CmoCh17G012390 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGCAGCTTTTCGAGACGATGTCTTGAAATCTGCTTGCACCATAGACCTGAAAGGGCTAGCCACCTTCACCCTTGACCTCGCCCACAACAAAGCTGTTGAAACCCGTGCCCTTGCCCAATCCTTGGCGTCCAAGGCTGCTGATCCCAAGCTTAAGGAGCGCTATGCTACCTGTGTTGAACTCTACGATGATGCCGTCGACCACATCGAGGATGGGAAGGACAACTTGGGGGAAGGTGACTACATTGGCCTTAATATTAAGGCGTTTGCAGCCATGACGGAGGCCAGCGACGGTCTCGACAACTTCACGCAGTCGCTGAAGGACCCATCGGTGCTGCCTGCCAACGGGAAGGCTGTGGAAGATATTAGTTGCATCATCTTGGTTATAGCCAATCTTCTTCTTGGCCGTGCCTAA ATGCATGCAGCTTTTCGAGACGATGTCTTGAAATCTGCTTGCACCATAGACCTGAAAGGGCTAGCCACCTTCACCCTTGACCTCGCCCACAACAAAGCTGTTGAAACCCGTGCCCTTGCCCAATCCTTGGCGTCCAAGGCTGCTGATCCCAAGCTTAAGGAGCGCTATGCTACCTGTGTTGAACTCTACGATGATGCCGTCGACCACATCGAGGATGGGAAGGACAACTTGGGGGAAGGTGACTACATTGGCCTTAATATTAAGGCGTTTGCAGCCATGACGGAGGCCAGCGACGGTCTCGACAACTTCACGCAGTCGCTGAAGGACCCATCGGTGCTGCCTGCCAACGGGAAGGCTGTGGAAGATATTAGTTGCATCATCTTGGTTATAGCCAATCTTCTTCTTGGCCGTGCCTAA ATGCATGCAGCTTTTCGAGACGATGTCTTGAAATCTGCTTGCACCATAGACCTGAAAGGGCTAGCCACCTTCACCCTTGACCTCGCCCACAACAAAGCTGTTGAAACCCGTGCCCTTGCCCAATCCTTGGCGTCCAAGGCTGCTGATCCCAAGCTTAAGGAGCGCTATGCTACCTGTGTTGAACTCTACGATGATGCCGTCGACCACATCGAGGATGGGAAGGACAACTTGGGGGAAGGTGACTACATTGGCCTTAATATTAAGGCGTTTGCAGCCATGACGGAGGCCAGCGACGGTCTCGACAACTTCACGCAGTCGCTGAAGGACCCATCGGTGCTGCCTGCCAACGGGAAGGCTGTGGAAGATATTAGTTGCATCATCTTGGTTATAGCCAATCTTCTTCTTGGCCGTGCCTAA
BLAST of CmoCh17G012390 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16 Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 1
BLAST of CmoCh17G012390 vs. Swiss-Prot
Match: PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.2e-11 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1
BLAST of CmoCh17G012390 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.6e-24 Identity = 66/129 (51.16%), Postives = 84/129 (65.12%), Query Frame = 1
BLAST of CmoCh17G012390 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.9e-22 Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 1
BLAST of CmoCh17G012390 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17 Identity = 57/131 (43.51%), Postives = 83/131 (63.36%), Query Frame = 1
BLAST of CmoCh17G012390 vs. TrEMBL
Match: K4CUX1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.1e-13 Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 1
BLAST of CmoCh17G012390 vs. TrEMBL
Match: K4BK72_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-12 Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 1
BLAST of CmoCh17G012390 vs. TAIR10
Match: AT3G17220.1 (AT3G17220.1 pectin methylesterase inhibitor 2) HSP 1 Score: 68.2 bits (165), Expect = 4.6e-12 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1
BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25 Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = 1
BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1
BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659113897|ref|XP_008456805.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24 Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1
BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24 Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|778722211|ref|XP_004148234.2| (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 3.8e-24 Identity = 66/129 (51.16%), Postives = 84/129 (65.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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