CmoCh17G009470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAACCCTAACCCTGCTTTGCAGAAAATTTTTGGAGGAAGATGACGCAGAAAGCAACCCTATTCAAAGGTCAACAGAAGAGGAAAACAATTCCTCCCAATCGCCATGGAAAAATCCCCCAAACTCGTAAAGGTATCTCTCTGTTCTTTTCCCTCCTTCTTATGCTAAATTTACGCGTAAAAATTACGATTTCTCCTCCTCCGTACTCACTGGGCGTTGTCTTTCCAGGGAAAAGAGTTGTGAAGCCATCAAAGACAACTAAAGAGATGGAAACAGATCGGGTATGTGTTATCTTTTCGTGTTTGTCCGGTAATTTATATGGAATCTAGTAACTGTGAGAGTAGAAACTTATGTTGATAAGTTGTTTTGTTGATGCTTTGTATTTTTAATGTTTCAAATACGAATTTCTTGCTTAATGTTGCATCGCCTTGTTAGTTTGCAATTCGTGTGAACTATTAATCATCCATTGTTTTGGTTAGATGAGAACATTTCTGAATTTTCTTGCCTTCTTATTTCCGAGAATGGATTTTGTGCGTGATTCTTAAGGCCTTTTCTCTTGGCTGAACTTGGTAGTTTCCCAGTTCTTTCAAATTCTACTGTGACATCTCGTAATGTGACTGCAGACTTTTTTGTTTCTACTTCTGCTGCATATATGCATCCATTCACATAATATTGGCCGTGATGAGTATCATCTCTTTGATTATGTTGGTAGCCGTTTGTGAGAAACTTTTCATGGCGAAGGAAAATTTGAAAAGTTTAAGTAAGGGGAAAGGAAGCTTCTCAACTTCACTCTCTAAGAATATGTTTCACCATAAAAAATTTATTTAGAAGCCCATCCAACCAATTATTGTCTACACTGCATCGCTTTGGAAGGATTGGATGAATGCAGAGAAGCAGGTTTCTCCTTTTTTAGGAATGATCTCTTGTGCAAAGATAGGATATCCATTTTTCGTTTGACAGAAAGAAAGTTGAAAAGTTAAGAAGCATTGTGCAAGGCCAAAGAGAGGATAGTTTTGGGTTTGAATAAATCATTCATTTCTAAATTATGAGATATTTGGTTGGTAGACCGAGATTTTATACTGCAGAAATGCTTTTGGGCTTTTGAAAGGAGAGGAGATGAGTAGTATTCTTGATTTGAGCGAAGTCATTTTTGTATATGCCTTTGAAATTTTCTTTGTATGAATTAGTTTTTTTTTCTTTTATCTGGTAATGGGACATTTGGAAAAGTGTCAAGCCTATATTTCCCTTTGCCCTATCTATCGATGACCATAAGCGAGGGAAACATAGTGGTCATGTTTGTGCTTGCCTTTTGTTTCTCTTGTACCTTTCTTTGTGTAAGGCTCCTCCTTTCAAGAGGAAGTATAAATTTCCTTGAACTAATATTAAATTTCGTAGTATGTGGGAGTAGTTAATTCTTAATAAAGAAAAAGAAAAATCTTGTGCAACTCCTTGGTTGTCACCCCTCTTCAAACTAGTCAATATTAATGGAAGGTTTCGTTTCTTATCATACTAAGTTCTTTTCTGGTAACGGCTCAGGCCCATCGTTAGCATATATTGTCGTCTTTGGACTTTCCCATTTGGGCTTCCCCTCAAGGCTTTAAAACACGTCTTCTAGGGAAAGGTTTCTACACTCTTATAAATGTGTATTTCATTCTCCTCCCCAACCAACGTGGGATATCTAATTTCCTATTTTAAAGTTGAGACTAGTATAGAATGGCTATAATGTTTGGGTGTATTCTTCTTCCTTGAAATGCTTTTTTGTTGGAAATCTATAGACTGTGCCGATAATTGTTCGCGTATTGGAATCACAAGCTTTAGATTACTTTTGCCGTTATATGTGGAGAATTTACGTAGTTCTATGAAAAAAAAAAAAACAGGAATTGAGCAAGTTCATCAATTACTGCAACGAGACGAAGGCTGCTACATTAGCAAACAAGGAAGGTGGGCAGCTGAGTATTGTGAAAACGCCGTCGGATGCTGCTGGTAATAGTAATAATGCAGCAAAGAAGTAAAGGAGGAGGATTTAGATTTTTGTGAGAATAGTGTGAAATTATTTGTGATGTTATTTCTTTCCCTTTTATTTTTCCATCTATGTCTTCTAACGCTTTTCTCAATTTTGTCGGCAGTAATCGGTTACTAATATATATATAAATTTGTTTCTACTTTTGTAAAA ATAAACCCTAACCCTGCTTTGCAGAAAATTTTTGGAGGAAGATGACGCAGAAAGCAACCCTATTCAAAGGTCAACAGAAGAGGAAAACAATTCCTCCCAATCGCCATGGAAAAATCCCCCAAACTCGTAAAGGGAAAAGAGTTGTGAAGCCATCAAAGACAACTAAAGAGATGGAAACAGATCGGGAATTGAGCAAGTTCATCAATTACTGCAACGAGACGAAGGCTGCTACATTAGCAAACAAGGAAGGTGGGCAGCTGAGTATTGTGAAAACGCCGTCGGATGCTGCTGGTAATAGTAATAATGCAGCAAAGAAGTAAAGGAGGAGGATTTAGATTTTTGTGAGAATAGTGTGAAATTATTTGTGATGTTATTTCTTTCCCTTTTATTTTTCCATCTATGTCTTCTAACGCTTTTCTCAATTTTGTCGGCAGTAATCGGTTACTAATATATATATAAATTTGTTTCTACTTTTGTAAAA ATGACGCAGAAAGCAACCCTATTCAAAGGTCAACAGAAGAGGAAAACAATTCCTCCCAATCGCCATGGAAAAATCCCCCAAACTCGTAAAGGGAAAAGAGTTGTGAAGCCATCAAAGACAACTAAAGAGATGGAAACAGATCGGGAATTGAGCAAGTTCATCAATTACTGCAACGAGACGAAGGCTGCTACATTAGCAAACAAGGAAGGTGGGCAGCTGAGTATTGTGAAAACGCCGTCGGATGCTGCTGGTAATAGTAATAATGCAGCAAAGAAGTAA
