CmoCh17G012390 (gene) Cucurbita moschata (Rifu)

NameCmoCh17G012390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPectinesterase inhibitor 1
LocationCmo_Chr17 : 9839461 .. 9839877 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGCAGCTTTTCGAGACGATGTCTTGAAATCTGCTTGCACCATAGACCTGAAAGGGCTAGCCACCTTCACCCTTGACCTCGCCCACAACAAAGCTGTTGAAACCCGTGCCCTTGCCCAATCCTTGGCGTCCAAGGCTGCTGATCCCAAGCTTAAGGAGCGCTATGCTACCTGTGTTGAACTCTACGATGATGCCGTCGACCACATCGAGGATGGGAAGGACAACTTGGGGGAAGGTGACTACATTGGCCTTAATATTAAGGCGTTTGCAGCCATGACGGAGGCCAGCGACGGTCTCGACAACTTCACGCAGTCGCTGAAGGACCCATCGGTGCTGCCTGCCAACGGGAAGGCTGTGGAAGATATTAGTTGCATCATCTTGGTTATAGCCAATCTTCTTCTTGGCCGTGCCTAA

mRNA sequence

ATGCATGCAGCTTTTCGAGACGATGTCTTGAAATCTGCTTGCACCATAGACCTGAAAGGGCTAGCCACCTTCACCCTTGACCTCGCCCACAACAAAGCTGTTGAAACCCGTGCCCTTGCCCAATCCTTGGCGTCCAAGGCTGCTGATCCCAAGCTTAAGGAGCGCTATGCTACCTGTGTTGAACTCTACGATGATGCCGTCGACCACATCGAGGATGGGAAGGACAACTTGGGGGAAGGTGACTACATTGGCCTTAATATTAAGGCGTTTGCAGCCATGACGGAGGCCAGCGACGGTCTCGACAACTTCACGCAGTCGCTGAAGGACCCATCGGTGCTGCCTGCCAACGGGAAGGCTGTGGAAGATATTAGTTGCATCATCTTGGTTATAGCCAATCTTCTTCTTGGCCGTGCCTAA

Coding sequence (CDS)

ATGCATGCAGCTTTTCGAGACGATGTCTTGAAATCTGCTTGCACCATAGACCTGAAAGGGCTAGCCACCTTCACCCTTGACCTCGCCCACAACAAAGCTGTTGAAACCCGTGCCCTTGCCCAATCCTTGGCGTCCAAGGCTGCTGATCCCAAGCTTAAGGAGCGCTATGCTACCTGTGTTGAACTCTACGATGATGCCGTCGACCACATCGAGGATGGGAAGGACAACTTGGGGGAAGGTGACTACATTGGCCTTAATATTAAGGCGTTTGCAGCCATGACGGAGGCCAGCGACGGTCTCGACAACTTCACGCAGTCGCTGAAGGACCCATCGGTGCTGCCTGCCAACGGGAAGGCTGTGGAAGATATTAGTTGCATCATCTTGGTTATAGCCAATCTTCTTCTTGGCCGTGCCTAA
BLAST of CmoCh17G012390 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16
Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 1

Query: 17  DLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYDDAVDHIEDGKDN 76
           DLKGL  F++D+A   A +T  +  SL ++A DPKLK RY TC E Y DA+D +   K  
Sbjct: 64  DLKGLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQF 123

Query: 77  LGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDISCIILVIANLLLG 136
           L  GDY  LNI A AA   A    D+F      P+ L      +ED+  I+LVI+NLL G
Sbjct: 124 LTSGDYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLPG 183

BLAST of CmoCh17G012390 vs. Swiss-Prot
Match: PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.2e-11
Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1

Query: 17  DLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYDDAVDHIEDGKDN 76
           DL+ LA  T   A   A E     QSL   A +P +K+ Y +CV+ Y  A+  + D K +
Sbjct: 57  DLQTLANITFGSAQTSASEGFRKIQSLVKTATNPTMKKAYTSCVQHYKSAISSLNDAKQS 116

