CmoCh17G007450 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G007450
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein transport SEC13-like protein
Location	Cmo_Chr17 : 7372046 .. 7372612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTGGGTCTATGTTTGGCATGTGGTTCCTCTGATGGGAATATTTCAGTATTCACTACAAGGCAGGATGGTGGTTGGGATACATCAAGTATTGACCAAGCTCATCCACTTGGTGTCACATCGGTCTCATGGGCCCCTTCATCTGCACCAGGTGCTCTTGAAGGTTCTGGCTTTGTTGATCCTGTTCATAAGCTTTGCTCTGGTGGTTGTGATAACACTGAAGGTTTGGAAACCGTATAATGGAATTTGGAAGATGGACTGTTTCCCTGCACTTCAGATGCATACTGATTGGGTTAGGGACGTCGCATGGGCACCAAACCTCGGGCTACCGAAATCTACTATTGCAAGTGCTTCTCAGGATGGACAGGTTATCATATGGACGGTAGTCTGGGAAGGGGATCAATGGGAAGGGAAGATATTGAATGATTTCAAAACTCCTGTCTGGAGGGTCTCATGGTCTATGACTGGGAACATCTTGGCTGTGGCGGATGGGAACAACAATGTTACCTTGTGGAAGGAGGATGTTGATGGGGACTGGCAACAGGTGACGACTGTTGAGCCATAG

mRNA sequence

ATGAATTGGGTCTATGTTTGGCATGTGGTTCCTCTGATGGGAATATTTCAGTATTCACTACAAGGCAGGATGGTGGTTGGGATACATCAAGTATTGACCAAGCTCATCCACTTGGTGTCACATCGGTCTCATGGGCCCCTTCATCTGCACCAGGTGCTCTTGAAGGTTCTGGCTTTGTTGATCCTGTTCATAAGCTTTGCTCTGGTGGTTGTGATAACACTGAAGGTTTGGAAACCGTATAATGGAATTTGGAAGATGGACTGTTTCCCTGCACTTCAGATGCATACTGATTGGGTTAGGGACGTCGCATGGGCACCAAACCTCGGGCTACCGAAATCTACTATTGCAAGTGCTTCTCAGGATGGACAGGTTATCATATGGACGGTAGTCTGGGAAGGGGATCAATGGGAAGGGAAGATATTGAATGATTTCAAAACTCCTGTCTGGAGGGTCTCATGGTCTATGACTGGGAACATCTTGGCTGTGGCGGATGGGAACAACAATGTTACCTTGTGGAAGGAGGATGTTGATGGGGACTGGCAACAGGTGACGACTGTTGAGCCATAG

Coding sequence (CDS)

ATGAATTGGGTCTATGTTTGGCATGTGGTTCCTCTGATGGGAATATTTCAGTATTCACTACAAGGCAGGATGGTGGTTGGGATACATCAAGTATTGACCAAGCTCATCCACTTGGTGTCACATCGGTCTCATGGGCCCCTTCATCTGCACCAGGTGCTCTTGAAGGTTCTGGCTTTGTTGATCCTGTTCATAAGCTTTGCTCTGGTGGTTGTGATAACACTGAAGGTTTGGAAACCGTATAATGGAATTTGGAAGATGGACTGTTTCCCTGCACTTCAGATGCATACTGATTGGGTTAGGGACGTCGCATGGGCACCAAACCTCGGGCTACCGAAATCTACTATTGCAAGTGCTTCTCAGGATGGACAGGTTATCATATGGACGGTAGTCTGGGAAGGGGATCAATGGGAAGGGAAGATATTGAATGATTTCAAAACTCCTGTCTGGAGGGTCTCATGGTCTATGACTGGGAACATCTTGGCTGTGGCGGATGGGAACAACAATGTTACCTTGTGGAAGGAGGATGTTGATGGGGACTGGCAACAGGTGACGACTGTTGAGCCATAG

Homology

[Close]

BLAST of CmoCh17G007450 vs. Swiss-Prot
Match: SC13B_ARATH (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana GN=SEC13B PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.1e-56
Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG WKMDCFPALQ HTDWVRDVAWAPNLGLPKSTIAS SQDG+VIIWTV  E
Sbjct: 187 TVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTVGKE 246

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           G+QWEGK+L DF TPVWRVSWS+TGN+LAV+DGNNNVT+WKE VDG+W+QVT VEP
Sbjct: 247 GEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAVEP 302

[Close]

BLAST of CmoCh17G007450 vs. Swiss-Prot
Match: SC13A_ARATH (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana GN=SEC13A PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 92/116 (79.31%), Postives = 104/116 (89.66%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG WKMDCFPAL  HTDWVRDVAWAPNLGLPKSTIAS S+DG+VIIWT+  E
Sbjct: 187 TVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKE 246

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           G+QWEG +L DFKTPVWRVSWS+TGN+LAV+DGNNNVT+WKE VDG+W+QVT VEP
Sbjct: 247 GEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVVEP 302

[Close]

BLAST of CmoCh17G007450 vs. Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.7e-31
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 74  LKVWKPY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVV-W 133
           +K+WK   +G WK +    L+ H+DWVRDVAWAP++GLP STIAS SQDG+V +WT    
Sbjct: 191 IKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDA 250

Query: 134 EGDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTV 187
            G+ W  K+L+ F   VW VSWS+T NILAV+ G+N VTLWKE VDG W  ++ V
Sbjct: 251 SGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of CmoCh17G007450 vs. Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 74  LKVWKPY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVV-W 133
           +K+W+   +G WK +    L+ H+DWVRDVAWAP++GLP STIAS SQDG+V IWT    
Sbjct: 191 IKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 250

Query: 134 EGDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTV 187
            G+ W  K+L+ F   VW VSWS+T NILAV+ G+N VTLWKE VDG W  ++ V
Sbjct: 251 SGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of CmoCh17G007450 vs. Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=1 SV=3)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 1


Query: 74  LKVWKPY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVV-W 133
           +K+W+   +G WK +    L+ H+DWVRDVAWAP++GLP STIAS SQDG+V IWT    
Sbjct: 191 IKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 250

Query: 134 EGDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTV 187
            G+ W  K+L+ F   VW VSWS+T NILAV+ G+N VTLWKE VDG W  ++ V
Sbjct: 251 SGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of CmoCh17G007450 vs. TrEMBL
Match: A0A0A0KCU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452950 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 8.2e-61
Identity = 107/116 (92.24%), Postives = 112/116 (96.55%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVARE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGKIL+DFKT VWRVSWS+TGNILAVADGNN+VTLWKE VDGDWQQVTTVEP
Sbjct: 246 GDQWEGKILSDFKTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. TrEMBL
Match: I1N0K6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G092300 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-59
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGK+LNDFKTPVWRVSWS+TGNILAVADGNNNVTLWKE VDG+WQQVTTVEP
Sbjct: 246 GDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. TrEMBL
Match: A0A0B2PTQ0_GLYSO (Protein SEC13 like OS=Glycine soja GN=glysoja_035332 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.2e-59
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGK+LNDFKTPVWRVSWS+TGNILAVADGNNNVTLWKE VDG+WQQVTTVEP
Sbjct: 246 GDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. TrEMBL
Match: A0A0B2PT40_GLYSO (Protein SEC13 like OS=Glycine soja GN=glysoja_035348 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-59
Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  +
Sbjct: 186 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKD 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGK+LNDFKTPVWRVSWS+TGNILAVADGNNNVTLWKE VDG+WQQVTTVEP
Sbjct: 246 GDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. TrEMBL
Match: I3ST95_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-59
Identity = 104/116 (89.66%), Postives = 110/116 (94.83%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 140 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKE 199

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEG++LNDFKTPVWR SWS+TGNILAVADGNNNVTLWKE VDGDWQQVTTVEP
Sbjct: 200 GDQWEGRVLNDFKTPVWRASWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 255

[Close]

BLAST of CmoCh17G007450 vs. TAIR10
Match: AT2G30050.1 (AT2G30050.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 218.8 bits (556), Expect = 2.9e-57
Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG WKMDCFPALQ HTDWVRDVAWAPNLGLPKSTIAS SQDG+VIIWTV  E
Sbjct: 187 TVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTVGKE 246

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           G+QWEGK+L DF TPVWRVSWS+TGN+LAV+DGNNNVT+WKE VDG+W+QVT VEP
Sbjct: 247 GEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAVEP 302

[Close]

BLAST of CmoCh17G007450 vs. TAIR10
Match: AT3G01340.1 (AT3G01340.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-56
Identity = 92/116 (79.31%), Postives = 104/116 (89.66%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG WKMDCFPAL  HTDWVRDVAWAPNLGLPKSTIAS S+DG+VIIWT+  E
Sbjct: 187 TVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKE 246

