CmoCh17G013570 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G013570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Jasmonate-zim-domain protein 10, putative
Location	Cmo_Chr17 : 10562524 .. 10563508 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGGGCTACTGTCGAGCTTGATTTCTTCGGCCTCGAGAAGAAGGCCTCCTCCAGGTCTCAGTTCCACAACCTTCTTCACCGCAAGAGAAGCTTTCGAGGTCCTTCCTCCTCTTCCCCTTCTCCCCAATCTCTAATATTATTTCTTACTGTTCCTTTTCATTTGCCTAATTCTCTTTTTCTCTCTTCCCAGGCATTCACAGCGCCATTTCCAAGATCAACCCCGAGCTTCTCAAATCTGTCATTGGATCTGCCTCCATTGCTCTGCCTCCCACTCCCAAGGACGCCAACCACAACCTTCTCTCGCCTTTGCCTCTCTATAACCCTCTCTTCAGGTAATATTACACAAAATCCTACCTACCTCATCGTCTTCGCGGTTCCGTTTCAAATTTCCTCCGAATTCATCGTTTTCGCTCCCCTTTCTGTTTCTCAGGCCGACTTCTGAATCTCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGTTCGTTCCACCTCTGGATCATCGTCTTACGTACACGACTTTTACATCAGTTTTTTTTTCTTTTTCTGTAACTGATTTTGTTTTTGTTGCTTCCCGATTAATTAATCAATCGCTTTCTTTCTTTGTGGCGTGAAAAAATTCGTTTAGGCCGAGAGCATTCTGAAACTCGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATCCCATCCACCGACCGCCAGCAACAGTTGCTTGCATCTCTTGACGGAGGTGATTAAACATCCACCGACTTGTACTGAACCGATATATATATATATTTTTTTTGATGAAGATATTTATATTTATCAGCATTTCCTTTTACTATTTTCATATTTTGTCTAAAATACATGCTAATTAGTTGCTTTTTTTCAGCAGATCTTCCAATTGCAAGGAAGAAGTCGCTTCAGAGATTCTTGGAGAAGCGTAAGGAGAGGTAA

mRNA sequence

ATGGCTAGGGCTACTGTCGAGCTTGATTTCTTCGGCCTCGAGAAGAAGGCCTCCTCCAGGTCTCAGTTCCACAACCTTCTTCACCGCAAGAGAAGCTTTCGAGGCATTCACAGCGCCATTTCCAAGATCAACCCCGAGCTTCTCAAATCTGTCATTGGATCTGCCTCCATTGCTCTGCCTCCCACTCCCAAGGACGCCAACCACAACCTTCTCTCGCCTTTGCCTCTCTATAACCCTCTCTTCAGGCCGACTTCTGAATCTCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCCGAGAGCATTCTGAAACTCGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATCCCATCCACCGACCGCCAGCAACAGTTGCTTGCATCTCTTGACGGAGCAGATCTTCCAATTGCAAGGAAGAAGTCGCTTCAGAGATTCTTGGAGAAGCGTAAGGAGAGGTAA

Coding sequence (CDS)

ATGGCTAGGGCTACTGTCGAGCTTGATTTCTTCGGCCTCGAGAAGAAGGCCTCCTCCAGGTCTCAGTTCCACAACCTTCTTCACCGCAAGAGAAGCTTTCGAGGCATTCACAGCGCCATTTCCAAGATCAACCCCGAGCTTCTCAAATCTGTCATTGGATCTGCCTCCATTGCTCTGCCTCCCACTCCCAAGGACGCCAACCACAACCTTCTCTCGCCTTTGCCTCTCTATAACCCTCTCTTCAGGCCGACTTCTGAATCTCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCCGAGAGCATTCTGAAACTCGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATCCCATCCACCGACCGCCAGCAACAGTTGCTTGCATCTCTTGACGGAGCAGATCTTCCAATTGCAAGGAAGAAGTCGCTTCAGAGATTCTTGGAGAAGCGTAAGGAGAGGTAA

