CmoCh17G006350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G006350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF581 family protein
Location	Cmo_Chr17 : 6637589 .. 6638380 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCGTATCCAATTCCCTCACACTCTCATCATCTCCCCTTCCCAAATTCAACACCCCCTTCACGATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTCTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGGTACTCAATTTTTGCTAAATTCATTAGCTGTTCATCATGGGTTATGAAATAGATCGGGAGTTCTTGTGTTTGGTGATCAAATCATGGAATTTGGTCATGAATTTTGCCGTTTTGTTGTTCGGTTTGTTTGATGATGTTTGGTCGTGTGAAACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATGGCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTTTTTTGTTTAAGTTCTTGTCCATGGGTTTCTTTGTGTGTGTGTGTGTGGTAATGATGTAAGGCTGAAATGAAACATGTTAGAG

mRNA sequence

TGTCGTATCCAATTCCCTCACACTCTCATCATCTCCCCTTCCCAAATTCAACACCCCCTTCACGATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTCTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGATCGGGAGTTCTTGTGTTTGGTGATCAAATCATGGAATTTGGTCATGAATTTTGCCGTTTTGTTGTTCGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATGGCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTTTTTTGTTTAAGTTCTTGTCCATGGGTTTCTTTGTGTGTGTGTGTGTGGTAATGATGTAAGGCTGAAATGAAACATGTTAGAG

Coding sequence (CDS)

ATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTCTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGATCGGGAGTTCTTGTGTTTGGTGATCAAATCATGGAATTTGGTCATGAATTTTGCCGTTTTGTTGTTCGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAG

Homology

[Close]

BLAST of CmoCh17G006350 vs. TrEMBL
Match: A0A0A0K9B4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448060 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.2e-42
Identity = 103/154 (66.88%), Postives = 116/154 (75.32%), Query Frame = 1


Query: 9   LKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-PSFLKSCLLCNKNLDPHEDIYMY 68
           LK +GLGILVHRSPEPNLVVKQSRKL  SL SSSNN PSFLK+C LCNKNLDP EDIYMY
Sbjct: 23  LKGIGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDPQEDIYMY 82

Query: 69  RSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQ 128
           R                       GDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYR+
Sbjct: 83  R-----------------------GDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRK 142

Query: 129 CQRNEG-SETRRLLEDLRRPHHRLPYLR-RPVVS 160
           C +NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Sbjct: 143 CLKNEPRTETRLLLEDLRQ-HNRLPHSRIRPVVS 152

[Close]

BLAST of CmoCh17G006350 vs. TrEMBL
Match: K7KZN1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G044900 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.2e-16
Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 47  FLKSCLLCNKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQI 106
           FLK+C LCNK L P +DIYMYR                        DQG+CSV+CRN+QI
Sbjct: 74  FLKTCNLCNKQLSPDKDIYMYR------------------------DQGFCSVECRNRQI 133

Query: 107 EMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLR 145
            +DE +ELE+ST++MV AYRQC     SETR +LEDLR
Sbjct: 134 VLDEMRELESSTKQMVAAYRQCSSEARSETRLILEDLR 147

[Close]

BLAST of CmoCh17G006350 vs. TrEMBL
Match: G7L953_MEDTR (DUF581 family protein OS=Medicago truncatula GN=MTR_8g022950 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.9e-16
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1


Query: 12  VGLGIL---VHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCLLCNKNLDPHEDIYMYR 71
           VGL +L   +      N++VK + K   S  +   +  FLK+C LCNK L   +DIYMYR
Sbjct: 3   VGLSLLLQIISSKSNSNILVKSAVKK--SNQTIPMDFCFLKTCNLCNKQLSQDKDIYMYR 62

Query: 72  SGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQC 131
                                  GDQG+CS++CRN+QI +DE KELE ST+KMV+ YRQC
Sbjct: 63  -----------------------GDQGFCSIECRNRQIVLDEMKELEISTKKMVQCYRQC 113

