CmoCh18G001380 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTTAATTACCCATCATCCTCAGGTATTTGAGAAATCATAAAGTAAACTCTTTGAATTTCAAGTGAATAAATTCTCGTTTTTCATGCCATGAACGTCTGGATGTATTTCAGGTCATATTTGTGAAAGGGAGTGCCTCTCATTTGCTTGTTTAGCATGTAACTGTTTTCATTATAAATAAAAAGGCTTAAATAGAAAAACTAATGGGAACTGTATTTCAATGTCTCTAAAGAAATCGGTCCTTGGGTAAGAAAACAACCATTTTGTACGAATGAGTTTTTAGATAGTCATGAAGAAATTTTCAAACTCGTATGTATCAATTGGCTAAAAAAACTATTATTTACTCTTATTCATCTAGATATTGGCTTCCATATGTGTCTGATTTTATTCCCACATTTTACTTTTCCTTGGCCGTTTGCAATCCTCATTGTCTACAACCTTGCTCGTGTTGTAGGGTTCTTATGCAGAATTTTTATCAAGATTTTCGTCCTGGAATGGTTCTTTGAAGCTAAAACAGTATGTAACATCTGTTCGCACAGCTAGGGGAGATGAACATTGCACCCCATTAAGGAGCAATGTTTGTTTAAGGTAAGGGCTTTGAAAATCTCTTCAGCTTTTTGTTTTTTTTGGACATTGTTTCTCTCAGTTTTCTTTTCTTGTCTCAGTTGTCCATTTTCTTTAAATCTCTAAACCACTCTCAAATTTTAAAAGTTAATATTGAACTAAATTTGAACCTCAAGCCATGTTCATCATAGTTGAAAGATCATTAGAGATTGTCAGAAAGGCATTCTACTCACTTTGTCAGTCACGAACTTTGTCACTAAAGTGACCCCCAAGGGACAGCGCTGTTGGGTGAGACATGGGTCTTTGAGTTTCACCTACCCAGAAGTCATGTTTTCAAACCTTCGAGTGATCTTAATAAGAAAATTCCTCATTTCTTAAGTTCAGGCCAAAGGACGGGCGCACCCAAATTAGTAAGGTTGGGGCCCTTGATGCTGGGTTATCAAAGAAAAACTTCTGTGACTGAAGTTAACATTTTCATGTTGTCAAATTTCTGTGCCATATTTTATTAGGTGATTAGTCTATCATGCTGCTTGTTGCCTATATACTTCGGGATACATTTACGCTGAAAGTACACAATTTCCTGTTCTTGTAATATTGAGATGATTTTTAACTTGAGTGTTGAATTGAATTAATCTAGTCATATAGCTTACCTTCCCTTGAAGTTTCTCTTTTGTTCATGGGGATCCTTGTTCATCATGAACAATGGTGTTGTGCTTGCCCCTGAAGTCTCTCTGATGTGCTGTATTCTTGTATCATATATAAACTATGTTGTGTATCCTTGACCCAAAACTCATGGAGCTTATTTTCAGTGTAGGGACTCCTCGATTATATGGACCAAGACCTAATCTCTTGAGAGTTTCGGCCTTCAAAAGCAGTGCTCGTATAGATGATGGGACAGGTGGGGTAGCAAATGGATCTAAGATTCCCAACTACCCTGTAAAGTTTAAAGATGATGATTGTTGTACAGAAACTCCAAAGGCAAACAATGTTCCACTTTGCTATGCCTCTGGAGCAAATGAGGATATTGCTCCATCTCCTGCAATTCAAAATTTGTTCAAGAAATGGTTGGAATTGTTGCGCAGACAACCCGTAGGTAAAGATGTGGATGAAATTCTAGAGGATCTGCCCTCGGCAGGGATGTCAGATATTCAGCAGGAGTCCAATAAAAAGAAAAGCAATGAGATTTTGCGAGGTGTTTGGTTCCATTTTTGGGGACTTAATGCAGCAGTGAAGATACCTTTGCTCGTATTGTAAGTAGCTATTTACTTGTTTACGTATGCTCCTTGAACTTGGTTTTGATTTTATCTCATTGTTAAGCAAGGACTCAACACTATTATCTATTTGAAGCTGTAGAGTATTGATGTTCCCTTATTTAATGAGAAATCAAGCTTTGACTAAGACAAGGGAAGAATTCCAAAGGTTAATAAAAAAAGGGAATAGCCCAGTGCCCACCACCACCACAATAGGAGCCTGAACAAAGAAATAAAATGTTGCAAAAAATGCTCCATTTATCAATGTTAAAGGTAAAGGGTAATTACAGAACTCTTTGGTAAAATTTGTCAAAAGGAACTCTTTCGTAAAAGCCAGCCAAAGTGAGGCATTCAACCTAGTTATAAATTACACCTCCCTCTAAGGGCTTTCAACTCTCTGAGAATTCTTCGCCAAATATCCCACCAAATGTTCCACAAAATAGCCTGAACGGTTGCATGCACAAGGAAACCATACTATCCTAGTCCCAAAACAGCAGATGAAGCATCTCCTCCCATGATCTATTACAAGCCTAGCACGCCAAAAGTCTTAGGGAAGAAAAAATCTCTCTTATTGAAGTCGTGAGATGACACTCTCATAATACACGATCCAAAACCTCAAGACATTTGCTTAAGACACATGACTAAGGCCTTAGCAGCGTAGAAGAAGACATTTTAATGAAAATCAATAATGTTAAGCCTCCCATGTAAGACCTACCGGACAAAGAGTTTGCCTTTCTTGGTGTCTCTAACCTTTCACAATAAATAAAACAAAGACTTGGGTTGATGGGAACAATCGAATGAAAAATGAACTACACGAGAATGACCGAGATGTCTCGAATGAAGCAGAGGGTTTGAATCATCTTACTTTTTTTATGACTATCATTATTTGTAGGTTCATCCAATAGAAGGAGAGAGAAAAAGGGAAAGTTCAATTTATCTTGCTGTTGTTGTGAACAAAGAAAACACAATCTATCGTTGATAATGGAATAAGTTATAAGCAAAAATGTTGAATTTCCCAATAGGAGTTCACACAAAGGCTCCTGAATTTAAAAGGATGAGTAAGTACTTAAAGAATATGAAATCTTACACCATCAGCTTCTTGTTGTTTCTTAACTATAAAAAGACTTTAAATTTCATTCAACTTTGTAATTCTTCCCCACCCCTTCCCTGCTTCATAAGTTGTTAGTCCTTGGTTATCTTAGAAGGATTTAATGCTAGATTTATGTAGTTATGTGCAACTTCGTAGCACTATGAATAACAAGAACAAGCTTGCTCGTGTCAGTGATATTAAAATGTAAATGCGGTGGGGATGTTTTCCCATTTTGAGTAGGAACAGAAAGTCTCATTCTCATCACATTTACATTTTCGACTAATGATATTAGTATGCTTCTCCTTACTTTTCATAAGTACGAATGAATTATGACTAGAATATATATGCTCGGCCATACAATCGTCTCTTCCACGTGCAATGTCACATATGAATTCTTTTATAACTGTGACTGTCATGATATAGTTGAATGCTTCTTTATCATCCATATTTTATGCTAGTGCCTGTCTTGAATCTTTTTATATTTATTATTCTCAATGCCGTTCTTTTTCTCAGTGTTCCTATGTACCTGGTGATCAACGTGTTTTATGGTGCTGAAGTTTCAAGAGAATTGACTCCTCTCTGGGTTTTTGGGCCCTTCATTACTGCTTTCTACGTTAAGATGTTTCTCTGGTTGAGTTCCCTCTATATCTTCAGCTTTAAGTTGACTGCTAAACTAGTAAGGAACTCCCCCACTTACTACCAGACAGTGCATCACTATGTGATACAAGGGAAACTTAAAGAAGAGTTCGTAGCTCGTTTCTTGCAACCGATAGTCAACATTAAGAATCTAAAGAACAAAGAACTATTGCTAAGAAAGCTCATGGAGTTAAGAGAGTGGATTGTCGATAAGTACCTTGATTTTGTGGAATTAATTTGGCCATACTACTGCCGAACAATCAGGTTTTTAAAGAGAGCTAATCTGATTTAGACTATGGTTTGTATTTTGAAGCAAATCTCTTACCAAAATCGAAGGCTGGATGGATCCTGTTTCTTTCTCACATTATCTAAGAAGCTTGATTTGCCATTAAAGCATGTCTGGCCTTCCACTTTTTGTGGGAGTATATTAGTGTTTAATGAGCTAAGCAAGGATCAGAATGACTTGAGTTGTCTGATTTTGTGA ATGGCCTTAATTACCCATCATCCTCAGGGTTCTTATGCAGAATTTTTATCAAGATTTTCGTCCTGGAATGGTTCTTTGAAGCTAAAACAGTATGTAACATCTGTTCGCACAGCTAGGGGAGATGAACATTGCACCCCATTAAGGAGCAATGTTTGTTTAAGTGTAGGGACTCCTCGATTATATGGACCAAGACCTAATCTCTTGAGAGTTTCGGCCTTCAAAAGCAGTGCTCGTATAGATGATGGGACAGGTGGGGTAGCAAATGGATCTAAGATTCCCAACTACCCTGTAAAGTTTAAAGATGATGATTGTTGTACAGAAACTCCAAAGGCAAACAATGTTCCACTTTGCTATGCCTCTGGAGCAAATGAGGATATTGCTCCATCTCCTGCAATTCAAAATTTGTTCAAGAAATGGTTGGAATTGTTGCGCAGACAACCCGTAGGTAAAGATGTGGATGAAATTCTAGAGGATCTGCCCTCGGCAGGGATGTCAGATATTCAGCAGGAGTCCAATAAAAAGAAAAGCAATGAGATTTTGCGAGGTGTTTGGTTCCATTTTTGGGGACTTAATGCAGCAGTGAAGATACCTTTGCTCGTATTTGTTCCTATGTACCTGGTGATCAACGTGTTTTATGGTGCTGAAGTTTCAAGAGAATTGACTCCTCTCTGGGTTTTTGGGCCCTTCATTACTGCTTTCTACGTTAAGATGTTTCTCTGGTTGAGTTCCCTCTATATCTTCAGCTTTAAGTTGACTGCTAAACTAGTAAGGAACTCCCCCACTTACTACCAGACAGTGCATCACTATGTGATACAAGGGAAACTTAAAGAAGAGTTCGTAGCTCGTTTCTTGCAACCGATAGTCAACATTAAGAATCTAAAGAACAAAGAACTATTGCTAAGAAAGCTCATGGAGTTAAGAGAGTGGATTGTCGATAAGTACCTTGATTTTGTGGAATTAATTTGGCCATACTACTGCCGAACAATCAGGCTGGATGGATCCTGTTTCTTTCTCACATTATCTAAGAAGCTTGATTTGCCATTAAAGCATGTCTGGCCTTCCACTTTTTGTGGGAGTATATTAGTGTTTAATGAGCTAAGCAAGGATCAGAATGACTTGAGTTGTCTGATTTTGTGA ATGGCCTTAATTACCCATCATCCTCAGGGTTCTTATGCAGAATTTTTATCAAGATTTTCGTCCTGGAATGGTTCTTTGAAGCTAAAACAGTATGTAACATCTGTTCGCACAGCTAGGGGAGATGAACATTGCACCCCATTAAGGAGCAATGTTTGTTTAAGTGTAGGGACTCCTCGATTATATGGACCAAGACCTAATCTCTTGAGAGTTTCGGCCTTCAAAAGCAGTGCTCGTATAGATGATGGGACAGGTGGGGTAGCAAATGGATCTAAGATTCCCAACTACCCTGTAAAGTTTAAAGATGATGATTGTTGTACAGAAACTCCAAAGGCAAACAATGTTCCACTTTGCTATGCCTCTGGAGCAAATGAGGATATTGCTCCATCTCCTGCAATTCAAAATTTGTTCAAGAAATGGTTGGAATTGTTGCGCAGACAACCCGTAGGTAAAGATGTGGATGAAATTCTAGAGGATCTGCCCTCGGCAGGGATGTCAGATATTCAGCAGGAGTCCAATAAAAAGAAAAGCAATGAGATTTTGCGAGGTGTTTGGTTCCATTTTTGGGGACTTAATGCAGCAGTGAAGATACCTTTGCTCGTATTTGTTCCTATGTACCTGGTGATCAACGTGTTTTATGGTGCTGAAGTTTCAAGAGAATTGACTCCTCTCTGGGTTTTTGGGCCCTTCATTACTGCTTTCTACGTTAAGATGTTTCTCTGGTTGAGTTCCCTCTATATCTTCAGCTTTAAGTTGACTGCTAAACTAGTAAGGAACTCCCCCACTTACTACCAGACAGTGCATCACTATGTGATACAAGGGAAACTTAAAGAAGAGTTCGTAGCTCGTTTCTTGCAACCGATAGTCAACATTAAGAATCTAAAGAACAAAGAACTATTGCTAAGAAAGCTCATGGAGTTAAGAGAGTGGATTGTCGATAAGTACCTTGATTTTGTGGAATTAATTTGGCCATACTACTGCCGAACAATCAGGCTGGATGGATCCTGTTTCTTTCTCACATTATCTAAGAAGCTTGATTTGCCATTAAAGCATGTCTGGCCTTCCACTTTTTGTGGGAGTATATTAGTGTTTAATGAGCTAAGCAAGGATCAGAATGACTTGAGTTGTCTGATTTTGTGA
BLAST of CmoCh18G001380 vs. TrEMBL
Match: A0A0A0LQY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046220 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 6.8e-131 Identity = 242/330 (73.33%), Postives = 268/330 (81.21%), Query Frame = 1
BLAST of CmoCh18G001380 vs. TrEMBL
Match: M5WUS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008249mg PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 3.3e-93 Identity = 179/332 (53.92%), Postives = 233/332 (70.18%), Query Frame = 1
BLAST of CmoCh18G001380 vs. TrEMBL
