CmoCh18G006790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGGCGGCTGCTGCTGCTGCTGCTGAGAATGGGATATCCAGGGAAGTGCAGCTTTCTATGGCGGTTTCTTCTATGTTTCCTGGTTTTCGGTTTTCGCCGACTGATGAAGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGCTACGAGAAGAGCGTTGAAGTGATTGTGGAGATTGAAATTTATAAGTACGAACCCTGGGACTTACCTGGTCAGTGTTTGCTTATATGATCTTGTATTCTTACTTCTGTCTCTGCATCTGAGCCCTAGGCAAAAACCCTACGTTCAACTTTGAATTTCTTTGAAATGAATCATCTATGGCTATTTCCAATTCTTTTGGGCTTTTTCTGGTGTTTGATTAGAACTGTTTGCTTTCTTCGTGTGATCAGCTAAGTCTATAATTCAATCCGATAATGAGTGGTTCTTCTTCTCCCCTCGGGGAAAAAAGTACCCGAAGGGTAATCAGACCAGGAGAGCGACTGATTCAGGGTACTGGAAAGCCACAGGGAAAGAGCGTAATGTAAAGTCAGGTTCCAATGTTATTGGTACCAAGAGGACTCTGGTTTTCCATACTGGCCGTGCACCAAAAGGGGAAAGGACAGAGTGGATTATGCATGAATTTAACGCCAAGGATAAAGCTCAGGTAAGTTTCTTTATGTTATTGGTGATCAATTTGGAAAATGTTGATAACTTTTGGAGCAAATTTTCTCATTCAACTTGTGGCTTGTTTGAGAAACTGTTGTAGGATAAACAATTTGATTACCCTGTTTTGCTGAATTTCCAAAGCAGCTCTTACTTTTGGTGGTGACCCTATGGTGATTTGGTGTCATCGTGTTACTTTTAACCACTCTGTCACTCGTTTCCATGTTGGATAAATATGTCTTGTATGGATTTTTTCGCCTTTATCGTCCGCCTCACGTGCTGAACTAGGAATCTGTCGAAGTATGGTGAAACTTCACTTTGAGAAGTTTATCTACTCTAGGAAAAAAATGCCTGATATAGTTTGAATTAGTATAGGAAGTGTTACAACAATTCGATTGTATCGATACATCTTTGAGGTCTAGGCTTTAGATTGTGTAGTGAATGAATAGTAGTGGTACATGGTTGTTTCCTATGTTTATTCTGAACCTTGATGGTAACTTTGCATGATTATGAGTCCAGTTGAAGGTAAATCATTGGAGCTTTTAGCAAGGGGCTTCTTAGTTGGGAGTCGAACTGCTGGTAAGTTCCATGCATTCATGTTATGAATTGATCTGCTTCAAGACGACAAGGAGTGATCTGTTTTGATAAAAAATCGAGGTCGAACAATCTGGATCTGCTTTTTTTTTTAAGCTTAGAATAAGGTAGGTAAAAGAAACCTAAAATTAATGGCTGGAAAAATAACATAAACAGAGCTAAAGCTGCAGAAAACAACTAGAGATAGAAGCCCAAAAAGAAACTCATGACCCATTATGAAATCTAAATCTAGATTTGTAAATTAAATGTAAGGCAAAAGCCCCCGAGGAGAGGCAGCCATGTTGAATTATCCTCGTTATCTGTGAGCAACACCCACCCAGAGTTCGCGTGTTCAAATCTTCAAGTGAGTTTAAGGGAAACCCTTGATGGCTCCAAAGTTTGGATCTTAGGAGCTCAGACTTTGAAAAAGAAAGAAAAAATTCAAGCGAAGTTTGAAGTCCTATACAAAAGTTAAATGAAGGTTTCATTATCTTTTTGAGCCATCGAACATCCAAGAGGTAGCCTCATTGGCTTAATGCTCACACTCAGTGATACCCACCTGGAATTTGTGTGCTTGAATCTTCAAGTGAGTTTAGTTAGGGAGACCCATGATGTCTTTAGATTTTAGGTTTTAGGGCGAGAACACACTTCGAAAAAAGAAAGTAAATGTTAAGCAAAGTTAGAAGTTCTATACAAAAGTTAAATAAAAACTTCATTGTCAACCATCATGAGTTGGCCTAGTGATCAATAAGGCCCATGATAATAATAAGTAGCTTAGAAGGAATGAGTTTAACCCATGGAGTGACCGGTTTCCTGGCAACTAAATGTAGTAGAATCGAAGAATTTGTCTTATGAGATTAGTTGAGGTGAGTGCAAGATGATCCAAACATTCACGGATATTAAAGAAACAAAAAGGCTTCATTGTCTTTTTGAACCCTCAAACACCACCATGTATGATTGTGAGCTTATTGCCCGAACTTGAAAGATCTTTTGCGTAATAGAATCTTATTGATCTATATGCTCATTGTTGTATGTGTTGATAATCATAACTGATCTAACCAACACATGCTTTAGGGTTGATTTTATTTATCATAGGCATGGATTACTAATTGGCTATGATTTAAAGCTAACTTAGTGCTTTGAGTTTTATACCATTAAATCCTCGAAGAAAAAAATACCTAATGTTGAAATTGAAGGGCCATTAGCATGCATACTTAATATAAACAATCAGGATTATCATGTATGGTGTTTGATTTTAACTTGGAAAAAGTTTGATAAACCACAGTGCAAAGTTGAGTTGATTCATTCATTGACCTTGCCTATTAATCTTATTGACAAGAATAGTTGCACTTCTTTTCGGGCACCTTGTATGTAACAGCTCAAGCCCACCGCTAGCAGATATTGTCTCTTTTGGGGAGAGGTTTTCACACTCTTATAAAGAATGTTTCGTTCTCCTCCCCAACTAATGTAGGATCTCACATTGTATATATTTAGTATTTTGAATTCAAACAAAATTGATGAACTATCTTTTGAATGGCGCAGGATTTTCTAGTTGTTTGCCGCCTTAGGAGGAATAATGAATTTCGTCAACATAGTTGCTCAAACCGAGCTGCTTCAAGCCAAATGAATTTATCCTCGTTGCAAGCTCATTCTGGCGAGCAGGTCGATTTTACATCTGAGTCCAATCAAAAAGATGTCGCAGAAGCTGCACCTGTGGAGTCTTCTGGTGATCAGAAGGTAAGTTCTAATATCCTGTCACCATTAGTCTTGTTGTTCGAAGTATATTTATGCCATGGATCTGTAGATTTCTAGGTACTCCTTTTACCGATCTTAACATGGAAACAATTGACTGTATATTCAAAAATTTCATCTCATCCCTTATACTTCTGAAAGCTAGAGGCTTAATGAGAACAATATAATATATTTTTGTTGCACCAAGATATATTTGCAGCCTAGATCATTTGATTGGACTGAAATTTGAAATGAGTACACTTGACGATATGAATCATTTGAAAAATAAACAGATTCGTTCTATTGCGGATCTCTTACAAGATCAATTCGGATTGACTCTAGTTCGTTTAAAAATATGGTTAGAGGAACTATATGTGGAGCAATTAGACATAAATTGATACCGACTCCTAAGAATATTCTCTTCTAGTACCCCTACACATCGACTACTAAAGCCCCACGTTGTTGATTCCAGGATTATGGTTCTGATGATTTCTACTCCGATATACTAAAAGACGACATTCTTAACCTGGATGCATCTGCGCCTTACAATGCTGCTTCGGATCTGTTCCCACTGGTTTTCCATAGATCAGATGCAGAGAGAAAGTACCAGCAGGACTGGAATGACTATTTGGAATGGCTACCGAACCAAGGCTGTGCAAATCGGAGAATCAGATTGAAATGGAAAGAAGCCATTGGAGCAAAGAAGTTGGAGGCTATGCAAAATGGTGATTCCAGATACATGGTTGAGAAATCAAGGCTATCATCCTCAGAACTATCACAAATCCAGTTGATGAACACTGCTTCTTCGGTTAGCGTTGTTCGGGGCTATGCTCGAATCGTGATATTTTCTTTGTTGATTTTGTTAGCTTTGTTTGTCTCGATTGGAGGTTTTTGGTATGCCTAAGGGACTCTACTGATCTTTCTATGCTAATGTGCCATAAGAGATTATTTTAAATGTGTAGTGTATATATATAGAGGTGTCAAATGTGGATTCTATATAATTCACAAAGGAAATTTTGAATTCTTTTAACAAGATTCATTAGTTGGGCTTTAGCAATCAGTGTTTATCAAGAGCTTTATCGGTGTTAATTGTGATTTGTATAAGTTGGG ATGGCGGCGGCGGCTGCTGCTGCTGCTGCTGAGAATGGGATATCCAGGGAAGTGCAGCTTTCTATGGCGGTTTCTTCTATGTTTCCTGGTTTTCGGTTTTCGCCGACTGATGAAGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGCTACGAGAAGAGCGTTGAAGTGATTGTGGAGATTGAAATTTATAAGTACGAACCCTGGGACTTACCTGCTAAGTCTATAATTCAATCCGATAATGAGTGGTTCTTCTTCTCCCCTCGGGGAAAAAAGTACCCGAAGGGTAATCAGACCAGGAGAGCGACTGATTCAGGGTACTGGAAAGCCACAGGGAAAGAGCGTAATGTAAAGTCAGGTTCCAATGTTATTGGTACCAAGAGGACTCTGGTTTTCCATACTGGCCGTGCACCAAAAGGGGAAAGGACAGAGTGGATTATGCATGAATTTAACGCCAAGGATAAAGCTCAGGATTTTCTAGTTGTTTGCCGCCTTAGGAGGAATAATGAATTTCGTCAACATAGTTGCTCAAACCGAGCTGCTTCAAGCCAAATGAATTTATCCTCGTTGCAAGCTCATTCTGGCGAGCAGGTCGATTTTACATCTGAGTCCAATCAAAAAGATGTCGCAGAAGCTGCACCTGTGGAGTCTTCTGGTGATCAGAAGGATTATGGTTCTGATGATTTCTACTCCGATATACTAAAAGACGACATTCTTAACCTGGATGCATCTGCGCCTTACAATGCTGCTTCGGATCTGTTCCCACTGGTTTTCCATAGATCAGATGCAGAGAGAAAGTACCAGCAGGACTGGAATGACTATTTGGAATGGCTACCGAACCAAGGCTGTGCAAATCGGAGAATCAGATTGAAATGGAAAGAAGCCATTGGAGCAAAGAAGTTGGAGGCTATGCAAAATGGTGATTCCAGATACATGGTTGAGAAATCAAGGCTATCATCCTCAGAACTATCACAAATCCAGTTGATGAACACTGCTTCTTCGGTTAGCGTTGTTCGGGGCTATGCTCGAATCGTGATATTTTCTTTGTTGATTTTGTTAGCTTTGTTTGTCTCGATTGGAGGTTTTTGGTATGCCTAAGGGACTCTACTGATCTTTCTATGCTAATGTGCCATAAGAGATTATTTTAAATGTGTAGTGTATATATATAGAGGTGTCAAATGTGGATTCTATATAATTCACAAAGGAAATTTTGAATTCTTTTAACAAGATTCATTAGTTGGGCTTTAGCAATCAGTGTTTATCAAGAGCTTTATCGGTGTTAATTGTGATTTGTATAAGTTGGG ATGGCGGCGGCGGCTGCTGCTGCTGCTGCTGAGAATGGGATATCCAGGGAAGTGCAGCTTTCTATGGCGGTTTCTTCTATGTTTCCTGGTTTTCGGTTTTCGCCGACTGATGAAGAGTTGATTTCGTTTTACCTCAAGAAGAAATTGGAAGGCTACGAGAAGAGCGTTGAAGTGATTGTGGAGATTGAAATTTATAAGTACGAACCCTGGGACTTACCTGCTAAGTCTATAATTCAATCCGATAATGAGTGGTTCTTCTTCTCCCCTCGGGGAAAAAAGTACCCGAAGGGTAATCAGACCAGGAGAGCGACTGATTCAGGGTACTGGAAAGCCACAGGGAAAGAGCGTAATGTAAAGTCAGGTTCCAATGTTATTGGTACCAAGAGGACTCTGGTTTTCCATACTGGCCGTGCACCAAAAGGGGAAAGGACAGAGTGGATTATGCATGAATTTAACGCCAAGGATAAAGCTCAGGATTTTCTAGTTGTTTGCCGCCTTAGGAGGAATAATGAATTTCGTCAACATAGTTGCTCAAACCGAGCTGCTTCAAGCCAAATGAATTTATCCTCGTTGCAAGCTCATTCTGGCGAGCAGGTCGATTTTACATCTGAGTCCAATCAAAAAGATGTCGCAGAAGCTGCACCTGTGGAGTCTTCTGGTGATCAGAAGGATTATGGTTCTGATGATTTCTACTCCGATATACTAAAAGACGACATTCTTAACCTGGATGCATCTGCGCCTTACAATGCTGCTTCGGATCTGTTCCCACTGGTTTTCCATAGATCAGATGCAGAGAGAAAGTACCAGCAGGACTGGAATGACTATTTGGAATGGCTACCGAACCAAGGCTGTGCAAATCGGAGAATCAGATTGAAATGGAAAGAAGCCATTGGAGCAAAGAAGTTGGAGGCTATGCAAAATGGTGATTCCAGATACATGGTTGAGAAATCAAGGCTATCATCCTCAGAACTATCACAAATCCAGTTGATGAACACTGCTTCTTCGGTTAGCGTTGTTCGGGGCTATGCTCGAATCGTGATATTTTCTTTGTTGATTTTGTTAGCTTTGTTTGTCTCGATTGGAGGTTTTTGGTATGCCTAA
BLAST of CmoCh18G006790 vs. Swiss-Prot
Match: NAC89_ARATH (NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65 Identity = 136/245 (55.51%), Postives = 174/245 (71.02%), Query Frame = 1
BLAST of CmoCh18G006790 vs. Swiss-Prot
Match: NAC40_ARATH (NAC domain-containing protein 40 OS=Arabidopsis thaliana GN=NTL8 PE=1 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.3e-63 Identity = 129/237 (54.43%), Postives = 168/237 (70.89%), Query Frame = 1
BLAST of CmoCh18G006790 vs. Swiss-Prot
Match: NAC60_ARATH (NAC domain-containing protein 60 OS=Arabidopsis thaliana GN=NAC60 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62 Identity = 133/237 (56.12%), Postives = 165/237 (69.62%), Query Frame = 1
BLAST of CmoCh18G006790 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.3e-43 Identity = 85/156 (54.49%), Postives = 114/156 (73.08%), Query Frame = 1
BLAST of CmoCh18G006790 vs. Swiss-Prot
Match: NAC45_ARATH (NAC domain-containing protein 45 OS=Arabidopsis thaliana GN=NAC045 PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 7.4e-43 Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TrEMBL
Match: A0A0A0LYC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168870 PE=4 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 1.2e-145 Identity = 280/355 (78.87%), Postives = 304/355 (85.63%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TrEMBL
Match: W9RH24_9ROSA (NAC domain-containing protein 89 OS=Morus notabilis GN=L484_016315 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 6.2e-89 Identity = 202/386 (52.33%), Postives = 257/386 (66.58%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TrEMBL
Match: V4UDK9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028618mg PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 6.0e-84 Identity = 198/386 (51.30%), Postives = 245/386 (63.47%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TrEMBL
Match: W6JBA9_GOSHI (NAC domain protein NAC62 OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 5.1e-83 Identity = 197/395 (49.87%), Postives = 249/395 (63.04%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TrEMBL
Match: A0A0D2UIG0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G083500 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 5.1e-83 Identity = 197/395 (49.87%), Postives = 249/395 (63.04%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TAIR10
Match: AT5G22290.1 (AT5G22290.1 NAC domain containing protein 89) HSP 1 Score: 251.5 bits (641), Expect = 7.8e-67 Identity = 136/245 (55.51%), Postives = 174/245 (71.02%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TAIR10
