CmoCh18G007360 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G007360
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Chromatin assembly factor 1 subunit A, putative
Location	Cmo_Chr18 : 9090110 .. 9092572 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGGGTGTTATCTTACGAACCCATTAGAGAGCAAGAAGTTGGTTTGCTGATTGAATCGATTCCGCAATCAGCTTCATATGGAGTTGTTGTTGATCTTACTGAGAAGTCCACTACTCTCACTACTGGTGTTACTTTTAGAATTGCTTTTAGAAAACCGTGTTGAGGTAGCAAATTTCTGCTAGCTATTTTTTCCTTGTTATTAGTAGAGTCATTTGAGTTGTGTGCTTTTTCGTCTTTTCTGCGTTTCATGTATTTTTTCTATAAAAGGCATTGGAGCCTATGAATAAAGAATGATCATTTTTGGTACATATGCCAAGTATTTGTAATTTACCCCTATCATTTGGTATCAAAGCCAAAGCAAAACAAAGTGATCCAAGAGAGAAAATGAGCAACGACAAAACACTCACCAAGATTCCACCGTTTGATGGTTACTATGACCATTGGAGTGAACTGATGGAAAACCTCTTGCATGCCAAGGGTTTGTGGAGTCTAGTGGAAGAGGGTTACACCGAACCGGCAGAGGAAATCGAAGTGACTGCAGTGCAGAAAATGAATCTTGAGGCGTTCAAGATGGAGGACCATCAAGTGAAGCACTACCTGTTCCAAGCAATTGATCGGGTTGTGTTTCAACAGATCTTGAATCGCAAAAAAGCCAAGAACATTTGGGATTCGATGAAGAAAAAGTTTGGAGGCAACGAAAGGGTGAAGCGGTCTCTTCTCCAAACTTTAAGAAGAGATTTTGAGGTTCTTGAAATGAAGAACGAAGAAAACATCGATGATTATTTTGGAAGAGTAATGGTTGTCTCCAACAAGATGAGAAGCAACGGAGAAGACATGTCAAATTCGAAGATTGTTGAGAAAATACTTCGAACTCTGACTGACAAATTCACATATGTGGTGGTGGCCATCGAGGAGTCAAAAGACACAAGAAAGATGACGATTAACGAATTGCAAAGCTTTACATGAAAAGAAATTCAAGAAGATCAATCATGAAGAAGGTGATCAAGCTCTCAATGTCAAAGGTAGAGGCAGAGGATCATACAGAGGTCGAGGCAGGGGCAGAGGACGCTCATTCAATAAAGCAACAATCGAGTGTTACAACTGCCACCAACTTGGACATTTCTAATATGAATGTCCAAATGGGAACAATGGAGCACATTTTGCAGAGATCGAAGAAAAGGATGCAGTTCTTCTTATGACGTATGTGGATCTTCAAGGCACTAAGAGAGGAGATGTGTGGTTTGTGGATTCTGGGTGTTCAAACCATATGTGTGGAGAAAGAGGTATGTTCTCAAGCTTGGACACTAGCTTCACACATAATGTCAAGCTTGAAAACCATCACAAATGGATGGTTGGTGGGAAAGGAGTAGTGAAAATCATACTTAAGGGAATAAGCTATGTGATCAACGATGTGTATTATATTTCGGAATTGAAGAACAACCTGCTTAGTGTTGGACAACTTCAAGAAAGGGGTTTAGACGTGCTATTCAAAGGAGGAGATCGAAACACATGCAGCATTTTTCATCCCTCAAGAGGAAAAATAGTAGAATCTGTTATGAGTGCTAATAGGATGTTTATCCTGCTGGGTGAATCAAATCACAAAAGGGAGGAGGAAGAGATTGAAATGAAAAAGCAACTTAAGAAGCAGGAAGAGGACGCCGAAAAAGATCAACGTCGCAGACAGCGGGAAGAAGCTGAATAAAAAAAGAGACTTTCTATACTAAAGCAAGCATCCATAATGGAGCGTTTCCTTAAGAAAATCAAACGTAGTCCATCATGTCAAAATGATTATCCAACTACTGAATTGACTACATAGGTTCCATTGAGTAAACAGAGTGAAAACATGCTGGAGGCTTGTACGCAGTTCATGGACTGCCCTCTTTCTTCAAGCAATGTGATCAATTCTGTTGATATTCGCAGGCTGCACTTATCTTCTTGGCGCTTCATAGGTCATTCAATTCGTTCAAGAGAAAAGAATCACTGGACATTCGTCAGAAGTCAAAGTGTGATCTATTTAAGGAACTTAAACTTTCAAATGGCAGAGAATCTGCTAATGATGGTGAATTGGGTGAGAGAGGCTTGGGAAGAACAAATTACATATGATAGAACTAGTCATACAGAGTTCTGCAATAGTTTACCTCATGTTAATAAGTTGAATAGGGGGAAGGGGAAGCAGTTGTTGCAGTTTTCAAAGAGCTATAGGCCTGCTTTTTATGGCATTTGGTTCACAAAGAGTCATGTTGTTGGACCACACCATCCGTTTAGGAAGGACCCAAGTTTGGATTATGATATTGACAATGATGAAGAATGGGAAGAGGAGGATCCTGATGAAAGCCTCTCAGATTGTGATAAGGATGATGAAGAAAACTTAGAAGAGGAAGGTTGTGCAAAAGCGGAGGATGATGAAGACAGTGAAGATGGATTTTTTTGTCCCCGATGGATATCTCTCAAAAAATGA

