CmoCh18G006200 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACAATCGATATCTTCTCACTTTCAGGCCGTTAACCAGCATCAATCCCATGATCCACCAAAAACGTAAGGAACTTGAGGCAGGACCATTGGTGGGGCAGGCTCAACAGTTAACTCAGGTTGGTGGAAGTCAGTCCTCTTGGCAGCCCCCTGCCTAGGCAACTGAACCACGCGTGGGAGTTTATTATCTTGAAGTTTTAAAGGATGGTGAGGCTATAGATCGAATTAATTTAGACAAGCGGAGGCACATTTTTGGGAGACAATTCCATACTTGTGATCTTGTGCTTGATCACCCATCAGTTTCCCGTCAACATGCTGCTGTTATTCCTCATAAGAATGGAAGGTTAGATGTTAGTTTTCTCAATTATGCTATCATTAATTTTGTTTCAATTTATTTCATAAAATTTTGAACCTATAATTAGTCCCTTGAATTGTATTATTGATCATAGGTTATTCATGGGTGATGTATTTTTCTCTATAATTTTAATCTTTAGTAGATTTCTTGATACAGTTGGATGTTCACGTTCTCATCACTGAAACAGATAATCTGTTTTAGGGTAGATATCATTAGTGTGTTTATTGGAGTGAGGTGATTATAAATGGAGTGTTTTCATTTTTTGGTGTGTGGGTGTAGCCTAATAAGGATATTACTCCTAATCTTATTGAATAAATGGTAAAAAGAAATAATCGTGTCAAAGAATACGAACTCATGTAGTTGGATGATGGTCTCAAGAACCACACCGGAAGATAGTTGCATGACGGCTGAAAGGTTGAAAAACTATCATGAAAGGACTTAATGGACATTGGATAGCCAAGGGAGATAGGAGATTGGGAATAAACTTCAACTGGAATATTAAAGGCTCATATGAGGGAGAAGTTGCTGTTGAAGAAGGAAGCAAGCTTATTAGGAAAAATAGAGGAATGAATGGGCATTGTTGCAAGATTGGTGGTGGGCCTCGCCAAGGTGTTTATATTTTGACAATTAGGGAGAAGATGGAGGGATGCTTCCTTGTTTGTGGAATCAAAGTAGTGAGCAAGAAGTTGAGTTCCGCCACATCAGCATGATCTGTGAAAAGACATTTCCATTGAGCTCATTTCCTTTTCTTTTCTTGTCTAGTACTCTATGCGGGATGGGAAGGAGACCCTTTTCTCTACATTTCCTCATTTATACAATCTGTCTTGCATGAAAAACCATTATGTGGTTGATGTTTTGGATCCTTCTGGGAGCTTTCCCTCCTCTTTTGGCTTTCTTCATCCATTACCTCATAGGGAAACGAAAGATGTCTTGGCTCTCCCTTTGATTGAGAAGTTTGTCCTTAGACCAGGGAGAAAGGGACATTCATCTTTGGAGCAAGCCTCTAAGAGGATTTCTCTTGTAAATCGTTGTTTCAGTGTTTATTGGATCCCATCTTGATTAGCAAGTCAGTTTTTTCTTCTCTGTCGAAGGTGAAAGTCTTAAAGAAAGTTCAATTCTTCGTTTGACTAGTCATCCAAGAAGAGATAACACTTCATATTGACTTTTAAAGAAGATGTCTTATTTGGTTGGTTCGTTTTGTTGTATTGTTTGTTGGAGGGAGGAGGAAGAGTTTGATCATATTCTTTGAAGTTGCAATTTTGCTCACTTATTTGGATCCTCTTTTTTGAGGTGTTTGGCTTTTAGCTGTCTAGACACATAGATAGTAGGGAAATGGTTGAGGAGTTCGTTCTCCATCCGCCGTTTTGAAAGAAGGGAAAGCTTGGGTGTTGTGGGGTTTGTGGGAGGAGAGAAATGAGATTGGAACTTCGGAGGAGTTGAGAGGGGCCCTAGTGATGTATGTCCCTTGCTAGGTTTTATGTTTCTCTGTGGGTATTGGTAACACTGTTATTTTGTAATTATTCCTTATGTTTTGTTTTACTTGATTGGCGCCTTTTTTAGTGGGGTTTCCTTATGTATGCTACATTTTTGGATGCCAAAGTAAGCATATGGCAGGTTAGTTGATGCTTGCAACAAAAATACGGTCCTAACTTAACTTAAAATATAAGATTTAGGTTCGGTAGCAGGTGTGATTCAATCCATAAATGAACAAATGTTACTGCAATTTGTTTAACAATACTCCTGCTTTTGAATTCAAACGAAGCGGTTTGTGGGTGATATGCCTTGGTAGAGGGAAGATCAAAAGTTTCTAGCGACCAAAACATGAGAAAACCAATGAGCTTATTGAGCAGGTTTGGAATTATTAGCAGATATGCATTCTCTTTCAGTGAGTTCCTATAAGATCACGTTGGAATAAGGTTTCGCCGCTTCACTCTGACTTTATTGTTGCCCGCTTGATGTCCATACGCTATTCATGTTGGTTTCTTTTCTTTTGAGGGTTTATTTTTGATAATGGTAGATGTGAATAATCTATTATTGGTGCGATCTATGTTGGAAATGATAAGTTTGAAGCACCCTTTGAATGCTAAACCCTACACCTCCATCTATAATTGGCATTACCCACAAGCTGCAATGGACATTCATTTTATTTTCTATGGATAATATGATTGTGATGGGTTGATGGTTTTAGACCATATCAGTCAGTGAGTTTGAGGTACTTTGTCCTACTGCATCATGGGGGAACTGGGGGTCTAATGTGTGCTCAATAGGTTAAAACAATTTGTACCCATTGGAGGGGCATGGAGAATTTGGTGAAGGGACGATGCTGTGCAACCATTGGATGATTTTATTTATTTATTTTTTAATTTTAAAAAAATATGCGTGACTGTTCATTCTAAGCGCACCTCGATTATTCTCGTGAGACAATTGACCCTACTACATATTTTGTTGCCAAGTTGCATTTAGTTGGATGATGTGATATTATTTAGAACCAGGGTCTTGTTATCCACCGTAAAGGTATTTTTGAACTTTTTTTTAAAGTTTAAGAATACTTTGAGTTTTTATTAAGTTTTAAGGATACCATTGAAACTTTTGAAAGTTGAAGGGTATTTTAAAGTACAAAATTAGTAGTATTTTTATTAATGTTTTAACATGAAGAAGATACTTTTTTATGGCCATATGGCATCACTAACACTAATTGAATTTGCAGCATATATGTAATCGATTTGGGATCTGCTCATGGAACATTTGTGGCTAACGAGCGATTGACTAACGAGTCCCCAGTCGAGCTTGAAGCTGGACAGTCTTTGCGATTTGCTGCATCACGAGGACTTATATCTTGA ATGCACAATCGATATCTTCTCACTTTCAGGCCGTTAACCAGCATCAATCCCATGATCCACCAAAAACGTAAGGAACTTGAGGCAGGACCATTGGTGGGGCAGGCTCAACAGTTAACTCAGGATGGTGAGGCTATAGATCGAATTAATTTAGACAAGCGGAGGCACATTTTTGGGAGACAATTCCATACTTGTGATCTTGTGCTTGATCACCCATCAGTTTCCCGTCAACATGCTGCTGTTATTCCTCATAAGAATGGAAGCATATATGTAATCGATTTGGGATCTGCTCATGGAACATTTGTGGCTAACGAGCGATTGACTAACGAGTCCCCAGTCGAGCTTGAAGCTGGACAGTCTTTGCGATTTGCTGCATCACGAGGACTTATATCTTGA ATGCACAATCGATATCTTCTCACTTTCAGGCCGTTAACCAGCATCAATCCCATGATCCACCAAAAACGTAAGGAACTTGAGGCAGGACCATTGGTGGGGCAGGCTCAACAGTTAACTCAGGATGGTGAGGCTATAGATCGAATTAATTTAGACAAGCGGAGGCACATTTTTGGGAGACAATTCCATACTTGTGATCTTGTGCTTGATCACCCATCAGTTTCCCGTCAACATGCTGCTGTTATTCCTCATAAGAATGGAAGCATATATGTAATCGATTTGGGATCTGCTCATGGAACATTTGTGGCTAACGAGCGATTGACTAACGAGTCCCCAGTCGAGCTTGAAGCTGGACAGTCTTTGCGATTTGCTGCATCACGAGGACTTATATCTTGA
BLAST of CmoCh18G006200 vs. Swiss-Prot
Match: PP1R8_MOUSE (Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus GN=Ppp1r8 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 1
BLAST of CmoCh18G006200 vs. Swiss-Prot
Match: PP1R8_HUMAN (Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens GN=PPP1R8 PE=1 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 1
BLAST of CmoCh18G006200 vs. Swiss-Prot
Match: PP1R8_BOVIN (Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 1
BLAST of CmoCh18G006200 vs. Swiss-Prot
Match: NADAP_HUMAN (Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 33/84 (39.29%), Postives = 44/84 (52.38%), Query Frame = 1
BLAST of CmoCh18G006200 vs. Swiss-Prot
Match: SNIP1_MOUSE (Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.5e-06 Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TrEMBL
Match: A0A0A0LVY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170010 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.3e-41 Identity = 95/136 (69.85%), Postives = 98/136 (72.06%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TrEMBL
Match: B9SGC5_RICCO (Nuclear inhibitor of protein phosphatase-1, putative OS=Ricinus communis GN=RCOM_0882630 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 6.1e-39 Identity = 88/135 (65.19%), Postives = 95/135 (70.37%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TrEMBL
Match: A0A067KUL3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08977 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.0e-38 Identity = 89/135 (65.93%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TrEMBL
Match: A0A0J8EMV8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g184200 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.5e-37 Identity = 75/89 (84.27%), Postives = 84/89 (94.38%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TrEMBL
Match: M1BQY5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019743 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.0e-37 Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TAIR10
Match: AT5G47790.1 (AT5G47790.1 SMAD/FHA domain-containing protein ) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-37 Identity = 70/89 (78.65%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TAIR10
Match: AT5G38840.1 (AT5G38840.1 SMAD/FHA domain-containing protein ) HSP 1 Score: 70.5 bits (171), Expect = 8.8e-13 Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 1
BLAST of CmoCh18G006200 vs. TAIR10
Match: AT1G34355.1 (AT1G34355.1 forkhead-associated (FHA) domain-containing protein ) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-07 Identity = 24/63 (38.10%), Postives = 36/63 (57.14%), Query Frame = 1
BLAST of CmoCh18G006200 vs. NCBI nr
Match: gi|659118084|ref|XP_008458942.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis melo]) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41 Identity = 95/136 (69.85%), Postives = 99/136 (72.79%), Query Frame = 1
BLAST of CmoCh18G006200 vs. NCBI nr
Match: gi|449443484|ref|XP_004139507.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis sativus]) HSP 1 Score: 177.2 bits (448), Expect = 1.9e-41 Identity = 95/136 (69.85%), Postives = 98/136 (72.06%), Query Frame = 1
BLAST of CmoCh18G006200 vs. NCBI nr
Match: gi|255568136|ref|XP_002525044.1| (PREDICTED: uncharacterized protein LOC8264782 [Ricinus communis]) HSP 1 Score: 168.3 bits (425), Expect = 8.8e-39 Identity = 88/135 (65.19%), Postives = 95/135 (70.37%), Query Frame = 1
BLAST of CmoCh18G006200 vs. NCBI nr
Match: gi|802614755|ref|XP_012074819.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curcas]) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38 Identity = 89/135 (65.93%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of CmoCh18G006200 vs. NCBI nr
Match: gi|698462986|ref|XP_009782112.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Nicotiana sylvestris]) HSP 1 Score: 166.4 bits (420), Expect = 3.3e-38 Identity = 78/89 (87.64%), Postives = 84/89 (94.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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