Match: AT2G27300.1 (AT2G27300.1 NTM1-like 8) HSP 1 Score: 245.0 bits (624), Expect = 7.3e-65 Identity = 129/237 (54.43%), Postives = 168/237 (70.89%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TAIR10
Match: AT3G44290.1 (AT3G44290.1 NAC domain containing protein 60) HSP 1 Score: 241.9 bits (616), Expect = 6.2e-64 Identity = 133/237 (56.12%), Postives = 165/237 (69.62%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TAIR10
Match: AT1G65910.1 (AT1G65910.1 NAC domain containing protein 28) HSP 1 Score: 181.0 bits (458), Expect = 1.3e-45 Identity = 88/167 (52.69%), Postives = 120/167 (71.86%), Query Frame = 1
BLAST of CmoCh18G006790 vs. TAIR10
Match: AT1G33060.2 (AT1G33060.2 NAC 014) HSP 1 Score: 176.8 bits (447), Expect = 2.5e-44 Identity = 85/156 (54.49%), Postives = 114/156 (73.08%), Query Frame = 1
BLAST of CmoCh18G006790 vs. NCBI nr
Match: gi|659127324|ref|XP_008463642.1| (PREDICTED: NAC domain-containing protein 89-like isoform X2 [Cucumis melo]) HSP 1 Score: 534.6 bits (1376), Expect = 1.3e-148 Identity = 283/355 (79.72%), Postives = 308/355 (86.76%), Query Frame = 1
BLAST of CmoCh18G006790 vs. NCBI nr
Match: gi|659127322|ref|XP_008463641.1| (PREDICTED: NAC domain-containing protein 89-like isoform X1 [Cucumis melo]) HSP 1 Score: 530.0 bits (1364), Expect = 3.2e-147 Identity = 283/356 (79.49%), Postives = 308/356 (86.52%), Query Frame = 1
BLAST of CmoCh18G006790 vs. NCBI nr
Match: gi|449443648|ref|XP_004139589.1| (PREDICTED: protein NTM1-like 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 524.2 bits (1349), Expect = 1.8e-145 Identity = 280/355 (78.87%), Postives = 304/355 (85.63%), Query Frame = 1
BLAST of CmoCh18G006790 vs. NCBI nr
Match: gi|659127326|ref|XP_008463643.1| (PREDICTED: NAC domain-containing protein 89-like isoform X3 [Cucumis melo]) HSP 1 Score: 416.8 bits (1070), Expect = 4.0e-113 Identity = 222/288 (77.08%), Postives = 244/288 (84.72%), Query Frame = 1
BLAST of CmoCh18G006790 vs. NCBI nr
Match: gi|659127330|ref|XP_008463646.1| (PREDICTED: NAC domain-containing protein 89-like isoform X5 [Cucumis melo]) HSP 1 Score: 416.8 bits (1070), Expect = 4.0e-113 Identity = 222/288 (77.08%), Postives = 244/288 (84.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |