CmoCh18G006220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G006220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(BTB/POZ domain-containing protein) (Phototropic-responsive NPH3 family protein)
Location	Cmo_Chr18 : 7893389 .. 7899788 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCCGCCGCCGCTAATCGGCGAAGCTTTACACGTCTACGCTTGTCGGTGGCTTCCAGATATCTCAGCCCAAGAGAATTCAGCTAAGAATCGGCAAATCCTCGAGACCCTAATCAGCCTCATACCCCCAGATCAAGAATCAATATCAGTTAGCTTCTCGCTTCGGCTACTCAGCCTTGCAAATCTCTTGGGAGCCTCTTCAGCTACAAAAACAGAGGTTATAAGGCGATGCAGCGCCCTGTTGGAAGAGGCAACAGTGAGCGACTTACTTTTTGCTTCACATTCTGCCTCCAATGATGATGGTGGTGATGAGCATTGCCATGATGTTGATTTGGTTGTGGCTGTTTTAGAGAGCTTCTTAATGGCGTGGAGACGACAGTCGCCGGCGGCTGATGAAAATGCTCAGCTTTTGATATCTATTAGAAAAGTTGGGAAGCTCATTGACTCTTATCTCCAAGTGGTTGCTAGAGATCGAAACATGCCTGTTGCAAAGATGATTTATCTTGCTGAAGCTTTGCCCGACGTTGCCCGGCCGAATCACGATCATGTTTACAGAGCAATCAACATCTTTCTCAAGGTAAATACTACTGGCATATAAACTTGACTTAATAGAATAAGTCACTAACTTTCACTTACAGAGTAATTTTAGAAAAATTGTCGGTAGACTTAGTAGAATAAATTAGTAATTTATGAAACAACTATAGTAAAATTGGTAGTAGTTACTAAATTGTGGACCAAATTTTGTGGCGGTAGACTAAGTTTTATGTTTTAATTAAAAAGATCATTTATGTTTTAATTAAAAAGATCATGAGTGGTTCTTACCTTGGGAGAAAGTTTAGGAAGCTAGTTAGTGATTGTGAGTGGTTCTTACCTTGGGAGAAAGTTTAGGAAGCTAGTTAGTACTTTCTCCACTATACGTACTCATGAGATGTATGTTTTTTCATAACAAAGAAAATTGAAGAGCTAAATGCTTTTTTTTTTGTCCAAGAGATCTCTCCCTTCAAGGTATTCCTTTGTCTCTTTTATTTGTTTGACATAATTCCAATCAAGGGTCACATCCAATATTTGGTATCAGAGCATTTAAGATACCGAAACAAATCTCGTCACCATAAAAAGTCATCGAAGGAGAAGTGACAACAATAAAGAGCGGAAAGGAGGGGAGTGTAATGCTCAAGTACCTGTTACTCATGAAGAGTAACTACACAGCATGGTCGATAAAGGTGCGTGTCAACTTATAAGCACAAGGCATGTGGAACACCATTGACCATGGTGACGTTGAGGAGCATAAGGATAGAATGGCTCATGCCGCCATCTACCAAGCAGTCCCGGAGGACGTTCTTCTCATGTTGGAAGAGAAGGACTCGACAAAGGTAGCGTGGGAGACGCTGCAAACCATGCATGTGGGTGTGGAACGTGTCAAGGAAGCAAAGGTGCATACCTTGAAGAGTAAGTTTGAGGCTATTCCCATGAAGGACGGTGAGTCAATAGATGGCTTTACCATGAAGTTGATGACGATCGTTAGCGGCATCCGTTTATTAGGCAGCATGGTGGAAGAAATCTTCGTCGTCAAGAAGTTCCTTCGAGTTGTTCCCCCAAAATTCATGCAAATTGTTACCTCCATCGAGCAATTCGGTGACTTCAAGAACATATCAGATGAGGAGGTTGTTGGTCGTCTTAAGGTCCATGAAGAGAGACTTCGTGGTTATTAAGACAAATAGGAGGAGAAACACCTCTTACTCACATATGAGGAGTGGCTCGCTTAGACGAAAAGGAATGATGCAGTCGACTCTTCTTTTTCAAGTACGAGAGAACATGGCAACCATAACAAGGAAAACAGAGGTCGTGGACGTGGTCGTGGACATGGCTGAGGACGTGGTGGTAGAGGAGGTCGTGATAATACCTCACAAACCCATGACAATTCCAACCCTTGGAAGGACAAGAGTATGATCAAGATTTACTCTTGTGGAAAATATGGGCACTATGCAGTAGAGTACCGCAAGAAGAAGCGTGATGAGGAGGAAAACCTCACTCACGCAGGATCAAGAGCTTGCATTGATGTTGGCCGAGAAGATACCCAACCTGTTAATGCTCAACAAAGAGAAGGTTATGGAGAACCTTCTCACAAAAGAAGAAGACCGAGTGGAGACCAACATGTGGTACCTTGACAATGGAGCAAACAACCACATGGTCAGAGATCGAACTAAGTTCAAGGAGCTTGATGAGAAGCTCATTGAAAACGTAAAGTTTGACGATGGATCAATTGTACCGGTCCAAGAAAAATGATCCATCTTGTTCCAGTGCAAGAATGGTGACCAACGTTTACTGACCAAGGTATACTATATCCCAAACTTGAAGAGTAACATTATCAATCTTGGTCAAATGATGGAAGAAGGAAGCAGAGTGGAGTTAGCTGGCTCGTTCCTCAAGATATTCGACAGAAATGGAACCTTGTTGATGAAGGTAAAATGATCGCATAACCGCATGTACAGGATACTATTGGAGACCAATCAACCCACCTCTCTATTGACGAAACTTGCAGACCTAGCTTGGCTATGGCATGCAAGACTTGGGCACGTGAACTTTCAAACGCTTAAAATGATGGGAGAGAAGAAGATGGCTAGGGGCTACCCAAAATCATACACCCGAACTAGCTATGTGAAAGTTGCCAAGTCTCCAAACAAGCAAGACTGTCATTCCCATCTCAAACAAGTTCTCGTTCTAAGCGACCACTGCAACTGGTTCATGTAGATTTGTGTGGTTCGATCACCTCATCATTGATTGTTGGTAATAAGTATTCTCTCTTTTTTGTTCACGATTATAGTCGTTGGATGTGGGTGTACATGCTCAAAGAAAAAGGAGAAGCATTATGTGCGTTCAAGAAATTCAAAATACTAGTTGAAAGCGGGTATGATTAAAAGTTGAAAACCTTGCGCAGCGACTGAGGTGGCGAGTTCTTATCCCAAAACTTCTCAAAGTTTTATGAAGAGGAAGATATCAAGCGTCAACTCACTGTACCGTACACTTCACAACAAAACGGTGTGGTCGAACGAAGAAATCGCACCATAATGAACTCTGAAAGAAGCTTACTCAAGAGCATGCAAGTCTCGACAATTTTCTAGCGAAGCAATACGACATGTGGTTTATCTTCTAAATCATTTACCGACAAAGGCGCTAGACATTTGATGCCCCTACAAAGCATGGTTCGGTAAGATACCTCACTTCGAGTACCTAAGAGTTTTCGGTTGTACAACACATGTTAAGACTGCAAAGCCATATATAAAAAAGCTTGATGACAGGAGCCAAAAGATGGTGTACTTTGGCGTAGAGGATGGGACCAAGGCACACAGGTTGTATGATTTGCAACAGGAGAAAATTCATGTAAGTAGAGATGTCGTATTCGAAGAAGAGAAGAAGTGGGATTGGTGCAGCGTTGGCGATAACAAGCAGATTGTTATAGAGTTCATTACTCTGAAAGAAGAGAGACGCAACAGACCTAAAAAGTAACCCAACAGCAGCAACAACAACAACAAGTTCACACATGTTATTACCGGTGACACTGATTGGCATGATGGACTCTCTAGAACAAGAGAGCTCAGACGAGCGCATAGGAGGATCCACAATAGAGGATGAACCAAAGAAGTTTCGTTCTCTTGCTGAAATTTATGCGGACACACTTGAAGAAGAATTGGATCCCGATGAGTTAATGTTGCTTGCAGCCAAGGAGTCAACAACCTATCATGAGGCAACAACTGAGACGATGTGGCAGGAGACCATGCAAAAGGAGCTTGAACATTGAGAAGAACAAGACTTAGGCAAGAACAAGACTTAGGCACTAACTAACTTACCGTCTGGATACAAGCCCATTGGATTGATGTAGGTGTTTAAGTTGAAGAAGAATAATGAAGGAAACGTCATCAAGCATAAAGCAAGACTCGTGGCGAAGGGATACGTGCAACGACAAGGAGTTGATTTTGAGGAGGTTTTCGCGCTTGTGGCTAGACTAGACACTATAAGGTTTATTCTTGCCCTTGTAGCTCAACACGGGTGGGAAGTCCATCACTTGGACGTCAAATCAACATTCCTAAATGGTGACCTCCAAGAAGAAGTGTATGTTGTCCAACTTGAAGGGTTTGTCATCAAAGCCGAAGAGCACAAAGTGTACAAGTTGTCAAAGACCCTCTACGGTTTACGGCAAGTGCCGAGGGCGTGGAACATATGTTTGAACAAGAGCTTAAAGAGTCTAAACTTGATAAAGTGCTCACAAGAACAATCAGTGTATACAGGAAACGATGGGGCTGAAACACTCATAGTTGGTATGTACGTTGATAACCTGATCTTCACTTGTACAAGTGTGGAAGACGTTAAAGAGTTCAAGAAACAAATGATGAAAGAATTTGAAATGACTGATCTCAAGTTACTCACGTACTACCACAATATTGAAGTTGACCAAAGGATATATTGCATTATGCTAAAGCAATCAACCTATGCTAAGAAGTTGTTGCAGTAATTTAAGATGACAGAGTACAACCTGACCAAGTATCTCATGGAAGCAGAGTTACAACTCGGGAAAGATGTTGAAAGAAGTTTGGTGAATTCCGCTGAGTATAGGCGTGTCATCGAAAGTCTAAGGTACTTGACTCGTACTCATCCGGACCTTTCATATGCTATTGGAATAGTGAATGTAGAATAGTGAATAGGTGCATGGAAAAGCCCACTATGATGCATCATCAAGCGGTTAAGCACATTCTACGTGTGAAGGAAACCTCAAGCTACGGGTTGAAGTATCAAAGAAGGCGATGTCCTGAAGAACTAGTCAGTTTTACCGATAGTGATTTAGTAGGAGACATTGACGATAGAAAAAGCACGATACGAAGGACGTTTTATCTCAACGAAAATTGTAATCTCTTGGAAATCTCAGAAGCAGTGAACTAAGACACTATCTTCCTGTGCGGTCAAGTTCATGGCAACAACTACAGCGTCGTGGCAAGCATTGTAGTTGAGAAATTTGTTGAATGATGTGACTAGAAGTGAACTAAACCCAGTAACTCTCTACGTCGACAACAAATCTGCAATTGTACTGATGAAGAATCCAGTATTTCACTGACACAGCAAACACATTGATACTCGCTTCCACTTCATCGGTGAGTGTGTTAAGAAGAGACAAATGATTGTGAAGTTCGTATGCACTAGAAAACAACATGTTGATATTCTAACTAAGGCCCTAGCAAGAGTTAAGTTTGTAGAGATGCAGGAATTGCTAGGAGTGAAGAATCTTGAACAAAGTCAAGTTTACGGAGGAGATTGTGAGGTTATAAACTTGACTTAGCACTAACTTATAGAGTAACTTTAGGAGAATTGTTAGTACACTTAGTCGAATAAGTTACTAGCTTATGGAGCAACTACATGAGAATGGGTAGTAATTACCAAATCGTGGACCAAGTTTTGTGGTTGTGGACTAAGTTTTATGTTTTAATTAGGAAGATCGTTAGTGGTTGTTAACTTGAGGAGAAAGTTTAGGAAGCTAGCTTATTAGTGCTTTCTCCAACCTAAATACTCTTGAGAGGTATGTTTTTTCACAACAACAAAGAGAATTGAAAAGCTAAGTACTTCAATTTTTTTTTGCTCCAAAAGATCTCTCCCCTTAATATATTCCTTTGCCTCTTATACATGTTTCGACATAATTCCGATCGAGGATCACATCCAACAAACACTGTAGGAATGAATTGAGTGAATATTTCTATTTTTAATTTTTTAATTTTTTTTTTTTTTTTTTTGTTCATCCTTATCTCCGCTCCTAAATGCTTGGGGAACTTATTTGTTGTAGGAGCATCCATATCTAAGCAAAGCTGATAGAAAGAGATTATGTCGAGTTCTGAACTGCCAGAAGCTGTCGGCGGATGTACGTGCTCATGCAGTGAAGAACGAGCGGCTGCCACTAAGAACAGTTGTGCAAGTGTTGTTCTTTGAGCAAGAGAAAGGTAATTCCAAGACAAGTAGCCGCGTAGCAGCAGCCAGCGATGAGCTGAGATCACGGGCAGATGAAAAGTTGAGGAGATCAGCAAGCACAAGATCAAGGCACAAAGTTGCAGAAGCTGATAAAGATGAGATGAACACAAAACATTCACTTGAATCACGAAGGAATCCATAGTATAGAAAAGGGATTGAGATGCGCCATGATCTCCCTTGCATTTTCAGGGTTCATGCTGTTCTTTCTTTCATCTCTAATTGCTATAAAGGTTTGTACAGATAATTCAATCAATCCCCTCCTTTCCAACAGGATCTTCTCATATGTAATGTGTTTTTTTTTTCCTTTTTCGTCAGCTGGGTGTTGCCATAAGTGTGTTTATGAATAAGATTGATTTGCAAAAGGCTAACCTTGGCAAAGTTTAATGAGACGG

