CmoCh18G006770 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G006770
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionOTU-like cysteine protease family protein
LocationCmo_Chr18 : 8641740 .. 8644473 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATCGCTGCTTCAATGTTGACAAGGATAAAGTGAAGGCTGCATTAGAAGTGCAGCAAGATCAACCTGTACTCTTAAATTCTAGATAACATGATTTTGTTCTTTTGTTTAATTGAGAGTAAGTAATATTCATTTTGTTCATCTTTTCTTCATTGACAGGCTCTTCTTGCTCAAGGGCAGTATTTCTCAGATCTTGTCGATACCGAAAAGGAGATCGAGCAGATGGTGATGGAAGCTTCAAGAGCTGGATATCTCGTTAGATACTCATTGAAGCAGCAATTGGACCGAAGAGACAACTCCACATCGGGGGCTGAACCATTGTCATCAGGCGTGAGTACGTGATATGGAATCAACCCAAGGGAAAGTATGGAACGGATTACCTTGATCATCAAGATCAAAAGTAAAGAAAACTCGTTTTTAAACTCTTCATTCGAATCACTTCATAATAGGTTTGATCAATACCACTTGAATGACTCTAGCATGCAAGTTCTAAATACAAGAATTTGCAAAAAAAAAATCTTAGCTCTCAATCAAGCTAAAAAAAATAGATTTTTTTTTTAATTGAATAATTTGAGATCTCTAAGGGAAGAAAAGAAGGCTTTAGAGAGCCTTTAGAACCTTACTACCTAATTAAATTGGCTAGTAAATCAGAAATACTCATAATCTCCATATTAAATAACTGATGGTGAAATATAATAACCCATGTGTTACAATATAACCTGAACTCCAAATATTTAAATTATAATTAAATAGTGAAATGTGTTTATTAGTCATCCTTTCACTAGTTCCATAAATTTAACAGTGCATCTTTTTTTAAGCTCAACTTTGCACAAAATGTTATGTTAGCATGCATCTTTTTTTTAAGCTCAACTTTTCTTAAAGCATCGTATCGCTCAAAATGTTTCATCGATTTATATGTTAAAGAGTTACCATTATCTTTACACCCGTTATTTTCTTTTAAAAAAAAGGTAATTATTTTGACCAAAATATATATTCTTGCATCATAATTTTCATATTGAGCTTAGTTAACACATCTCTTCTTTTTTATAAGGTTTTAGGGCAAATTCTATCGCCCTACATATGTTACATCTTAGAAATGCATAATAGAGAGAAATTCTAAAGATCACTTTACATTGCAAGACATTGTTAATTAGAGAATTCGTGGCACTTGAAATGAAAAGGTAATTATAAGGATAAAATAGACTTTTGACCCAACTGTAATTATAAACGATTTGACTGGTTTGTAATGACTTAAAGTGCAAGGTTTATAGTAGAATTGTTTGTGAGAGAATCAGTGGTACTTGAAATTACATAAAAGTATAAGGTCTGTAGTGGAATTACATAAAAAGTGCCAGGTCTATAATGGAATTCTTGGTTAAAGAATTAGTGGTACTTGAGATGAAAGGTAATTGCGGGAATAAAAATAAATAAATTTTTATCATATAGTGCATAAAATTGCAACCACTTATAGTTAATAAATGTAAATTAGTTAATTAAAGAGCTTAGTTAATTAATTTTACATCATTAGATGTAATTATAATTAGATAAGAAAGATGTCACTGTTCTTTCGAGTAGAAATCTTCAAGCGCAACTCCTTATCTTATTGACTAATCTATGAGCTCTTTAGGCTCGGTGGCCTCCCCGGCGAAGCATACAAGGCTTTCATGCACAACCTTCATCTTCACACACGAAGAAAGTCAGGTGCATAGTGGACAAAAAAGGACAAAGGTACAAGTTTGACGTTTTATTACACGTTATTGAACTCCTAAATACATGTACTTCTATGCTTGATGAGGTCAATCACGACATCCAAAACACAATTCCTATTACGTGGACATGGTTTGATGTTGATCCTTTGACCTAAATGGTCATGATTCTAACTTCTAACTTCTTGTTCACGATAACTTTTCGTGTTCGCATCTTCACACACTAGGACCACCACTAAATTAAGTTTATAAGGCCGATCCCTCGACAACATGTGACACACATGTTCAAGGATGTAAATGTGGAGAGCATGAATAGCCGTTTAACCTTAGGATGTACTAGAAAAAAAATCATATCCTTCTTGTTGCGTTGAAGCATCAAGTTGAGCATGATCAACGACCTCTATCATGTGGCATACACCCGATCATATTATATATATTATGGTTCCAAGCTTAATATTAAAAACCCATCGTATTGTTATTATCTTTTTTGTTAGAAAAATCCATCAAAATCTCCGAAGCGATAGGACAAGTCATGGTGATGAATGAGAAAGACACATTGTCCCTGAGTTCGGTTAATAATGAATGCTGCACCTGAAGAACCACAAAAAGAGGAACATACTGCGGAATACTTTAAGTAGAGAGAAATTATGTCAAGCGGATCGAAAGACGCCTAAAGAATCAAACAAAGAATGAATGACTGCAATGAAGCAAGCCAAGATTGGACTGAACAAAAGTTTGTCACTGTTAAAGAGAAGTCTTTAAAGCTACGCTTTCGATCCCGTAAATGGAACGAATTAAAAATAAGTCAAAAGATTTATTAAATTCAAAATTAAAATCTTTTTAAATTTAAGGGCTAAATTATAATTTAATTATTAAGAAAGCATTTATTTTATTTAAGAAGCTGAGAGGTGCGGGCGTTGGGGTGAAGGTCAGGTGGTGTAAGCATCCGGTCGGCATCCGGCAAGAACAGCAGCAAGAGGTGCGAGGTGATTCAATCTCCATGTGCACGCCCACAGTAGTCTGA