Query: 132 QRNEGSETRRLLEDLR 145
                 ETR +LED+R
Sbjct: 123 SNEARRETRLILEDIR 113

[Close]

BLAST of CmoCh17G006350 vs. TrEMBL
Match: K7KPA0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15
Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 47  FLKSCLLCNKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQI 106
           FLK+C LCNK L P++DIYMYR                        DQG+CSV+C N+QI
Sbjct: 74  FLKTCNLCNKQLTPNKDIYMYR------------------------DQGFCSVECWNRQI 133

Query: 107 EMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLR 145
            +DE +ELE+ST+KMV AYRQC     SETR +LEDLR
Sbjct: 134 VLDEMRELESSTKKMVAAYRQCSSEARSETRLILEDLR 147

[Close]

BLAST of CmoCh17G006350 vs. TrEMBL
Match: C6TM57_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G013000 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-15
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1


Query: 47  FLKSCLLCNKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQI 106
           FLK+C LCNK L P +DIYMYR                       GDQG+CSV+CRN+QI
Sbjct: 74  FLKTCNLCNKQLSPDKDIYMYR-----------------------GDQGFCSVECRNRQI 133

Query: 107 EMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLR 145
            +D+ +ELE ST+K+V AYRQC      ETR +LEDLR
Sbjct: 134 VLDDMRELENSTKKIVAAYRQCSSEAHRETRLILEDLR 148

[Close]

BLAST of CmoCh17G006350 vs. TAIR10
Match: AT1G53885.1 (AT1G53885.1 Protein of unknown function (DUF581))

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1


Query: 11  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCLLCNKNLDPHED 70
           +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D
Sbjct: 5   SVGLQLVTRDSREKLNNIVIKSSLRL------NRSNPNISELCFLKTCHLCNKQLHQDKD 64

Query: 71  IYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE 130
           +YMYR                       GD G+CS +CR  Q+ +D++KELEAST+ M+ 
Sbjct: 65  VYMYR-----------------------GDLGFCSRECRESQMLIDDRKELEASTKMMLA 118

Query: 131 AYRQCQRNEG-SETRRLLEDLRR 146
           +YR+C    G SE+R L +DLRR
Sbjct: 125 SYRRCNNGAGKSESRNLFDDLRR 118

[Close]

BLAST of CmoCh17G006350 vs. TAIR10
Match: AT1G53903.1 (AT1G53903.1 Protein of unknown function (DUF581))

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 1


Query: 11  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCLLCNKNLDPHED 70
           +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D
Sbjct: 5   SVGLQLVTRDSREKLNNIVIKSSLRL------NRSNPNISELCFLKTCHLCNKQLHQDKD 64

Query: 71  IYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE 130
           +YMYR                       GD G+CS +CR  Q+ +D++KELEAST+ M+ 
Sbjct: 65  VYMYR-----------------------GDLGFCSRECRESQMLIDDRKELEASTKMMLA 118

Query: 131 AYRQCQRNEG-SETRRLLEDLRR 146
           +YR+C    G SE+R L +DLRR
Sbjct: 125 SYRRCNNGAGKSESRNLFDDLRR 118

[Close]

BLAST of CmoCh17G006350 vs. TAIR10
Match: AT5G65040.1 (AT5G65040.1 Protein of unknown function (DUF581))

HSP 1 Score: 54.3 bits (129), Expect = 8.0e-08
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 1


Query: 41  SSNNPSFLKSCLLCNKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVK 100
           +SN   FLK+C LCN++L  H DIYMYR                       G+  +CS++
Sbjct: 51  ASNYDDFLKTCSLCNRSLCHHRDIYMYR-----------------------GNNAFCSLE 99

Query: 101 CRNQQIEMDEKK 113
           CR +QI++DEKK
Sbjct: 111 CREKQIKLDEKK 99

[Close]

BLAST of CmoCh17G006350 vs. TAIR10
Match: AT4G17670.1 (AT4G17670.1 Protein of unknown function (DUF581))

