQAA   KP L+CN  N   +
Sbjct: 129 ELALNIRKYKKYDLMAILNNAGLHPSTSKLHQYDDIADLIQAAVEAKPLLKCNDKNGQGQ 188

Query: 186 QTQLHEIVLCFHKDGATLIDCPFADCP 209
             QL E++LCF   G   IDCP    P
Sbjct: 189 NNQLWEVILCFDHGGVNPIDCPAQPVP 209

BLAST of CmoCh18G008690 vs. NCBI nr
Match: gi|778683692|ref|XP_011651927.1| (PREDICTED: ribonuclease MC-like [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 89/200 (44.50%), Postives = 114/200 (57.00%), Query Frame = 1

Query: 6   LILLSTLIFSVNAQFELFQMVQQWPPATCTNV--LCARSPSPTRFTIHGLWPANYTKRYL 65
           L LLS+L+F     F+ FQ+VQQW P  C+     C   P P  FTIHGLWP+N++   +
Sbjct: 8   LCLLSSLLFVNGIPFDFFQLVQQWGPNICSPAGSKCYAQPQPM-FTIHGLWPSNFSTVPI 67

Query: 66  VCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYFQ 125
           +C  RTK         +LE  L  +WP++  GK+  FW  EW KH  C +  F    YF 
Sbjct: 68  LC-PRTKKLFPQGKVTSLEQHLNKYWPDVISGKNSNFWEHEWRKHADCIDPPFTIFWYFD 127

Query: 126 TALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNKNTKQT 185
            +L  R N  YDLL ILN A L    +     Q + + I+ ATG +PG+RCN+N  TK+ 
Sbjct: 128 ISLRHRMNKTYDLLTILNDAGLSHQTHKDLISQNVLDPIKNATGMEPGIRCNINGITKKL 187

Query: 186 QLHEIVLCFHKDGATLIDCP 204
           QL EIVLCF  DG TLIDCP
Sbjct: 188 QLKEIVLCFGNDGTTLIDCP 205

BLAST of CmoCh18G008690 vs. NCBI nr
Match: gi|659085730|ref|XP_008443571.1| (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 89/201 (44.28%), Postives = 112/201 (55.72%), Query Frame = 1

Query: 6   LILLSTLIFSVNAQFELFQMVQQWPPATCTN-VLCARSPSPTRFTIHGLWPANYTKRYLV 65
           L LLS L+F     F+ FQ+V+QW P TC +   C   P P  FTIHGLWP+N++   L 
Sbjct: 8   LCLLSLLLFVNGYPFDFFQLVEQWGPNTCNDGTQCHAQPQP-EFTIHGLWPSNFSNARLF 67

Query: 66  CRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYFQT 125
           C  R  F       + LE  L  +WP++  G ++ FW  EW KHG C +  FN  QYFQ 
Sbjct: 68  CATRKLFDN--GQISLLEGDLDRYWPDVINGNNRGFWSNEWKKHGACIDPPFNITQYFQ- 127

Query: 126 ALNIRTNPRYDLLAILNAA--KLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNKNTKQ 185
            L++  +  YDLL ILN    +     N     + I N I  AT K  G+RCN N  TK+
Sbjct: 128 -LSLDHHRTYDLLKILNGVWHRNRQMPNNGLAPKDILNPIFNATNKTAGIRCNKNGITKK 187

Query: 186 TQLHEIVLCFHKDGATLIDCP 204
            QLHEIVLCF  +G TLIDCP
Sbjct: 188 LQLHEIVLCFDNNGTTLIDCP 203

BLAST of CmoCh18G008690 vs. NCBI nr
Match: gi|133173|sp|P23540.1|RNMC_MOMCH (RecName: Full=Ribonuclease MC; Short=RNase MC)

HSP 1 Score: 155.6 bits (392), Expect = 9.9e-35
Identity = 81/196 (41.33%), Postives = 105/196 (53.57%), Query Frame = 1