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           G+QWEG +L DFKTPVWRVSWS+TGN+LAV+DGNNNVT+WKE VDG+W+QVT VEP
Sbjct: 247 GEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVVEP 302

[Close]

BLAST of CmoCh17G007450 vs. NCBI nr
Match: gi|659124967|ref|XP_008462440.1| (PREDICTED: protein SEC13 homolog [Cucumis melo])

HSP 1 Score: 243.4 bits (620), Expect = 3.1e-61
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVARE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGKILNDFKT VWRVSWS+TGNILAVADGNN+VTLWKE VDGDWQQVTTVEP
Sbjct: 246 GDQWEGKILNDFKTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. NCBI nr
Match: gi|449447805|ref|XP_004141658.1| (PREDICTED: protein transport protein SEC13 homolog B-like [Cucumis sativus])

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-60
Identity = 107/116 (92.24%), Postives = 112/116 (96.55%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVARE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGKIL+DFKT VWRVSWS+TGNILAVADGNN+VTLWKE VDGDWQQVTTVEP
Sbjct: 246 GDQWEGKILSDFKTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. NCBI nr
Match: gi|356567320|ref|XP_003551869.1| (PREDICTED: protein transport protein SEC13 homolog B [Glycine max])

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGK+LNDFKTPVWRVSWS+TGNILAVADGNNNVTLWKE VDG+WQQVTTVEP
Sbjct: 246 GDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. NCBI nr
Match: gi|734350980|gb|KHN12541.1| (Protein SEC13 like [Glycine soja])

HSP 1 Score: 236.5 bits (602), Expect = 3.8e-59
Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  +
Sbjct: 186 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKD 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEGK+LNDFKTPVWRVSWS+TGNILAVADGNNNVTLWKE VDG+WQQVTTVEP
Sbjct: 246 GDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVEP 301

[Close]

BLAST of CmoCh17G007450 vs. NCBI nr
Match: gi|300392456|dbj|BAJ10728.1| (SEC13 family protein [Lotus japonicus])

HSP 1 Score: 236.5 bits (602), Expect = 3.8e-59
Identity = 104/116 (89.66%), Postives = 110/116 (94.83%), Query Frame = 1


Query: 73  TLKVWKPYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVVWE 132
           T+KVWK  NG+WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTV  E
Sbjct: 186 TVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAKE 245

Query: 133 GDQWEGKILNDFKTPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 189
           GDQWEG++LNDFKTPVWR SWS+TGNILAVADGNNNVTLWKE VDGDWQQVTTVEP
Sbjct: 246 GDQWEGRVLNDFKTPVWRASWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 301

The following BLAST results are available for this feature:

BLAST of CmoCh17G007450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SC13B_ARATH	5.1e-56	81.90	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana GN=SEC13B PE=1...	[more]
SC13A_ARATH	4.3e-55	79.31	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana GN=SEC13A PE=1...	[more]
SEC13_BOVIN	9.7e-31	54.78	Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1	[more]
SEC13_RAT	1.3e-30	54.78	Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1	[more]
SEC13_MOUSE	1.3e-30	54.78	Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=1 SV=3	[more]