Query: 77  LGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDISCIILVIANLL 135
           L  GD  GLNIK  AAM   S    +      DPS +  +G   ++I  I+LVI+N++
Sbjct: 117 LASGDGKGLNIKVSAAMEGPSTCEQDMADFKVDPSAVKNSGD-FQNICGIVLVISNMM 173

BLAST of CmoCh17G012390 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-24
Identity = 66/129 (51.16%), Postives = 84/129 (65.12%), Query Frame = 1

Query: 5   FRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYD 64
           F   VLKSA T DLKGL  +TL+LAH  A ++  LA SLA  A +P+LK+RY++CVE YD
Sbjct: 43  FCSSVLKSAGTTDLKGLVVYTLNLAHTNAGKSLTLANSLAKTATNPQLKQRYSSCVESYD 102

Query: 65  DAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDIS 124
           +AV  IE+ + +L   D+ G+NI    AMT   D  D F Q  KD S+L  NGK + DI 
Sbjct: 103 EAVGDIENAQKDLAVEDFNGVNIVTSGAMTNIGDCQDKFAQPPKDTSLLLENGKTINDIC 162

Query: 125 CIILVIANL 134
            IILVI+NL
Sbjct: 163 SIILVISNL 171

BLAST of CmoCh17G012390 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-22
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 1

Query: 8   DVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYDDAV 67
           DVLKSA + DLK LAT+TL+LA+  A+++  LA+SLA+   +P LK +Y +C E Y++A 
Sbjct: 56  DVLKSAGSTDLKVLATYTLNLANENALKSTNLAKSLAAMTTNPPLKNQYLSCYESYEEAT 115

Query: 68  DHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDISCII 127
             IE+ K NL  GD+ G+NI     MT  SD LD+F Q   DPS+L  +GK + D+  II
Sbjct: 116 SDIENAKSNLASGDFNGVNIATSGVMTSVSDCLDSFKQLRIDPSLL-KDGKTLNDVCSII 175

Query: 128 LVIANLL 135
           LVI+NLL
Sbjct: 176 LVISNLL 181

BLAST of CmoCh17G012390 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 57/131 (43.51%), Postives = 83/131 (63.36%), Query Frame = 1

Query: 4   AFRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELY 63
           +F   +L++A  IDLK L  ++L LAH  A ++  LA++LA    +  LK++Y  C E Y
Sbjct: 48  SFCASILENANNIDLKALIAYSLKLAHTNAGKSMTLAKALAVLTTNTLLKKQYLFCFENY 107

Query: 64  DDAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDI 123
           D+A+  IE  K++L  GDY G+N+    AM  A D  D+F Q LKD S+LP N K ++DI
Sbjct: 108 DEAMCDIEKAKNDLVFGDYSGVNLAISDAMMIADDCHDSFKQPLKDMSLLPNNTKMLKDI 167

Query: 124 SCIILVIANLL 135
             IILVI+++L
Sbjct: 168 YSIILVISSIL 178

BLAST of CmoCh17G012390 vs. TrEMBL
Match: K4CUX1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-13
Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 1

Query: 17  DLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYDDAVDHIEDGKDN 76
           +L+GLAT ++D++      T  L  +L  +A DPKLK RY++C+E Y+D +D +      
Sbjct: 37  NLEGLATISIDISLKNMQSTHDLVDTLLKQATDPKLKTRYSSCLENYNDGIDDLRGLPGF 96

Query: 77  LGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDISCIILVIANLLLG 136
           L   DY GLNI A AA  ++S   DNF+    +P  L A    ++ +  IILVI+NLL G
Sbjct: 97  LKSKDYAGLNIHASAAFDDSSTCDDNFSDPPAEPPQLKAASDKLQGLIDIILVISNLLKG 156

BLAST of CmoCh17G012390 vs. TrEMBL
Match: K4BK72_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-12
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 1

Query: 17  DLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYDDAVDHIEDGKDN 76
           +L+GLAT ++DL+         L  +L  +A DPKLK RY++C+E Y+D +D +      
Sbjct: 54  NLQGLATISIDLSLKNMQSAHDLVNTLLKQATDPKLKTRYSSCLENYNDGIDELRGLPAL 113