Homology

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BLAST of CmoCh17G013570 vs. Swiss-Prot
Match: TIF9_ARATH (Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 84/188 (44.68%), Postives = 122/188 (64.89%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRS---QFHNLLHRKRSFRGIHSAISKINPELLKSVIGSA-- 60
           M++AT+ELDF GLEKK ++ +   +F   L R+RSFR I  AISKI+PE++KS++ S   
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLASTGN 60

Query: 61  -------SIALPPTPKDANHNLLSPL-PLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDV 120
                  S ++P TP++    +  P+ P++  L R ++E +  T PMTIFYNG+V+VF V
Sbjct: 61  NSDSSAKSRSVPSTPREDQPQI--PISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQV 120

Query: 121 PRDKAESILKLVAEGKA-------EANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQR 169
            R+KA  I+K+  E  +       E + +V +P+T R +    +L+G DLPIAR+KSLQR
Sbjct: 121 SRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEG-DLPIARRKSLQR 180

[Close]

BLAST of CmoCh17G013570 vs. Swiss-Prot
Match: TIF9_ORYSJ (Protein TIFY 9 OS=Oryza sativa subsp. japonica GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 69/177 (38.98%), Postives = 88/177 (49.72%), Query Frame = 1


Query: 3   RATVELDFFGLEKKASSRSQFH-----NLLHRKRSFRGIH-SAISKINPELLKSVIGSAS 62
           RA VELDF GL   A+     H     +      S RG+  SAI++I P LL+ VI +A 
Sbjct: 4   RAPVELDFLGLRAAAADADDRHAKSGGSSASSSSSIRGMETSAIARIGPHLLRRVIAAAG 63

Query: 63  IALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDVPRDKAESIL 122
              PP P  A      P+P   P       +    +PMT+FYNG+VAVFDV  DKAE+I+
Sbjct: 64  P--PPPPSTA------PVPEEMP------GAAAAAAPMTLFYNGSVAVFDVSHDKAEAIM 123

Query: 123 KLV-----AEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRKER 169
           ++      A+G A  N  V               + A  P+ R KSLQRFL KRKER
Sbjct: 124 RMATEATKAKGLARGNAIVG--------------NFAKEPLTRTKSLQRFLSKRKER 152

[Close]

BLAST of CmoCh17G013570 vs. Swiss-Prot
Match: TIF9_ORYSI (Protein TIFY 9 OS=Oryza sativa subsp. indica GN=TIFY9 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.9e-15
Identity = 69/177 (38.98%), Postives = 88/177 (49.72%), Query Frame = 1


Query: 3   RATVELDFFGLEKKASSRSQFH-----NLLHRKRSFRGIH-SAISKINPELLKSVIGSAS 62
           RA VELDF GL   A+     H     +      S RG+  SAI++I P LL+ VI +A 
Sbjct: 4   RAPVELDFLGLRAAAADADDRHAKSGGSSASSSSSIRGMETSAIARIGPHLLRRVIAAAR 63

Query: 63  IALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDVPRDKAESIL 122
              PP P  A      P+P   P       +    +PMT+FYNG+VAVFDV  DKAE+I+
Sbjct: 64  P--PPPPSTA------PVPEEMP------GAAAAAAPMTLFYNGSVAVFDVSHDKAEAIM 123

Query: 123 KLV-----AEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRKER 169
           ++      A+G A  N  V               + A  P+ R KSLQRFL KRKER
Sbjct: 124 RMATEATKAKGLARGNAIVG--------------NFAKEPLTRTKSLQRFLSKRKER 152

[Close]

