CmoCh17G012370 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGCAGCTTCCTCAGACGACGTCGTTTCCACCATCTGCAATTCCACCATCTGCAAGAAAACTAGAAACCTTTCTATTTGCTTTAACGTGTTGAAATCTGCTGGCACCACAGACCTAAAAGGGCTGGCCACCTTCACCCTCAACCTCGCCCACGACAAGACTATTGGAAACCGTGCCCTCGCCCAGTCCTTGGCGTCCAAGGTCGCGGATCCCGATCTTAAGGAGCGCTATGACACTTGTGTCGAACGCTACAACGATGCCGTCAAGGACATCGAGGGTGCGAAGGGCTACTTGGGGAAAGGTGACTATAAAGGGCTCAACACTTATACTTTTGGAGCCATGACGGAGGTCGATGCCTGTCTGTTCAGCCTTTCGAAGCTGCCAAAGGACTCATCGACGCTCCCGGGCAATGGGAAGGCCGTTGAAGATATTTATAGTATCATCTTGGTTATAGCCAATCTTCTTCTTGGGCATGCCTAA ATGCATGCAGCTTCCTCAGACGACGTCGTTTCCACCATCTGCAATTCCACCATCTGCAAGAAAACTAGAAACCTTTCTATTTGCTTTAACGTGTTGAAATCTGCTGGCACCACAGACCTAAAAGGGCTGGCCACCTTCACCCTCAACCTCGCCCACGACAAGACTATTGGAAACCGTGCCCTCGCCCAGTCCTTGGCGTCCAAGGTCGCGGATCCCGATCTTAAGGAGCGCTATGACACTTGTGTCGAACGCTACAACGATGCCGTCAAGGACATCGAGGGTGCGAAGGGCTACTTGGGGAAAGGTGACTATAAAGGGCTCAACACTTATACTTTTGGAGCCATGACGGAGGTCGATGCCTGTCTGTTCAGCCTTTCGAAGCTGCCAAAGGACTCATCGACGCTCCCGGGCAATGGGAAGGCCGTTGAAGATATTTATAGTATCATCTTGGTTATAGCCAATCTTCTTCTTGGGCATGCCTAA ATGCATGCAGCTTCCTCAGACGACGTCGTTTCCACCATCTGCAATTCCACCATCTGCAAGAAAACTAGAAACCTTTCTATTTGCTTTAACGTGTTGAAATCTGCTGGCACCACAGACCTAAAAGGGCTGGCCACCTTCACCCTCAACCTCGCCCACGACAAGACTATTGGAAACCGTGCCCTCGCCCAGTCCTTGGCGTCCAAGGTCGCGGATCCCGATCTTAAGGAGCGCTATGACACTTGTGTCGAACGCTACAACGATGCCGTCAAGGACATCGAGGGTGCGAAGGGCTACTTGGGGAAAGGTGACTATAAAGGGCTCAACACTTATACTTTTGGAGCCATGACGGAGGTCGATGCCTGTCTGTTCAGCCTTTCGAAGCTGCCAAAGGACTCATCGACGCTCCCGGGCAATGGGAAGGCCGTTGAAGATATTTATAGTATCATCTTGGTTATAGCCAATCTTCTTCTTGGGCATGCCTAA
BLAST of CmoCh17G012370 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19 Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = 1
BLAST of CmoCh17G012370 vs. Swiss-Prot
Match: PMEI1_ARATH (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana GN=PMEI1 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13 Identity = 46/142 (32.39%), Postives = 71/142 (50.00%), Query Frame = 1
BLAST of CmoCh17G012370 vs. Swiss-Prot
Match: PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12 Identity = 46/142 (32.39%), Postives = 67/142 (47.18%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.0e-32 Identity = 80/154 (51.95%), Postives = 100/154 (64.94%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28 Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.5e-20 Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TrEMBL
Match: A0A0A0KHY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.8e-17 Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TrEMBL
Match: K4CUX1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.5e-15 Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TAIR10
Match: AT1G48020.1 (AT1G48020.1 pectin methylesterase inhibitor 1) HSP 1 Score: 77.4 bits (189), Expect = 8.8e-15 Identity = 46/142 (32.39%), Postives = 71/142 (50.00%), Query Frame = 1
BLAST of CmoCh17G012370 vs. TAIR10
Match: AT3G17220.1 (AT3G17220.1 pectin methylesterase inhibitor 2) HSP 1 Score: 74.3 bits (181), Expect = 7.5e-14 Identity = 46/142 (32.39%), Postives = 67/142 (47.18%), Query Frame = 1
BLAST of CmoCh17G012370 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34 Identity = 85/156 (54.49%), Postives = 104/156 (66.67%), Query Frame = 1
BLAST of CmoCh17G012370 vs. NCBI nr
Match: gi|659113905|ref|XP_008456811.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 153.7 bits (387), Expect = 2.8e-34 Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = 1
BLAST of CmoCh17G012370 vs. NCBI nr
Match: gi|659117593|ref|XP_008458683.1| (PREDICTED: pectinesterase inhibitor [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 2.3e-33 Identity = 82/156 (52.56%), Postives = 103/156 (66.03%), Query Frame = 1
BLAST of CmoCh17G012370 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 150.6 bits (379), Expect = 2.3e-33 Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 1
BLAST of CmoCh17G012370 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 2.0e-32 Identity = 81/155 (52.26%), Postives = 102/155 (65.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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