Query: 20  FELFQMVQQWPPATCTNVLCARSPSP--TRFTIHGLWPANYTKRYLVCRQRTKFSETIQG 79
           F+ F  VQQWPPA C+       P      FTIHGLWP         C Q + F   I  
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFD--ITK 60

Query: 80  FAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQVQYFQTALNIRTNPRYDLL 139
            + L+  L   WPN+ R  ++ FW  EW KHG CSE+ FNQ  YF+ A+++R N  YD++
Sbjct: 61  ISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNN--YDII 120

Query: 140 AILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNKNTKQTQLHEIVLCFHKDGA 199
             L     GP G T +  Q IK  ++A  GK PGLRC  +  TK + L ++V CF +DG+
Sbjct: 121 GALRPHAAGPNGRT-KSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 180

Query: 200 TLIDCPFADCPPRFAF 214
           TLIDC    C   F F
Sbjct: 181 TLIDCTRDTCGANFIF 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RNMC_MOMCH6.2e-3741.33Ribonuclease MC OS=Momordica charantia PE=1 SV=1[more]
RNS6_PYRPY2.1e-2435.26Ribonuclease S-6 OS=Pyrus pyrifolia PE=1 SV=1[more]
RNS4_ANTHI1.3e-2332.37Ribonuclease S-4 OS=Antirrhinum hispanicum GN=S4 PE=2 SV=1[more]
RNS1_ARATH3.0e-2334.43Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1[more]
RNS5_PYRPY3.0e-2335.89Ribonuclease S-5 OS=Pyrus pyrifolia PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LAN6_CUCSA1.9e-4044.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G745530 PE=3 SV=1[more]
A0A0A0LDS5_CUCSA7.9e-3944.93Uncharacterized protein OS=Cucumis sativus GN=Csa_3G743990 PE=3 SV=1[more]
A0A0A0LAB0_CUCSA8.7e-3844.50Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736680 PE=3 SV=1[more]
A7ISK5_PRUDU2.5e-3240.49Sa-RNase OS=Prunus dulcis GN=S PE=3 SV=1[more]
G3C8T8_9ROSA5.5e-3239.81S-locus associated ribonuclease OS=Prunus speciosa GN=S-RNase PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G02990.11.7e-2434.43 ribonuclease 1[more]
AT1G14220.13.5e-2231.70 Ribonuclease T2 family protein[more]
AT2G39780.13.6e-1932.82 ribonuclease 2[more]
AT1G26820.19.0e-1829.76 ribonuclease 3[more]
AT1G14210.14.4e-1729.11 Ribonuclease T2 family protein[more]
Match NameE-valueIdentityDescription
gi|700203887|gb|KGN59020.1|2.7e-4044.88hypothetical protein Csa_3G745530 [Cucumis sativus][more]
gi|700203881|gb|KGN59014.1|1.1e-3844.93hypothetical protein Csa_3G743990 [Cucumis sativus][more]
gi|778683692|ref|XP_011651927.1|1.3e-3744.50PREDICTED: ribonuclease MC-like [Cucumis sativus][more]
gi|659085730|ref|XP_008443571.1|1.2e-3544.28PREDICTED: ribonuclease MC-like [Cucumis melo][more]
gi|133173|sp|P23540.1|RNMC_MOMCH9.9e-3541.33RecName: Full=Ribonuclease MC; Short=RNase MC[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001568RNase_T2-like
IPR018188RNase_T2_His_AS_1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0033897ribonuclease T2 activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G008690.1CmoCh18G008690.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001568Ribonuclease T2-likeGENE3DG3DSA:3.90.730.10coord: 21..214
score: 2.0
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 1..203
score: 9.5
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 23..202
score: 1.5
IPR001568Ribonuclease T2-likeunknownSSF55895Ribonuclease Rh-likecoord: 14..205
score: 1.96
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 48..55
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None