BLAST of CmoCh17G013570 vs. Swiss-Prot
Match: TI11E_ORYSI (Protein TIFY 11e OS=Oryza sativa subsp. indica GN=TIFY11E PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-08
Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 94  MTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPTVAIPSTDRQQQLLASLDGADLPI 153
           MTIFY G V V D  P D+A ++L+L A  +        +P  D      A+ + ADLP+
Sbjct: 72  MTIFYGGRVLVLDECPADRAAALLRLAASSRG-------VPRDDLASTAAAAGESADLPV 131

Query: 154 ARKKSLQRFLEKRKER 169
           ARK SLQRF+EKRK R
Sbjct: 132 ARKASLQRFMEKRKGR 140

[Close]

BLAST of CmoCh17G013570 vs. Swiss-Prot
Match: TI11E_ORYSJ (Protein TIFY 11e OS=Oryza sativa subsp. japonica GN=TIFY11E PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-08
Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 94  MTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPTVAIPSTDRQQQLLASLDGADLPI 153
           MTIFY G V V D  P D+A ++L+L A  +        +P  D      A+ + ADLP+
Sbjct: 72  MTIFYGGRVLVLDECPADRAAALLRLAASSRG-------VPRDDLASTAAAAGESADLPV 131

Query: 154 ARKKSLQRFLEKRKER 169
           ARK SLQRF+EKRK R
Sbjct: 132 ARKASLQRFMEKRKGR 140

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BLAST of CmoCh17G013570 vs. TrEMBL
Match: A0A0A0K9H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091930 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-72
Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALP 60
           MARATVELDFFGLEK+ASS+SQFH+LLHRKRSFRGIH+AISKI+P+LLKSVIGSASI+LP
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHNAISKIDPQLLKSVIGSASISLP 60

Query: 61  PTPK-DANHNLLSPLPLYNPLFRPT-SESLQHTSPMTIFYNGTVAVFDVPRDKAESILKL 120
           PTP+  ANHN+LSPLPLY PL+RPT SESLQHTS MTIFYNGTVAVFDVPRDKAE+ILKL
Sbjct: 61  PTPEAAANHNVLSPLPLYTPLYRPTASESLQHTSQMTIFYNGTVAVFDVPRDKAENILKL 120

Query: 121 VAEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRKER 169
           VAEGKAE NPTVAIPSTD QQ LLASLDG DLPIARKKSLQRFLEKRKER
Sbjct: 121 VAEGKAEGNPTVAIPSTDHQQHLLASLDG-DLPIARKKSLQRFLEKRKER 169

[Close]

BLAST of CmoCh17G013570 vs. TrEMBL
Match: A0A061E5T9_THECC (Jasmonate-zim-domain protein 10, putative OS=Theobroma cacao GN=TCM_008419 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-41
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSA----- 60
           M+RATVELDFFG+EK++S +SQF   L R+RSFRG+  AISK+NPEL+KSVI S      
Sbjct: 1   MSRATVELDFFGMEKESSCKSQFQRFLDRRRSFRGLQGAISKMNPELIKSVIASGLTNQG 60

Query: 61  -----------SIALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAV 120
                      S ++P +PK+A  +LL  LP+ +P+ R TSE    T+P+TIFY GTV++
Sbjct: 61  QENVNPIDSNKSFSVPSSPKEA-QSLLPTLPVLSPVARATSEKGPETAPLTIFYKGTVSI 120

Query: 121 FDVPRDKAESILKLVAEGKAE----ANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQR 169
           F+VPRDKAESILKL  EG ++        VA PS+D Q+QLL +L+G DLPIARKKSLQR
Sbjct: 121 FNVPRDKAESILKLAVEGSSKNAELTKSEVATPSSD-QRQLLETLNG-DLPIARKKSLQR 180

[Close]

BLAST of CmoCh17G013570 vs. TrEMBL
Match: A0A0D2PZL5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G021800 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 105/185 (56.76%), Postives = 126/185 (68.11%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSA----- 60
           M+RATVELDFFG+EK  S +SQF   L R+RSFRGI  AISK+NPEL+KSVI S      
Sbjct: 1   MSRATVELDFFGMEKANSCKSQFQKFLDRRRSFRGIQGAISKMNPELIKSVIASGSTNRN 60