Query: 77  LGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDISCIILVIANLL 135
           L  GDY GLNI A AA+ + S   DNF+    +   L A    V+ +  IILVI+NLL
Sbjct: 114 LKSGDYSGLNIHASAALDDPSTCDDNFSGPPAEAPQLKAASDKVQGLIGIILVISNLL 171

BLAST of CmoCh17G012390 vs. TAIR10
Match: AT3G17220.1 (AT3G17220.1 pectin methylesterase inhibitor 2)

HSP 1 Score: 68.2 bits (165), Expect = 4.6e-12
Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1

Query: 17  DLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYDDAVDHIEDGKDN 76
           DL+ LA  T   A   A E     QSL   A +P +K+ Y +CV+ Y  A+  + D K +
Sbjct: 57  DLQTLANITFGSAQTSASEGFRKIQSLVKTATNPTMKKAYTSCVQHYKSAISSLNDAKQS 116

Query: 77  LGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDISCIILVIANLL 135
           L  GD  GLNIK  AAM   S    +      DPS +  +G   ++I  I+LVI+N++
Sbjct: 117 LASGDGKGLNIKVSAAMEGPSTCEQDMADFKVDPSAVKNSGD-FQNICGIVLVISNMM 173

BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25
Identity = 69/130 (53.08%), Postives = 87/130 (66.92%), Query Frame = 1

Query: 5   FRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYD 64
           F   VLKSA T DLKGLA +TL+LAH  A ++  LA SLA    +P+LK+RY++CVE YD
Sbjct: 49  FCSSVLKSAGTTDLKGLAVYTLNLAHTNARKSLTLANSLAKTTTNPQLKQRYSSCVESYD 108

Query: 65  DAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDIS 124
           +AV  IE+ + +L  GD+ G+NI    AMTE  D  D F Q  KD S+L  NGK + DI 
Sbjct: 109 EAVGDIENVQKDLALGDFNGVNIVTSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDIC 168

Query: 125 CIILVIANLL 135
            IILVI+NLL
Sbjct: 169 SIILVISNLL 178

BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1

Query: 5   FRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYD 64
           F   VLKSA T DLKGLA +TL+LAH  A ++  LA+SLA+   +P+LK+RY++C E YD
Sbjct: 43  FCSSVLKSAGTTDLKGLAVYTLNLAHTNACKSLTLAKSLATTTTNPQLKQRYSSCFESYD 102

Query: 65  DAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDIS 124
           +AV  IE+ + +L  GD+  +NI    AMTE  D  D F Q  KD S+L  NGK + DI 
Sbjct: 103 EAVGDIENAQKDLALGDFNAVNIVTSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDIC 162

Query: 125 CIILVIANLL 135
            IILVI+NLL
Sbjct: 163 SIILVISNLL 172

BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659113897|ref|XP_008456805.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24
Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 1

Query: 5   FRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYD 64
           F   VLKS  T DLKGL  +TL+LAH  A ++  LA+ LA+   +P+LK+RY++C E YD
Sbjct: 43  FCSSVLKSVGTTDLKGLVVYTLNLAHTNARKSLTLAKLLATTTTNPQLKQRYSSCAESYD 102

Query: 65  DAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDIS 124
           +AV  IE+ + +L  GD+  +NI    AMTE  D  D FTQ LKD S+L  NGK + DI 
Sbjct: 103 EAVGDIENAQKDLALGDFNAVNIATSGAMTEIDDCQDKFTQPLKDTSLLLKNGKTLNDIC 162

Query: 125 CIILVIANLL 135
            IILVI+NLL
Sbjct: 163 NIILVISNLL 172

BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24
Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1

Query: 5   FRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYD 64
           F   VLKSA T DLKGLA + L+LAH  A E+  LA+SL +   +P+LK+RY++C + YD
Sbjct: 43  FCSSVLKSAGTTDLKGLAVYILNLAHTNARESLTLAKSLTTTTTNPQLKQRYSSCAKSYD 102