mRNA sequence

ATGTGGAATCGCTGCTTCAATGTTGACAAGGATAAAGTGAAGGCTGCATTAGAAGTGCAGCAAGATCAACCTGCTCTTCTTGCTCAAGGGCAGTATTTCTCAGATCTTGTCGATACCGAAAAGGAGATCGAGCAGATGGTGATGGAAGCTTCAAGAGCTGGATATCTCAAGCTGAGAGGTGCGGGCGTTGGGGTGAAGGTCAGGTGGTGTAAGCATCCGGTCGGCATCCGGCAAGAACAGCAGCAAGAGGTGCGAGGTGATTCAATCTCCATGTGCACGCCCACAGTAGTCTGA

Coding sequence (CDS)

ATGTGGAATCGCTGCTTCAATGTTGACAAGGATAAAGTGAAGGCTGCATTAGAAGTGCAGCAAGATCAACCTGCTCTTCTTGCTCAAGGGCAGTATTTCTCAGATCTTGTCGATACCGAAAAGGAGATCGAGCAGATGGTGATGGAAGCTTCAAGAGCTGGATATCTCAAGCTGAGAGGTGCGGGCGTTGGGGTGAAGGTCAGGTGGTGTAAGCATCCGGTCGGCATCCGGCAAGAACAGCAGCAAGAGGTGCGAGGTGATTCAATCTCCATGTGCACGCCCACAGTAGTCTGA
Homology
[Close]
BLAST of CmoCh18G006770 vs. TrEMBL
Match: A0A0A0LVH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166830 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-11
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           NVDKDKVKAAL+ QQDQ    ALLAQG+YFSDL  TEKEIEQMVMEASRA YL
Sbjct: 388 NVDKDKVKAALKAQQDQQLDNALLAQGRYFSDLEVTEKEIEQMVMEASRAEYL 440

[Close]
BLAST of CmoCh18G006770 vs. TrEMBL
Match: A0A0K9QLD9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166130 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-09
Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYLKLRGAGV 66
           NVDKD+VKAA++ QQDQ    ALLA+G+++SDL  TEKEIE+ VMEASRA YL       
Sbjct: 363 NVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERTVMEASRAEYL------- 422

Query: 67  GVKVRWCKHPVGIRQEQQQEVRGDSISMCTPT 96
                      G + +Q   +RG S S+  P+
Sbjct: 423 ----------AGNKSKQHVGLRGSSTSIAEPS 437

[Close]
BLAST of CmoCh18G006770 vs. TrEMBL
Match: A0A0D9W4Q6_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-09
Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYLKLRGAGV 66
           NVD+D+VKAA++ QQDQ    ALLA+G+ +SDL  TEKEIE+MVMEASRA YLK      
Sbjct: 388 NVDRDQVKAAIKAQQDQQIENALLAEGRLYSDLELTEKEIERMVMEASRAEYLK------ 447

Query: 67  GVKVRWCKHPVGIRQEQQQEVRGDSISMCTPT 96
                        +QEQQ   R  S S   P+
Sbjct: 448 -------------QQEQQLNFRESSTSGAEPS 460

[Close]
BLAST of CmoCh18G006770 vs. TrEMBL
Match: F6HHD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00850 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-09
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1 

Query: 4   RCFNVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           R  NVDKD+VKAA++ QQDQ    ALLA+G+++SDL  TEKEIE+MVMEASRA YL
Sbjct: 373 RGVNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVMEASRAEYL 428

[Close]
BLAST of CmoCh18G006770 vs. TrEMBL
Match: A0A061GW20_THECC (OTU-like cysteine protease family protein OS=Theobroma cacao GN=TCM_041358 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-09
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           NVDKD+VKAA++ QQDQ    ALLA+G+++SDL  TEKEIE+MVMEASRA YL
Sbjct: 387 NVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVMEASRAEYL 439

[Close]
BLAST of CmoCh18G006770 vs. TAIR10
Match: AT2G27350.5 (AT2G27350.5 OTU-like cysteine protease family protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-10
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYLKLRGAGV 66
           +VDK++VKAA++ QQ+     ALLA+G+++SDL  TEKEIE+ VMEASRA YL       
Sbjct: 357 HVDKEQVKAAIKAQQEHQIDNALLAEGRFYSDLELTEKEIERSVMEASRAEYL------- 416

Query: 67  GVKVRWCKHPVGIRQEQQQEVRGDSISMCTPT 96
              + W K  +G ++         S     P+
Sbjct: 417 ---MEWSKPRIGPKESSTSNAETSSSGATGPS 438

[Close]
BLAST of CmoCh18G006770 vs. NCBI nr
Match: gi|778659493|ref|XP_011654529.1| (PREDICTED: OTU domain-containing protein 5-B [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-11
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           NVDKDKVKAAL+ QQDQ    ALLAQG+YFSDL  TEKEIEQMVMEASRA YL
Sbjct: 388 NVDKDKVKAALKAQQDQQLDNALLAQGRYFSDLEVTEKEIEQMVMEASRAEYL 440

[Close]
BLAST of CmoCh18G006770 vs. NCBI nr
Match: gi|659071632|ref|XP_008461136.1| (PREDICTED: OTU domain-containing protein 5-B [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-11
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           NVDKDKVKAAL+ QQDQ    ALLAQG+YFSDL  TEKEIEQMVMEASRA YL
Sbjct: 388 NVDKDKVKAALKAQQDQQLDNALLAQGRYFSDLEVTEKEIEQMVMEASRAEYL 440

[Close]
BLAST of CmoCh18G006770 vs. NCBI nr
Match: gi|902171904|gb|KNA08059.1| (hypothetical protein SOVF_166130 [Spinacia oleracea])

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-09
Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 1 

Query: 7   NVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYLKLRGAGV 66
           NVDKD+VKAA++ QQDQ    ALLA+G+++SDL  TEKEIE+ VMEASRA YL       
Sbjct: 363 NVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERTVMEASRAEYL------- 422

Query: 67  GVKVRWCKHPVGIRQEQQQEVRGDSISMCTPT 96
                      G + +Q   +RG S S+  P+
Sbjct: 423 ----------AGNKSKQHVGLRGSSTSIAEPS 437

