CmoCh18G005850 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCAAATTCATATCCTTCTCTTCGCTCCATCTTCTCCAATTAAAAAAAAAGCCCTAAAAATGCACTGAATCAATCTCTGCACAATCTTAGTATCTTCCAAGTTCCGTGTGCAACTGATATCTTTCTTCTTCAAGGTCTCGAGCTTTTCATCCATGGCGAAAGTCATCAATCCTTCTTCGCGCTACAGTTCGTACGATGTGCGGTCTTCCGGTTCCTCGCATTTCTCCGATCCTTCTTCTTCCTCTGAGTTCAAGCTCAAGTCTCCTATGAAGGCGGATTCGTCGTCTTCGCGCGCTATTGTTAAGAGCAAGGCGGCTGATCTGCCTAGGGCTAAGACGAAGCCGTCGGATCAGAATTTGACGGCGATGGTGAAGAAATTCATGGAGAAGCGATCTGGTTTGAAGCCGAAGACGGTGAAGCATGCGACTGGGTTGGTGATTCCGTCGGATTTGATTGCGGAGGATCTGAAGAAGACGGCGAGGAAGGGAACGAACTTCGGTGGGCTGCATAAGAAGCTGTTTGGGAAGGGAATGGTGGAGAAGAAGGAGAAGGAGGTGAAGGCGTTGACGGAGGTGAAAGGAAATACAAGGACATTGGCGATGGTGCTGAGGAGTGAAAGAGAGCTTTTGAGTTTGAATAAGGAACAAGAACTGGAGATCACTGAGCTCAAATTAGTCCTGGAGGAGAAGTATGGAGAGGTCAGAAGTAGGATTATCTCTACTTTTTACATTAAACTTCCAATTCTACTCGATCATTTCTTAGTAAGAACAATACACTTTTAGTTAATTTTTTCAGTTTTTTTTAAAGAAACTTTGATGTGGTTGCATTTTTTTGATGTCTTTAGCTAGATTTTGATGTTTTCATTATGAAGTTTGGATGTTTTTCAACCTGATTGATTTTATGCTGAGGTTTGAATATTATAAATGGTTGGATTCTTCTTAAAGATTTGTGAGCTGTGAATTATGGGGTAGTAATCTTCTACACATGGTTCGTTAACAGAACATTGTTGCTAATTGTTGTTATCAGATTGAGAAGTTGAAAGATTTATGTTTGAAGCAAAGAGAAGAAATAAAGTCACTGAAGAATGCAATATTGTTCCCAGATGTTATGAACTCTCAGCTTCAAGGCATCCTAGAAAAGCAGGACTCAGAGTTGAAGCAAGCCAAACAAATCATCCCCACTCTACAAAAGCAGGTCACTACTCTCACTGGCCAGCTTTATTCCCTTGCAGAGGACCTTGCCGAGGTATGAAAGAACGCTATGTTAAGTTGAACCTAATGCTTTTAACCGTAGATGTCACAACTTGTTAGGAATCACGACTCGACGCTATGTTAAGTTGAACCTAATGCTTTAAACAGTAGATGTCACAACTTGTTAGGAATCACGACTCTTCATAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCGTACCAATGGAAATGTATTTTCCTAAATTAGCCAATGTGAGACTCCCTCCCAACAATCCTCGACACAACTTAGGTCTAGACCTTGAAAGCTTTCATTTCTTTGATATGAACTATGAAATTACAGCTTAAAACACAGCCTCAAATGAAATTTGGACACTCCGTGTTATGTTTCTGGTACCGACTAGCTTTTATTGAATAGGTATTCACTGCTATCTCGAAGGCAAGTTGATTGATTTAACTAATAGAACGACTGGCATTTTATTTTGGGCAGGTGAAGGCGGATAAGTATTCAGGAAAGGGCTGGTTACAAGGTAGCAGTTCTCCTCACACACCAACATATGATCACGAGGATGCTTCTAACCCTTTAGTAAGCACTGAAGATATCCTTGGATCTCATGTTCATCTTCTTAGTGTTGATATGTATTAATCCTGAATATAAGAGATTAGAAAGACAACAAGGCGAGCCCTCATTATTAAAATCATCTAGGACTTTGCCTTACCTAAACAGTCAATTCATGAACTAGATGCAAATCACTCATCCAGCATTTATGTAATTCAGGAGTTCAGTGCCTGTGATCCAACGTCCCCTAGCCGTCCAGATGACTATTTGCTGAAGGATGTGAATCCCTGTCTAACACCCTATTATGCAACTAAATCCAAGGTATAACTGTCCATCTCTGCCATTAATTTCTCACTTCACGAGTGTTCATTCAGTAATGTAATTAATTGAACTCATTCCTACAGGACTTTGAGGCAATGGGATATGATTCTCCGCGAGATGAAATTTTATCCCATAACAGAATGGAATCTGGTTTTACATCATGTTCCAGGAAATTGTCCAAAAGTTCTGATTGCAGACAGAATTCCAACAAAGCAAAGACTACAAAAACAGCTCGAAGATCCGACGAGGCCAAGTACACGTATGGAAAGCCTATGCATAAATTTTACTGAACCTCATTTTTTTTTCCAGTTGTAGTTCACATTCTTGATCCTTCTACATAATTGTTTTACCGTCACCTACTATCACTGTATGAACCAACAGAGCTTTAGGGGGGAGTAATACCATTGTGTACATGCTACATTTGAAAAGCTCATCAATAATAG