CmoCh17G012400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G012400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Invertase/pectin methylesterase inhibitor family protein
Location	Cmo_Chr17 : 9840810 .. 9842477 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTCTATTGTTCTTGCAGTCTCTTCTCTTTTTGTCCTTTCAATTCTCTTCTCGAATGGCAATGCAACTTCCCCGAACGACGTCGTTTCCACGATCTGCCCAAAAACTAGAAACCCTTCTTTTTGCTCAAACGTGTTGAAATCGGCTGGCACGTCAGACCTCAAAGGGTTGGCCACCTTCACCCTCAACCTCGCCCATGACAAGGCTACTGAAAGTCGTGCCCTTGCCCAATCCCTGGCGTCCAAGGCCGCCGATCCCAAGCTTAAGGAGCACTATGACACCTGTGCCGGACGCTTCGATGACGCCGTCGACGACATCGAGGGTGTGAAGAGTAACTTGGAGAATGGTGACTACAATGGCGTCAACACTTATGCTTCTGCAGCCATGACGGAGGCCGATGACTGTCTGGACAGCCTTACGAAGCCGCCAAAGGACTCGTCGGCGTTGTCTGACGACGGGAAGACGGTGGAAGATATTTGTAGCATTATCTTGGTGGTATCCAATCTTCTTATTGGGGGTGCCTAATTCCTTTATGGTGTAACTTTCTTGATTGCCATGAACTAATAAAAAGTCTACTGAATTTTATATTAGCCCATCTTTTAATTTATTTTTGGTTTCACTTTGATCCTAAACTATGGGGAGGTTGTTCGTGGGCTCGATAGGCCTTGGGGGAGGCTCTATAGTGTAGTTTGTTCGAGGGGAAGATCGTTGGAGAGAGAATCTCATATTTATTAATACAGTACTAAATTACAAGGATATGGAAAGAACAATAAATGTAAAGATAGTATAGTAAGTAGATATTTGACTTTTTATATATGGTAGACTATAATTCAGTACTAAATATCCTTAATATTGTCAAAAGATGATGGAATGAAATGTTTCCTCGAATTGAAGACACGAACAAACGAGCGACACAAGTTGAGAGAAGTTTGTGATTGGCGTTGGAGAGAAAAAAGCTTAACCTATGCTTTGGGGTGTGTTCATATGATGCTATGCTAAATAAAGCGTAACCTAATGAACGGGAGACGCACGCTATTAAAAGGTGTAGTTTTTGTAGGGTATAAATATATATATGTGTGTGTGATCCCTTAATGGAGCAAAAAACAGACAAAAATGACGTCTTCTAGTTTTATTGTAGTCTCTTCTCTTTTAGCTTTCGTCCTTTCACTTCTCTTCTCCAACGGCGTCGTTCCCATGCATGCAGCTTTCACAAACGGTGCCCCTTTCACCATCTGCAAGAAAACTAGAAACCCTTCTTTATGCTTTAACGTCTTGAAATCTGCCGGCACCACAAACCTCAAACACCTCGCCACCTTCACCCTCAACCTCGCCAACAACAAGGCTGCTCAAAGCTGTGCCCTCGCCCAGTCCCTGGCGTCCAAGGCTGTCGATCCCAGGCTTAAGGAGCTCTACGCCACCTGTGTCGAACACTACAACAACGTTGTCGTCGTCATCGAGGGTGCGAAGAGCAACTTGGGGAAAGGTGACTACAATGGCGTCAACATTCAAGCCTCTAGAGCCATGACCGAGGCCAGCGACTGTCTGGACAACTTCACGCAGCCGCCAAAGGACCCATCAACGCTGTCGGGCAATGGAAAGGCTGTGGAAGATATTTGTAGCATTGTCTTGGTTATAGCCAATCTTCTTCTTGGGCGTGCCTAA

mRNA sequence

ATGGCGAATTCTATTGTTCTTGCAGTCTCTTCTCTTTTTGTCCTTTCAATTCTCTTCTCGAATGGCAATGCAACTTCCCCGAACGACGTCGTTTCCACGATCTGCCCAAAAACTAGAAACCCTTCTTTTTGCTCAAACGTGTTGAAATCGGCTGGCACGTCAGACCTCAAAGGGTTGGCCACCTTCACCCTCAACCTCGCCCATGACAAGGCTACTGAAAGTCGTGCCCTTGCCCAATCCCTGGCGTCCAAGGCCGCCGATCCCAAGCTTAAGGAGCACTATGACACCTGTGCCGGACGCTTCGATGACGCCGTCGACGACATCGAGGGTGTGAAGAGTAACTTGGAGAATGGTGACTACAATGGCGTCAACACTTATGCTTCTGCAGCCATGACGGAGGCCGATGACTGTCTGGACAGCCTTACGAAGCCGCCAAAGGACTCGTCGGCGTTGTCTGACGACGGGAAGACGGTGGAAGATATTTGTAGCATTATCTTGGTGGTATCCAATCTTCTTATTGGGGTCTCTTCTCTTTTAGCTTTCGTCCTTTCACTTCTCTTCTCCAACGGCGTCGTTCCCATGCATGCAGCTTTCACAAACGGTGCCCCTTTCACCATCTGCAAGAAAACTAGAAACCCTTCTTTATGCTTTAACGTCTTGAAATCTGCCGGCACCACAAACCTCAAACACCTCGCCACCTTCACCCTCAACCTCGCCAACAACAAGGCTGCTCAAAGCTGTGCCCTCGCCCAGTCCCTGGCGTCCAAGGCTGTCGATCCCAGGCTTAAGGAGCTCTACGCCACCTGTGTCGAACACTACAACAACGTTGTCGTCGTCATCGAGGGTGCGAAGAGCAACTTGGGGAAAGGTGACTACAATGGCGTCAACATTCAAGCCTCTAGAGCCATGACCGAGGCCAGCGACTGTCTGGACAACTTCACGCAGCCGCCAAAGGACCCATCAACGCTGTCGGGCAATGGAAAGGCTGTGGAAGATATTTGTAGCATTGTCTTGGTTATAGCCAATCTTCTTCTTGGGCGTGCCTAA

Coding sequence (CDS)

ATGGCGAATTCTATTGTTCTTGCAGTCTCTTCTCTTTTTGTCCTTTCAATTCTCTTCTCGAATGGCAATGCAACTTCCCCGAACGACGTCGTTTCCACGATCTGCCCAAAAACTAGAAACCCTTCTTTTTGCTCAAACGTGTTGAAATCGGCTGGCACGTCAGACCTCAAAGGGTTGGCCACCTTCACCCTCAACCTCGCCCATGACAAGGCTACTGAAAGTCGTGCCCTTGCCCAATCCCTGGCGTCCAAGGCCGCCGATCCCAAGCTTAAGGAGCACTATGACACCTGTGCCGGACGCTTCGATGACGCCGTCGACGACATCGAGGGTGTGAAGAGTAACTTGGAGAATGGTGACTACAATGGCGTCAACACTTATGCTTCTGCAGCCATGACGGAGGCCGATGACTGTCTGGACAGCCTTACGAAGCCGCCAAAGGACTCGTCGGCGTTGTCTGACGACGGGAAGACGGTGGAAGATATTTGTAGCATTATCTTGGTGGTATCCAATCTTCTTATTGGGGTCTCTTCTCTTTTAGCTTTCGTCCTTTCACTTCTCTTCTCCAACGGCGTCGTTCCCATGCATGCAGCTTTCACAAACGGTGCCCCTTTCACCATCTGCAAGAAAACTAGAAACCCTTCTTTATGCTTTAACGTCTTGAAATCTGCCGGCACCACAAACCTCAAACACCTCGCCACCTTCACCCTCAACCTCGCCAACAACAAGGCTGCTCAAAGCTGTGCCCTCGCCCAGTCCCTGGCGTCCAAGGCTGTCGATCCCAGGCTTAAGGAGCTCTACGCCACCTGTGTCGAACACTACAACAACGTTGTCGTCGTCATCGAGGGTGCGAAGAGCAACTTGGGGAAAGGTGACTACAATGGCGTCAACATTCAAGCCTCTAGAGCCATGACCGAGGCCAGCGACTGTCTGGACAACTTCACGCAGCCGCCAAAGGACCCATCAACGCTGTCGGGCAATGGAAAGGCTGTGGAAGATATTTGTAGCATTGTCTTGGTTATAGCCAATCTTCTTCTTGGGCGTGCCTAA

Homology

[Close]

BLAST of CmoCh17G012400 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 4.2e-27
Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 1


Query: 10  SSLFV---LSILFSNGNATSP-----NDVVSTICPKTRNPSFCSNVLKS---AGTSDLKG 69
           SSLFV   L ILF +  +  P     N ++S ICPKTRNPS C   L+S   + + DLKG
Sbjct: 8   SSLFVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKG 67

Query: 70  LATFTLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENG 129
           L  F++++A   A ++  +  SL ++A DPKLK  Y+TC+  + DA+D +   K  L +G
Sbjct: 68  LGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTSG 127

Query: 130 DYNGVNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLLIG 175
           DYN +N YASAA   A  C DS   PP   + L      +ED+C I+LV+SNLL G
Sbjct: 128 DYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLPG 183

[Close]

BLAST of CmoCh17G012400 vs. Swiss-Prot
Match: PMEI1_ARATH (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana GN=PMEI1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.7e-18
Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 1


Query: 180 AFVLSLLFSNGVVPMHAAFTNGAPFTICKKTRNPSLCFNVLKSA-GTTNLKHLATFTLNL 239
           AF+ SL+F   ++    A T+    TIC KT NPS C   L +   + NL+ LA  TL+ 
Sbjct: 9   AFLSSLMFLL-LIGSSYAITSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDS 68

Query: 240 ANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVVVVIEGAKSNLGKGDYNGVNIQ 299
              +A Q+    QS+    VDPR K  Y +CV+ Y + +  +E A  +L  GD  G+N++
Sbjct: 69  TQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMK 128

Query: 300 ASRAMTEASDCLDNFTQPPKDPSTLSGNGKAVEDICSIVLVIANLL 345
            S A+  A  CLD+  +     S++  N K ++++C I LVI+N+L
Sbjct: 129 VSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNML 173

[Close]

BLAST of CmoCh17G012400 vs. Swiss-Prot
Match: PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-16
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 1


Query: 175 VSSLLAFVLSLLFSNGVVPMHAAFTNGAPFTICKKTRNPSLCFNVLKSAGTTN---LKHL 234
           +SSL+ FV++   +  V  + A         IC K +N S C + +KS   T+   L+ L
Sbjct: 11  MSSLMFFVMTGSLNAQVADIKA---------ICGKAKNQSFCTSYMKSNPKTSGADLQTL 70

Query: 235 ATFTLNLANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVVVVIEGAKSNLGKGD 294
           A  T   A   A++     QSL   A +P +K+ Y +CV+HY + +  +  AK +L  GD
Sbjct: 71  ANITFGSAQTSASEGFRKIQSLVKTATNPTMKKAYTSCVQHYKSAISSLNDAKQSLASGD 130

Query: 295 YNGVNIQASRAMTEASDCLDNFTQPPKDPSTLSGNGKAVEDICSIVLVIANLL 345
             G+NI+ S AM   S C  +      DPS +  +G   ++IC IVLVI+N++
Sbjct: 131 GKGLNIKVSAAMEGPSTCEQDMADFKVDPSAVKNSGD-FQNICGIVLVISNMM 173

[Close]

BLAST of CmoCh17G012400 vs. Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-07
Identity = 71/329 (21.58%), Postives = 132/329 (40.12%), Query Frame = 1


Query: 26  SPNDVVSTICPKTRNPSFCSNV---LKSAGTSDLKGLATFTLNLAHDKATESRALAQSLA 85
           +P   +  +C  TR P+ C +    L S+ T+D + L   +L +  ++      L + LA
Sbjct: 266 TPAASLRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLA 325

Query: 86  SKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLEN-GD---------YNGVNTYASAAMT 145
            +  D +LK     C   F+DA+D +    S +E  GD          + + T+ SAA+T
Sbjct: 326 EETDDERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVT 385

Query: 146 EADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLLIGVSSLLAFVLSLLFSNGVV 205
           + D CLD+L +  ++ +  ++          I L + + ++      +  L+++    + 
Sbjct: 386 DHDTCLDALDELSQNKTEYANS--------PISLKLKSAMVNSRKFTSNSLAIIAKFPIH 445