mRNA sequence

ATGAAGAGGGTGTTATCTTACGAACCCATTAGAGAGCAAGAAGTTGGTTTGCTGATTGAATCGATTCCGCAATCAGCTTCATATGGAGTTGTTGTTCCATTGAGTAAACAGAGTGAAAACATGCTGGAGGCTTGTACGCAGTTCATGGACTGCCCTCTTTCTTCAAGCAATGTGATCAATTCTGTTGATATTCGCAGGCTGCACTTATCTTCTTGGCGCTTCATAGGTCATTCAATTCGTTCAAGAGAAAAGAATCACTGGACATTCGTCAGAAGTCAAAGTGTGATCTATTTAAGGAACTTAAACTTTCAAATGGCAGAGAATCTGCTAATGATGGTGAATTGGGTGAGAGAGGCTTGGGAAGAACAAATTACATATGATAGAACTAGTCATACAGAGTTCTGCAATAGTTTACCTCATGTTAATAAGTTGAATAGGGGGAAGGGGAAGCAGTTGTTGCAGTTTTCAAAGAGCTATAGGCCTGCTTTTTATGGCATTTGGTTCACAAAGAGTCATGTTGTTGGACCACACCATCCGTTTAGGAAGGACCCAAGTTTGGATTATGATATTGACAATGATGAAGAATGGGAAGAGGAGGATCCTGATGAAAGCCTCTCAGATTGTGATAAGGATGATGAAGAAAACTTAGAAGAGGAAGGTTGTGCAAAAGCGGAGGATGATGAAGACAGTGAAGATGGATTTTTTTGTCCCCGATGGATATCTCTCAAAAAATGA

Coding sequence (CDS)

ATGAAGAGGGTGTTATCTTACGAACCCATTAGAGAGCAAGAAGTTGGTTTGCTGATTGAATCGATTCCGCAATCAGCTTCATATGGAGTTGTTGTTCCATTGAGTAAACAGAGTGAAAACATGCTGGAGGCTTGTACGCAGTTCATGGACTGCCCTCTTTCTTCAAGCAATGTGATCAATTCTGTTGATATTCGCAGGCTGCACTTATCTTCTTGGCGCTTCATAGGTCATTCAATTCGTTCAAGAGAAAAGAATCACTGGACATTCGTCAGAAGTCAAAGTGTGATCTATTTAAGGAACTTAAACTTTCAAATGGCAGAGAATCTGCTAATGATGGTGAATTGGGTGAGAGAGGCTTGGGAAGAACAAATTACATATGATAGAACTAGTCATACAGAGTTCTGCAATAGTTTACCTCATGTTAATAAGTTGAATAGGGGGAAGGGGAAGCAGTTGTTGCAGTTTTCAAAGAGCTATAGGCCTGCTTTTTATGGCATTTGGTTCACAAAGAGTCATGTTGTTGGACCACACCATCCGTTTAGGAAGGACCCAAGTTTGGATTATGATATTGACAATGATGAAGAATGGGAAGAGGAGGATCCTGATGAAAGCCTCTCAGATTGTGATAAGGATGATGAAGAAAACTTAGAAGAGGAAGGTTGTGCAAAAGCGGAGGATGATGAAGACAGTGAAGATGGATTTTTTTGTCCCCGATGGATATCTCTCAAAAAATGA