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 32/92 (34.78%), Postives = 43/92 (46.74%), Query Frame = 1


Query: 45  PSFLKSCLLCNKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQ 104
           P FL SC LC K L  + DI+MYR                       GD  +CS +CR +
Sbjct: 74  PHFLDSCFLCKKRLGDNRDIFMYR-----------------------GDTPFCSEECREE 133

Query: 105 QIEMDEKKELEASTRKMVEAYRQCQRNEGSET 137
           QIE DE KE + S    V+A R+ ++   S +
Sbjct: 134 QIERDEAKEKKQSLSTSVKAMRRNEKRSSSSS 142

[Close]

BLAST of CmoCh17G006350 vs. TAIR10
Match: AT5G49120.1 (AT5G49120.1 Protein of unknown function (DUF581))

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-07
Identity = 34/120 (28.33%), Postives = 57/120 (47.50%), Query Frame = 1


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCLLC 61
           N+ N  N   +  G+L+     P +V K +  +  ++T+ + N         FL+ C LC
Sbjct: 20  NNNNNNNKNPLSEGVLI----SPKVVNKANIIVTTAVTTDTTNLRRCYQDSGFLEHCFLC 79

Query: 62  NKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKEL 115
            + L P +DIYMY+                       GD+ +CSV+CR++Q+ MDE++ L
Sbjct: 80  RRKLLPAKDIYMYK-----------------------GDRAFCSVECRSKQMIMDEEESL 112

[Close]

BLAST of CmoCh17G006350 vs. NCBI nr
Match: gi|659124592|ref|XP_008462244.1| (PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 106/161 (65.84%), Postives = 119/161 (73.91%), Query Frame = 1


Query: 2   NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-PSFLKSCLLCNKNLDP 61
           N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSSNN PSFLK+C LCNKNLDP
Sbjct: 15  NDNSSSYLKGVGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDP 74

Query: 62  HEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRK 121
            EDIYMYR                       GDQGYCS+KCRNQQI++D+K+ELEASTRK
Sbjct: 75  QEDIYMYR-----------------------GDQGYCSIKCRNQQIDIDDKRELEASTRK 134

Query: 122 MVEAYRQCQRNEG-SETRRLLEDLRRPHHRLPYLR-RPVVS 160
           MV AYRQC +NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Sbjct: 135 MVAAYRQCLKNEPRTETRLLLEDLRQ-HNRLPHSRIRPVVS 151

[Close]

BLAST of CmoCh17G006350 vs. NCBI nr
Match: gi|449447950|ref|XP_004141729.1| (PREDICTED: uncharacterized protein LOC101210921 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-41
Identity = 103/154 (66.88%), Postives = 116/154 (75.32%), Query Frame = 1


Query: 9   LKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-PSFLKSCLLCNKNLDPHEDIYMY 68
           LK +GLGILVHRSPEPNLVVKQSRKL  SL SSSNN PSFLK+C LCNKNLDP EDIYMY
Sbjct: 23  LKGIGLGILVHRSPEPNLVVKQSRKLSPSLVSSSNNNPSFLKTCSLCNKNLDPQEDIYMY 82

Query: 69  RSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQ 128
           R                       GDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYR+
Sbjct: 83  R-----------------------GDQGYCSIKCRNQQIDIDDKRELEASTRKMVAAYRK 142

Query: 129 CQRNEG-SETRRLLEDLRRPHHRLPYLR-RPVVS 160
           C +NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Sbjct: 143 CLKNEPRTETRLLLEDLRQ-HNRLPHSRIRPVVS 152

[Close]

BLAST of CmoCh17G006350 vs. NCBI nr
Match: gi|502156612|ref|XP_004510561.1| (PREDICTED: uncharacterized protein LOC101513746 [Cicer arietinum])

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17
Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = 1


Query: 7   TNLKAVGLGIL---VHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCLLCNKNLDPHED 66
           TN+K VGL +L    +     N+++K S K    +        FLK+C LCNK L PH+D
Sbjct: 29  TNMK-VGLKLLPQITNSKSNSNVLIKSSLKKSNQIIPMDF--CFLKTCNLCNKKLSPHKD 88

Query: 67  IYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE 126
           IYMYR                       GDQG+CS++CRN+QI +DE KELE+ST+KMV+
Sbjct: 89  IYMYR-----------------------GDQGFCSIECRNRQIFLDEMKELESSTKKMVQ 143

Query: 127 AYRQCQRNEGSETRRLLEDLR 145
           +YRQC      ET  +LEDLR
Sbjct: 149 SYRQCCNEARRETHHILEDLR 143

[Close]

BLAST of CmoCh17G006350 vs. NCBI nr
Match: gi|947099210|gb|KRH47702.1| (hypothetical protein GLYMA_07G044900 [Glycine max])

HSP 1 Score: 92.4 bits (228), Expect = 7.5e-16
Identity = 50/98 (51.02%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 47  FLKSCLLCNKNLDPHEDIYMYRSGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQI 106
           FLK+C LCNK L P +DIYMYR                        DQG+CSV+CRN+QI
Sbjct: 74  FLKTCNLCNKQLSPDKDIYMYR------------------------DQGFCSVECRNRQI 133

Query: 107 EMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLR 145
            +DE +ELE+ST++MV AYRQC     SETR +LEDLR
Sbjct: 134 VLDEMRELESSTKQMVAAYRQCSSEARSETRLILEDLR 147

[Close]

BLAST of CmoCh17G006350 vs. NCBI nr
Match: gi|357514285|ref|XP_003627431.1| (DUF581 family protein [Medicago truncatula])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1


Query: 12  VGLGIL---VHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCLLCNKNLDPHEDIYMYR 71
           VGL +L   +      N++VK + K   S  +   +  FLK+C LCNK L   +DIYMYR
Sbjct: 3   VGLSLLLQIISSKSNSNILVKSAVKK--SNQTIPMDFCFLKTCNLCNKQLSQDKDIYMYR 62

Query: 72  SGVLVFGDQIMEFGHEFCRFVVRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQC 131
                                  GDQG+CS++CRN+QI +DE KELE ST+KMV+ YRQC
Sbjct: 63  -----------------------GDQGFCSIECRNRQIVLDEMKELEISTKKMVQCYRQC 113

Query: 132 QRNEGSETRRLLEDLR 145
                 ETR +LED+R
Sbjct: 123 SNEARRETRLILEDIR 113

The following BLAST results are available for this feature:

BLAST of CmoCh17G006350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh17G006350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9B4_CUCSA	7.2e-42	66.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G448060 PE=4 SV=1	[more]
K7KZN1_SOYBN	5.2e-16	51.02	Uncharacterized protein OS=Glycine max GN=GLYMA_07G044900 PE=4 SV=1	[more]
G7L953_MEDTR	8.9e-16	41.91	DUF581 family protein OS=Medicago truncatula GN=MTR_8g022950 PE=4 SV=1	[more]
K7KPA0_SOYBN	1.2e-15	51.02	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
C6TM57_SOYBN	1.2e-15	50.00	Uncharacterized protein OS=Glycine max GN=GLYMA_16G013000 PE=2 SV=1	[more]

BLAST of CmoCh17G006350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53885.1	1.6e-16	38.46	Protein of unknown function (DUF581)	[more]
AT1G53903.1	1.6e-16	38.46	Protein of unknown function (DUF581)	[more]
AT5G65040.1	8.0e-08	38.89	Protein of unknown function (DUF581)	[more]
AT4G17670.1	1.4e-07	34.78	Protein of unknown function (DUF581)	[more]
AT5G49120.1	5.2e-07	28.33	Protein of unknown function (DUF581)	[more]

BLAST of CmoCh17G006350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124592\|ref\|XP_008462244.1\|	1.2e-42	65.84	PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo]	[more]
gi\|449447950\|ref\|XP_004141729.1\|	1.0e-41	66.88	PREDICTED: uncharacterized protein LOC101210921 [Cucumis sativus]	[more]
gi\|502156612\|ref\|XP_004510561.1\|	1.0e-17	43.26	PREDICTED: uncharacterized protein LOC101513746 [Cicer arietinum]	[more]
gi\|947099210\|gb\|KRH47702.1\|	7.5e-16	51.02	hypothetical protein GLYMA_07G044900 [Glycine max]	[more]
gi\|357514285\|ref\|XP_003627431.1\|	1.3e-15	41.91	DUF581 family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016165	linoleate 13S-lipoxygenase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G006350.1	CmoCh17G006350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 41..68 score: 1.7E-9coord: 88..112 score: 6.
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 91..157 score: 6.3E-31coord: 20..67 score: 6.3
None	No IPR available	PANTHER	PTHR33059:SF24	SUBFAMILY NOT NAMED	coord: 20..67 score: 6.3E-31coord: 91..157 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G006350	Cucsa.359840	Cucumber (Gy14) v1	cgycmoB0985
CmoCh17G006350	CmaCh08G008290	Cucurbita maxima (Rimu)	cmacmoB897
CmoCh17G006350	CmaCh17G006540	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G006350	Cla015512	Watermelon (97103) v1	cmowmB324
CmoCh17G006350	Csa7G448060	Cucumber (Chinese Long) v2	cmocuB373
CmoCh17G006350	MELO3C024312	Melon (DHL92) v3.5.1	cmomeB312
CmoCh17G006350	ClCG09G001330	Watermelon (Charleston Gray)	cmowcgB301
CmoCh17G006350	CSPI07G22110	Wild cucumber (PI 183967)	cmocpiB376
CmoCh17G006350	Lsi02G028600	Bottle gourd (USVL1VR-Ls)	cmolsiB333
CmoCh17G006350	Cp4.1LG12g09440	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G006350	Cp4.1LG17g04360	Cucurbita pepo (Zucchini)	cmocpeB339
CmoCh17G006350	MELO3C024312.2	Melon (DHL92) v3.6.1	cmomedB358
CmoCh17G006350	CsaV3_7G034000	Cucumber (Chinese Long) v3	cmocucB0449
CmoCh17G006350	Cla97C09G163410	Watermelon (97103) v2	cmowmbB372
CmoCh17G006350	Carg13903	Silver-seed gourd	carcmoB0818
CmoCh17G006350	Carg18950	Silver-seed gourd	carcmoB1037

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G006350	CmoCh08G007990	Cucurbita moschata (Rifu)	cmocmoB320

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G006350	Cucumber (Gy14) v1	cgycmoB0411
CmoCh17G006350	Cucurbita maxima (Rimu)	cmacmoB253
CmoCh17G006350	Wild cucumber (PI 183967)	cmocpiB357
CmoCh17G006350	Cucumber (Chinese Long) v2	cmocuB352
CmoCh17G006350	Melon (DHL92) v3.5.1	cmomeB327
CmoCh17G006350	Watermelon (Charleston Gray)	cmowcgB327
CmoCh17G006350	Watermelon (97103) v1	cmowmB338
CmoCh17G006350	Cucurbita pepo (Zucchini)	cmocpeB366
CmoCh17G006350	Bottle gourd (USVL1VR-Ls)	cmolsiB348
CmoCh17G006350	Cucumber (Gy14) v2	cgybcmoB321
CmoCh17G006350	Cucumber (Gy14) v2	cgybcmoB902
CmoCh17G006350	Melon (DHL92) v3.6.1	cmomedB375
CmoCh17G006350	Silver-seed gourd	carcmoB0165
CmoCh17G006350	Cucumber (Chinese Long) v3	cmocucB0425
CmoCh17G006350	Watermelon (97103) v2	cmowmbB363
CmoCh17G006350	Wax gourd	cmowgoB0475
CmoCh17G006350	Wax gourd	cmowgoB0487
CmoCh17G006350	Cucurbita moschata (Rifu)	cmocmoB200