BLAST of CmoCh17G009470 vs. TrEMBL
Match: A0A0A0K6H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420860 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 3.5e-33 Identity = 79/92 (85.87%), Postives = 84/92 (91.30%), Query Frame = 1
BLAST of CmoCh17G009470 vs. TrEMBL
Match: A0A0D2T4A3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G112700 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28 Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 1
BLAST of CmoCh17G009470 vs. TrEMBL
Match: A0A103Y1I3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_020940 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of CmoCh17G009470 vs. TrEMBL
Match: A0A0B0Q2A1_GOSAR (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Gossypium arboreum GN=F383_14725 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28 Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 1
BLAST of CmoCh17G009470 vs. TrEMBL
Match: A0A067LG96_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16872 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-28 Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 1
BLAST of CmoCh17G009470 vs. TAIR10
Match: AT3G52040.1 (AT3G52040.1 unknown protein) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-25 Identity = 60/89 (67.42%), Postives = 69/89 (77.53%), Query Frame = 1
BLAST of CmoCh17G009470 vs. NCBI nr
Match: gi|659122839|ref|XP_008461352.1| (PREDICTED: uncharacterized protein LOC103499958 [Cucumis melo]) HSP 1 Score: 151.0 bits (380), Expect = 1.0e-33 Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 1
BLAST of CmoCh17G009470 vs. NCBI nr
Match: gi|449436335|ref|XP_004135948.1| (PREDICTED: uncharacterized protein LOC101210742 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 5.1e-33 Identity = 79/92 (85.87%), Postives = 84/92 (91.30%), Query Frame = 1
BLAST of CmoCh17G009470 vs. NCBI nr
Match: gi|976914717|gb|KVI00803.1| (hypothetical protein Ccrd_020940 [Cynara cardunculus var. scolymus]) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-28 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of CmoCh17G009470 vs. NCBI nr
Match: gi|802555820|ref|XP_012065619.1| (PREDICTED: uncharacterized protein LOC105628750 [Jatropha curcas]) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-28 Identity = 71/92 (77.17%), Postives = 77/92 (83.70%), Query Frame = 1
BLAST of CmoCh17G009470 vs. NCBI nr
Match: gi|823208272|ref|XP_012437586.1| (PREDICTED: uncharacterized protein LOC105763782 [Gossypium raimondii]) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-28 Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |