CmoCh18G005310 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G005310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
Location	Cmo_Chr18 : 3940098 .. 3951077 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGTATCCTTTCAATACTTAGAGTTTGATCTAAAAGCTAAGTGATATATATGCTACGTTCTTGTGGATCTTTTCCTCTTCTTACAAGTTTCCTTTGGGAAGAGCCATCTAATGGAGTTGCTCTTTTAAGCCAATTGTTCCATGTAATAGTAGAAGAAAGAAAGTTTTCAGATGTAAGGAAGAGTACATAGATGAACGGACATCAAATGAGAGTGATCTAAGAGTAAGATTGTTGAACCGAGATTAAAATAATTCAAGTAATTATCTATACCAACAAGGTTCACTTTCTTTTTTTTGATAGCTCAATTATTGTAATGACCCAAATCCATTGCTAGTTGATATTGTCGTTTTTGGGCTTTCCCTTTCGGGCTTCCTCGTTTTTAAAACGAGTCTGCGAGGGAAAAGTTTCCATACCCATATAAAGGATGTTTCGTTTTCCTTCTTAACGATGCGGGATCTCACAATCCACTCTAAGAGGGTTTAGTTCTCCTCCCCAACCTACGTGGCATTTCACAATTATAAAAACTCTAAAGTTAACTTGATTTGTTTTGACCAATTCTAAGTTGGATGACCTACGTATTTTCCTATGAAACATGTGACTGAGGACAAGGACATGTGTTAATTTGTGGAGATTATAGTTTTCATTCGAGAATCGACAAATAAGTAACGTGGTTATGTTACAAAGGATACAGGTTCCAAATCCAAATTCCTTTGTTTCTTTCAATCGTGTTCATAATTTGTTGTTATTGTGATTTTGTAGGGAGAACGAAGACAGTTTTGCAGAACTAAAACAAGTAAATTGGCTAGAAGTAACTGGTTCAACATCGGAAAAAGTTGAGGTTGGGAAATGGTTCAAAGTGAGTTTCAATGTGACACTACGACCCAATGCTTTTGGATGGGATGAGTCTAATATTTACATAATGGCTAAGATTGGGAAAAAGGGGCGTTTCAGTTTCAAGAAACTGAATCTTCGTAATAAAAATCCAGACGAAAGATTTAACATTCCCCAGAATGAATTAAAAATTGAAGTTGCCAAATCCGCTGAGGATCCCATTCTCTACTTTGGTATGTATGAAGTTTGGAGCAACAGATGGAAAGGAGGGTTGAGGATCCATCATGCACTCGTTGAGGAGTGCGAGGCACCAAAAGAGAAAAAATTGCGTTGATCATGTCTATAACAATTGCTATCGACTCGATGTGTGGTTTCAAGAACATGAGAATAATAGAAGAATAATGTACTTATGTATCCACTAGTATTATGGTGATACTTTGCAATGTATTTCGTGGATTTTATTTGTTTTAGAAGAATATGCACCAAAAATATGTATTGTATTTGTTGATATGTTGGGAAGTTTCCATATTGAGTATGTTTGGCTATCTCTAGAAATCTTTCAACTTGGAGAAGTTGGATACGAAGTGTTTTAACATGTTTAAGTTATCAAAAACATGAATCTCTTCAACTTGCATGTTTTTTTGGGTACTTATTGGGATGTAAGTTGTGTCCATGTAGAAGAACATGAAGTTTACGTTGCTTGGATCATACGTATAAACAAAAAAGACTAAAAAAACGATGGTCAAACTAAGAAAAGAGAGAAGGAAAACATGGGTCGTAGCACGAGTTCCTTGGTTGGCTTCACGCAGAGCATGTAAGCTGTGTCATAACCTCATTAAGTGAAAGTAGTTTGTGCCCCCACATGCAAGAGAGACGAGGGGCGACCCTTAAGTGGCGCCCATCCAGCCACGTGAAGGTCATGATTGAGAAGTGTCTTGATGTGACCGAGGAGGATGGTGCATCATCCAACACACCAAGAGTGTGCACTTAAGCCAAGTCGAGGCATACGCAAGGTTCGAGAGAACGATGTGACACGAGGGTTGAAGATATGCTCGAAGAGGGCTGGGTAAGGCCCCTGGCAATAACCTCAAAGATGAAAGCTCGTCAAATTTGGTGTCAATTGGATACTCGAAGAATGATGCATGCGTATGACTGCTCGCAAAAGAAAGTCTACTCGATGAGAACCCAAATGGATGGATGTTTGAGGTGTCCCAATGAGATAATCAAAACATGGGTCAATTCCCAATGGATGTGTCCAAGCAAGCCAAGAGGGACGAGGTGTCCTGAGACATGTGATGACATCACGATGCATGGGTCGTGTTGTTGGAAACTGAGATGACGATGAGATGCGATGTGGTTTACAAGAGATCTTTATGAGTTAATAAGCTTGACTTAGCAAAAAGAAGTTATTACCAAGAACAATTTTAGGATAATTGTTTAGTTGTTATTGACTTGAATATGTTTAGAGAAATAGTTAGTTTTTTTTGTTGGAATTATTAGTAGTTGATTAATTTGAGAAGAAAGTTTAGAAAACTAGTTGTGTTTTCTCTAGCGTAAATACTCATGATATATATGTTATTTTCACAACAACATAGAGAATTGAAAAGCATAAGTGCTTAAGGTTACTTATTTCAAAAGCTCTCTCGCCTCGAGTTGTTCTTCCTACTTTAGCTATTTGTTTCGACATATTTCGATCGTGAGTCATTTTCAACAATTGGTATTAGAGTTAGGATGCCGAAACAATGTCATCACCATACAAAGTCACCTGAGGAGAAGTGACAATGATAAAGAGTGGAAGGGAGGCGAGTGTAACGCTCTGGTACCCGTTACTCATGAAGAGTAACTACGCAGCATGGTCGATAAAGATGCATGTTAACTTACAGGCACAGGGAATGTGGGACGCCATCGAGTATGGTGATGTTAAGGAGGTTGTTAGGATCACTCAACAACGTATACACTCGATCTAGATGAACACAAAGAATAGGATAGAGAAAATGGAAGGAGAATATTGGCTACAGAATTTGTATTGATGACTTCACGTATGTACAGTAAGAGAGAATATAAAGTACAGAAAATACATTTTCAAAGCTATGCCTGAGTGGATACATATATCGTTTAGCTTACTATATATAGTTTTACCAGATATAACTATCTATTATATATAACTATGTACCATATATAGCTTTACCAGATATAGCTTTTTACTACATACAACTATTTACTATTTATGACAATTTACTTTATATGTTATTTACCAAATATAGTTTTACTATGTATAACCATTAACTAAGCTATAAATAAGCATCAGGCTCCATAACCTAACAATTCTCCGACTTGTAGACTGATCCAGTCAACCAAGAATTTCATTCTCAAATGATCATGAGTATCTTCACTGCACTATACCAATTGAGGCTTTGCACAACCTCAATATTCCAACATCAACACATTTTGTAAACATGTTTGCTGGATTTTTTGCATCCTCTATCTTCTCCAAACACATCACCATCTTCCACTAACCTGTGAGTGAAATGGTATCGTCTTCTTTGTTTTGTCTTTAAATGATAGACTGGGTTCCTCACCAACTGTATGGCACTCTAACTATCTCTATAAAGAATATTTTCGTGCTGCTTCTTGCCCAATTCTTCCAGATAGTCAGTCATCCACATCGTCATCTTTTCAGCTTCACTTATTGCCATGTACTCAGCCTCAGTACAACGCATTTTTGAAGCCTAGACATCCCATCATTCATGGCTTGCTCTCACTTGGTTGTATCCTCCAACTGTAGGGCCTCATCAAAGGGCTCTGGTTCCCTTTCATCAGCAACAAATAGTGTAATGAAGATACATACATATCTGGTACTCTTATAGTATTGGATGATCTACTCAACACCGGTTCAGGTATCACTTGCTCGACCTCTGGTTCCTCTACAATAGTCTCAGGAGTTTCTTGAGTATCTGCTACAACATCACTAGGTGGTTTTTTTCCGCAACTCAACCTCAATTCCCACTTGCTTCGTTGTCTTAGAATCTTGCTCCACATCTGGTTCCTCGACAGTAATCTCAAGAGTTTCATGAGTATCTGCTACAACATCACTAGGTGAGTTTTCCTACAACTCAAGCTCAACTCCCACTTGCTTCGTTGTCTTAGAACCTTGCTCCACATCTGATTCCTTAGTAGTAATCTCAAGAGTTTCATGAGTATCTGCTACAACATCACTAGGTGAGTTTCCCTGCAACTCAAGTTCAACTCCCACTTGCTTTATGGTTTTGTAATTTTGCTCCACGACTGTATGGATCATTTCCAACCGCATTTTCTTCAATTCTCTGACAGTCCTTGTGAAGCTAACTCGTTTCTGCTTGCTTATAGCGTAGTTCTCACAACGACCCACATCAACAGATTTCAGACCTTCTAAAACTCCTTTCACATCCAGCATCTTCATTCTTTTCACGTTCATATCTCCAAGTCTATTGTGTCATAGACTAGAATTTGAAGCACTCTCAGCAACAGCAGCTATGTTCATACACCCTGTAGTGGTGTATAAGGTTCCAGATTTTGTGTCACGTGCTACCACCATAGCACCCTAAATAATCTTCCACGAACTCTTCCCTAACTCTGTTACATAACATGCGCTGTCCAACTGACCAATAGAGATCAAGTTTTTCTTGAGACTAGGAATATATCTGACATCTTTTAATGTTCATTGATTTTCTGCCGGAGTTTTTATGCAGACATCTTTTTTTCCTTTAATCTCCAAATCTTTGTTGTTGGCAAGATACACCTTCTCGAAATTTTCGGACTTAAAATTCCGGAACAACTCTTTATTTGGAGACGAATGAAAAGATGCACCTGAATCCAAAATCTAGGATTCAATCGAACTGTCCACGCTGAGGATTAGAGCATCCCCAATGTCTTCTGCTAAATTTATAGAATCATCATCTCCAGTTTTGTGATTCTGCTTCCTCTTTGGTCTTGTACAATCTGTCTGAAAGTGACAATTTTCTCCACAATTCCAACATGTTACTTTTGGTCTATTTGGAGATTTTTCTTAGTTCTTTGATTTTGATCACCCTTTGTTTGGGTCCTTCGGTTTACTTCTTCCCATTGGTCAACACTGAGAGCACTACCAGATGAATTTTCAATTTCTCGTTTGCGAATACTTTCGCTGAGAACTACATCCCAAATTTCATCAAACTTTAGTTTATCAGATCCTCGGAAACTTTTGATTGCAGTAACAATAGTATCCCATGACTTGGGTAAAGATGACATCAAAATCAATGCTTTAATTTCATCCTCGAAATTAATTTCCACTGAAGTCAGTTGACTTGCGATCATATTGAATTCATTTATATGATCAACAACAGATCCACCTTCAGACATCTGTATTTTGAACAATCTTCGCATCAAATACACCTTATTCATAGCCGAAGTTTTTCATACATATTCGACAGTGCCTTCAACAGATCCGACGTTGTTTTCTCCTTAATGATGTTGAATGCTACATTTCTGGATAGCGTCAACCGGATCAACCCCAAGGCTTGTCGATCCTTGAGCTTCCACTGTTCCGTGGTCATGGTATCCGGCATCACCCCCAACAGGGGTTCGTGAAGACCTTTCTGATACAGATAATCTTCAATCTGCATCTTCCAGAAACCAAAATCGGATCCATCGTACTTCTCAATTCCAATCTTTAAACTTTTCATCTCACAGATCGTGGTGACTTCCGCCTAGCTCTGATACCAGTTGTTAGGATCGCACAACAACGTACACACTCGATCTAGATGAACACAGAGAATATGATAGAGAAAATGGAAGGAGAATATTGGCTACAAGATTTGTATTGATGACCTCACGTATGTACAGTTAGAGAGAATATAGAGAATACAGAAAGTACATTTTCAAAGCTCTGCTTGAGCGGATACATATATGGTTTAGCTTACTATATATAGCTTTACTAGATATAACTATCTACTATATATAACTATATATCATATATAGCTTTTTACTATACATAGCTATTTACTATTTATGACAATTTACTTTATATGTCATTTACCAAATATAGCTTTACTATGTATAATCATTGACTAAGCTATAAATAAGCATCAGGCTTCCTAACCGAACAGAGGTAAGGACAAGATGGCTCTTGCTGGGGAAGGACTCAGCGAAAGAAGGACGTTCTTCTCATGTTGGGAAAGAAGGACTTAGCGAAGGCAGCATGAGAGATGCTGCAAACAATGCATGTGGGTGTGGAATGTGTCAAGAAAGTAAAGGTGCAAACCTTGAAGAGTGAGTTTGTGGCTATCTAAGAACGGTGAGTCAATAGACAACGATCATCAACGACATTCATTCATTAGGCGACGTGATGGAGGAGATCTCCGTCATTAAGAAGTTCCTTCGAGCTGTTTCCTTAAGATTCATGTAGATTGTTACCTCCATCGAGTAGTTCGGCGACCTCAAGAACATTTCGATTAAGGAGGTCGTTAGTCATCTTAAGGTCCATGGGGTGAGACTTCGTGGCTACGAAGACAAAGAGGAGGAAAAATACCTCTTACATATACATGAGGAGTGGCTCGCACGAACGAAAAAGAAAGATGCAGATGATTCTTATTTTTCAGGTACAAGCGGACGTGGCAGCCATAACAAAGAAAAAAGAGGTCGTGGACGTTTTGACAGATAAGGTCGTGACAATACTTCACAAACCCATGAAAATGGCAATCCTTGAAAGGACAAGAGTATAATCAAGTGTTATTCTTGGGAAAAATATGGGCATTATGCGGCAGAGAGCTGTAACAAGGAGTGCGATGAGGAGGAAAACCTCCTGTTCTTGGATGATGATGAACCTACATTAATGTTGACCGAGAAAATGCTCAACCTGTTGATACTCAATGAAGATAAAGTTATGGAAAACCCTTCATAGATGGAGAAAACCAAGTGGAGACTAGCATGTGGTACCTAGACAACGGAGCGAGCAACCACATGATTGGAGATCGAGCAAAGTTTAAGGAACTTGATGAGAAGTTCATTGGAAACCTAAAACTTTACGATGGATTCATTGTACTGATCCAAGGAAAAGGAATTATCTTGTTTCAGTGTAAGAATGACAATCAACGTCATTGACCAAGGTGTATTACATTTCGAGTTTGAAGAGAAATATTATTAGCTTTGGTCAAATCATAGAAGAAGGTAGCAGAATGGAGATAGTCGACCCAGTCCTTAAGATATACGACCGAAATGGAGCCCTATTGATGAAGGTAAAACGGTTGCGAAACCGCATGTATAAGATACTATTGAAAGACTATCAACATCTTCCAAAATATCTATTGGCATTGGCTGCAAGAAAGTGAAGAAGAAACCAAGGGTCAGAAGAAAAGATAGCGAAAAATAGATCCAAGAAGCAACCAGAGGTTGCTCCAATCAGCGAAGTGAAACCTACAAGTTGATGTGTTTCATCAAAATTATCATCTCAACCAAAGAGACCTAGAGGAAGAACACCAAGGCGTAACAGAAATGAGACTTCAAACTTGTCATCTCAATCAAAGAAACCTAGAGACAGGCCTAAAAAGAAGATTGAAACACGAAGGAGTACATTACAAGAATTTTCTACATGTAAGCTTGATGATAAATTCTCTCTACATAAGAGGGTGGAAAAAATTGCAGGTTGCAAAATTAAAATTTCTTCTGAAGAAGACAGAGTTGACCAGGGACCAAACAAAGTTGAAACTAGAGAGTAACATGCAGACATTCTCACCAAGAGCCTAACAAGGGTTGAATTTGTAGACATGCGAGAGTTGCTCAAAGTGAAGAATCTCGATTAAAGTCAAGCTTAAGAATGTGAGTTAATAAGGTTGAATTAGCAAAATTAAATTATTATCCTATTAACAATTTTAAGATAATTGTTTAGTAGTTACTGACTTGAAATAGTTTAGAGAAATAGTTAGTCTTTTGTTGAGGAAAATTGTTAGTAGTTGCTTGGGGAGAAAGTTAAGGAAACTAGTTGTTTCCCTGTGATTTTACTTAGTTTAAATAAAATCTAACTTTGTGTGGAACTCTTTTGCTTTAGAATAGGACTTTAACTTTTAGAAGTCAGCCGTAGACTCCTTATTTGTTTTTTCTGTTTTGTTGTATATCCTCCTATTTTCCATTTCAATTATAGAGCATTTTTTCTTCAAAAACTTACTTTTCTATGCTGTTATTTCTTTAGTTTCATCATTTGGTATCAGAACCATAGCGAGGGATCTTATTAAAATTTGAAATAGCAATCTTCAAGATGTCTACAGAAAGCTCTTTTGTGTAGCTAGTCATCCCACAGTTTGACGGGCATTATGAACACTCAACAATGCTCATGGAAAACTTTTTGTGATCAAAGGAGTATTGGAATTTAGTAGAAAATGGAATTTATGCAGCAGCAGGAGGATCTACTGATGCACAATAGAAGAATATGTTAGATAAATCCCTAGGTTAAAAATCATTCCTATTTTTTATGTTACTATTTTGTAGTTAACAGCAGAATTAAAGTTAGTGGGATTCACAAGTCGAGTGGAATGATTCAGTTGCCATTTTCTTCTCTATTATTAGGATAGGCTGTTATTTAAATACGTCGATTGAACGACAAACAATCCATCTTCAGCACAGAATAAAACTATTTTCTCTCTCTGTCTTGTGTTTTCTGTTATTTTCTTCTTCAATCAATTTCGGCTTTTCCCTCGTCAACGTTTTCCTCCTCAGTCAACCAGAGCCGAGGTTCGTGACATATCATTGTGGAGAAACCAAGTCTATAAAAAGCTAGAATAGCTCAATTGGTTAGAACATTGACCTAACAACACACAGATCTCAGGTTCAAGTAGAAGAGAATGCAAAGCGCGAAAATACGGTAGAAGAGAATGGGTGACATGGGAGAATTCAAGAGAAGGTCACGGCGAGATGAGCCGTTTATCATCACGATAGGTGTCAAGTGGATGTGCAGTGATGTATGCAGCTCAGGCATCCTAACAGATCGGTAGACTTGAACCTTGTTCCTACATGACCTACTGTAGGAGAGGTCCTGCGAAAAATAGCTCGAGGCCAGGATGATAAAAAGCTTAACACCTCTAATTCTTATTACTTTTCAATATTCAATATGGAAAAAAAAAATGAAAAGGTCGTCTTATTCAAAACCCCTTCTCTCCCACTTTTCTCTCTCACTTCACACCTTGGAACGCACTGTTCTTATAGAGAGGTGCTTTCGCATTTTCTTAACCCAAAATAGCAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTAGGGTACCCCCGGGAACAGATCCAGTGGAGACGGGGAGGTGCTTTCGCATTTTCTTAACCCAAAATAGCAAATGGCTGGGGAGAGGAAAGGTTCCTTTTTTTAGGGTACCCCCGGGAACAGATCCAGTGGAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCAATATGGGGTCAAAAAGCCAAAATAAATGATTTTAGCCCTTATAAAAAGAAAACTGATTCTTGAACCCCTTTCACGCTCATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATTCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAAGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATATAGACACATAGGCCCATGGATCCATACATCTCGATCGGAAAAGAATCAATAGAAAAAGAAAGAATCGGAATTGATCGATATATTTCTCGAAACAAACGAAAAGGAAACGAAAGACGAAACATAAATCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGGGATTCCGTAAATATTCCATTCCAAAAAGAGAAAGTTCGAAACAATTGGGATTTTTTTGGAGATTGGATGCAGTTACTAATTCATGATCTGGCATGTACAGAATGAAAACTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATTTGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCAGATATACCTTGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAATAGTAAATGGTCTTCTCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTATATGGTTACTTGAGACGGACGGAACTCCGGAACCTTTAGAGAATGGGTGA

mRNA sequence

ATGGAGAACAGTTTTGCAGAACTAAAACAAGTAAATTGGCTAGAAGTAACTGGTTCAACATCGGAAAAAGTTGAGGTTGGGAAATGGTTCAAAGTGAGTTTCAATGTGACACTACGACCCAATGCTTTTGGATGGGATGAGTCTAATATTTACATAATGGCTAAGATTGGGAAAAAGGGGCGTTTCAGTTTCAAGAAACTGAATCTTCGTAATAAAAATCCAGACGAAAGATTTAACATTCCCCAGAATGAATTAAAAATTGAAGTTGCCAAATCCGCTGAGGATCCCATTCTCTACTTTGGTATGTATGAAGTTTGGAGCAACAGATGGAAAGGAGGGTTGAGGATCCATCATGCACTCGTTGAGGAGTGCGAGGCACCAAAAGAGAAAAAATTGCTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAAGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAATAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAATAGTAAATGGTCTTCTCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTATATGGTTACTTGAGACGGACGGAACTCCGGAACCTTTAGAGAATGGGTGA

Coding sequence (CDS)

ATGGAGAACAGTTTTGCAGAACTAAAACAAGTAAATTGGCTAGAAGTAACTGGTTCAACATCGGAAAAAGTTGAGGTTGGGAAATGGTTCAAAGTGAGTTTCAATGTGACACTACGACCCAATGCTTTTGGATGGGATGAGTCTAATATTTACATAATGGCTAAGATTGGGAAAAAGGGGCGTTTCAGTTTCAAGAAACTGAATCTTCGTAATAAAAATCCAGACGAAAGATTTAACATTCCCCAGAATGAATTAAAAATTGAAGTTGCCAAATCCGCTGAGGATCCCATTCTCTACTTTGGTATGTATGAAGTTTGGAGCAACAGATGGAAAGGAGGGTTGAGGATCCATCATGCACTCGTTGAGGAGTGCGAGGCACCAAAAGAGAAAAAATTGCTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAAGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAATAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAATAGTAAATGGTCTTCTCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTATATGGTTACTTGAGACGGACGGAACTCCGGAACCTTTAGAGAATGGGTGA

Homology

[Close]

BLAST of CmoCh18G005310 vs. Swiss-Prot
Match: NU2C2_CUCSA (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Cucumis sativus GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 7.7e-106
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. Swiss-Prot
Match: NU2C1_CUCSA (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 7.7e-106
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. Swiss-Prot
Match: NU2C1_VITVI (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Vitis vinifera GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-105
Identity = 195/202 (96.53%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGL+NTQMYNSPGISIALI++
Sbjct: 215 VNGLINTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. Swiss-Prot
Match: NU2C2_MORIN (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Morus indica GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-105
Identity = 195/202 (96.53%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGL+NTQMYNSPGISIALI++
Sbjct: 215 VNGLINTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. Swiss-Prot
Match: NU2C2_VITVI (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Vitis vinifera GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-105
Identity = 195/202 (96.53%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGL+NTQMYNSPGISIALI++
Sbjct: 215 VNGLINTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. TrEMBL
Match: W8E723_9ROSI (NADH-quinone oxidoreductase subunit N OS=Cucumis hystrix GN=ndhB PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.6e-104
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. TrEMBL
Match: A0A0S2IEN6_9ROSI (NADH-quinone oxidoreductase subunit N OS=Cucurbita ecuadorensis GN=ndhB PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.6e-104
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. TrEMBL
Match: G3ETU2_CUCME (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Cucumis melo subsp. melo GN=ndhB PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.6e-104
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. TrEMBL
Match: A0A0S2IG27_CUCPE (NADH-quinone oxidoreductase subunit N OS=Cucurbita pepo subsp. fraterna GN=ndhB PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.6e-104
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. TrEMBL
Match: A0A120L1M6_GYNPE (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Gynostemma pentaphyllum GN=ndhB PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.6e-104
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. TAIR10
Match: ATCG00890.1 (ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-56
Identity = 107/113 (94.69%), Postives = 112/113 (99.12%), Query Frame = 1


Query: 333 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 392
           MAITEFLLF+LTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD+RSNEAT KY
Sbjct: 1   MAITEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKY 60

Query: 393 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISIALIWL 446
           LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGISIALI++
Sbjct: 61  LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFI 113

[Close]

BLAST of CmoCh18G005310 vs. TAIR10
Match: ATCG01250.1 (ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-56
Identity = 107/113 (94.69%), Postives = 112/113 (99.12%), Query Frame = 1


Query: 333 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATTKY 392
           MAITEFLLF+LTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKD+RSNEAT KY
Sbjct: 1   MAITEFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKY 60

Query: 393 LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLLNTQMYNSPGISIALIWL 446
           LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGL+NTQMYNSPGISIALI++
Sbjct: 61  LLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFI 113

[Close]

BLAST of CmoCh18G005310 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 215.7 bits (548), Expect = 6.0e-56
Identity = 111/117 (94.87%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 130 KKLLNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARR 189
            +L+NMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLSVLRQAIRGVTPDIAVKARR
Sbjct: 20  NRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARR 79

Query: 190 VSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIQ 247
           V GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAI+
Sbjct: 80  VGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIR 136

[Close]

BLAST of CmoCh18G005310 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 215.7 bits (548), Expect = 6.0e-56
Identity = 111/117 (94.87%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 130 KKLLNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARR 189
            +L+NMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLSVLRQAIRGVTPDIAVKARR
Sbjct: 20  NRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARR 79

Query: 190 VSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIQ 247
           V GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAI+
Sbjct: 80  VGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIR 136

[Close]

BLAST of CmoCh18G005310 vs. TAIR10
Match: AT1G31200.1 (AT1G31200.1 phloem protein 2-A9)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-23
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 1


Query: 6   AELKQVNWLEVTGSTSEKVEVGKWFKVSFNVTLRPNAFGWDESNIYIMAKIGKKGRFSFK 65
           AELK V+WLEVTGS  +K+E GK +++ F ++ +P+A GWD++ +++ AKIGKKG+  +K
Sbjct: 52  AELKMVSWLEVTGSF-DKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWK 111

Query: 66  KLNLRNKN------PDERFNIPQN-----ELKIEVAKSAEDPILYFGMYEVWSNRWKGGL 124
           ++   ++N        E  NIP       E+ +      +D  L FG+YEVW+ RWK GL
Sbjct: 112 RIKSVSQNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGL 171

[Close]

BLAST of CmoCh18G005310 vs. NCBI nr
Match: gi|1002166161|ref|YP_009236336.1| (NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. NCBI nr
Match: gi|68164848|ref|YP_247644.1| (NADH dehydrogenase subunit 2 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. NCBI nr
Match: gi|317046217|ref|YP_004072506.1| (NADH dehydrogenase subunit 2 [Corynocarpus laevigata])

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. NCBI nr
Match: gi|1002166160|ref|YP_009236322.1| (NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

[Close]

BLAST of CmoCh18G005310 vs. NCBI nr
Match: gi|590000471|ref|YP_009004100.1| (NADH-plastoquinone oxidoreductase subunit 2 [Cucumis hystrix])

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1


Query: 246 QCILIFGLILLLMIDSTSDQKDIPWLYFISST--IMSITALLFRWREEPMISFSGNFQTN 305
           +CILIFGLILLLMIDSTSDQKDIPWLYFISST  +MSITALLFRWREEPMISFSGNFQTN
Sbjct: 35  ECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLFRWREEPMISFSGNFQTN 94

Query: 306 NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 365
           NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV
Sbjct: 95  NFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFV 154

Query: 366 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 425
           APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI
Sbjct: 155 APECFSLCSYLLSGYTKKDVRSNEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEI 214

Query: 426 VNGLLNTQMYNSPGISIALIWL 446
           VNGLLNTQMYNSPGISIALI++
Sbjct: 215 VNGLLNTQMYNSPGISIALIFI 236

The following BLAST results are available for this feature:

BLAST of CmoCh18G005310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU2C2_CUCSA	7.7e-106	97.03	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Cucumis sativus GN=...	[more]
NU2C1_CUCSA	7.7e-106	97.03	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus GN=...	[more]
NU2C1_VITVI	1.3e-105	96.53	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Vitis vinifera GN=n...	[more]
NU2C2_MORIN	1.3e-105	96.53	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Morus indica GN=ndh...	[more]
NU2C2_VITVI	1.3e-105	96.53	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Vitis vinifera GN=n...	[more]

BLAST of CmoCh18G005310 vs. TrEMBL


Match Name	E-value	Identity	Description
W8E723_9ROSI	8.6e-104	97.03	NADH-quinone oxidoreductase subunit N OS=Cucumis hystrix GN=ndhB PE=3 SV=1	[more]
A0A0S2IEN6_9ROSI	8.6e-104	97.03	NADH-quinone oxidoreductase subunit N OS=Cucurbita ecuadorensis GN=ndhB PE=3 SV=...	[more]
G3ETU2_CUCME	8.6e-104	97.03	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Cucumis melo subsp. m...	[more]
A0A0S2IG27_CUCPE	8.6e-104	97.03	NADH-quinone oxidoreductase subunit N OS=Cucurbita pepo subsp. fraterna GN=ndhB ...	[more]
A0A120L1M6_GYNPE	8.6e-104	97.03	NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Gynostemma pentaphyll...	[more]

