CmoCh18G007710 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAAGCAACTCCAAATCTTCTTCTTAGGTCTCTTTTCTACACATTCTTAGTCTCTCCTTTTCAATCCAAATTCGACTGATAACTTTGGCTTCAAATCCAAGAAGCGAAGAGAAGAAATGGTTGGAGCCTCCCACAGCGCCGGCGGTATCGCCGCCAGATCTGATAGAACTGCAACGATTAAATTTCTATGCAGTTATGGCGGCAAGATCCTTCCTCGTTATCCGGATGGCAAACTTCGTTATCTTGGCGGTGAAACTCGTGTTTTCGCTGTTGATCGCTCCATTACTTTCTCTGGTTAGTATTGGTCTCTTTTCTGACTTTATGTTTCATTATCTGTTGATTAGTATCGCGAATGTTGTGATTGAGTTTTGTGATTTGTTGATTTCGGAGTTCGTTGTGTAATTTAAGCCTTGGTTTGAACTTCTTGAGAGTAAGATTTATGATTGTGTCTGGTTACAGAACTATTGTTGAAGCTGGGACAGTTGTGTGGAACATGTGTGAGTCTTCGTTGTCAATTGCCTTCAGAGGATCTGGATGCTTTGGTATCGATAACCTCCGATGAGGACCTAGCGAATCTCATTGAGGAATACGATCGAGCAGCATCGCCGCCGTCTTCTTTGAAGATCAGAGCGTTCCTTTCACAGCCTAAATCTGTGAAAAAAAGTCCTCTCTCTTGTTCCTCGGCCTCTTCATCATCGTCGTCGTCCTCAAAATCTTCGTCTCCGACAACTGCTGCGTCCTCTCCAAGGATCCCGACGCCGGTTCCTGATCATTGCTTCCACCAGATCCCGACGCCAGTGAGGTTTTCGTACCGTCTCAAGAACTCTCCGTCCAAGGTTCCTCACTGCTCATATTATCCTCAAGGGAAGCCTAGCCATGTCTACCTTATCCACAATGGAAATCACTGGCAATAA GGAGAAGCAACTCCAAATCTTCTTCTTAGGTCTCTTTTCTACACATTCTTAGTCTCTCCTTTTCAATCCAAATTCGACTGATAACTTTGGCTTCAAATCCAAGAAGCGAAGAGAAGAAATGGTTGGAGCCTCCCACAGCGCCGGCGGTATCGCCGCCAGATCTGATAGAACTGCAACGATTAAATTTCTATGCAGTTATGGCGGCAAGATCCTTCCTCGTTATCCGGATGGCAAACTTCGTTATCTTGGCGGTGAAACTCGTGTTTTCGCTGTTGATCGCTCCATTACTTTCTCTGAACTATTGTTGAAGCTGGGACAGTTGTGTGGAACATGTGTGAGTCTTCGTTGTCAATTGCCTTCAGAGGATCTGGATGCTTTGGTATCGATAACCTCCGATGAGGACCTAGCGAATCTCATTGAGGAATACGATCGAGCAGCATCGCCGCCGTCTTCTTTGAAGATCAGAGCGTTCCTTTCACAGCCTAAATCTGTGAAAAAAAGTCCTCTCTCTTGTTCCTCGGCCTCTTCATCATCGTCGTCGTCCTCAAAATCTTCGTCTCCGACAACTGCTGCGTCCTCTCCAAGGATCCCGACGCCGGTTCCTGATCATTGCTTCCACCAGATCCCGACGCCAGTGAGGTTTTCGTACCGTCTCAAGAACTCTCCGTCCAAGGTTCCTCACTGCTCATATTATCCTCAAGGGAAGCCTAGCCATGTCTACCTTATCCACAATGGAAATCACTGGCAATAA ATGGTTGGAGCCTCCCACAGCGCCGGCGGTATCGCCGCCAGATCTGATAGAACTGCAACGATTAAATTTCTATGCAGTTATGGCGGCAAGATCCTTCCTCGTTATCCGGATGGCAAACTTCGTTATCTTGGCGGTGAAACTCGTGTTTTCGCTGTTGATCGCTCCATTACTTTCTCTGAACTATTGTTGAAGCTGGGACAGTTGTGTGGAACATGTGTGAGTCTTCGTTGTCAATTGCCTTCAGAGGATCTGGATGCTTTGGTATCGATAACCTCCGATGAGGACCTAGCGAATCTCATTGAGGAATACGATCGAGCAGCATCGCCGCCGTCTTCTTTGAAGATCAGAGCGTTCCTTTCACAGCCTAAATCTGTGAAAAAAAGTCCTCTCTCTTGTTCCTCGGCCTCTTCATCATCGTCGTCGTCCTCAAAATCTTCGTCTCCGACAACTGCTGCGTCCTCTCCAAGGATCCCGACGCCGGTTCCTGATCATTGCTTCCACCAGATCCCGACGCCAGTGAGGTTTTCGTACCGTCTCAAGAACTCTCCGTCCAAGGTTCCTCACTGCTCATATTATCCTCAAGGGAAGCCTAGCCATGTCTACCTTATCCACAATGGAAATCACTGGCAATAA
BLAST of CmoCh18G007710 vs. TrEMBL
Match: A0A0A0KQ32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598630 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.8e-94 Identity = 185/210 (88.10%), Postives = 192/210 (91.43%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TrEMBL
Match: A5B808_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004539 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 4.3e-58 Identity = 131/191 (68.59%), Postives = 144/191 (75.39%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TrEMBL
Match: F6GZ12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0291g00050 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 7.3e-58 Identity = 131/191 (68.59%), Postives = 144/191 (75.39%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TrEMBL
Match: A0A061E7N2_THECC (Octicosapeptide/Phox/Bem1p family protein isoform 1 OS=Theobroma cacao GN=TCM_010524 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.5e-58 Identity = 133/194 (68.56%), Postives = 148/194 (76.29%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TrEMBL
Match: W9S1K0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027716 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57 Identity = 129/194 (66.49%), Postives = 145/194 (74.74%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TAIR10
Match: AT1G70640.1 (AT1G70640.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein) HSP 1 Score: 141.0 bits (354), Expect = 8.5e-34 Identity = 84/146 (57.53%), Postives = 106/146 (72.60%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TAIR10
Match: AT5G63130.1 (AT5G63130.1 Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30 Identity = 76/142 (53.52%), Postives = 98/142 (69.01%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TAIR10
Match: AT3G48240.1 (AT3G48240.1 Octicosapeptide/Phox/Bem1p family protein) HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27 Identity = 71/148 (47.97%), Postives = 91/148 (61.49%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TAIR10
Match: AT5G57610.1 (AT5G57610.1 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain) HSP 1 Score: 109.0 bits (271), Expect = 3.6e-24 Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 1
BLAST of CmoCh18G007710 vs. TAIR10
Match: AT1G04700.1 (AT1G04700.1 PB1 domain-containing protein tyrosine kinase) HSP 1 Score: 104.8 bits (260), Expect = 6.8e-23 Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 1
BLAST of CmoCh18G007710 vs. NCBI nr
Match: gi|449434979|ref|XP_004135273.1| (PREDICTED: uncharacterized protein LOC101222057 isoform X1 [Cucumis sativus]) HSP 1 Score: 352.1 bits (902), Expect = 6.9e-94 Identity = 185/210 (88.10%), Postives = 192/210 (91.43%), Query Frame = 1
BLAST of CmoCh18G007710 vs. NCBI nr
Match: gi|659090716|ref|XP_008446162.1| (PREDICTED: uncharacterized protein LOC103488970 [Cucumis melo]) HSP 1 Score: 351.3 bits (900), Expect = 1.2e-93 Identity = 185/210 (88.10%), Postives = 191/210 (90.95%), Query Frame = 1
BLAST of CmoCh18G007710 vs. NCBI nr
Match: gi|1009153481|ref|XP_015894659.1| (PREDICTED: uncharacterized protein LOC107428606 [Ziziphus jujuba]) HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63 Identity = 135/193 (69.95%), Postives = 153/193 (79.27%), Query Frame = 1
BLAST of CmoCh18G007710 vs. NCBI nr
Match: gi|147860904|emb|CAN80873.1| (hypothetical protein VITISV_004539 [Vitis vinifera]) HSP 1 Score: 232.6 bits (592), Expect = 6.1e-58 Identity = 131/191 (68.59%), Postives = 144/191 (75.39%), Query Frame = 1
BLAST of CmoCh18G007710 vs. NCBI nr
Match: gi|296080950|emb|CBI18643.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 231.9 bits (590), Expect = 1.0e-57 Identity = 131/191 (68.59%), Postives = 144/191 (75.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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