AAGCAAATTCATATCCTTCTCTTCGCTCCATCTTCTCCAATTAAAAAAAAAGCCCTAAAAATGCACTGAATCAATCTCTGCACAATCTTAGTATCTTCCAAGTTCCGTGTGCAACTGATATCTTTCTTCTTCAAGGTCTCGAGCTTTTCATCCATGGCGAAAGTCATCAATCCTTCTTCGCGCTACAGTTCGTACGATGTGCGGTCTTCCGGTTCCTCGCATTTCTCCGATCCTTCTTCTTCCTCTGAGTTCAAGCTCAAGTCTCCTATGAAGGCGGATTCGTCGTCTTCGCGCGCTATTGTTAAGAGCAAGGCGGCTGATCTGCCTAGGGCTAAGACGAAGCCGTCGGATCAGAATTTGACGGCGATGGTGAAGAAATTCATGGAGAAGCGATCTGGTTTGAAGCCGAAGACGGTGAAGCATGCGACTGGGTTGGTGATTCCGTCGGATTTGATTGCGGAGGATCTGAAGAAGACGGCGAGGAAGGGAACGAACTTCGGTGGGCTGCATAAGAAGCTGTTTGGGAAGGGAATGGTGGAGAAGAAGGAGAAGGAGGTGAAGGCGTTGACGGAGGTGAAAGGAAATACAAGGACATTGGCGATGGTGCTGAGGAGTGAAAGAGAGCTTTTGAGTTTGAATAAGGAACAAGAACTGGAGATCACTGAGCTCAAATTAGTCCTGGAGGAGAAGTATGGAGAGATTGAGAAGTTGAAAGATTTATGTTTGAAGCAAAGAGAAGAAATAAAGTCACTGAAGAATGCAATATTGTTCCCAGATGTTATGAACTCTCAGCTTCAAGGCATCCTAGAAAAGCAGGACTCAGAGTTGAAGCAAGCCAAACAAATCATCCCCACTCTACAAAAGCAGGTCACTACTCTCACTGGCCAGCTTTATTCCCTTGCAGAGGACCTTGCCGAGGTGAAGGCGGATAAGTATTCAGGAAAGGGCTGGTTACAAGGTAGCAGTTCTCCTCACACACCAACATATGATCACGAGGATGCTTCTAACCCTTTAGAGTTCAGTGCCTGTGATCCAACGTCCCCTAGCCGTCCAGATGACTATTTGCTGAAGGATGTGAATCCCTGTCTAACACCCTATTATGCAACTAAATCCAAGGACTTTGAGGCAATGGGATATGATTCTCCGCGAGATGAAATTTTATCCCATAACAGAATGGAATCTGGTTTTACATCATGTTCCAGGAAATTGTCCAAAAGTTCTGATTGCAGACAGAATTCCAACAAAGCAAAGACTACAAAAACAGCTCGAAGATCCGACGAGGCCAAGTACACGTATGGAAAGCCTATGCATAAATTTTACTGAACCTCATTTTTTTTTCCAGTTGTAGTTCACATTCTTGATCCTTCTACATAATTGTTTTACCGTCACCTACTATCACTGTATGAACCAACAGAGCTTTAGGGGGGAGTAATACCATTGTGTACATGCTACATTTGAAAAGCTCATCAATAATAG ATGGCGAAAGTCATCAATCCTTCTTCGCGCTACAGTTCGTACGATGTGCGGTCTTCCGGTTCCTCGCATTTCTCCGATCCTTCTTCTTCCTCTGAGTTCAAGCTCAAGTCTCCTATGAAGGCGGATTCGTCGTCTTCGCGCGCTATTGTTAAGAGCAAGGCGGCTGATCTGCCTAGGGCTAAGACGAAGCCGTCGGATCAGAATTTGACGGCGATGGTGAAGAAATTCATGGAGAAGCGATCTGGTTTGAAGCCGAAGACGGTGAAGCATGCGACTGGGTTGGTGATTCCGTCGGATTTGATTGCGGAGGATCTGAAGAAGACGGCGAGGAAGGGAACGAACTTCGGTGGGCTGCATAAGAAGCTGTTTGGGAAGGGAATGGTGGAGAAGAAGGAGAAGGAGGTGAAGGCGTTGACGGAGGTGAAAGGAAATACAAGGACATTGGCGATGGTGCTGAGGAGTGAAAGAGAGCTTTTGAGTTTGAATAAGGAACAAGAACTGGAGATCACTGAGCTCAAATTAGTCCTGGAGGAGAAGTATGGAGAGATTGAGAAGTTGAAAGATTTATGTTTGAAGCAAAGAGAAGAAATAAAGTCACTGAAGAATGCAATATTGTTCCCAGATGTTATGAACTCTCAGCTTCAAGGCATCCTAGAAAAGCAGGACTCAGAGTTGAAGCAAGCCAAACAAATCATCCCCACTCTACAAAAGCAGGTCACTACTCTCACTGGCCAGCTTTATTCCCTTGCAGAGGACCTTGCCGAGGTGAAGGCGGATAAGTATTCAGGAAAGGGCTGGTTACAAGGTAGCAGTTCTCCTCACACACCAACATATGATCACGAGGATGCTTCTAACCCTTTAGAGTTCAGTGCCTGTGATCCAACGTCCCCTAGCCGTCCAGATGACTATTTGCTGAAGGATGTGAATCCCTGTCTAACACCCTATTATGCAACTAAATCCAAGGACTTTGAGGCAATGGGATATGATTCTCCGCGAGATGAAATTTTATCCCATAACAGAATGGAATCTGGTTTTACATCATGTTCCAGGAAATTGTCCAAAAGTTCTGATTGCAGACAGAATTCCAACAAAGCAAAGACTACAAAAACAGCTCGAAGATCCGACGAGGCCAAGTACACGTATGGAAAGCCTATGCATAAATTTTACTGA
BLAST of CmoCh18G005850 vs. TrEMBL
Match: A0A0A0LTE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181410 PE=4 SV=1) HSP 1 Score: 648.3 bits (1671), Expect = 6.0e-183 Identity = 344/390 (88.21%), Postives = 362/390 (92.82%), Query Frame = 1
BLAST of CmoCh18G005850 vs. TrEMBL
Match: W9QDY9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010587 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 2.7e-130 Identity = 276/406 (67.98%), Postives = 315/406 (77.59%), Query Frame = 1
BLAST of CmoCh18G005850 vs. TrEMBL
Match: A0A067K2P7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19401 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 5.6e-120 Identity = 268/396 (67.68%), Postives = 308/396 (77.78%), Query Frame = 1
BLAST of CmoCh18G005850 vs. TrEMBL
Match: M5WTK0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007192mg PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 9.8e-117 Identity = 259/393 (65.90%), Postives = 297/393 (75.57%), Query Frame = 1
BLAST of CmoCh18G005850 vs. TrEMBL
Match: F6I2B0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0508g00040 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.4e-115 Identity = 257/402 (63.93%), Postives = 304/402 (75.62%), Query Frame = 1
BLAST of CmoCh18G005850 vs. TAIR10
Match: AT4G17240.1 (AT4G17240.1 unknown protein) HSP 1 Score: 238.8 bits (608), Expect = 5.6e-63 Identity = 188/383 (49.09%), Postives = 237/383 (61.88%), Query Frame = 1
BLAST of CmoCh18G005850 vs. NCBI nr
Match: gi|659127243|ref|XP_008463601.1| (PREDICTED: uncharacterized protein LOC103501712 [Cucumis melo]) HSP 1 Score: 652.1 bits (1681), Expect = 6.0e-184 Identity = 347/389 (89.20%), Postives = 363/389 (93.32%), Query Frame = 1
BLAST of CmoCh18G005850 vs. NCBI nr
Match: gi|449443692|ref|XP_004139611.1| (PREDICTED: uncharacterized protein LOC101217191 [Cucumis sativus]) HSP 1 Score: 648.3 bits (1671), Expect = 8.7e-183 Identity = 344/390 (88.21%), Postives = 362/390 (92.82%), Query Frame = 1
BLAST of CmoCh18G005850 vs. NCBI nr
Match: gi|703066149|ref|XP_010087636.1| (hypothetical protein L484_010587 [Morus notabilis]) HSP 1 Score: 473.4 bits (1217), Expect = 3.8e-130 Identity = 276/406 (67.98%), Postives = 315/406 (77.59%), Query Frame = 1
BLAST of CmoCh18G005850 vs. NCBI nr
Match: gi|1009107357|ref|XP_015879317.1| (PREDICTED: uncharacterized protein LOC107415489 [Ziziphus jujuba]) HSP 1 Score: 469.2 bits (1206), Expect = 7.2e-129 Identity = 281/399 (70.43%), Postives = 316/399 (79.20%), Query Frame = 1
BLAST of CmoCh18G005850 vs. NCBI nr
Match: gi|802681963|ref|XP_012082185.1| (PREDICTED: uncharacterized protein LOC105642104 [Jatropha curcas]) HSP 1 Score: 439.1 bits (1128), Expect = 8.0e-120 Identity = 268/396 (67.68%), Postives = 308/396 (77.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|