Query: 65  DAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDIS 124
           +AV  IE+G+ +L  GD+  +NI    AMTE  D  D F+Q  KD S+L  NGK + DI 
Sbjct: 103 EAVGDIENGQKDLALGDFNAVNIVTSGAMTEIDDCQDKFSQPPKDTSLLLKNGKTLNDIC 162

Query: 125 CIILVIANLL 135
            IILVI+NLL
Sbjct: 163 SIILVISNLL 172

BLAST of CmoCh17G012390 vs. NCBI nr
Match: gi|778722211|ref|XP_004148234.2| (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 3.8e-24
Identity = 66/129 (51.16%), Postives = 84/129 (65.12%), Query Frame = 1

Query: 5   FRDDVLKSACTIDLKGLATFTLDLAHNKAVETRALAQSLASKAADPKLKERYATCVELYD 64
           F   VLKSA T DLKGL  +TL+LAH  A ++  LA SLA  A +P+LK+RY++CVE YD
Sbjct: 43  FCSSVLKSAGTTDLKGLVVYTLNLAHTNAGKSLTLANSLAKTATNPQLKQRYSSCVESYD 102

Query: 65  DAVDHIEDGKDNLGEGDYIGLNIKAFAAMTEASDGLDNFTQSLKDPSVLPANGKAVEDIS 124
           +AV  IE+ + +L   D+ G+NI    AMT   D  D F Q  KD S+L  NGK + DI 
Sbjct: 103 EAVGDIENAQKDLAVEDFNGVNIVTSGAMTNIGDCQDKFAQPPKDTSLLLENGKTINDIC 162

Query: 125 CIILVIANL 134
            IILVI+NL
Sbjct: 163 SIILVISNL 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PMEI_ACTDE1.0e-1644.17Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2[more]
PMEI2_ARATH8.2e-1136.44Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KCV8_CUCSA2.6e-2451.16Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1[more]
A0A0A0KEW6_CUCSA1.9e-2249.61Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1[more]
A0A0A0KCC4_CUCSA1.4e-1743.51Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1[more]
K4CUX1_SOLLC2.1e-1340.00Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
K4BK72_SOLLC1.0e-1240.68Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G17220.14.6e-1236.44 pectin methylesterase inhibitor 2[more]
Match NameE-valueIdentityDescription
gi|659128306|ref|XP_008464144.1|2.6e-2553.08PREDICTED: pectinesterase inhibitor-like [Cucumis melo][more]
gi|659127944|ref|XP_008463970.1|7.7e-2551.54PREDICTED: pectinesterase inhibitor-like [Cucumis melo][more]
gi|659113897|ref|XP_008456805.1|2.2e-2450.77PREDICTED: pectinesterase inhibitor-like [Cucumis melo][more]
gi|659087170|ref|XP_008444309.1|2.2e-2450.77PREDICTED: pectinesterase inhibitor-like [Cucumis melo][more]
gi|778722211|ref|XP_004148234.2|3.8e-2451.16PREDICTED: pectinesterase inhibitor-like [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006501Pectinesterase_inhib_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G012390.1CmoCh17G012390.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainGENE3DG3DSA:1.20.140.40coord: 12..134
score: 4.3
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 17..125
score: 4.0
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 5..130
score: 3.
IPR006501Pectinesterase inhibitor domainTIGRFAMsTIGR01614TIGR01614coord: 15..134
score: 6.5
IPR006501Pectinesterase inhibitor domainunknownSSF101148Plant invertase/pectin methylesterase inhibitorcoord: 14..135
score: 1.44
NoneNo IPR availablePANTHERPTHR31080FAMILY NOT NAMEDcoord: 11..137
score: 1.2
NoneNo IPR availablePANTHERPTHR31080:SF17PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR DOMAIN-CONTAINING PROTEINcoord: 11..137
score: 1.2

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh17G012390CmaCh17G012660Cucurbita maxima (Rimu)cmacmoB353
The following gene(s) are paralogous to this gene:

None