Homology

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BLAST of CmoCh18G007360 vs. Swiss-Prot
Match: FAS1_ARATH (Chromatin assembly factor 1 subunit FAS1 OS=Arabidopsis thaliana GN=FAS1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 1


Query: 39  ENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQSVIYL 98
           EN +    Q +D   S++      DIRR H +SWR +GH + S +K HW   R       
Sbjct: 372 ENEIGKVVQAIDNAFSTTCEATVDDIRREHFASWRQLGHLLSSSKK-HWGMRRQPKSELF 431

Query: 99  RNLNFQMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLNRGKG---KQLLQF 158
             L       +    +      E+Q   D      F       +  NR K    KQLLQF
Sbjct: 432 PKLKLSTNSGV---TSDGEPNMEKQ--GDGCEENNFDGRQCKPSSSNRKKSRRVKQLLQF 491

Query: 159 SKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESLSDCDKDDEEN 218
            KS RP FYGIW ++S VV P  P +KDP LDY++D+DEEWEEE+  ESLSDC+KD++E+
Sbjct: 492 DKSCRPGFYGIWPSQSQVVKPRRPLQKDPELDYEVDSDEEWEEEEAGESLSDCEKDEDES 551

Query: 219 LEEEGCAKAEDDEDSEDGFFCP 238
           L EEGC+KA+D++DSED F  P
Sbjct: 552 L-EEGCSKADDEDDSEDDFMVP 566

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BLAST of CmoCh18G007360 vs. Swiss-Prot
Match: FAS1_ORYSJ (Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp. japonica GN=FSM PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-20
Identity = 75/214 (35.05%), Postives = 108/214 (50.47%), Query Frame = 1


Query: 38  SENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQSVIY 97
           ++ ++   T  +D   S        D+RRL +S W+ +    RS   + W          
Sbjct: 475 NKEVVPLVTSIIDSSFSQKENWALEDLRRLQISGWQKLSSYNRS---SRWGIRNKPKKEA 534

Query: 98  LRNLNFQM-AENLLMMVNWVREAWEEQITYDRT--SHTEFCNSLP----------HVNKL 157
            + L  Q  ++N+L  +    E     ++ +          + LP          H N L
Sbjct: 535 FKELKLQKTSDNMLEEILSPNEDTCHNLSQENEPDKSANDVDMLPAVELQFHGTNHANPL 594

Query: 158 -NRGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDE 217
             R   ++LLQF KS RPA+YG W  KS VVGP  P + DP LDY++D+D+EWEEEDP E
Sbjct: 595 PTRSIKRKLLQFDKSNRPAYYGTWRKKSAVVGPRCPLKMDPDLDYEVDSDDEWEEEDPGE 654

Query: 218 SLSDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SLSDC+KD++E +EE+       DE+SED FF P
Sbjct: 655 SLSDCEKDNDEVMEED---SKITDEESEDSFFVP 682

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BLAST of CmoCh18G007360 vs. Swiss-Prot
Match: CAF1A_CHICK (Chromatin assembly factor 1 subunit A OS=Gallus gallus GN=CHAF1A PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 1


Query: 136 NSLPHVNKLNRGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSL-DYDIDNDE 195
           +++P   K  R K   LLQF +++RPA++G W  K+ ++ P +P+ KD  L DY++D+DE
Sbjct: 522 DAVPERGKFGRMK---LLQFCENHRPAYWGTWNKKTTMIRPRNPWSKDSKLLDYEVDSDE 581

Query: 196 EWEEEDPDESLSDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           EWEEE+P ESLS  + DD    EEEG     +DED +DGFF P
Sbjct: 582 EWEEEEPGESLSHSEGDD----EEEG-----EDEDDDDGFFIP 612

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BLAST of CmoCh18G007360 vs. Swiss-Prot
Match: CAF1A_BOVIN (Chromatin assembly factor 1 subunit A OS=Bos taurus GN=CHAF1A PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-13
Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 1


Query: 136 NSLPHVNKLNRGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSL-DYDIDNDE 195
           + +P   K  R K   LLQFS+++RPA++G W  K+ V+ P  P+ +D  L DY++D+DE
Sbjct: 548 DGVPERRKFGRMK---LLQFSENHRPAYWGTWNKKTTVIRPRDPWAQDRDLLDYEVDSDE 607

Query: 196 EWEEEDPDESLSDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           EWEEE+P ESLS  + DD++++ E        DED +DGFF P
Sbjct: 608 EWEEEEPGESLSHSEGDDDDDVGE--------DEDEDDGFFVP 639

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BLAST of CmoCh18G007360 vs. Swiss-Prot
Match: CAF1A_MOUSE (Chromatin assembly factor 1 subunit A OS=Mus musculus GN=Chaf1a PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12
Identity = 39/88 (44.32%), Postives = 63/88 (71.59%), Query Frame = 1


Query: 151 QLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSL-DYDIDNDEEWEEEDPDESLSDCD 210
           +LLQFS+++RPA++G W  K+ ++ P +P+ +D  L DY++D+D+EWEEE+P ESLS  +
Sbjct: 537 KLLQFSENHRPAYWGTWNKKTAIIRPRNPWAQDKDLLDYEVDSDDEWEEEEPGESLSHSE 596

Query: 211 KDDEENLEEEGCAKAEDDEDSEDGFFCP 238
            D+++++ E        DED +DGFF P
Sbjct: 597 GDEDDDVGE--------DEDEDDGFFVP 616

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BLAST of CmoCh18G007360 vs. TrEMBL
Match: A0A0A0LMY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083770 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.2e-65
Identity = 138/212 (65.09%), Postives = 158/212 (74.53%), Query Frame = 1


Query: 30  VVVPLSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTF 89
           + VPLSK+SEN+L+ACTQ MDC LSSS+ I  VDIRR HLSSWR IG SIRSR + HW  
Sbjct: 420 ISVPLSKKSENVLQACTQLMDCTLSSSDAIIPVDIRRQHLSSWRLIGSSIRSRGEKHWGI 479

Query: 90  VRSQSVIYLRNLNF----QMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLN 149
            R       + L      + A +  +    + + WEEQIT   TS TE C++L  V K N
Sbjct: 480 RRKPKSELFKELKLSAGRESANDDELGEERLVDGWEEQITDAGTSQTELCSTLLDVRKSN 539

Query: 150 RGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESL 209
           RGK  QLLQF+KSYRPAFYGIW +KSHVVGP HPFRKDP LDYD+D+DEEWEEEDP ESL
Sbjct: 540 RGK--QLLQFAKSYRPAFYGIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESL 599

Query: 210 SDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SDCDKDDEE+LEEEGCAKAEDDE+SEDGFF P
Sbjct: 600 SDCDKDDEESLEEEGCAKAEDDEESEDGFFVP 629

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BLAST of CmoCh18G007360 vs. TrEMBL
Match: M5W3T3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001389mg PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.0e-50
Identity = 114/208 (54.81%), Postives = 137/208 (65.87%), Query Frame = 1


Query: 34  LSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQ 93
           LSK SENM E  TQ MD  LSS+  I + DIRRLH+SSWR +GHSIRS    HW   +  
Sbjct: 374 LSKNSENMAEVVTQSMDHTLSSNEEIIAEDIRRLHVSSWRHLGHSIRSNRNQHWGIRQKP 433

Query: 94  SVIYLRNLNFQMAENLL----MMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLNRGKG 153
                + L    ++ L+    +    + + W E ++ D++       SL  V K  RGK 
Sbjct: 434 KTELFKELKLTTSKGLVRGDDLSTERLVDRWREHVSDDKSCQANTDFSLTDVKKCKRGK- 493

Query: 154 KQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESLSDCD 213
            QLLQF KS RPAFYGIW  KSHVV P HPFRKDP LDYD+D+DEEWEEEDP ESLSDCD
Sbjct: 494 -QLLQFDKSCRPAFYGIWPKKSHVVRPCHPFRKDPDLDYDVDSDEEWEEEDPGESLSDCD 553

Query: 214 KDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           KDDEE   EEGC+KA+D+++SEDGFF P
Sbjct: 554 KDDEEEGLEEGCSKADDEDESEDGFFVP 579