Match: F6GSL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g08790 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 9.3e-88 Identity = 173/336 (51.49%), Postives = 228/336 (67.86%), Query Frame = 1
BLAST of CmoCh18G001380 vs. TrEMBL
Match: W9RU16_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014579 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84 Identity = 170/332 (51.20%), Postives = 218/332 (65.66%), Query Frame = 1
BLAST of CmoCh18G001380 vs. TrEMBL
Match: A0A067K7Q7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11444 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.5e-82 Identity = 167/337 (49.55%), Postives = 217/337 (64.39%), Query Frame = 1
BLAST of CmoCh18G001380 vs. TAIR10
Match: AT5G63050.1 (AT5G63050.1 embryo defective 2759) HSP 1 Score: 260.8 bits (665), Expect = 1.3e-69 Identity = 149/341 (43.70%), Postives = 202/341 (59.24%), Query Frame = 1
BLAST of CmoCh18G001380 vs. NCBI nr
Match: gi|659067278|ref|XP_008438592.1| (PREDICTED: uncharacterized protein LOC103483645 isoform X2 [Cucumis melo]) HSP 1 Score: 538.1 bits (1385), Expect = 1.2e-149 Identity = 261/330 (79.09%), Postives = 289/330 (87.58%), Query Frame = 1
BLAST of CmoCh18G001380 vs. NCBI nr
Match: gi|659067276|ref|XP_008438584.1| (PREDICTED: uncharacterized protein LOC103483645 isoform X1 [Cucumis melo]) HSP 1 Score: 533.1 bits (1372), Expect = 3.9e-148 Identity = 261/332 (78.61%), Postives = 289/332 (87.05%), Query Frame = 1
BLAST of CmoCh18G001380 vs. NCBI nr
Match: gi|449469551|ref|XP_004152483.1| (PREDICTED: uncharacterized protein LOC101204576 [Cucumis sativus]) HSP 1 Score: 475.3 bits (1222), Expect = 9.8e-131 Identity = 242/330 (73.33%), Postives = 268/330 (81.21%), Query Frame = 1
BLAST of CmoCh18G001380 vs. NCBI nr
Match: gi|470125963|ref|XP_004298965.1| (PREDICTED: uncharacterized protein LOC101308376 [Fragaria vesca subsp. vesca]) HSP 1 Score: 350.9 bits (899), Expect = 2.8e-93 Identity = 180/332 (54.22%), Postives = 231/332 (69.58%), Query Frame = 1
BLAST of CmoCh18G001380 vs. NCBI nr
Match: gi|595847450|ref|XP_007209326.1| (hypothetical protein PRUPE_ppa008249mg [Prunus persica]) HSP 1 Score: 350.1 bits (897), Expect = 4.7e-93 Identity = 179/332 (53.92%), Postives = 233/332 (70.18%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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