Query: 61  ------SIALPPTPKDANHNLLSPLPLYNPLFRPT-SESLQHTSPMTIFYNGTVAVFDVP 120
                 S ++P +PK+     L  LPL NP  R T SE    T+P+TIFYNGTV+V +VP
Sbjct: 61  PVDWRKSFSVPSSPKEDRSTSLPSLPLLNPALRSTPSEDSPETAPLTIFYNGTVSVINVP 120

Query: 121 RDKAESILKLVAEGKAEANPTV-----AIPSTDRQQQLLASLDGADLPIARKKSLQRFLE 169
           RDKAESI KL  EG ++   +V     A PS+D QQ LL + +G DLPIAR+KSLQRFLE
Sbjct: 121 RDKAESIFKLAVEGSSKNIESVDSSKAANPSSD-QQNLLEARNG-DLPIARRKSLQRFLE 180

[Close]

BLAST of CmoCh17G013570 vs. TrEMBL
Match: A0A067JH87_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23114 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-39
Identity = 102/182 (56.04%), Postives = 125/182 (68.68%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASI--- 60
           M+RATVELDFFG+E+ ASS+S+F   L R++SFR I SAISKINPELLKSVI S S    
Sbjct: 1   MSRATVELDFFGMERAASSKSRFPKFLRRQKSFRDIQSAISKINPELLKSVIASGSANQL 60

Query: 61  -----------ALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFD 120
                       +P TPK+ +     PLP+Y+PL RP  E+    +P+TIFYNGTVAVFD
Sbjct: 61  HSPASGKTFSPPVPSTPKE-DAIRFPPLPVYSPLQRPVLENPPQVAPLTIFYNGTVAVFD 120

Query: 121 VPRDKAESILKLVAEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRK 169
           VPRDKAE+ILKL   G + +   +       QQQ+L +L+G DLPIAR+KSLQRFLEKR 
Sbjct: 121 VPRDKAETILKLAEHGISTSVELI------NQQQILDNLEG-DLPIARRKSLQRFLEKRN 174

[Close]

BLAST of CmoCh17G013570 vs. TrEMBL
Match: A0A0B4RUX7_HEVBR (JAZ10 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.9e-39
Identity = 104/184 (56.52%), Postives = 123/184 (66.85%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALP 60
           M+RATVELDFFG+EK+  + S F   L+R+RSFR I SAISKINPELLKSVI S S    
Sbjct: 1   MSRATVELDFFGMEKQICANSHFPKFLNRQRSFRDIQSAISKINPELLKSVIASGSANQQ 60

Query: 61  PTPKDANH----------------NLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAV 120
            TPK+  H                     LP+Y PL RP  E+   T+P+TIFYNGTVAV
Sbjct: 61  STPKNGYHFDSKKSFSVPAAPKEQTPFPRLPVYYPLQRPALENPPQTAPLTIFYNGTVAV 120

Query: 121 FDVPRDKAESILKLVAEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEK 169
           FDVPRDKAE+ILKL   G ++      + ST+ Q+QLL +LDG DLPIAR+KSLQ FLEK
Sbjct: 121 FDVPRDKAETILKLAQNGISK-----FVESTN-QKQLLGTLDG-DLPIARRKSLQMFLEK 177

[Close]

BLAST of CmoCh17G013570 vs. TAIR10
Match: AT5G13220.1 (AT5G13220.1 jasmonate-zim-domain protein 10)

HSP 1 Score: 131.0 bits (328), Expect = 7.1e-31
Identity = 84/188 (44.68%), Postives = 122/188 (64.89%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRS---QFHNLLHRKRSFRGIHSAISKINPELLKSVIGSA-- 60
           M++AT+ELDF GLEKK ++ +   +F   L R+RSFR I  AISKI+PE++KS++ S   
Sbjct: 1   MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLASTGN 60

Query: 61  -------SIALPPTPKDANHNLLSPL-PLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDV 120
                  S ++P TP++    +  P+ P++  L R ++E +  T PMTIFYNG+V+VF V
Sbjct: 61  NSDSSAKSRSVPSTPREDQPQI--PISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQV 120

Query: 121 PRDKAESILKLVAEGKA-------EANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQR 169
            R+KA  I+K+  E  +       E + +V +P+T R +    +L+G DLPIAR+KSLQR
Sbjct: 121 SRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEG-DLPIARRKSLQR 180

[Close]

BLAST of CmoCh17G013570 vs. TAIR10
Match: AT3G43440.1 (AT3G43440.1 jasmonate-zim-domain protein 11)

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-08
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 91  TSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPTVAIPSTDRQQQLLASLDGAD 150
           ++ +TI + G+  VF+ VP  K + I+++   GK   N T   P+ +R    L+    AD
Sbjct: 43  STQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGKQTKNVTGINPALNRA---LSFSTVAD 102

Query: 151 LPIARKKSLQRFLEKRKER 169
           LPIAR++SLQRFLEKR++R
Sbjct: 103 LPIARRRSLQRFLEKRRDR 118

[Close]

BLAST of CmoCh17G013570 vs. TAIR10
Match: AT5G20900.1 (AT5G20900.1 jasmonate-zim-domain protein 12)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 38/109 (34.86%), Postives = 56/109 (51.38%), Query Frame = 1


Query: 84  TSESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPT----VAIPSTDRQ 143
           T+E     + +TIF+ G+V VFD +P +K + IL++ A+     N T    V+ P+ +R 
Sbjct: 48  TAEPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISPVSSPALNRA 107

Query: 144 -------------------QQLLASLDGADLPIARKKSLQRFLEKRKER 169
                              Q +      ADLPIAR+ SLQRFLEKR++R
Sbjct: 108 PSFSSTSNVASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDR 156

[Close]

BLAST of CmoCh17G013570 vs. TAIR10
Match: AT1G19180.1 (AT1G19180.1 jasmonate-zim-domain protein 1)

HSP 1 Score: 48.5 bits (114), Expect = 4.6e-06
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 1


Query: 91  TSPMTIFYNGTVAVF-DVPRDKAESILKLVAEGKAE----------------ANPTVAIP 150
           T+P+TIFY G V VF D   +KA+ ++ L ++G A                 AN      
Sbjct: 124 TAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPR 183

Query: 151 STDRQQQLLASLDG-ADLPIARKKSLQRFLEKRKER 169
            T  Q+ + +S     +LPIAR+ SL RFLEKRK+R
Sbjct: 184 KTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDR 219

[Close]

BLAST of CmoCh17G013570 vs. TAIR10
Match: AT1G74950.1 (AT1G74950.1 TIFY domain/Divergent CCT motif family protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.0e-06
Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = 1


Query: 82  RPTSESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEA-------------- 141
           +P S+S    +P+TIFY G V VFD    +KA+ ++ L  +G A++              
Sbjct: 112 KPESQS----APLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSA 171

Query: 142 ----------NPTVAIPSTDRQQQLL---ASLDGADLPIARKKSLQRFLEKRKER 169
                     NP  +   T  Q+ +    ASL   +LPIAR+ SL RFLEKRK+R
Sbjct: 172 YSQKEIASSPNPVCSPAKTAAQEPIQPNPASL-ACELPIARRASLHRFLEKRKDR 221

[Close]

BLAST of CmoCh17G013570 vs. NCBI nr
Match: gi|778711756|ref|XP_011656792.1| (PREDICTED: protein TIFY 9-like [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 3.5e-72
Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALP 60
           MARATVELDFFGLEK+ASS+SQFH+LLHRKRSFRGIH+AISKI+P+LLKSVIGSASI+LP
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHNAISKIDPQLLKSVIGSASISLP 60

Query: 61  PTPK-DANHNLLSPLPLYNPLFRPT-SESLQHTSPMTIFYNGTVAVFDVPRDKAESILKL 120
           PTP+  ANHN+LSPLPLY PL+RPT SESLQHTS MTIFYNGTVAVFDVPRDKAE+ILKL
Sbjct: 61  PTPEAAANHNVLSPLPLYTPLYRPTASESLQHTSQMTIFYNGTVAVFDVPRDKAENILKL 120

Query: 121 VAEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRKER 169
           VAEGKAE NPTVAIPSTD QQ LLASLDG DLPIARKKSLQRFLEKRKER
Sbjct: 121 VAEGKAEGNPTVAIPSTDHQQHLLASLDG-DLPIARKKSLQRFLEKRKER 169

[Close]

BLAST of CmoCh17G013570 vs. NCBI nr
Match: gi|659119900|ref|XP_008459903.1| (PREDICTED: protein TIFY 9-like [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 5.0e-71
Identity = 151/171 (88.30%), Postives = 161/171 (94.15%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSAS-IAL 60
           MARATVELDFFGLEK+ASS+SQFH+LLHRKRSFRGIHSAISKI+P+LLKSVIGSAS I+ 
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHSAISKIDPQLLKSVIGSASSISQ 60

Query: 61  PPTPKDA-NHNLLSPLPLYNPLFRPT-SESLQHTSPMTIFYNGTVAVFDVPRDKAESILK 120
           PPTPK A NHN+LSPLPLY P+F+PT SE LQHTS MTIFYNGTVAVFDVPRDKAE+ILK
Sbjct: 61  PPTPKAAANHNVLSPLPLYTPIFKPTGSELLQHTSQMTIFYNGTVAVFDVPRDKAENILK 120

Query: 121 LVAEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRKER 169
           LVAEGKAEANPTVAIPSTD QQQLLASLDG DLPIARKKSLQRFLEKRKER
Sbjct: 121 LVAEGKAEANPTVAIPSTDHQQQLLASLDG-DLPIARKKSLQRFLEKRKER 170

[Close]

BLAST of CmoCh17G013570 vs. NCBI nr
Match: gi|590691644|ref|XP_007043840.1| (Jasmonate-zim-domain protein 10, putative [Theobroma cacao])

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-41
Identity = 104/188 (55.32%), Postives = 134/188 (71.28%), Query Frame = 1


Query: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSA----- 60
           M+RATVELDFFG+EK++S +SQF   L R+RSFRG+  AISK+NPEL+KSVI S      
Sbjct: 1   MSRATVELDFFGMEKESSCKSQFQRFLDRRRSFRGLQGAISKMNPELIKSVIASGLTNQG 60

Query: 61  -----------SIALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAV 120
                      S ++P +PK+A  +LL  LP+ +P+ R TSE    T+P+TIFY GTV++
Sbjct: 61  QENVNPIDSNKSFSVPSSPKEA-QSLLPTLPVLSPVARATSEKGPETAPLTIFYKGTVSI 120

Query: 121 FDVPRDKAESILKLVAEGKAE----ANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQR 169
           F+VPRDKAESILKL  EG ++        VA PS+D Q+QLL +L+G DLPIARKKSLQR
Sbjct: 121 FNVPRDKAESILKLAVEGSSKNAELTKSEVATPSSD-QRQLLETLNG-DLPIARKKSLQR 180

[Close]

BLAST of CmoCh17G013570 vs. NCBI nr
Match: gi|1009167761|ref|XP_015902294.1| (PREDICTED: protein TIFY 9 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40
Identity = 107/199 (53.77%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 1   MARATVELDFFGLEK--KASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASI- 60
           M++ATVELDFFG+E+   +SS+SQF   LH +RSFRGI SAISKI+PE+LKSVI S S+ 
Sbjct: 1   MSKATVELDFFGMERDQNSSSKSQFQKFLHSQRSFRGIQSAISKIDPEILKSVIASGSVM 60

Query: 61  ----------------------ALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMT 120
                                 ++P +PK  +  L  PLP+Y P  RP SE+LQ T+P+T
Sbjct: 61  NNQMGSGDNAVNRSVITSQKSYSVPSSPK-TDQILFPPLPVYVPSNRPISENLQETAPLT 120

Query: 121 IFYNGTVAVFDVPRDKAESILKLVAE------GKAEANPTVAIPSTDRQQQLLASLDGAD 169
           IFYNGTV+VFDVPRDKAE ILK+  E        A AN    +PS ++QQ L   L+G D
Sbjct: 121 IFYNGTVSVFDVPRDKAEGILKIAFERGCKAVESATANAKSPLPSCEQQQLLDPDLNG-D 180

[Close]

BLAST of CmoCh17G013570 vs. NCBI nr
Match: gi|1009167763|ref|XP_015902295.1| (PREDICTED: protein TIFY 9 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40
Identity = 107/199 (53.77%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 1   MARATVELDFFGLEK--KASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASI- 60
           M++ATVELDFFG+E+   +SS+SQF   LH +RSFRGI SAISKI+PE+LKSVI S S+ 
Sbjct: 1   MSKATVELDFFGMERDQNSSSKSQFQKFLHSQRSFRGIQSAISKIDPEILKSVIASGSVM 60

Query: 61  ----------------------ALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMT 120
                                 ++P +PK  +  L  PLP+Y P  RP SE+LQ T+P+T
Sbjct: 61  NNQMGSGDNAVNRSVITSQKSYSVPSSPK-TDQILFPPLPVYVPSNRPISENLQETAPLT 120

Query: 121 IFYNGTVAVFDVPRDKAESILKLVAE------GKAEANPTVAIPSTDRQQQLLASLDGAD 169
           IFYNGTV+VFDVPRDKAE ILK+  E        A AN    +PS ++QQ L   L+G D
Sbjct: 121 IFYNGTVSVFDVPRDKAEGILKIAFERGCKAVESATANAKSPLPSCEQQQLLDPDLNG-D 180

The following BLAST results are available for this feature:

BLAST of CmoCh17G013570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIF9_ARATH	1.3e-29	44.68	Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1	[more]
TIF9_ORYSJ	3.0e-15	38.98	Protein TIFY 9 OS=Oryza sativa subsp. japonica GN=TIFY9 PE=1 SV=1	[more]
TIF9_ORYSI	3.9e-15	38.98	Protein TIFY 9 OS=Oryza sativa subsp. indica GN=TIFY9 PE=3 SV=1	[more]
TI11E_ORYSI	6.1e-08	46.05	Protein TIFY 11e OS=Oryza sativa subsp. indica GN=TIFY11E PE=3 SV=1	[more]
TI11E_ORYSJ	6.1e-08	46.05	Protein TIFY 11e OS=Oryza sativa subsp. japonica GN=TIFY11E PE=2 SV=1	[more]

BLAST of CmoCh17G013570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9H7_CUCSA	2.4e-72	88.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091930 PE=4 SV=1	[more]
A0A061E5T9_THECC	2.2e-41	55.32	Jasmonate-zim-domain protein 10, putative OS=Theobroma cacao GN=TCM_008419 PE=4 ...	[more]
A0A0D2PZL5_GOSRA	1.2e-39	56.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G021800 PE=4 SV=1	[more]
A0A067JH87_JATCU	3.5e-39	56.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23114 PE=4 SV=1	[more]
A0A0B4RUX7_HEVBR	7.9e-39	56.52	JAZ10 OS=Hevea brasiliensis PE=2 SV=1	[more]

BLAST of CmoCh17G013570 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13220.1	7.1e-31	44.68	jasmonate-zim-domain protein 10	[more]
AT3G43440.1	4.9e-08	41.77	jasmonate-zim-domain protein 11	[more]
AT5G20900.1	1.9e-07	34.86	jasmonate-zim-domain protein 12	[more]
AT1G19180.1	4.6e-06	37.50	jasmonate-zim-domain protein 1	[more]
AT1G74950.1	6.0e-06	34.78	TIFY domain/Divergent CCT motif family protein	[more]

BLAST of CmoCh17G013570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711756\|ref\|XP_011656792.1\|	3.5e-72	88.24	PREDICTED: protein TIFY 9-like [Cucumis sativus]	[more]
gi\|659119900\|ref\|XP_008459903.1\|	5.0e-71	88.30	PREDICTED: protein TIFY 9-like [Cucumis melo]	[more]
gi\|590691644\|ref\|XP_007043840.1\|	3.2e-41	55.32	Jasmonate-zim-domain protein 10, putative [Theobroma cacao]	[more]
gi\|1009167761\|ref\|XP_015902294.1\|	2.1e-40	53.77	PREDICTED: protein TIFY 9 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009167763\|ref\|XP_015902295.1\|	2.1e-40	53.77	PREDICTED: protein TIFY 9 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010399	Tify_dom
IPR018467	CCT_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0048583	regulation of response to stimulus
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013570.1	CmoCh17G013570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 91..119 score: 1.6
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 87..121 score: 2.
IPR010399	Tify domain	PROFILE	PS51320	TIFY	coord: 87..121 score: 12
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	CCT_2	coord: 151..168 score: 1.
None	No IPR available	PANTHER	PTHR33077	FAMILY NOT NAMED	coord: 19..168 score: 3.1
None	No IPR available	PANTHER	PTHR33077:SF6	PROTEIN TIFY 9	coord: 19..168 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G013570	Cucsa.349280	Cucumber (Gy14) v1	cgycmoB0951
CmoCh17G013570	CmaCh17G014100	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G013570	Cla001487	Watermelon (97103) v1	cmowmB347
CmoCh17G013570	Csa6G091930	Cucumber (Chinese Long) v2	cmocuB358
CmoCh17G013570	MELO3C022348	Melon (DHL92) v3.5.1	cmomeB308
CmoCh17G013570	ClCG06G001800	Watermelon (Charleston Gray)	cmowcgB318
CmoCh17G013570	CSPI06G07440	Wild cucumber (PI 183967)	cmocpiB361
CmoCh17G013570	Lsi09G017620	Bottle gourd (USVL1VR-Ls)	cmolsiB322
CmoCh17G013570	Cp4.1LG12g09990	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G013570	MELO3C022348.2	Melon (DHL92) v3.6.1	cmomedB353
CmoCh17G013570	CsaV3_6G007840	Cucumber (Chinese Long) v3	cmocucB0433
CmoCh17G013570	Cla97C06G111100	Watermelon (97103) v2	cmowmbB354
CmoCh17G013570	Bhi12G002135	Wax gourd	cmowgoB0456
CmoCh17G013570	Bhi01G002893	Wax gourd	cmowgoB0479
CmoCh17G013570	CsGy6G007460	Cucumber (Gy14) v2	cgybcmoB734
CmoCh17G013570	Carg11568	Silver-seed gourd	carcmoB0021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G013570	Cucurbita moschata (Rifu)	cmocmoB322
CmoCh17G013570	Cucurbita maxima (Rimu)	cmacmoB899
CmoCh17G013570	Cucurbita pepo (Zucchini)	cmocpeB352
CmoCh17G013570	Cucurbita pepo (Zucchini)	cmocpeB372
CmoCh17G013570	Silver-seed gourd	carcmoB1312