mRNA sequence

ATGCTGCCGCCGCCGCTAATCGGCGAAGCTTTACACGTCTACGCTTGTCGGTGGCTTCCAGATATCTCAGCCCAAGAGAATTCAGCTAAGAATCGGCAAATCCTCGAGACCCTAATCAGCCTCATACCCCCAGATCAAGAATCAATATCAGTTAGCTTCTCGCTTCGGCTACTCAGCCTTGCAAATCTCTTGGGAGCCTCTTCAGCTACAAAAACAGAGGTTATAAGGCGATGCAGCGCCCTGTTGGAAGAGGCAACAGTGAGCGACTTACTTTTTGCTTCACATTCTGCCTCCAATGATGATGGTGGTGATGAGCATTGCCATGATGTTGATTTGGTTGTGGCTGTTTTAGAGAGCTTCTTAATGGCGTGGAGACGACAGTCGCCGGCGGCTGATGAAAATGCTCAGCTTTTGATATCTATTAGAAAAGTTGGGAAGCTCATTGACTCTTATCTCCAAGTGGTTGCTAGAGATCGAAACATGCCTGTTGCAAAGATGATTTATCTTGCTGAAGCTTTGCCCGACGAGCATCCATATCTAAGCAAAGCTGATAGAAAGAGATTATGTCGAGTTCTGAACTGCCAGAAGCTGTCGGCGGATGTACGTGCTCATGCAGTGAAGAACGAGCGGCTGCCACTAAGAACAGTTGTGCAAGTGTTGTTCTTTGAGCAAGAGAAAGGTAATTCCAAGACAAGTAGCCGCGTAGCAGCAGCCAGCGATGAGCTGAGATCACGGGCAGATGAAAAGTTGAGGAGATCAGCAAGCACAAGATCAAGGCACAAAGTTGCAGAAGCTGATAAAGATGAGATGAACACAAAACATTCACTTGAATCACGAAGGAATCCATAGTATAGAAAAGGGATTGAGATGCGCCATGATCTCCCTTGCATTTTCAGGGTTCATGCTGTTCTTTCTTTCATCTCTAATTGCTATAAAGGTTTGTACAGATAATTCAATCAATCCCCTCCTTTCCAACAGGATCTTCTCATATGTAATGTGTTTTTTTTTTCCTTTTTCGTCAGCTGGGTGTTGCCATAAGTGTGTTTATGAATAAGATTGATTTGCAAAAGGCTAACCTTGGCAAAGTTTAATGAGACGG

Coding sequence (CDS)

ATGCTGCCGCCGCCGCTAATCGGCGAAGCTTTACACGTCTACGCTTGTCGGTGGCTTCCAGATATCTCAGCCCAAGAGAATTCAGCTAAGAATCGGCAAATCCTCGAGACCCTAATCAGCCTCATACCCCCAGATCAAGAATCAATATCAGTTAGCTTCTCGCTTCGGCTACTCAGCCTTGCAAATCTCTTGGGAGCCTCTTCAGCTACAAAAACAGAGGTTATAAGGCGATGCAGCGCCCTGTTGGAAGAGGCAACAGTGAGCGACTTACTTTTTGCTTCACATTCTGCCTCCAATGATGATGGTGGTGATGAGCATTGCCATGATGTTGATTTGGTTGTGGCTGTTTTAGAGAGCTTCTTAATGGCGTGGAGACGACAGTCGCCGGCGGCTGATGAAAATGCTCAGCTTTTGATATCTATTAGAAAAGTTGGGAAGCTCATTGACTCTTATCTCCAAGTGGTTGCTAGAGATCGAAACATGCCTGTTGCAAAGATGATTTATCTTGCTGAAGCTTTGCCCGACGAGCATCCATATCTAAGCAAAGCTGATAGAAAGAGATTATGTCGAGTTCTGAACTGCCAGAAGCTGTCGGCGGATGTACGTGCTCATGCAGTGAAGAACGAGCGGCTGCCACTAAGAACAGTTGTGCAAGTGTTGTTCTTTGAGCAAGAGAAAGGTAATTCCAAGACAAGTAGCCGCGTAGCAGCAGCCAGCGATGAGCTGAGATCACGGGCAGATGAAAAGTTGAGGAGATCAGCAAGCACAAGATCAAGGCACAAAGTTGCAGAAGCTGATAAAGATGAGATGAACACAAAACATTCACTTGAATCACGAAGGAATCCATAG

Homology

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BLAST of CmoCh18G006220 vs. Swiss-Prot
Match: Y5780_ARATH (BTB/POZ domain-containing protein At5g47800 OS=Arabidopsis thaliana GN=At5g47800 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.8e-66
Identity = 149/278 (53.60%), Postives = 187/278 (67.27%), Query Frame = 1


Query: 2   LPPPLIGEALHVYACRWLP--------DISAQENSA---KNRQILETLISLIPPDQESIS 61
           LPP LIGEALHVY CRWLP          S +EN A   ++R+++ T++++IP D+ S+S
Sbjct: 226 LPPQLIGEALHVYTCRWLPYFKSNSHSGFSVKENEAALERHRRLVNTVVNMIPADKGSVS 285

Query: 62  VSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHDV 121
             F LRL+S+A+ + AS  TKTE+IR+ S  LEEAT+ DLL  SHS+S+      H +D 
Sbjct: 286 EGFLLRLVSIASYVRASLTTKTELIRKSSLQLEEATLEDLLLPSHSSSH-----LHRYDT 345

Query: 122 DLVVAVLESFLMAWRRQSPA--ADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIY 181
           DLV  VLESFLM WRRQS A  +  N QLL SIRKV KLIDSYLQ VA+D +MPV+K + 
Sbjct: 346 DLVATVLESFLMLWRRQSSAHLSSNNTQLLHSIRKVAKLIDSYLQAVAQDVHMPVSKFVS 405

Query: 182 LAEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNER 241
           L+EA+PD                   HP +SK ++KRLCR L+CQKLSA VRAHAVKNER
Sbjct: 406 LSEAVPDIARQSHDRLYKAINIFLKVHPEISKEEKKRLCRSLDCQKLSAQVRAHAVKNER 465

Query: 242 LPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADE 249
           +PLRTVVQ LFF+QE G+   SSR  + S EL +R  E
Sbjct: 466 MPLRTVVQALFFDQESGSKGASSR--SESQELFTRGKE 496

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BLAST of CmoCh18G006220 vs. Swiss-Prot
Match: Y1790_ARATH (BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana GN=At1g67900 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.7e-42
Identity = 112/295 (37.97%), Postives = 163/295 (55.25%), Query Frame = 1


Query: 2   LPPPLIGEALHVYACRWLPDI----------------SAQENSAKNRQILETLISLIPPD 61
           +P  LIG+AL VYA +WLP +                S  + S+K+R +LE++ISL+P +
Sbjct: 227 VPASLIGDALRVYASKWLPTLQRNRKVVKKKEDSDSDSDTDTSSKHRLLLESIISLLPAE 286

Query: 62  QESISVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDE 121
           + ++S SF L+LL  AN+L AS+++K E+ RR +  LEEATVSDLL    S  +     E
Sbjct: 287 KGAVSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKS-----E 346

Query: 122 HCHDVDLVVAVLESFL-----------------MAWRRQSPAADENAQLLI--------- 181
             +DVD+V  +LE F+                 M  RR+   + EN  L           
Sbjct: 347 LLYDVDIVATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSA 406

Query: 182 ---SIRKVGKLIDSYLQVVARDRNMPVAKMIYLAEALPD------------------EHP 234
              S  KV KL+D YLQ +ARD N+P++K + LAE++P+                   H 
Sbjct: 407 SHSSKLKVAKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHK 466

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BLAST of CmoCh18G006220 vs. Swiss-Prot
Match: Y3649_ARATH (BTB/POZ domain-containing protein At3g26490 OS=Arabidopsis thaliana GN=At3g26490 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35
Identity = 107/319 (33.54%), Postives = 167/319 (52.35%), Query Frame = 1


Query: 2   LPPPLIGEALHVYACRWLPDISAQENSAKNRQILETLISLIPPDQESISVSFSLRLLSLA 61
           + P LIG AL +YA +WLP I  QE+SA +  +LE++ISL+P ++ S+  SF L+LL +A
Sbjct: 246 ISPRLIGNALRIYASKWLPSI--QESSADSNLVLESVISLLPEEKSSVPCSFLLQLLKMA 305

Query: 62  NLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHDVDLVVAVLESFL 121
           N++  S ++K E+  +    L++ATVS+LL      S         +DVD+V  +++ FL
Sbjct: 306 NVMNVSHSSKMELAIKAGNQLDKATVSELLIPLSDKSG------MLYDVDVVKMMVKQFL 365

Query: 122 -------------MAWRRQSPAADENAQLLISIR--------------KVGKLIDSYLQV 181
                           RR     + N + +  +R              KV KL+DSYLQ 
Sbjct: 366 SHISPEIRPTRTRTEHRRSRSEENINLEEIQEVRGSLSTSSSPPPLLSKVAKLVDSYLQE 425

Query: 182 VARDRNMPVAKMIYLAEALPDE------------------HPYLSKADRKRLCRVLNCQK 241
           +ARD N+ V+K + LAE +PD                   H  + K +RKRLCR+L+C+K
Sbjct: 426 IARDVNLTVSKFVELAETIPDTSRICHDDLYNAIDVYLQVHKKIEKCERKRLCRILDCKK 485

Query: 242 LSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKLRRSAST 276
           LS +    A +NE LPLR +VQ+LF EQ +      + +A   + + +     L+RS +T
Sbjct: 486 LSVEASKKAAQNELLPLRVIVQILFVEQAR------ATLATTRNNITTNETAVLKRSFTT 545

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BLAST of CmoCh18G006220 vs. Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-35
Identity = 100/237 (42.19%), Postives = 134/237 (56.54%), Query Frame = 1


Query: 32  RQILETLISLIPPDQESISVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLL 91
           R I+E+LIS+IPP ++S++ SF LRLL  AN+L  + A  TE+ +R     E+AT+ DLL
Sbjct: 374 RMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLL 433

Query: 92  FASHSASNDDGGDEHCHDVDLVVAVLESFLMAWR-------RQSPAADENAQLLI----- 151
              +   N+ G  E  +DVDLV  +LE FL+  +       R SP+  ++    I     
Sbjct: 434 IPGY---NNKG--ETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNN 493

Query: 152 ------------SIRKVGKLIDSYLQVVARDRNMPVAKMIYLAEALPDE----------- 211
                       +  +V +L+DSYL  VARDRN+P+ K   LAEALP+            
Sbjct: 494 NNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRA 553

Query: 212 -------HPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEK 227
                  HP LS+ +RKRLCRV++CQKLS D   HA +NERLPLR VVQVLF EQ K
Sbjct: 554 IDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVK 605

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BLAST of CmoCh18G006220 vs. Swiss-Prot
Match: NPY2_ARATH (BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 99/311 (31.83%), Postives = 160/311 (51.45%), Query Frame = 1


Query: 6   LIGEALHVYACRWLPD----ISAQENSAKNRQILETLISLIPPDQESISVSFSLRLLSLA 65
           +IGEAL  Y  R L      +  Q +  K++ I+ETL+ L+P ++ S+S  F L+LL   
Sbjct: 238 VIGEALKAYGYRRLSGFNKGVMEQGDLVKHKTIIETLVWLLPAEKNSVSCGFLLKLLKAV 297

Query: 66  NLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHDVDLVVAVLESFL 125
            ++ +    K +++RR    LEEA++++LL  SH       G E  +DVDLV  ++  F+
Sbjct: 298 TMVNSGEVVKEQLVRRIGQQLEEASMAELLIKSHQ------GSETLYDVDLVQKIVMEFM 357

Query: 126 MAWRRQSPAA--DENAQLLISIRK------------VGKLIDSYLQVVARDRNMPVAKMI 185
              +        DE+   +  +RK            V K+IDSYL  +A+D N+P +K I
Sbjct: 358 RRDKNSEIEVQDDEDGFEVQEVRKLPGILSEASKLMVAKVIDSYLTEIAKDPNLPASKFI 417

Query: 186 YLAEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNE 245
            +AE++                    EHP ++K ++KR+C++++C+KLS +   HAV+N+
Sbjct: 418 DVAESVTSIPRPAHDALYRAIDMFLKEHPGITKGEKKRMCKLMDCRKLSVEACMHAVQND 477

Query: 246 RLPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKLRRSASTRSRHKVAEADKDE 281
           RLPLR VVQVLFFEQ +  + + S    ++ +L      +LR   +  S   V    +DE
Sbjct: 478 RLPLRVVVQVLFFEQVRAAASSGS----STPDLPRGMGRELRSCGTYGSSRSVPTVMEDE 537

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BLAST of CmoCh18G006220 vs. TrEMBL
Match: A0A0A0LYE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170000 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 191/333 (57.36%), Postives = 221/333 (66.37%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDI----SAQENSAKNRQILETLISLIPPDQESISVSFSLR 60
           +LPPPLIGEALHVY CRWL D+    S  +N  KNRQI+ET+ISLIPPD+ES+SVSFSLR
Sbjct: 230 ILPPPLIGEALHVYTCRWLSDVVRDTSTSDNVEKNRQIIETIISLIPPDRESVSVSFSLR 289

Query: 61  LLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGD--EHCHDVDLVV 120
           L SLAN+LGAS  TK E+IRRCS LLEEATV DLLF+++    DD G   +   DVDLVV
Sbjct: 290 LHSLANVLGASQVTKAEIIRRCSLLLEEATVKDLLFSNYVPKVDDNGQCLKVDDDVDLVV 349

Query: 121 AVLESFLMAWRRQSPAAD---ENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYLAE 180
            VLES+LM WRR + + D   EN QLL SIRKVGKLID YLQVV RDR M +AKMI +AE
Sbjct: 350 GVLESYLMMWRRNNNSDDDHVENEQLLRSIRKVGKLIDCYLQVVGRDRKMSLAKMICVAE 409

Query: 181 ALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPL 240
           ALPD                  EHP +SKA++KRLCRVLNCQKLS ++R+HAVKNERLPL
Sbjct: 410 ALPDLARPSHDHIYKAINIFLKEHPDISKAEKKRLCRVLNCQKLSPELRSHAVKNERLPL 469

Query: 241 RTVVQVLFFEQEKGNSKTSSRVAAA--------SDELRSRADE--------------KLR 281
           RTVVQVLFFEQE   SKTS +             DE+RS   E              KLR
Sbjct: 470 RTVVQVLFFEQEMKGSKTSRQGVVEGTLEEDEWQDEMRSEPKERPGSGDPMRPWTQQKLR 529

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BLAST of CmoCh18G006220 vs. TrEMBL
Match: B9IH34_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00530g PE=4 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 1.4e-75
Identity = 163/277 (58.84%), Postives = 204/277 (73.65%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPD----------ISAQENSAKN-RQILETLISLIPPDQESI 60
           MLPP LIGEALHVYACRWLPD          +S  ++ A+N R+I+E ++++IP D+ S+
Sbjct: 224 MLPPQLIGEALHVYACRWLPDATKITPPESSVSQTDDVAENHRKIIEIIVTMIPADKGSV 283

Query: 61  SVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHD 120
           SV F LRLLS+A+ LGAS+ TKTE+IRR S  LEEATVSDLLF +HS+SN     +H +D
Sbjct: 284 SVGFLLRLLSIASHLGASTVTKTELIRRSSLQLEEATVSDLLFPTHSSSN-----QHYYD 343

Query: 121 VDLVVAVLESFLMAWRRQSPAADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYL 180
           +DLV AVL+SFL+ WRR SPA  EN+Q + SIRKVGKLID+YLQVVARD N+PV+K++ +
Sbjct: 344 IDLVAAVLDSFLLLWRRTSPAPIENSQSMRSIRKVGKLIDTYLQVVARDINLPVSKVLSV 403

Query: 181 AEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERL 240
           AEALPD                  EHP LSKAD+KRLCR L+CQKLS +VR HAVKNERL
Sbjct: 404 AEALPDIARKDHDDLYKGINIYLKEHPELSKADKKRLCRPLDCQKLSPEVRTHAVKNERL 463

Query: 241 PLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADE 249
           PLRTVVQVLFFEQ+KG+     R+ +A ++L SR  +
Sbjct: 464 PLRTVVQVLFFEQDKGSRANDQRM-SAQEQLLSRGKQ 494

[Close]

BLAST of CmoCh18G006220 vs. TrEMBL
Match: A0A061GGM0_THECC (Root phototropism protein, putative isoform 2 OS=Theobroma cacao GN=TCM_030464 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 166/311 (53.38%), Postives = 213/311 (68.49%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDIS-----------AQENSAKNRQILETLISLIPPDQESI 60
           MLPP L+GEALHVYACRWLPD +            +E+  K+R+ILE ++S+IP D+ S+
Sbjct: 227 MLPPQLVGEALHVYACRWLPDTTKSRPPQSSGSLTEESMKKSRRILEFIVSMIPADRGSV 286

Query: 61  SVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHD 120
           SV F LRLLS+AN LGAS  TKTE+IR+     EEATV D+L  S  +S     D+H +D
Sbjct: 287 SVGFLLRLLSIANYLGASPVTKTELIRKAGLQFEEATVGDMLLPSQLSS-----DQHYYD 346

Query: 121 VDLVVAVLESFLMAWRRQSPAADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYL 180
           +DLV AVLES+L+ WRRQSPA+ EN+ LL S+RK+GKLIDSYLQVVARD NMP++K++YL
Sbjct: 347 IDLVSAVLESYLVLWRRQSPASAENSHLLRSVRKIGKLIDSYLQVVARDVNMPISKLVYL 406

Query: 181 AEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERL 240
           AEALPD                  EHP LSKA++K LCR+L+CQKLS ++RAHAVKNERL
Sbjct: 407 AEALPDSARGDHDGLYKAINIYLKEHPDLSKAEKKSLCRMLDCQKLSPEIRAHAVKNERL 466

Query: 241 PLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKL--RRSASTRSRHKVAEADKDE 280
           PLRTVVQVLFFEQE G+  T  +    S   +++A E+   +     R R+ V E+ + E
Sbjct: 467 PLRTVVQVLFFEQESGSRATGHKPELISKARQTQATEEEGDKPQQEARRRNTVPESSERE 526

[Close]

BLAST of CmoCh18G006220 vs. TrEMBL
Match: A0A061GPH2_THECC (Root phototropism protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030464 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 166/311 (53.38%), Postives = 213/311 (68.49%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDIS-----------AQENSAKNRQILETLISLIPPDQESI 60
           MLPP L+GEALHVYACRWLPD +            +E+  K+R+ILE ++S+IP D+ S+
Sbjct: 225 MLPPQLVGEALHVYACRWLPDTTKSRPPQSSGSLTEESMKKSRRILEFIVSMIPADRGSV 284

Query: 61  SVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHD 120
           SV F LRLLS+AN LGAS  TKTE+IR+     EEATV D+L  S  +S     D+H +D
Sbjct: 285 SVGFLLRLLSIANYLGASPVTKTELIRKAGLQFEEATVGDMLLPSQLSS-----DQHYYD 344

Query: 121 VDLVVAVLESFLMAWRRQSPAADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYL 180
           +DLV AVLES+L+ WRRQSPA+ EN+ LL S+RK+GKLIDSYLQVVARD NMP++K++YL
Sbjct: 345 IDLVSAVLESYLVLWRRQSPASAENSHLLRSVRKIGKLIDSYLQVVARDVNMPISKLVYL 404

Query: 181 AEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERL 240
           AEALPD                  EHP LSKA++K LCR+L+CQKLS ++RAHAVKNERL
Sbjct: 405 AEALPDSARGDHDGLYKAINIYLKEHPDLSKAEKKSLCRMLDCQKLSPEIRAHAVKNERL 464

Query: 241 PLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKL--RRSASTRSRHKVAEADKDE 280
           PLRTVVQVLFFEQE G+  T  +    S   +++A E+   +     R R+ V E+ + E
Sbjct: 465 PLRTVVQVLFFEQESGSRATGHKPELISKARQTQATEEEGDKPQQEARRRNTVPESSERE 524

[Close]

BLAST of CmoCh18G006220 vs. TrEMBL
Match: A0A061GHJ0_THECC (Root phototropism protein, putative isoform 3 OS=Theobroma cacao GN=TCM_030464 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 166/311 (53.38%), Postives = 213/311 (68.49%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDIS-----------AQENSAKNRQILETLISLIPPDQESI 60
           MLPP L+GEALHVYACRWLPD +            +E+  K+R+ILE ++S+IP D+ S+
Sbjct: 226 MLPPQLVGEALHVYACRWLPDTTKSRPPQSSGSLTEESMKKSRRILEFIVSMIPADRGSV 285

Query: 61  SVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHD 120
           SV F LRLLS+AN LGAS  TKTE+IR+     EEATV D+L  S  +S     D+H +D
Sbjct: 286 SVGFLLRLLSIANYLGASPVTKTELIRKAGLQFEEATVGDMLLPSQLSS-----DQHYYD 345

Query: 121 VDLVVAVLESFLMAWRRQSPAADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYL 180
           +DLV AVLES+L+ WRRQSPA+ EN+ LL S+RK+GKLIDSYLQVVARD NMP++K++YL
Sbjct: 346 IDLVSAVLESYLVLWRRQSPASAENSHLLRSVRKIGKLIDSYLQVVARDVNMPISKLVYL 405

Query: 181 AEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERL 240
           AEALPD                  EHP LSKA++K LCR+L+CQKLS ++RAHAVKNERL
Sbjct: 406 AEALPDSARGDHDGLYKAINIYLKEHPDLSKAEKKSLCRMLDCQKLSPEIRAHAVKNERL 465

Query: 241 PLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKL--RRSASTRSRHKVAEADKDE 280
           PLRTVVQVLFFEQE G+  T  +    S   +++A E+   +     R R+ V E+ + E
Sbjct: 466 PLRTVVQVLFFEQESGSRATGHKPELISKARQTQATEEEGDKPQQEARRRNTVPESSERE 525

[Close]

BLAST of CmoCh18G006220 vs. TAIR10
Match: AT5G47800.1 (AT5G47800.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.7e-67
Identity = 149/278 (53.60%), Postives = 187/278 (67.27%), Query Frame = 1


Query: 2   LPPPLIGEALHVYACRWLP--------DISAQENSA---KNRQILETLISLIPPDQESIS 61
           LPP LIGEALHVY CRWLP          S +EN A   ++R+++ T++++IP D+ S+S
Sbjct: 226 LPPQLIGEALHVYTCRWLPYFKSNSHSGFSVKENEAALERHRRLVNTVVNMIPADKGSVS 285

Query: 62  VSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHDV 121
             F LRL+S+A+ + AS  TKTE+IR+ S  LEEAT+ DLL  SHS+S+      H +D 
Sbjct: 286 EGFLLRLVSIASYVRASLTTKTELIRKSSLQLEEATLEDLLLPSHSSSH-----LHRYDT 345

Query: 122 DLVVAVLESFLMAWRRQSPA--ADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIY 181
           DLV  VLESFLM WRRQS A  +  N QLL SIRKV KLIDSYLQ VA+D +MPV+K + 
Sbjct: 346 DLVATVLESFLMLWRRQSSAHLSSNNTQLLHSIRKVAKLIDSYLQAVAQDVHMPVSKFVS 405

Query: 182 LAEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNER 241
           L+EA+PD                   HP +SK ++KRLCR L+CQKLSA VRAHAVKNER
Sbjct: 406 LSEAVPDIARQSHDRLYKAINIFLKVHPEISKEEKKRLCRSLDCQKLSAQVRAHAVKNER 465

Query: 242 LPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADE 249
           +PLRTVVQ LFF+QE G+   SSR  + S EL +R  E
Sbjct: 466 MPLRTVVQALFFDQESGSKGASSR--SESQELFTRGKE 496

[Close]

BLAST of CmoCh18G006220 vs. TAIR10
Match: AT1G67900.1 (AT1G67900.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 112/295 (37.97%), Postives = 163/295 (55.25%), Query Frame = 1


Query: 2   LPPPLIGEALHVYACRWLPDI----------------SAQENSAKNRQILETLISLIPPD 61
           +P  LIG+AL VYA +WLP +                S  + S+K+R +LE++ISL+P +
Sbjct: 227 VPASLIGDALRVYASKWLPTLQRNRKVVKKKEDSDSDSDTDTSSKHRLLLESIISLLPAE 286

Query: 62  QESISVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDE 121
           + ++S SF L+LL  AN+L AS+++K E+ RR +  LEEATVSDLL    S  +     E
Sbjct: 287 KGAVSCSFLLKLLKAANILNASTSSKMELARRVALQLEEATVSDLLIPPMSYKS-----E 346

Query: 122 HCHDVDLVVAVLESFL-----------------MAWRRQSPAADENAQLLI--------- 181
             +DVD+V  +LE F+                 M  RR+   + EN  L           
Sbjct: 347 LLYDVDIVATILEQFMVQGQTSPPTSPLRGKKGMMDRRRRSRSAENIDLEFQESRRSSSA 406

Query: 182 ---SIRKVGKLIDSYLQVVARDRNMPVAKMIYLAEALPD------------------EHP 234
              S  KV KL+D YLQ +ARD N+P++K + LAE++P+                   H 
Sbjct: 407 SHSSKLKVAKLVDGYLQQIARDVNLPLSKFVTLAESVPEFSRLDHDDLYRAIDIYLKAHK 466

[Close]

BLAST of CmoCh18G006220 vs. TAIR10
Match: AT3G26490.1 (AT3G26490.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-37
Identity = 107/319 (33.54%), Postives = 167/319 (52.35%), Query Frame = 1


Query: 2   LPPPLIGEALHVYACRWLPDISAQENSAKNRQILETLISLIPPDQESISVSFSLRLLSLA 61
           + P LIG AL +YA +WLP I  QE+SA +  +LE++ISL+P ++ S+  SF L+LL +A
Sbjct: 246 ISPRLIGNALRIYASKWLPSI--QESSADSNLVLESVISLLPEEKSSVPCSFLLQLLKMA 305

Query: 62  NLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHDVDLVVAVLESFL 121
           N++  S ++K E+  +    L++ATVS+LL      S         +DVD+V  +++ FL
Sbjct: 306 NVMNVSHSSKMELAIKAGNQLDKATVSELLIPLSDKSG------MLYDVDVVKMMVKQFL 365

Query: 122 -------------MAWRRQSPAADENAQLLISIR--------------KVGKLIDSYLQV 181
                           RR     + N + +  +R              KV KL+DSYLQ 
Sbjct: 366 SHISPEIRPTRTRTEHRRSRSEENINLEEIQEVRGSLSTSSSPPPLLSKVAKLVDSYLQE 425

Query: 182 VARDRNMPVAKMIYLAEALPDE------------------HPYLSKADRKRLCRVLNCQK 241
           +ARD N+ V+K + LAE +PD                   H  + K +RKRLCR+L+C+K
Sbjct: 426 IARDVNLTVSKFVELAETIPDTSRICHDDLYNAIDVYLQVHKKIEKCERKRLCRILDCKK 485

Query: 242 LSADVRAHAVKNERLPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKLRRSAST 276
           LS +    A +NE LPLR +VQ+LF EQ +      + +A   + + +     L+RS +T
Sbjct: 486 LSVEASKKAAQNELLPLRVIVQILFVEQAR------ATLATTRNNITTNETAVLKRSFTT 545

[Close]

BLAST of CmoCh18G006220 vs. TAIR10
Match: AT5G64330.1 (AT5G64330.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 100/237 (42.19%), Postives = 134/237 (56.54%), Query Frame = 1


Query: 32  RQILETLISLIPPDQESISVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLL 91
           R I+E+LIS+IPP ++S++ SF LRLL  AN+L  + A  TE+ +R     E+AT+ DLL
Sbjct: 374 RMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDLL 433

Query: 92  FASHSASNDDGGDEHCHDVDLVVAVLESFLMAWR-------RQSPAADENAQLLI----- 151
              +   N+ G  E  +DVDLV  +LE FL+  +       R SP+  ++    I     
Sbjct: 434 IPGY---NNKG--ETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNN 493

Query: 152 ------------SIRKVGKLIDSYLQVVARDRNMPVAKMIYLAEALPDE----------- 211
                       +  +V +L+DSYL  VARDRN+P+ K   LAEALP+            
Sbjct: 494 NNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRA 553

Query: 212 -------HPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTVVQVLFFEQEK 227
                  HP LS+ +RKRLCRV++CQKLS D   HA +NERLPLR VVQVLF EQ K
Sbjct: 554 IDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVK 605

[Close]

BLAST of CmoCh18G006220 vs. TAIR10
Match: AT2G14820.1 (AT2G14820.1 Phototropic-responsive NPH3 family protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33
Identity = 99/311 (31.83%), Postives = 160/311 (51.45%), Query Frame = 1


Query: 6   LIGEALHVYACRWLPD----ISAQENSAKNRQILETLISLIPPDQESISVSFSLRLLSLA 65
           +IGEAL  Y  R L      +  Q +  K++ I+ETL+ L+P ++ S+S  F L+LL   
Sbjct: 238 VIGEALKAYGYRRLSGFNKGVMEQGDLVKHKTIIETLVWLLPAEKNSVSCGFLLKLLKAV 297

Query: 66  NLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHDVDLVVAVLESFL 125
            ++ +    K +++RR    LEEA++++LL  SH       G E  +DVDLV  ++  F+
Sbjct: 298 TMVNSGEVVKEQLVRRIGQQLEEASMAELLIKSHQ------GSETLYDVDLVQKIVMEFM 357

Query: 126 MAWRRQSPAA--DENAQLLISIRK------------VGKLIDSYLQVVARDRNMPVAKMI 185
              +        DE+   +  +RK            V K+IDSYL  +A+D N+P +K I
Sbjct: 358 RRDKNSEIEVQDDEDGFEVQEVRKLPGILSEASKLMVAKVIDSYLTEIAKDPNLPASKFI 417

Query: 186 YLAEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNE 245
            +AE++                    EHP ++K ++KR+C++++C+KLS +   HAV+N+
Sbjct: 418 DVAESVTSIPRPAHDALYRAIDMFLKEHPGITKGEKKRMCKLMDCRKLSVEACMHAVQND 477

Query: 246 RLPLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADEKLRRSASTRSRHKVAEADKDE 281
           RLPLR VVQVLFFEQ +  + + S    ++ +L      +LR   +  S   V    +DE
Sbjct: 478 RLPLRVVVQVLFFEQVRAAASSGS----STPDLPRGMGRELRSCGTYGSSRSVPTVMEDE 537

[Close]

BLAST of CmoCh18G006220 vs. NCBI nr
Match: gi|449443660|ref|XP_004139595.1| (PREDICTED: BTB/POZ domain-containing protein At5g47800 isoform X2 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80
Identity = 191/333 (57.36%), Postives = 221/333 (66.37%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDI----SAQENSAKNRQILETLISLIPPDQESISVSFSLR 60
           +LPPPLIGEALHVY CRWL D+    S  +N  KNRQI+ET+ISLIPPD+ES+SVSFSLR
Sbjct: 230 ILPPPLIGEALHVYTCRWLSDVVRDTSTSDNVEKNRQIIETIISLIPPDRESVSVSFSLR 289

Query: 61  LLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGD--EHCHDVDLVV 120
           L SLAN+LGAS  TK E+IRRCS LLEEATV DLLF+++    DD G   +   DVDLVV
Sbjct: 290 LHSLANVLGASQVTKAEIIRRCSLLLEEATVKDLLFSNYVPKVDDNGQCLKVDDDVDLVV 349

Query: 121 AVLESFLMAWRRQSPAAD---ENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYLAE 180
            VLES+LM WRR + + D   EN QLL SIRKVGKLID YLQVV RDR M +AKMI +AE
Sbjct: 350 GVLESYLMMWRRNNNSDDDHVENEQLLRSIRKVGKLIDCYLQVVGRDRKMSLAKMICVAE 409

Query: 181 ALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPL 240
           ALPD                  EHP +SKA++KRLCRVLNCQKLS ++R+HAVKNERLPL
Sbjct: 410 ALPDLARPSHDHIYKAINIFLKEHPDISKAEKKRLCRVLNCQKLSPELRSHAVKNERLPL 469

Query: 241 RTVVQVLFFEQEKGNSKTSSRVAAA--------SDELRSRADE--------------KLR 281
           RTVVQVLFFEQE   SKTS +             DE+RS   E              KLR
Sbjct: 470 RTVVQVLFFEQEMKGSKTSRQGVVEGTLEEDEWQDEMRSEPKERPGSGDPMRPWTQQKLR 529

[Close]

BLAST of CmoCh18G006220 vs. NCBI nr
Match: gi|778659535|ref|XP_011654640.1| (PREDICTED: BTB/POZ domain-containing protein At5g47800 isoform X1 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80
Identity = 191/333 (57.36%), Postives = 221/333 (66.37%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDI----SAQENSAKNRQILETLISLIPPDQESISVSFSLR 60
           +LPPPLIGEALHVY CRWL D+    S  +N  KNRQI+ET+ISLIPPD+ES+SVSFSLR
Sbjct: 232 ILPPPLIGEALHVYTCRWLSDVVRDTSTSDNVEKNRQIIETIISLIPPDRESVSVSFSLR 291

Query: 61  LLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGD--EHCHDVDLVV 120
           L SLAN+LGAS  TK E+IRRCS LLEEATV DLLF+++    DD G   +   DVDLVV
Sbjct: 292 LHSLANVLGASQVTKAEIIRRCSLLLEEATVKDLLFSNYVPKVDDNGQCLKVDDDVDLVV 351

Query: 121 AVLESFLMAWRRQSPAAD---ENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYLAE 180
            VLES+LM WRR + + D   EN QLL SIRKVGKLID YLQVV RDR M +AKMI +AE
Sbjct: 352 GVLESYLMMWRRNNNSDDDHVENEQLLRSIRKVGKLIDCYLQVVGRDRKMSLAKMICVAE 411

Query: 181 ALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPL 240
           ALPD                  EHP +SKA++KRLCRVLNCQKLS ++R+HAVKNERLPL
Sbjct: 412 ALPDLARPSHDHIYKAINIFLKEHPDISKAEKKRLCRVLNCQKLSPELRSHAVKNERLPL 471

Query: 241 RTVVQVLFFEQEKGNSKTSSRVAAA--------SDELRSRADE--------------KLR 281
           RTVVQVLFFEQE   SKTS +             DE+RS   E              KLR
Sbjct: 472 RTVVQVLFFEQEMKGSKTSRQGVVEGTLEEDEWQDEMRSEPKERPGSGDPMRPWTQQKLR 531

[Close]

BLAST of CmoCh18G006220 vs. NCBI nr
Match: gi|659118082|ref|XP_008458941.1| (PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At5g47800-like [Cucumis melo])

HSP 1 Score: 307.4 bits (786), Expect = 2.6e-80
Identity = 187/328 (57.01%), Postives = 220/328 (67.07%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPDI---SAQENSAKNRQILETLISLIPPDQESISVSFSLRL 60
           +LPPPLIGEALHVY CRWL D+   S  +N  KNRQI+ET+I LIPPD+ES+SVSFSLR+
Sbjct: 232 ILPPPLIGEALHVYTCRWLSDVRGRSTSDNVEKNRQIIETIIGLIPPDRESVSVSFSLRV 291

Query: 61  LSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGD--EHCHDVDLVVA 120
           L LAN+LGAS  TK E+IRRCS LLE ATV DLLF++  + +DD G   E   DVDLVV 
Sbjct: 292 LHLANVLGASQVTKAEIIRRCSLLLEXATVKDLLFSNSMSKDDDNGQCLELDDDVDLVVG 351

Query: 121 VLESFLMAWRRQSPAAD-ENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYLAEALP 180
           VLES+LM WRR +   D EN Q L SIRKVGKLID YLQVVARDR M VAKMI +AEALP
Sbjct: 352 VLESYLMMWRRNNSDDDVENEQHLRSIRKVGKLIDCYLQVVARDRKMCVAKMICVAEALP 411

Query: 181 D------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERLPLRTV 240
           D                  EHP +SKA++KRLCRVLNCQKL+ ++R+HAVKNERLPLRTV
Sbjct: 412 DHARPTHDHIYKAINIFLKEHPDISKAEKKRLCRVLNCQKLTPELRSHAVKNERLPLRTV 471

Query: 241 VQVLFFEQEKGNSKTS---------------------SRVAAASDELRSRADEKLRRSAS 281
           VQVLFFEQE   SKTS                      +   + D +R +  +KLRRS S
Sbjct: 472 VQVLFFEQEMKGSKTSRQGVVEGTEEDQLQDEMRCEQKQRPGSGDLMRPQTQQKLRRSES 531

[Close]

BLAST of CmoCh18G006220 vs. NCBI nr
Match: gi|566207927|ref|XP_002323131.2| (hypothetical protein POPTR_0016s00530g [Populus trichocarpa])

HSP 1 Score: 291.2 bits (744), Expect = 1.9e-75
Identity = 163/277 (58.84%), Postives = 204/277 (73.65%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPD----------ISAQENSAKN-RQILETLISLIPPDQESI 60
           MLPP LIGEALHVYACRWLPD          +S  ++ A+N R+I+E ++++IP D+ S+
Sbjct: 224 MLPPQLIGEALHVYACRWLPDATKITPPESSVSQTDDVAENHRKIIEIIVTMIPADKGSV 283

Query: 61  SVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHD 120
           SV F LRLLS+A+ LGAS+ TKTE+IRR S  LEEATVSDLLF +HS+SN     +H +D
Sbjct: 284 SVGFLLRLLSIASHLGASTVTKTELIRRSSLQLEEATVSDLLFPTHSSSN-----QHYYD 343

Query: 121 VDLVVAVLESFLMAWRRQSPAADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYL 180
           +DLV AVL+SFL+ WRR SPA  EN+Q + SIRKVGKLID+YLQVVARD N+PV+K++ +
Sbjct: 344 IDLVAAVLDSFLLLWRRTSPAPIENSQSMRSIRKVGKLIDTYLQVVARDINLPVSKVLSV 403

Query: 181 AEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERL 240
           AEALPD                  EHP LSKAD+KRLCR L+CQKLS +VR HAVKNERL
Sbjct: 404 AEALPDIARKDHDDLYKGINIYLKEHPELSKADKKRLCRPLDCQKLSPEVRTHAVKNERL 463

Query: 241 PLRTVVQVLFFEQEKGNSKTSSRVAAASDELRSRADE 249
           PLRTVVQVLFFEQ+KG+     R+ +A ++L SR  +
Sbjct: 464 PLRTVVQVLFFEQDKGSRANDQRM-SAQEQLLSRGKQ 494

[Close]

BLAST of CmoCh18G006220 vs. NCBI nr
Match: gi|743923292|ref|XP_011005734.1| (PREDICTED: BTB/POZ domain-containing protein At5g47800-like isoform X1 [Populus euphratica])

HSP 1 Score: 290.0 bits (741), Expect = 4.3e-75
Identity = 160/264 (60.61%), Postives = 193/264 (73.11%), Query Frame = 1


Query: 1   MLPPPLIGEALHVYACRWLPD---ISAQENSA--------KNRQILETLISLIPPDQESI 60
           MLPP LIGEALHVYACRWLPD   I+  E+S         K+R+ILE +++ IP D+ S+
Sbjct: 226 MLPPQLIGEALHVYACRWLPDTTKITRPESSVSQTDEVTDKHRKILEIIVNKIPSDKGSV 285

Query: 61  SVSFSLRLLSLANLLGASSATKTEVIRRCSALLEEATVSDLLFASHSASNDDGGDEHCHD 120
           SV F LRLLS+AN LGAS+ TKTE+IRR S  LEEATVSDLLF SHS+SN     ++ +D
Sbjct: 286 SVGFLLRLLSIANYLGASTVTKTELIRRSSQQLEEATVSDLLFPSHSSSN-----QYYYD 345

Query: 121 VDLVVAVLESFLMAWRRQSPAADENAQLLISIRKVGKLIDSYLQVVARDRNMPVAKMIYL 180
           +DLV AVLESFL+ WRR SPA  EN Q + SIRK+GKL+DSYLQ VA D N+PV+K++ +
Sbjct: 346 IDLVAAVLESFLLLWRRTSPAPTENTQFMRSIRKIGKLVDSYLQAVATDINLPVSKVLSV 405

Query: 181 AEALPD------------------EHPYLSKADRKRLCRVLNCQKLSADVRAHAVKNERL 236
           AEALPD                  +HP LSKAD+KRLCR L+CQKLS +VR HAVKNERL
Sbjct: 406 AEALPDIARKDHDDLYRAINIYLKKHPDLSKADKKRLCRKLDCQKLSPEVRTHAVKNERL 465

The following BLAST results are available for this feature:

BLAST of CmoCh18G006220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5780_ARATH	4.8e-66	53.60	BTB/POZ domain-containing protein At5g47800 OS=Arabidopsis thaliana GN=At5g47800...	[more]
Y1790_ARATH	3.7e-42	37.97	BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana GN=At1g67900...	[more]
Y3649_ARATH	1.5e-35	33.54	BTB/POZ domain-containing protein At3g26490 OS=Arabidopsis thaliana GN=At3g26490...	[more]
RPT3_ARATH	3.4e-35	42.19	Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=2	[more]
NPY2_ARATH	2.7e-32	31.83	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1	[more]

BLAST of CmoCh18G006220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYE4_CUCSA	1.4e-80	57.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170000 PE=4 SV=1	[more]
B9IH34_POPTR	1.4e-75	58.84	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s00530g PE=4 SV=2	[more]
A0A061GGM0_THECC	1.1e-74	53.38	Root phototropism protein, putative isoform 2 OS=Theobroma cacao GN=TCM_030464 P...	[more]
A0A061GPH2_THECC	1.1e-74	53.38	Root phototropism protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030464 P...	[more]
A0A061GHJ0_THECC	1.1e-74	53.38	Root phototropism protein, putative isoform 3 OS=Theobroma cacao GN=TCM_030464 P...	[more]

BLAST of CmoCh18G006220 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47800.1	2.7e-67	53.60	Phototropic-responsive NPH3 family protein	[more]
AT1G67900.1	2.1e-43	37.97	Phototropic-responsive NPH3 family protein	[more]
AT3G26490.1	8.5e-37	33.54	Phototropic-responsive NPH3 family protein	[more]
AT5G64330.1	1.9e-36	42.19	Phototropic-responsive NPH3 family protein	[more]
AT2G14820.1	1.5e-33	31.83	Phototropic-responsive NPH3 family protein	[more]

BLAST of CmoCh18G006220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443660\|ref\|XP_004139595.1\|	2.0e-80	57.36	PREDICTED: BTB/POZ domain-containing protein At5g47800 isoform X2 [Cucumis sativ...	[more]
gi\|778659535\|ref\|XP_011654640.1\|	2.0e-80	57.36	PREDICTED: BTB/POZ domain-containing protein At5g47800 isoform X1 [Cucumis sativ...	[more]
gi\|659118082\|ref\|XP_008458941.1\|	2.6e-80	57.01	PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At5g47800-like...	[more]
gi\|566207927\|ref\|XP_002323131.2\|	1.9e-75	58.84	hypothetical protein POPTR_0016s00530g [Populus trichocarpa]	[more]
gi\|743923292\|ref\|XP_011005734.1\|	4.3e-75	60.61	PREDICTED: BTB/POZ domain-containing protein At5g47800-like isoform X1 [Populus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027356	NPH3_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G006220.1	CmoCh18G006220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027356	NPH3 domain	PFAM	PF03000	NPH3	coord: 176..200 score: 2.7E-6coord: 3..175 score: 4.4
IPR027356	NPH3 domain	PROFILE	PS51649	NPH3	coord: 1..226 score: 45
None	No IPR available	PANTHER	PTHR32370	FAMILY NOT NAMED	coord: 1..281 score: 2.7E
None	No IPR available	PANTHER	PTHR32370:SF19	SUBFAMILY NOT NAMED	coord: 1..281 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G006220	CmaCh18G006340	Cucurbita maxima (Rimu)	cmacmoB407
CmoCh18G006220	CsaV3_1G015290	Cucumber (Chinese Long) v3	cmocucB0472
CmoCh18G006220	Cla97C01G011130	Watermelon (97103) v2	cmowmbB380
CmoCh18G006220	Bhi08G000581	Wax gourd	cmowgoB0534
CmoCh18G006220	CsGy1G014930	Cucumber (Gy14) v2	cgybcmoB096
CmoCh18G006220	Carg27929	Silver-seed gourd	carcmoB1304

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G006220	Watermelon (Charleston Gray)	cmowcgB342
CmoCh18G006220	Watermelon (97103) v1	cmowmB378
CmoCh18G006220	Bottle gourd (USVL1VR-Ls)	cmolsiB357
CmoCh18G006220	Cucurbita moschata (Rifu)	cmocmoB167
CmoCh18G006220	Cucumber (Gy14) v1	cgycmoB0881
CmoCh18G006220	Cucurbita maxima (Rimu)	cmacmoB220
CmoCh18G006220	Wild cucumber (PI 183967)	cmocpiB395
CmoCh18G006220	Cucumber (Chinese Long) v2	cmocuB392