[Close]
BLAST of CmoCh18G006770 vs. NCBI nr
Match: gi|225464886|ref|XP_002273209.1| (PREDICTED: OTU domain-containing protein 5 [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-09
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1 

Query: 4   RCFNVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           R  NVDKD+VKAA++ QQDQ    ALLA+G+++SDL  TEKEIE+MVMEASRA YL
Sbjct: 373 RGVNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVMEASRAEYL 428

[Close]
BLAST of CmoCh18G006770 vs. NCBI nr
Match: gi|296084879|emb|CBI28288.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-09
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1 

Query: 4   RCFNVDKDKVKAALEVQQDQP---ALLAQGQYFSDLVDTEKEIEQMVMEASRAGYL 57
           R  NVDKD+VKAA++ QQDQ    ALLA+G+++SDL  TEKEIE+MVMEASRA YL
Sbjct: 347 RGVNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVMEASRAEYL 402

The following BLAST results are available for this feature:
BLAST of CmoCh18G006770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh18G006770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVH3_CUCSA1.1e-1181.13Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166830 PE=4 SV=1[more]
A0A0K9QLD9_SPIOL1.7e-0946.74Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166130 PE=4 SV=1[more]
A0A0D9W4Q6_9ORYZ2.2e-0948.91Uncharacterized protein OS=Leersia perrieri PE=4 SV=1[more]
F6HHD7_VITVI2.2e-0967.86Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00850 PE=4 SV=... [more]
A0A061GW20_THECC2.9e-0969.81OTU-like cysteine protease family protein OS=Theobroma cacao GN=TCM_041358 PE=4 ... [more]
BLAST of CmoCh18G006770 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27350.51.4e-1040.22 OTU-like cysteine protease family protein[more]
BLAST of CmoCh18G006770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778659493|ref|XP_011654529.1|1.5e-1181.13PREDICTED: OTU domain-containing protein 5-B [Cucumis sativus][more]
gi|659071632|ref|XP_008461136.1|1.5e-1181.13PREDICTED: OTU domain-containing protein 5-B [Cucumis melo][more]
gi|902171904|gb|KNA08059.1|2.4e-0946.74hypothetical protein SOVF_166130 [Spinacia oleracea][more]
gi|225464886|ref|XP_002273209.1|3.2e-0967.86PREDICTED: OTU domain-containing protein 5 [Vitis vinifera][more]
gi|296084879|emb|CBI28288.3|3.2e-0967.86unnamed protein product [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009630 gravitropism
biological_process GO:0016578 histone deubiquitination
biological_process GO:0007346 regulation of mitotic cell cycle
biological_process GO:0016579 protein deubiquitination
cellular_component GO:0000785 chromatin
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0042393 histone binding
molecular_function GO:0031491 nucleosome binding
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G006770.1CmoCh18G006770.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G006770MELO3C004671.2Melon (DHL92) v3.6.1cmomedB400
CmoCh18G006770CsaV3_1G015050Cucumber (Chinese Long) v3cmocucB0460
CmoCh18G006770Cla97C01G011400Watermelon (97103) v2cmowmbB386
CmoCh18G006770Bhi08G000029Wax gourdcmowgoB0532
CmoCh18G006770CsGy1G014760Cucumber (Gy14) v2cgybcmoB085
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G006770Cucumber (Gy14) v1cgycmoB0883
CmoCh18G006770Cucurbita maxima (Rimu)cmacmoB410
CmoCh18G006770Wild cucumber (PI 183967)cmocpiB386
CmoCh18G006770Cucumber (Chinese Long) v2cmocuB383
CmoCh18G006770Watermelon (Charleston Gray)cmowcgB346
CmoCh18G006770Watermelon (97103) v1cmowmB376
CmoCh18G006770Watermelon (97103) v1cmowmB384
CmoCh18G006770Cucurbita pepo (Zucchini)cmocpeB374
CmoCh18G006770Silver-seed gourdcarcmoB0000