BLAST of CmoCh17G007450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU3_CUCSA	8.2e-61	92.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452950 PE=4 SV=1	[more]
I1N0K6_SOYBN	1.2e-59	90.52	Uncharacterized protein OS=Glycine max GN=GLYMA_18G092300 PE=4 SV=1	[more]
A0A0B2PTQ0_GLYSO	1.2e-59	90.52	Protein SEC13 like OS=Glycine soja GN=glysoja_035332 PE=4 SV=1	[more]
A0A0B2PT40_GLYSO	2.6e-59	89.66	Protein SEC13 like OS=Glycine soja GN=glysoja_035348 PE=4 SV=1	[more]
I3ST95_LOTJA	2.6e-59	89.66	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CmoCh17G007450 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30050.1	2.9e-57	81.90	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	2.4e-56	79.31	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of CmoCh17G007450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124967\|ref\|XP_008462440.1\|	3.1e-61	93.10	PREDICTED: protein SEC13 homolog [Cucumis melo]	[more]
gi\|449447805\|ref\|XP_004141658.1\|	1.2e-60	92.24	PREDICTED: protein transport protein SEC13 homolog B-like [Cucumis sativus]	[more]
gi\|356567320\|ref\|XP_003551869.1\|	1.7e-59	90.52	PREDICTED: protein transport protein SEC13 homolog B [Glycine max]	[more]
gi\|734350980\|gb\|KHN12541.1\|	3.8e-59	89.66	Protein SEC13 like [Glycine soja]	[more]
gi\|300392456\|dbj\|BAJ10728.1\|	3.8e-59	89.66	SEC13 family protein [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G007450.1	CmoCh17G007450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 134..173 score: 0.13coord: 85..128 score: 2.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 92..129 score: 10
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 74..185 score: 5.6
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 92..182 score: 1
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 74..186 score: 8.49
None	No IPR available	PANTHER	PTHR11024	PROTEIN TRANSPORT PROTEIN SEC13-RELATED	coord: 73..187 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G007450	Cucsa.361140	Cucumber (Gy14) v1	cgycmoB0985
CmoCh17G007450	CmaCh14G012960	Cucurbita maxima (Rimu)	cmacmoB249
CmoCh17G007450	CmaCh17G007770	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G007450	CmaCh08G007280	Cucurbita maxima (Rimu)	cmacmoB897
CmoCh17G007450	Cla000892	Watermelon (97103) v1	cmowmB321
CmoCh17G007450	Csa7G452950	Cucumber (Chinese Long) v2	cmocuB373
CmoCh17G007450	MELO3C024447	Melon (DHL92) v3.5.1	cmomeB312
CmoCh17G007450	MELO3C012991	Melon (DHL92) v3.5.1	cmomeB325
CmoCh17G007450	ClCG09G000090	Watermelon (Charleston Gray)	cmowcgB301
CmoCh17G007450	CSPI07G23390	Wild cucumber (PI 183967)	cmocpiB376
CmoCh17G007450	CSPI03G23990	Wild cucumber (PI 183967)	cmocpiB355

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G007450	Cucurbita moschata (Rifu)	cmocmoB060
CmoCh17G007450	Cucurbita moschata (Rifu)	cmocmoB098
CmoCh17G007450	Cucurbita moschata (Rifu)	cmocmoB195
CmoCh17G007450	Cucurbita moschata (Rifu)	cmocmoB299
CmoCh17G007450	Cucurbita moschata (Rifu)	cmocmoB320
CmoCh17G007450	Cucurbita maxima (Rimu)	cmacmoB086
CmoCh17G007450	Cucurbita maxima (Rimu)	cmacmoB134
CmoCh17G007450	Cucurbita maxima (Rimu)	cmacmoB466
CmoCh17G007450	Cucumber (Chinese Long) v2	cmocuB350
CmoCh17G007450	Watermelon (Charleston Gray)	cmowcgB329
CmoCh17G007450	Watermelon (97103) v1	cmowmB335
CmoCh17G007450	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G007450	Cucurbita pepo (Zucchini)	cmocpeB339
CmoCh17G007450	Cucurbita pepo (Zucchini)	cmocpeB361
CmoCh17G007450	Cucurbita pepo (Zucchini)	cmocpeB362
CmoCh17G007450	Bottle gourd (USVL1VR-Ls)	cmolsiB333
CmoCh17G007450	Bottle gourd (USVL1VR-Ls)	cmolsiB349
CmoCh17G007450	Cucumber (Gy14) v2	cgybcmoB318
CmoCh17G007450	Cucumber (Gy14) v2	cgybcmoB902
CmoCh17G007450	Melon (DHL92) v3.6.1	cmomedB358
CmoCh17G007450	Melon (DHL92) v3.6.1	cmomedB373
CmoCh17G007450	Silver-seed gourd	carcmoB0164
CmoCh17G007450	Silver-seed gourd	carcmoB0284
CmoCh17G007450	Silver-seed gourd	carcmoB1015
CmoCh17G007450	Silver-seed gourd	carcmoB1376
CmoCh17G007450	Cucumber (Chinese Long) v3	cmocucB0422
CmoCh17G007450	Cucumber (Chinese Long) v3	cmocucB0449
CmoCh17G007450	Watermelon (97103) v2	cmowmbB365
CmoCh17G007450	Watermelon (97103) v2	cmowmbB372
CmoCh17G007450	Wax gourd	cmowgoB0473
CmoCh17G007450	Wax gourd	cmowgoB0487
CmoCh17G007450	Wax gourd	cmowgoB0494