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BLAST of CmoCh18G007360 vs. TrEMBL
Match: A0A067K3T3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18078 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-48
Identity = 112/206 (54.37%), Postives = 136/206 (66.02%), Query Frame = 1


Query: 36  KQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQSV 95
           K+SE M EA T  MDC LSS++ I   DIR+LHLSSW  +GH+IRS  K HW+  +    
Sbjct: 383 KKSEKMPEAVTMAMDCTLSSNDDIRIDDIRKLHLSSWHHLGHAIRSNRKQHWSIRQKPKT 442

Query: 96  IYLRNLNFQMAENLL----MMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLNRGKGKQ 155
              + L    A  L     ++V  +   W EQ + DR   T   +SL   N     + K+
Sbjct: 443 ELFKELKLTTARELSHDGELIVEKLESEWGEQSSDDRLCATNLESSL---NDKKWKRRKK 502

Query: 156 LLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESLSDCDKD 215
           LLQF KS+RPAFYGIW  KSHVVGP HPFRK+P LDYD+D+DEEWEEEDP ESLSDCDKD
Sbjct: 503 LLQFDKSHRPAFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKD 562

Query: 216 DEENLEEEGCAKAEDDEDSEDGFFCP 238
           DEE   EEGC+K +D+E+SEDGFF P
Sbjct: 563 DEEQSLEEGCSK-DDEEESEDGFFVP 584

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BLAST of CmoCh18G007360 vs. TrEMBL
Match: E6NU43_JATCU (JHL23J11.8 protein OS=Jatropha curcas GN=JHL23J11.8 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-48
Identity = 112/206 (54.37%), Postives = 136/206 (66.02%), Query Frame = 1


Query: 36  KQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQSV 95
           K+SE M EA T  MDC LSS++ I   DIR+LHLSSW  +GH+IRS  K HW+  +    
Sbjct: 383 KKSEKMPEAVTMAMDCTLSSNDDIRIDDIRKLHLSSWHHLGHAIRSNRKQHWSIRQKPKT 442

Query: 96  IYLRNLNFQMAENLL----MMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLNRGKGKQ 155
              + L    A  L     ++V  +   W EQ + DR   T   +SL   N     + K+
Sbjct: 443 ELFKELKLTTARELSHDGELIVEKLESEWGEQSSDDRLCATNLESSL---NDKKWKRRKK 502

Query: 156 LLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESLSDCDKD 215
           LLQF KS+RPAFYGIW  KSHVVGP HPFRK+P LDYD+D+DEEWEEEDP ESLSDCDKD
Sbjct: 503 LLQFDKSHRPAFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKD 562

Query: 216 DEENLEEEGCAKAEDDEDSEDGFFCP 238
           DEE   EEGC+K +D+E+SEDGFF P
Sbjct: 563 DEEQSLEEGCSK-DDEEESEDGFFVP 584

[Close]

BLAST of CmoCh18G007360 vs. TrEMBL
Match: W9SEC3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011785 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 8.2e-45
Identity = 105/209 (50.24%), Postives = 134/209 (64.11%), Query Frame = 1


Query: 34  LSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQ 93
           LSK    +  A TQ MDC LSSS  I+  DI + HL++WR +G SIRS    HW   R  
Sbjct: 385 LSKGCGKLPNAVTQSMDCTLSSSEDISVEDITKSHLAAWRCLGRSIRSNRNQHWGLRRKP 444

Query: 94  SVIYLRNLNFQMAENLLMMVNWVREAWE-----EQITYDRTSHTEFCNSLPHVNKLNRGK 153
                + L    +   +++++ + E        E ++ DR+  T    S+  V KL R K
Sbjct: 445 KSKLFKELKLTTSRPSIVVIDELNEEKHVDGCGECVSDDRSCRTNASCSVADVKKLTRAK 504

Query: 154 GKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESLSDC 213
             QLLQF KS+RPAFYGIW  KSHVVGP HP RKDP LDYDID+DEEWEEE+P ESLSDC
Sbjct: 505 --QLLQFDKSFRPAFYGIWPKKSHVVGPRHPLRKDPDLDYDIDSDEEWEEEEPGESLSDC 564

Query: 214 DKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           DKDDE+   ++GC+KA+D+++SEDGFF P
Sbjct: 565 DKDDEDESLQDGCSKADDEDESEDGFFVP 591

[Close]

BLAST of CmoCh18G007360 vs. TAIR10
Match: AT1G65470.1 (AT1G65470.1 chromatin assembly factor-1 (FASCIATA1) (FAS1))

HSP 1 Score: 127.9 bits (320), Expect = 8.7e-30
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 1


Query: 39  ENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTFVRSQSVIYL 98
           EN +    Q +D   S++      DIRR H +SWR +GH + S +K HW   R       
Sbjct: 372 ENEIGKVVQAIDNAFSTTCEATVDDIRREHFASWRQLGHLLSSSKK-HWGMRRQPKSELF 431

Query: 99  RNLNFQMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLNRGKG---KQLLQF 158
             L       +    +      E+Q   D      F       +  NR K    KQLLQF
Sbjct: 432 PKLKLSTNSGV---TSDGEPNMEKQ--GDGCEENNFDGRQCKPSSSNRKKSRRVKQLLQF 491

Query: 159 SKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESLSDCDKDDEEN 218
            KS RP FYGIW ++S VV P  P +KDP LDY++D+DEEWEEE+  ESLSDC+KD++E+
Sbjct: 492 DKSCRPGFYGIWPSQSQVVKPRRPLQKDPELDYEVDSDEEWEEEEAGESLSDCEKDEDES 551

Query: 219 LEEEGCAKAEDDEDSEDGFFCP 238
           L EEGC+KA+D++DSED F  P
Sbjct: 552 L-EEGCSKADDEDDSEDDFMVP 566

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BLAST of CmoCh18G007360 vs. NCBI nr
Match: gi|449442241|ref|XP_004138890.1| (PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X2 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 4.6e-65
Identity = 138/212 (65.09%), Postives = 158/212 (74.53%), Query Frame = 1


Query: 30  VVVPLSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTF 89
           + VPLSK+SEN+L+ACTQ MDC LSSS+ I  VDIRR HLSSWR IG SIRSR + HW  
Sbjct: 365 ISVPLSKKSENVLQACTQLMDCTLSSSDAIIPVDIRRQHLSSWRLIGSSIRSRGEKHWGI 424

Query: 90  VRSQSVIYLRNLNF----QMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLN 149
            R       + L      + A +  +    + + WEEQIT   TS TE C++L  V K N
Sbjct: 425 RRKPKSELFKELKLSAGRESANDDELGEERLVDGWEEQITDAGTSQTELCSTLLDVRKSN 484

Query: 150 RGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESL 209
           RGK  QLLQF+KSYRPAFYGIW +KSHVVGP HPFRKDP LDYD+D+DEEWEEEDP ESL
Sbjct: 485 RGK--QLLQFAKSYRPAFYGIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESL 544

Query: 210 SDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SDCDKDDEE+LEEEGCAKAEDDE+SEDGFF P
Sbjct: 545 SDCDKDDEESLEEEGCAKAEDDEESEDGFFVP 574

[Close]

BLAST of CmoCh18G007360 vs. NCBI nr
Match: gi|778668042|ref|XP_011649028.1| (PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X1 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 4.6e-65
Identity = 138/212 (65.09%), Postives = 158/212 (74.53%), Query Frame = 1


Query: 30  VVVPLSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTF 89
           + VPLSK+SEN+L+ACTQ MDC LSSS+ I  VDIRR HLSSWR IG SIRSR + HW  
Sbjct: 371 ISVPLSKKSENVLQACTQLMDCTLSSSDAIIPVDIRRQHLSSWRLIGSSIRSRGEKHWGI 430

Query: 90  VRSQSVIYLRNLNF----QMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLN 149
            R       + L      + A +  +    + + WEEQIT   TS TE C++L  V K N
Sbjct: 431 RRKPKSELFKELKLSAGRESANDDELGEERLVDGWEEQITDAGTSQTELCSTLLDVRKSN 490

Query: 150 RGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESL 209
           RGK  QLLQF+KSYRPAFYGIW +KSHVVGP HPFRKDP LDYD+D+DEEWEEEDP ESL
Sbjct: 491 RGK--QLLQFAKSYRPAFYGIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESL 550

Query: 210 SDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SDCDKDDEE+LEEEGCAKAEDDE+SEDGFF P
Sbjct: 551 SDCDKDDEESLEEEGCAKAEDDEESEDGFFVP 580

[Close]

BLAST of CmoCh18G007360 vs. NCBI nr
Match: gi|700206212|gb|KGN61331.1| (hypothetical protein Csa_2G083770 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 4.6e-65
Identity = 138/212 (65.09%), Postives = 158/212 (74.53%), Query Frame = 1


Query: 30  VVVPLSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTF 89
           + VPLSK+SEN+L+ACTQ MDC LSSS+ I  VDIRR HLSSWR IG SIRSR + HW  
Sbjct: 420 ISVPLSKKSENVLQACTQLMDCTLSSSDAIIPVDIRRQHLSSWRLIGSSIRSRGEKHWGI 479

Query: 90  VRSQSVIYLRNLNF----QMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLN 149
            R       + L      + A +  +    + + WEEQIT   TS TE C++L  V K N
Sbjct: 480 RRKPKSELFKELKLSAGRESANDDELGEERLVDGWEEQITDAGTSQTELCSTLLDVRKSN 539

Query: 150 RGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESL 209
           RGK  QLLQF+KSYRPAFYGIW +KSHVVGP HPFRKDP LDYD+D+DEEWEEEDP ESL
Sbjct: 540 RGK--QLLQFAKSYRPAFYGIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESL 599

Query: 210 SDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SDCDKDDEE+LEEEGCAKAEDDE+SEDGFF P
Sbjct: 600 SDCDKDDEESLEEEGCAKAEDDEESEDGFFVP 629

[Close]

BLAST of CmoCh18G007360 vs. NCBI nr
Match: gi|659082306|ref|XP_008441772.1| (PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X1 [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 138/212 (65.09%), Postives = 156/212 (73.58%), Query Frame = 1


Query: 30  VVVPLSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTF 89
           + VPLSK+ EN+LEACTQ MDC LSSS+ I  VDIRR HLSSWR IG SIRSR K HW  
Sbjct: 371 ISVPLSKRCENVLEACTQLMDCTLSSSDAIIPVDIRRQHLSSWRLIGSSIRSRGKKHWGI 430

Query: 90  VRSQSVIYLRNLNF----QMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLN 149
            +       + L      + A +  +    + + WEEQIT   TS TE C +L  V K N
Sbjct: 431 RQKPKSELFKELKLSAGRESANDDELGEERLVDGWEEQITDAGTSQTELCGTLLDVRKSN 490

Query: 150 RGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESL 209
           RGK  QLLQF+KSYRPAFYGIW +KSHVVGP HPFRKDP LDYD+D+DEEWEEEDP ESL
Sbjct: 491 RGK--QLLQFAKSYRPAFYGIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESL 550

Query: 210 SDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SDCDKDDEE+LEEEGCAKAEDDE+SEDGFF P
Sbjct: 551 SDCDKDDEESLEEEGCAKAEDDEESEDGFFVP 580

[Close]

BLAST of CmoCh18G007360 vs. NCBI nr
Match: gi|659082308|ref|XP_008441773.1| (PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X2 [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 1.0e-64
Identity = 138/212 (65.09%), Postives = 156/212 (73.58%), Query Frame = 1


Query: 30  VVVPLSKQSENMLEACTQFMDCPLSSSNVINSVDIRRLHLSSWRFIGHSIRSREKNHWTF 89
           + VPLSK+ EN+LEACTQ MDC LSSS+ I  VDIRR HLSSWR IG SIRSR K HW  
Sbjct: 365 ISVPLSKRCENVLEACTQLMDCTLSSSDAIIPVDIRRQHLSSWRLIGSSIRSRGKKHWGI 424

Query: 90  VRSQSVIYLRNLNF----QMAENLLMMVNWVREAWEEQITYDRTSHTEFCNSLPHVNKLN 149
            +       + L      + A +  +    + + WEEQIT   TS TE C +L  V K N
Sbjct: 425 RQKPKSELFKELKLSAGRESANDDELGEERLVDGWEEQITDAGTSQTELCGTLLDVRKSN 484

Query: 150 RGKGKQLLQFSKSYRPAFYGIWFTKSHVVGPHHPFRKDPSLDYDIDNDEEWEEEDPDESL 209
           RGK  QLLQF+KSYRPAFYGIW +KSHVVGP HPFRKDP LDYD+D+DEEWEEEDP ESL
Sbjct: 485 RGK--QLLQFAKSYRPAFYGIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESL 544

Query: 210 SDCDKDDEENLEEEGCAKAEDDEDSEDGFFCP 238
           SDCDKDDEE+LEEEGCAKAEDDE+SEDGFF P
Sbjct: 545 SDCDKDDEESLEEEGCAKAEDDEESEDGFFVP 574

The following BLAST results are available for this feature:

BLAST of CmoCh18G007360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAS1_ARATH	1.5e-28	42.08	Chromatin assembly factor 1 subunit FAS1 OS=Arabidopsis thaliana GN=FAS1 PE=1 SV...	[more]
FAS1_ORYSJ	2.6e-20	35.05	Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp. japonica GN=FSM P...	[more]
CAF1A_CHICK	2.4e-13	46.60	Chromatin assembly factor 1 subunit A OS=Gallus gallus GN=CHAF1A PE=1 SV=1	[more]
CAF1A_BOVIN	4.1e-13	44.66	Chromatin assembly factor 1 subunit A OS=Bos taurus GN=CHAF1A PE=2 SV=1	[more]
CAF1A_MOUSE	3.5e-12	44.32	Chromatin assembly factor 1 subunit A OS=Mus musculus GN=Chaf1a PE=1 SV=1	[more]

BLAST of CmoCh18G007360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMY1_CUCSA	3.2e-65	65.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083770 PE=4 SV=1	[more]
M5W3T3_PRUPE	5.0e-50	54.81	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001389mg PE=4 SV=1	[more]
A0A067K3T3_JATCU	4.6e-48	54.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18078 PE=4 SV=1	[more]
E6NU43_JATCU	4.6e-48	54.37	JHL23J11.8 protein OS=Jatropha curcas GN=JHL23J11.8 PE=4 SV=1	[more]
W9SEC3_9ROSA	8.2e-45	50.24	Uncharacterized protein OS=Morus notabilis GN=L484_011785 PE=4 SV=1	[more]

BLAST of CmoCh18G007360 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65470.1	8.7e-30	42.08	chromatin assembly factor-1 (FASCIATA1) (FAS1)	[more]

BLAST of CmoCh18G007360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442241\|ref\|XP_004138890.1\|	4.6e-65	65.09	PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X2 [Cucumis sativus]	[more]
gi\|778668042\|ref\|XP_011649028.1\|	4.6e-65	65.09	PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X1 [Cucumis sativus]	[more]
gi\|700206212\|gb\|KGN61331.1\|	4.6e-65	65.09	hypothetical protein Csa_2G083770 [Cucumis sativus]	[more]
gi\|659082306\|ref\|XP_008441772.1\|	1.0e-64	65.09	PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X1 [Cucumis melo]	[more]
gi\|659082308\|ref\|XP_008441773.1\|	1.0e-64	65.09	PREDICTED: chromatin assembly factor 1 subunit FAS1 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022043	CAF1A

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006325	chromatin organization
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G007360.1	CmoCh18G007360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022043	Chromatin assembly factor 1 subunit A	PANTHER	PTHR15272	CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A	coord: 151..237 score: 5.3
IPR022043	Chromatin assembly factor 1 subunit A	PFAM	PF12253	CAF1A	coord: 152..218 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G007360	Wild cucumber (PI 183967)	cmocpiB407
CmoCh18G007360	Cucumber (Chinese Long) v2	cmocuB402
CmoCh18G007360	Melon (DHL92) v3.5.1	cmomeB347
CmoCh18G007360	Watermelon (Charleston Gray)	cmowcgB360
CmoCh18G007360	Watermelon (97103) v1	cmowmB367
CmoCh18G007360	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G007360	Bottle gourd (USVL1VR-Ls)	cmolsiB368
CmoCh18G007360	Cucumber (Gy14) v2	cgybcmoB600
CmoCh18G007360	Melon (DHL92) v3.6.1	cmomedB398
CmoCh18G007360	Cucumber (Chinese Long) v3	cmocucB0484
CmoCh18G007360	Wax gourd	cmowgoB0539
CmoCh18G007360	Cucurbita moschata (Rifu)	cmocmoB341
CmoCh18G007360	Cucumber (Gy14) v1	cgycmoB0790
CmoCh18G007360	Cucurbita maxima (Rimu)	cmacmoB406