BLAST of CmoCh18G005310 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00890.1	2.7e-56	94.69	ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01250.1	2.7e-56	94.69	ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01240.1	6.0e-56	94.87	ATCG01240.1 ribosomal protein S7	[more]
ATCG00900.1	6.0e-56	94.87	ATCG00900.1 Ribosomal protein S7p/S5e family protein	[more]
AT1G31200.1	3.9e-23	41.86	phloem protein 2-A9	[more]

BLAST of CmoCh18G005310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1002166161\|ref\|YP_009236336.1\|	1.2e-103	97.03	NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Gynostemma pentaphyll...	[more]
gi\|68164848\|ref\|YP_247644.1\|	1.2e-103	97.03	NADH dehydrogenase subunit 2 [Cucumis sativus]	[more]
gi\|317046217\|ref\|YP_004072506.1\|	1.2e-103	97.03	NADH dehydrogenase subunit 2 [Corynocarpus laevigata]	[more]
gi\|1002166160\|ref\|YP_009236322.1\|	1.2e-103	97.03	NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Gynostemma pentaphyll...	[more]
gi\|590000471\|ref\|YP_009004100.1\|	1.2e-103	97.03	NADH-plastoquinone oxidoreductase subunit 2 [Cucumis hystrix]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001750	ND/Mrp_mem
IPR005717	Ribosomal_S7_bac/org-type
IPR023798	Ribosomal_S7_dom
IPR025886	PP2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015935	small ribosomal subunit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0015992	proton transport
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006412	translation
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G005310.1	CmoCh18G005310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 355..446 score: 4.0
IPR005717	Ribosomal protein S7, bacterial/organellar-type	TIGRFAMs	TIGR01029	TIGR01029	coord: 129..246 score: 2.8
IPR023798	Ribosomal protein S7 domain	GENE3D	G3DSA:1.10.455.10		coord: 130..246 score: 1.1
IPR023798	Ribosomal protein S7 domain	PFAM	PF00177	Ribosomal_S7	coord: 128..246 score: 7.9
IPR023798	Ribosomal protein S7 domain	unknown	SSF47973	Ribosomal protein S7	coord: 129..246 score: 2.75
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 4..118 score: 2.0
None	No IPR available	PANTHER	PTHR22773	NADH DEHYDROGENASE	coord: 246..445 score: 3.2E
None	No IPR available	PANTHER	PTHR22773:SF84	SUBFAMILY NOT NAMED	coord: 246..445 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G005310	Lsi02G010370	Bottle gourd (USVL1VR-Ls)	cmolsiB356
CmoCh18G005310	Cp4.1LG09g06830	Cucurbita pepo (Zucchini)	cmocpeB377
CmoCh18G005310	CsaV3_1G046610	Cucumber (Chinese Long) v3	cmocucB0462
CmoCh18G005310	Bhi08G000746	Wax gourd	cmowgoB0530

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G005310	Cucumber (Chinese Long) v3	cmocucB0465
CmoCh18G005310	Watermelon (97103) v2	cmowmbB377
CmoCh18G005310	Cucurbita moschata (Rifu)	cmocmoB170
CmoCh18G005310	Cucurbita maxima (Rimu)	cmacmoB223
CmoCh18G005310	Cucurbita maxima (Rimu)	cmacmoB407
CmoCh18G005310	Wild cucumber (PI 183967)	cmocpiB390
CmoCh18G005310	Cucumber (Chinese Long) v2	cmocuB387
CmoCh18G005310	Melon (DHL92) v3.5.1	cmomeB357
CmoCh18G005310	Watermelon (Charleston Gray)	cmowcgB340
CmoCh18G005310	Watermelon (97103) v1	cmowmB373
CmoCh18G005310	Watermelon (97103) v1	cmowmB377
CmoCh18G005310	Cucurbita pepo (Zucchini)	cmocpeB403
CmoCh18G005310	Cucumber (Gy14) v2	cgybcmoB090
CmoCh18G005310	Melon (DHL92) v3.6.1	cmomedB409
CmoCh18G005310	Silver-seed gourd	carcmoB1283