Query: 206 PMHAAFT-----------NGAPFTICKKTRNPSLCFNVLK----SAGTTNLKHLATFTLN 265
             H   +           +    T+C  T  P+ C + +     S  TT+ K L   +L 
Sbjct: 446 ERHGVQSPRLRKSPHPTPSSVLRTVCNVTNYPASCISSISKLPLSKTTTDPKVLFRLSLQ 505

Query: 266 LANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVV-----------VVIEGAKSN 316
           +  ++      L + LA +  D  LK   + C + ++  V            VI G K N
Sbjct: 506 VTFDELNSIVGLPKKLAEETNDEGLKSALSVCADVFDLAVDSVNDTISSLDEVISGGKKN 565

[Close]

BLAST of CmoCh17G012400 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-39
Identity = 93/169 (55.03%), Postives = 118/169 (69.82%), Query Frame = 1


Query: 3   NSIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLATF 62
           NS  + VS + VL  +  +  A+S NDV+STICPKT NP FCS+VLKSAGT+DLKGL  +
Sbjct: 4   NSCFITVSLIGVLLFIIISYVASS-NDVISTICPKTSNPPFCSSVLKSAGTTDLKGLVVY 63

Query: 63  TLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDYNG 122
           TLNLAH  A +S  LA SLA  A +P+LK+ Y +C   +D+AV DIE  + +L   D+NG
Sbjct: 64  TLNLAHTNAGKSLTLANSLAKTATNPQLKQRYSSCVESYDEAVGDIENAQKDLAVEDFNG 123

Query: 123 VNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNL 172
           VN   S AMT   DC D   +PPKD+S L ++GKT+ DICSIILV+SNL
Sbjct: 124 VNIVTSGAMTNIGDCQDKFAQPPKDTSLLLENGKTINDICSIILVISNL 171

[Close]

BLAST of CmoCh17G012400 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 91/169 (53.85%), Postives = 115/169 (68.05%), Query Frame = 1


Query: 4   SIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLATFT 63
           +IV   S LF  S++ S    T  NDV S+ICPKTRNP FC +VLKSAG++DLK LAT+T
Sbjct: 15  AIVFVFSFLF-FSVVPSRATTTPSNDVASSICPKTRNPPFCVDVLKSAGSTDLKVLATYT 74

Query: 64  LNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDYNGV 123
           LNLA++ A +S  LA+SLA+   +P LK  Y +C   +++A  DIE  KSNL +GD+NGV
Sbjct: 75  LNLANENALKSTNLAKSLAAMTTNPPLKNQYLSCYESYEEATSDIENAKSNLASGDFNGV 134

Query: 124 NTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
           N   S  MT   DCLDS  +   D S L  DGKT+ D+CSIILV+SNLL
Sbjct: 135 NIATSGVMTSVSDCLDSFKQLRIDPSLLK-DGKTLNDVCSIILVISNLL 181

[Close]

BLAST of CmoCh17G012400 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.1e-24
Identity = 74/183 (40.44%), Postives = 110/183 (60.11%), Query Frame = 1


Query: 166 LVVSNLLIGVSSLLAFVLSLLFSNGVVPMHA----AFTNGAPFTICKKTRNPSLCFNVLK 225
           ++ SNL  GV     F+   L SN V+P++A    +  +     IC +T NPS C ++L+
Sbjct: 1   MISSNLNFGV-----FLFGFLLSNNVIPLNADTILSNIDTLASNICPQTSNPSFCASILE 60

Query: 226 SAGTTNLKHLATFTLNLANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVVVVIE 285
           +A   +LK L  ++L LA+  A +S  LA++LA    +  LK+ Y  C E+Y+  +  IE
Sbjct: 61  NANNIDLKALIAYSLKLAHTNAGKSMTLAKALAVLTTNTLLKKQYLFCFENYDEAMCDIE 120

Query: 286 GAKSNLGKGDYNGVNIQASRAMTEASDCLDNFTQPPKDPSTLSGNGKAVEDICSIVLVIA 345
            AK++L  GDY+GVN+  S AM  A DC D+F QP KD S L  N K ++DI SI+LVI+
Sbjct: 121 KAKNDLVFGDYSGVNLAISDAMMIADDCHDSFKQPLKDMSLLPNNTKMLKDIYSIILVIS 178

[Close]

BLAST of CmoCh17G012400 vs. TrEMBL
Match: A0A0A0KHY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.7e-23
Identity = 69/174 (39.66%), Postives = 98/174 (56.32%), Query Frame = 1


Query: 1   MANSIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSD--LKG 60
           + +SI++ +  LF  S++  + +  SPN + +TICPKTRN +FC  VLK  G SD  L  
Sbjct: 16  VVSSILIFLFGLFFFSVVLLHADTGSPNVLTTTICPKTRNSTFCKTVLKPVGKSDAALLK 75

Query: 61  LATFTLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENG 120
           +A +TL  AH    E    AQ LA++A DP LK+ Y  C+ RFD     +E     L  G
Sbjct: 76  VANYTLTFAHTTTVEGLHHAQRLATEATDPLLKQRYSECSRRFDFVTKGLEEAIEALAKG 135

Query: 121 DYNGVNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
            Y  ++    AA+ EAD C++   KPP + S L +  K + DIC I + VSN+L
Sbjct: 136 GYIPLSHATGAAVVEADRCVNMFKKPPPEPSKLPEKAKNIGDICDIAVSVSNIL 189

[Close]

BLAST of CmoCh17G012400 vs. TrEMBL
Match: V4KHV4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011818mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.2e-18
Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 197 AFTNGAPFTICKKTRNPSLCFNVLKSA-GTTNLKHLATFTLNLANNKAAQSCALAQSLAS 256
           A T+    TIC KT NPS C N L S  G+ NL+ LA  TL+    +A Q+    QS+  
Sbjct: 25  AITSSEMSTICDKTLNPSFCLNFLNSNFGSPNLQALAKTTLDSTQARAKQTFKRLQSIID 84

Query: 257 KAVDPRLKELYATCVEHYNNVVVVIEGAKSNLGKGDYNGVNIQASRAMTEASDCLDNFTQ 316
             VDPR K  Y +C++ Y N +  +E A  +L  GD  G+NI+ S A+  A  CLD+  +
Sbjct: 85  GGVDPRSKLAYRSCLDEYENTIGNLEEAFEHLASGDGAGMNIKVSAALDGADACLDDVKR 144

Query: 317 PPKDPSTLSGNGKAVEDICSIVLVIANLLLGRA 349
                S +  N K +++ C I LVI+N+L  RA
Sbjct: 145 LRSVDSAVLNNSKGIKNFCGIALVISNMLPRRA 177

[Close]

BLAST of CmoCh17G012400 vs. TAIR10
Match: AT1G48020.1 (AT1G48020.1 pectin methylesterase inhibitor 1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19
Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 1


Query: 180 AFVLSLLFSNGVVPMHAAFTNGAPFTICKKTRNPSLCFNVLKSA-GTTNLKHLATFTLNL 239
           AF+ SL+F   ++    A T+    TIC KT NPS C   L +   + NL+ LA  TL+ 
Sbjct: 9   AFLSSLMFLL-LIGSSYAITSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDS 68

Query: 240 ANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVVVVIEGAKSNLGKGDYNGVNIQ 299
              +A Q+    QS+    VDPR K  Y +CV+ Y + +  +E A  +L  GD  G+N++
Sbjct: 69  TQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMK 128

Query: 300 ASRAMTEASDCLDNFTQPPKDPSTLSGNGKAVEDICSIVLVIANLL 345
            S A+  A  CLD+  +     S++  N K ++++C I LVI+N+L
Sbjct: 129 VSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNML 173

[Close]

BLAST of CmoCh17G012400 vs. TAIR10
Match: AT3G17220.1 (AT3G17220.1 pectin methylesterase inhibitor 2)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-17
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 1


Query: 175 VSSLLAFVLSLLFSNGVVPMHAAFTNGAPFTICKKTRNPSLCFNVLKSAGTTN---LKHL 234
           +SSL+ FV++   +  V  + A         IC K +N S C + +KS   T+   L+ L
Sbjct: 11  MSSLMFFVMTGSLNAQVADIKA---------ICGKAKNQSFCTSYMKSNPKTSGADLQTL 70

Query: 235 ATFTLNLANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVVVVIEGAKSNLGKGD 294
           A  T   A   A++     QSL   A +P +K+ Y +CV+HY + +  +  AK +L  GD
Sbjct: 71  ANITFGSAQTSASEGFRKIQSLVKTATNPTMKKAYTSCVQHYKSAISSLNDAKQSLASGD 130

Query: 295 YNGVNIQASRAMTEASDCLDNFTQPPKDPSTLSGNGKAVEDICSIVLVIANLL 345
             G+NI+ S AM   S C  +      DPS +  +G   ++IC IVLVI+N++
Sbjct: 131 GKGLNIKVSAAMEGPSTCEQDMADFKVDPSAVKNSGD-FQNICGIVLVISNMM 173

[Close]

BLAST of CmoCh17G012400 vs. TAIR10
Match: AT3G14300.1 (AT3G14300.1 pectinesterase family protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 71/329 (21.58%), Postives = 132/329 (40.12%), Query Frame = 1


Query: 26  SPNDVVSTICPKTRNPSFCSNV---LKSAGTSDLKGLATFTLNLAHDKATESRALAQSLA 85
           +P   +  +C  TR P+ C +    L S+ T+D + L   +L +  ++      L + LA
Sbjct: 266 TPAASLRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLA 325

Query: 86  SKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLEN-GD---------YNGVNTYASAAMT 145
            +  D +LK     C   F+DA+D +    S +E  GD          + + T+ SAA+T
Sbjct: 326 EETDDERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVT 385

Query: 146 EADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLLIGVSSLLAFVLSLLFSNGVV 205
           + D CLD+L +  ++ +  ++          I L + + ++      +  L+++    + 
Sbjct: 386 DHDTCLDALDELSQNKTEYANS--------PISLKLKSAMVNSRKFTSNSLAIIAKFPIH 445

Query: 206 PMHAAFT-----------NGAPFTICKKTRNPSLCFNVLK----SAGTTNLKHLATFTLN 265
             H   +           +    T+C  T  P+ C + +     S  TT+ K L   +L 
Sbjct: 446 ERHGVQSPRLRKSPHPTPSSVLRTVCNVTNYPASCISSISKLPLSKTTTDPKVLFRLSLQ 505

Query: 266 LANNKAAQSCALAQSLASKAVDPRLKELYATCVEHYNNVV-----------VVIEGAKSN 316
           +  ++      L + LA +  D  LK   + C + ++  V            VI G K N
Sbjct: 506 VTFDELNSIVGLPKKLAEETNDEGLKSALSVCADVFDLAVDSVNDTISSLDEVISGGKKN 565

[Close]

BLAST of CmoCh17G012400 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 4.6e-42
Identity = 97/166 (58.43%), Postives = 118/166 (71.08%), Query Frame = 1


Query: 10  SSLFVLS---ILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLATFTLNL 69
           S LF++S   +L    N  S  DVVSTICPKT NP FCS+VLKSAGT+DLKGLA +TLNL
Sbjct: 13  SCLFIVSLIGVLLFTINVASSTDVVSTICPKTSNPQFCSSVLKSAGTTDLKGLAVYTLNL 72

Query: 70  AHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDYNGVNTY 129
           AH  A +S  LA SLA    +P+LK+ Y +C   +D+AV DIE V+ +L  GD+NGVN  
Sbjct: 73  AHTNARKSLTLANSLAKTTTNPQLKQRYSSCVESYDEAVGDIENVQKDLALGDFNGVNIV 132

Query: 130 ASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
            S AMTE DDC D   +PPKD+S L  +GKT+ DICSIILV+SNLL
Sbjct: 133 TSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDICSIILVISNLL 178

[Close]

BLAST of CmoCh17G012400 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 6.0e-42
Identity = 97/172 (56.40%), Postives = 121/172 (70.35%), Query Frame = 1


Query: 1   MANSIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLA 60
           MAN+  L + SL  + +     N  S NDVVSTICPKT NP FCS+VLKSAGT+DLKGLA
Sbjct: 1   MANNSCLVIVSLIGVLLFTIISNVASSNDVVSTICPKTSNPPFCSSVLKSAGTTDLKGLA 60

Query: 61  TFTLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDY 120
            + LNLAH  A ES  LA+SL +   +P+LK+ Y +CA  +D+AV DIE  + +L  GD+
Sbjct: 61  VYILNLAHTNARESLTLAKSLTTTTTNPQLKQRYSSCAKSYDEAVGDIENGQKDLALGDF 120

Query: 121 NGVNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
           N VN   S AMTE DDC D  ++PPKD+S L  +GKT+ DICSIILV+SNLL
Sbjct: 121 NAVNIVTSGAMTEIDDCQDKFSQPPKDTSLLLKNGKTLNDICSIILVISNLL 172

[Close]

BLAST of CmoCh17G012400 vs. NCBI nr
Match: gi|659117593|ref|XP_008458683.1| (PREDICTED: pectinesterase inhibitor [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 5.1e-41
Identity = 95/172 (55.23%), Postives = 119/172 (69.19%), Query Frame = 1


Query: 1   MANSIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLA 60
           MAN+  L + SL  + +L    N  S  D+VSTICPKT NP FCS+VLKSAGT+DLKGLA
Sbjct: 1   MANNSCLVIVSL--IGVLLFTINVASSTDIVSTICPKTSNPPFCSSVLKSAGTTDLKGLA 60

Query: 61  TFTLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDY 120
            +TLN AH  A +S  LA SLA    +P+LK+ Y +C   +D+A+ DIE  + +L  GD+
Sbjct: 61  VYTLNFAHTNARKSLTLASSLAKTTPNPQLKQRYSSCTESYDEAIGDIENAQKDLALGDF 120

Query: 121 NGVNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
           NGVN   S AMT  DDC D L +PPKD+S L  +GKT+ DICSIILV+SNLL
Sbjct: 121 NGVNIVTSGAMTGIDDCQDKLAQPPKDTSLLLKNGKTLNDICSIILVISNLL 170

[Close]

BLAST of CmoCh17G012400 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 1


Query: 1   MANSIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLA 60
           M N+  + + SL  + +     N  S NDV+S ICPKT NP FCS+VLKSAGT+DLKGLA
Sbjct: 1   MTNNSCIVIVSLIGVILFTIISNVASSNDVISIICPKTSNPPFCSSVLKSAGTTDLKGLA 60

Query: 61  TFTLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDY 120
            +TLNLAH  A +S  LA+SLA+   +P+LK+ Y +C   +D+AV DIE  + +L  GD+
Sbjct: 61  VYTLNLAHTNACKSLTLAKSLATTTTNPQLKQRYSSCFESYDEAVGDIENAQKDLALGDF 120

Query: 121 NGVNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
           N VN   S AMTE DDC D   +PPKD+S L  +GKT+ DICSIILV+SNLL
Sbjct: 121 NAVNIVTSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDICSIILVISNLL 172

[Close]

BLAST of CmoCh17G012400 vs. NCBI nr
Match: gi|659113905|ref|XP_008456811.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 2.5e-40
Identity = 95/172 (55.23%), Postives = 120/172 (69.77%), Query Frame = 1


Query: 1   MANSIVLAVSSLFVLSILFSNGNATSPNDVVSTICPKTRNPSFCSNVLKSAGTSDLKGLA 60
           MAN+  L + SL  + +     N  S NDVVSTICPKT NPSFCS+VLKSAGT+DLKGLA
Sbjct: 1   MANNSCLIIVSLVGVLLFTIISNVASSNDVVSTICPKTSNPSFCSSVLKSAGTTDLKGLA 60

Query: 61  TFTLNLAHDKATESRALAQSLASKAADPKLKEHYDTCAGRFDDAVDDIEGVKSNLENGDY 120
            +TLNLAH  A +S  LA+ LA+   +P+LK+ Y +CA  +D+ V DIE  + +L  GD+
Sbjct: 61  VYTLNLAHTNAHKSLTLAKLLATTTTNPQLKQRYSSCAESYDETVGDIENAQKDLALGDF 120

Query: 121 NGVNTYASAAMTEADDCLDSLTKPPKDSSALSDDGKTVEDICSIILVVSNLL 173
           N VN   S AMTE DDC D   +PPKD+S L  +GKT+ DI +IILV+SNLL
Sbjct: 121 NAVNIVTSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDIYNIILVISNLL 172

The following BLAST results are available for this feature:

BLAST of CmoCh17G012400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PMEI_ACTDE	4.2e-27	43.18	Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2	[more]
PMEI1_ARATH	2.7e-18	35.54	Pectinesterase inhibitor 1 OS=Arabidopsis thaliana GN=PMEI1 PE=1 SV=1	[more]
PMEI2_ARATH	2.5e-16	33.53	Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1	[more]
PME26_ARATH	2.1e-07	21.58	Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=P...	[more]

BLAST of CmoCh17G012400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCV8_CUCSA	3.3e-39	55.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1	[more]
A0A0A0KEW6_CUCSA	1.3e-35	53.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1	[more]
A0A0A0KCC4_CUCSA	5.1e-24	40.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1	[more]
A0A0A0KHY0_CUCSA	5.7e-23	39.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1	[more]
V4KHV4_EUTSA	4.2e-18	39.22	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011818mg PE=4 SV=1	[more]

BLAST of CmoCh17G012400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48020.1	1.5e-19	35.54	pectin methylesterase inhibitor 1	[more]
AT3G17220.1	1.4e-17	33.53	pectin methylesterase inhibitor 2	[more]
AT3G14300.1	1.2e-08	21.58	pectinesterase family protein	[more]

BLAST of CmoCh17G012400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128306\|ref\|XP_008464144.1\|	4.6e-42	58.43	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
gi\|659087170\|ref\|XP_008444309.1\|	6.0e-42	56.40	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
gi\|659117593\|ref\|XP_008458683.1\|	5.1e-41	55.23	PREDICTED: pectinesterase inhibitor [Cucumis melo]	[more]
gi\|659127944\|ref\|XP_008463970.1\|	1.1e-40	54.07	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]
gi\|659113905\|ref\|XP_008456811.1\|	2.5e-40	55.23	PREDICTED: pectinesterase inhibitor-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006501	Pectinesterase_inhib_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004857	enzyme inhibitor activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004857	enzyme inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G012400.1	CmoCh17G012400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	GENE3D	G3DSA:1.20.140.40		coord: 28..172 score: 3.3E-34coord: 205..344 score: 1.7
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 205..340 score: 5.4E-17coord: 30..166 score: 1.3
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 198..340 score: 1.6E-23coord: 26..168 score: 4.3
IPR006501	Pectinesterase inhibitor domain	TIGRFAMs	TIGR01614	TIGR01614	coord: 1..172 score: 6.4E-31coord: 176..344 score: 4.0
IPR006501	Pectinesterase inhibitor domain	unknown	SSF101148	Plant invertase/pectin methylesterase inhibitor	coord: 205..345 score: 3.27E-28coord: 28..173 score: 1.27
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 1..177 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G012400	CmaCh17G012690	Cucurbita maxima (Rimu)	cmacmoB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G012400	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G012400	Cucurbita pepo (Zucchini)	cmocpeB343
CmoCh17G012400	Bottle gourd (USVL1VR-Ls)	cmolsiB334
CmoCh17G012400	Cucumber (Gy14) v2	cgybcmoB903
CmoCh17G012400	Melon (DHL92) v3.6.1	cmomedB360
CmoCh17G012400	Silver-seed gourd	carcmoB0112
CmoCh17G012400	Cucumber (Chinese Long) v3	cmocucB0450
CmoCh17G012400	Watermelon (97103) v2	cmowmbB373
CmoCh17G012400	Wax gourd	cmowgoB0492
CmoCh17G012400	Cucurbita moschata (Rifu)	cmocmoB311
CmoCh17G012400	Cucumber (Gy14) v1	cgycmoB0134
CmoCh17G012400	Cucurbita maxima (Rimu)	cmacmoB888
CmoCh17G012400	Wild cucumber (PI 183967)	cmocpiB377
CmoCh17G012400	Cucumber (Chinese Long) v2	cmocuB374
CmoCh17G012400	Melon (DHL92) v3.5.1	cmomeB314
CmoCh17G012400	Watermelon (Charleston Gray)	cmowcgB302
CmoCh17G012400	Watermelon (97103) v1	cmowmB325