CmoCh17G005740 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAATCAAGGGTGGGCGGAGATCACAGTGCTGTTGTTGCTGGCTTTGGCCGTTGAGCTACTACCCACTCACTCTCCTTTGCTCTTCTCTGTCATCACTCCGTCTCGCCGGAAAATTCTTCCGCCTTCCGTCCATAAACAGCCACCGAAATGCTATTTGCTCGATCGTTTCTCCGCTCCCACCTCAAACCCTCCGACATTCCTCGCCATTCTCCGCCTTTTTCTTCCCTCTTTTCGTCTCTTTCAGCTTCTTCCGCTGCGTCTATTGAAGCCGATAGGCTTCTCAGAGATGGCCCCAGGAATAATTGGACTCGACAGGAGATTCGCGACATTTACGACTCTCCCGTTCTCGATCTGCTTTTCCATGGCGTCAGTACTCTCTCTCTCTCTCTCTCTATATATATGTGTGTGTGTGTGTGTAATGCAAACTTTTTGTTAGTACTGGTGGGAGAAATTGAAGCTATTTGTTTGAGATTTTTCGTTATTTTCTTATGACTTGTTGGAGACATTGAGTTGGCCTGTAGTCTCAGTGTCTAAGAGCTTTGCACGTACGATTTGTGGTTGATAGGTCTTTTAATGGTTGAAGTTTTTCAATCTGTTCTCAAATCTATTATCACTATCGCTAGAATTAAAAAGTGAAACCCTTACCACGATTTCTTACCTCAAATTTATCGTGTCTGTTAAAGAGGAAATCATCCACAACCTTTTTGCTTATAGATGTTGATTCTAATGGGGTTCTCCTTTGAGGCTTCAGTAGTATTGCCCAACATATAGAATTAGGCCCGTGATGCGAATGTAAATTCATTTAAATGTTCGTAAAAAGTAACTTCCCTTTCTTCTCTTGAACTATCATAGTTGCATAAAAAATAACCACTCCTAGTTACTATATCTCTTGAGAGAAATAAAACTTTTGGAGCATAACTCTGAAGCCACCGCACCAATGTTCTAGGCTGGTGCCTCTCTGAAAGTAACTTGTGTTCATTTCATAAATTGGTCTAATGGTCCAAGGGCGTTATACTATACGAAATGGTGGTTGTTGCATTGGTCTTGTTCGTTTTTGTGGCTAAATGCCTATTCATCCCTCTAAAGGCACAATGGATCTTCTAATATATCATGAAAATAAATAATGATCTATATATCTAACCTAATTCCAATTGTATACCTTGTTTTAGTAACCAATTATTTGCGTATGGAAACTTTTTACTAACAAATAATTTGGTGGAAACTGACTTATTACACAAGTAGTGTTACAATTTTTTTGATTTCCATATTGCAACTTGACCTCTTTCTAAATCATCTAGTTCTTAAATGGGTTTTACTTGAAGCACTATTTCCATACTTTTTCCCCTTTTTATTTTGTTTGCTTATTACATATATATACCTATTTATTGTTCTTCAGGCGCAAGTTCATAGGCACACACACAATTTTCGGGAGGTGCAGCAGTGTACCCTCCTTTCAATCAAAACAGGTGGGTGTAGTGAGGATTGTTCCTACTGTCCTCAATCATCGAGATATGACACTGGAGTGAAATCCCAAAAACTTATGACCAAGGATGTCGTGCTTGAGGCAGCCAAAAAGGTATCCCTTTTTAATTGTTGCAAATTGTTCTGTACATTGAAGCTGAGTTTCATTGCCGCGACTAACCAATAATAACCTTATGTATGTCTTAGATAAGTTGGAATTGGTACCCTTTGGCAGTCTTGTTATGCCATCTTCCTGATCCTTGGGTTTTTGTTGCCCCCTTACTGATCAAGAGACTTGTGAGGTGTCAGTCTCCTTTCTGTTGTTTTTACCTGGTCGTTTGCCATGGAAGAAAGGATTCTAGCTTTTAGCTTTCGAAGCCCTTTGAGGGTTTCTCTAGCAGATATATATATATATATATATTCCGTTGCAGATTCTTTTTGCCCCTTCTCCCCACCAGGAAGCCAATGTATTTTCCTCTGTTTTGGAAGTTAAAATTCCTAAGAAAGTGATGTTCTTTTCTTTGACAAGTTTTACATGGGAGAGTAAATACTCAGAACCGTCTCCAGAGGTTCTCTTCTCTTCCTTGGTGTTGTAGCCTCAATGACGTGTTCTTTGTAGAAGGCAAGAAGAGGATCTTGACCATTTGCTTTGGGATTTTTATTCTGTTAGTTCTTTGTGGAATCCGTTCCTTATGACTTTCAAGATTCTGTTAGCTCATAATAGAGAATATCCATAAATTGTATGTTTGGTATTTATGGTTACTCGGCATTAAATATATTTTATTGAACAAGGCTTTTATTCTAAAAATATTTAGGGCATCTAATGTGCACTGCACATGAACCTTCAATCTTCGTATGCTAAATCATGACATGCTTATTGGTAGACTTTTTGTAACTTAGTACTGGTGTCTTTCATATTTTTCATTCTACCATTGATGTCGTTTTATATATATATAACAGAGCTATACCTTAACTGTTCCTCTTTTGTTTTCATGCCATGCCATCTTCTTTCTTTAAAAAGAAGTTGAAAAATCTTAAAAAGGAATAATTTTTTATTGCATATTATCTGTCCCTTGACCAATATTTAAAGCGTTTATTCACATTGTCTGGCAGGCAAAAGAGGCTGGTAGCACAAGATTTTGTATGGGTGCTGCATGGAGAGATACAATAGGAAGAAAAACTAATTTCAATCAGATCCTTGATTATGTAAAAAAAATAAGGTAACAAATTTCACCTTAAATAAGAAATAGCTACAAAGATTAGAAGACTGAAATAATTAGCTTGCTTACAGAATACAGATTAAAGATAGATCAACAATAAAATGAGAATAAGTTCTTAACTTTTCCTGCCCCTGTCTGCTTAGAATGGTCAGGACAAGAAAGTTTTTCATCATAGAGTGAGTGATGGTCAGAGCAGAGCACTTAGAAAGATTTTGCAATGATTTAAAAAACAAATTCAGCATGATTTGAAAGTCCCTAGTGTTACACATGATTTTTGCCTCTTTTATTTTCTTTAAATACTAGGAAAGAAAATGCTAGGATTCCTTTACTAAATTCAATCTCTTAAGCAAAGCCTTTGTCTTTTCTCCTTTTGCTTAATCTCTCTTTCAAGGCTTGCAGTTCGGTTTTCCGCATCTTTTGATAATTTATGTATATATGTAAAAGATTTCTGCAAGTGTTGAGATTAGCAAGGGTTGACTCTTTAGTATTGTCCAATCAAGCTAGTGAAATGCATGATCGAGAAACTGAAACATTGGCAAGAATCGTCCACAATTATATCTCTTTTAACCTGAGTAATCACTCGTCCTTCGACATTAATTCTCAAATCAAATTCATCTGTGATGTATTAGAGAGATGGGGATGGAGGTCTGCTGCACTCTGGGCATGATAGAGAAGCAACAAGCTATTGACCTCAAGAAGGCCGGCCTCACAGCTTATAACCACAACCTCGACACATCAAGGGAATACTACCCAAATATTATTACCACGAGGAGTTATGATGAGCGTTTAAAAACTCTAGAATTTGTTCGTGATGCTGGAATCAATGTCTGCTCTGGTAATTTTTACATCTTTGATTTTAACTCAGATTTTCCGTGTTGTCCGTCTTCTCTTCAACATTTATACTACTACTTCATGACGTATTGACAAATTTAATGAATATTCCTAGATTTATAACTTATTTATCGGAAAAAGTTTATTAATTTATAACTTCTAGAAGAAATGGCTTATAAAAGAGCGGGAAACCCCCACAAACCATAAGACTACAAAAGGGCTGCCCAGTTGGCATTTGGAAACTATTTAGGATTCATAACACATATAAGGGAAAATATTCAGCTTGGTCAGTAAGCCTAGAAGTCTACTAAAAGTTATAATTGTGACAATTTGAAGAGGATAATATTTATTGAAGGGAGACATAGCTATAGCCTTACGATGGTTTAAGGTTTCATCCATTAGTAGACCAACTATCCCAATGGTTATAAATGGTGGAGGGATCCGAGGACGTTAAGTTTCTGAAGATCTCCACGGCTTCTAGGTTCTTGATTTGGAGTATTCACTTCCCTGATGATGTAGGGAAAGGAATGTTAATGAAGGGAGACGTGTATTCCTTTGTTTGCTTTTGAAACAATTAATTTATATTGATCAGTATTGGCGTTCTATGATTTTTTTTCTAGTTCTCTAATGGGGCCATATAAACATTCCAGAGACTTTTTCCTTTTTCCTTGGCCGCTATATGGTGGTGTACACTTTCTTTTGTATGATAGAAAAATATTCTATTGATGTGATGAAATATACCAAGAAAATTTCCGGGAGCCTGAGAAATTTTGCAACTCCATCCTCTTCCTCCCCTTTTGTACTATATTTTTATGGCATTGGTACTTTCACTGCTTAATAAGAACTTGGTGAAATCCTTAATTTCTGGCAATAGGAGGAATAATTGGGCTTGGAGAGGCAGAAGAGGACCGTGTCGGTTTGCTGCATACCTTGGCGACTCTGCCCACACACCCCGAGAGTGTTCCCATCAATGCGCTGGTTGCAGTGAAAGGAACCCCTCTTCAAGACCAAAAAGTAGCTCATATTTGTTGCACAAACCTTATTTAGACACCACTACTTCACTTCATATGAAAGCTATTGCTTTGGTCTCTATAGTGAATGCTTTTCTTGCCTTTCTTTCTTTTCAGCCTGTTGAAATATGGGAGATGATTCGAATGATCGCCACAGCACGGATCACCATGCCAAAAGCAATGGTAAGGCTGTCTGCAGGTCGAGTGAAGTTTTCCGTGCCGGAGCAGGCGTTATGCTTCCTTGCAGGAGCAAATTCTATCTTCACCGGGGAGAAACTGCTAACGACGCCAAATAACGACTTTGATGCTGATCAACACATGTTCAAGATGCTGGGTTTGATTCCAAAAGCTCCCAGTTTCACTGATGGTGCTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAATTAATTCATAAGCCACTGGCTCTCCAATCAATTCTCTCTCTCTCAATCTTTATTTCTTTGCTTTTTTCTCCATTTTGGGTTTGTTAATCCGTAGATTTGCAGTTGGTATCTCCATTAGATGTGAGCTTAAAAGAGAAAATGAAGAGGTAATGAACACTTCTCCTTGTGTTAGAGTAGTTACACGTACTTGTTCTACAAGTCATCACTTCATGATTAATGTTTAGGAAATCTTTATCATTCCCATTCCTTTTGTTTGTGATAGGACTGGTTATTAATGTATAATGGTTATAGTTTTATAAAATTATTTGACTATTCTCCCTCTTGGCATAAA AAAAAAAAAAAAAAATCAAGGGTGGGCGGAGATCACAGTGCTGTTGTTGCTGGCTTTGGCCGTTGAGCTACTACCCACTCACTCTCCTTTGCTCTTCTCTGTCATCACTCCGTCTCGCCGGAAAATTCTTCCGCCTTCCGTCCATAAACAGCCACCGAAATGCTATTTGCTCGATCGTTTCTCCGCTCCCACCTCAAACCCTCCGACATTCCTCGCCATTCTCCGCCTTTTTCTTCCCTCTTTTCGTCTCTTTCAGCTTCTTCCGCTGCGTCTATTGAAGCCGATAGGCTTCTCAGAGATGGCCCCAGGAATAATTGGACTCGACAGGAGATTCGCGACATTTACGACTCTCCCGTTCTCGATCTGCTTTTCCATGGCGCGCAAGTTCATAGGCACACACACAATTTTCGGGAGGTGCAGCAGTGTACCCTCCTTTCAATCAAAACAGGTGGGTGTAGTGAGGATTGTTCCTACTGTCCTCAATCATCGAGATATGACACTGGAGTGAAATCCCAAAAACTTATGACCAAGGATGTCGTGCTTGAGGCAGCCAAAAAGGCAAAAGAGGCTGGTAGCACAAGATTTTGTATGGGTGCTGCATGGAGAGATACAATAGGAAGAAAAACTAATTTCAATCAGATCCTTGATTATGTAAAAAAAATAAGAGAGATGGGGATGGAGGTCTGCTGCACTCTGGGCATGATAGAGAAGCAACAAGCTATTGACCTCAAGAAGGCCGGCCTCACAGCTTATAACCACAACCTCGACACATCAAGGGAATACTACCCAAATATTATTACCACGAGGAGTTATGATGAGCGTTTAAAAACTCTAGAATTTGTTCGTGATGCTGGAATCAATGTCTGCTCTGGAGGAATAATTGGGCTTGGAGAGGCAGAAGAGGACCGTGTCGGTTTGCTGCATACCTTGGCGACTCTGCCCACACACCCCGAGAGTGTTCCCATCAATGCGCTGGTTGCAGTGAAAGGAACCCCTCTTCAAGACCAAAAACCTGTTGAAATATGGGAGATGATTCGAATGATCGCCACAGCACGGATCACCATGCCAAAAGCAATGGTAAGGCTGTCTGCAGGTCGAGTGAAGTTTTCCGTGCCGGAGCAGGCGTTATGCTTCCTTGCAGGAGCAAATTCTATCTTCACCGGGGAGAAACTGCTAACGACGCCAAATAACGACTTTGATGCTGATCAACACATGTTCAAGATGCTGGGTTTGATTCCAAAAGCTCCCAGTTTCACTGATGGTGCTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAATTAATTCATAAGCCACTGGCTCTCCAATCAATTCTCTCTCTCTCAATCTTTATTTCTTTGCTTTTTTCTCCATTTTGGGTTTGTTAATCCGTAGATTTGCAGTTGGTATCTCCATTAGATGTGAGCTTAAAAGAGAAAATGAAGAGGTAATGAACACTTCTCCTTGTGTTAGAGTAGTTACACGTACTTGTTCTACAAGTCATCACTTCATGATTAATGTTTAGGAAATCTTTATCATTCCCATTCCTTTTGTTTGTGATAGGACTGGTTATTAATGTATAATGGTTATAGTTTTATAAAATTATTTGACTATTCTCCCTCTTGGCATAAA ATGCTATTTGCTCGATCGTTTCTCCGCTCCCACCTCAAACCCTCCGACATTCCTCGCCATTCTCCGCCTTTTTCTTCCCTCTTTTCGTCTCTTTCAGCTTCTTCCGCTGCGTCTATTGAAGCCGATAGGCTTCTCAGAGATGGCCCCAGGAATAATTGGACTCGACAGGAGATTCGCGACATTTACGACTCTCCCGTTCTCGATCTGCTTTTCCATGGCGCGCAAGTTCATAGGCACACACACAATTTTCGGGAGGTGCAGCAGTGTACCCTCCTTTCAATCAAAACAGGTGGGTGTAGTGAGGATTGTTCCTACTGTCCTCAATCATCGAGATATGACACTGGAGTGAAATCCCAAAAACTTATGACCAAGGATGTCGTGCTTGAGGCAGCCAAAAAGGCAAAAGAGGCTGGTAGCACAAGATTTTGTATGGGTGCTGCATGGAGAGATACAATAGGAAGAAAAACTAATTTCAATCAGATCCTTGATTATGTAAAAAAAATAAGAGAGATGGGGATGGAGGTCTGCTGCACTCTGGGCATGATAGAGAAGCAACAAGCTATTGACCTCAAGAAGGCCGGCCTCACAGCTTATAACCACAACCTCGACACATCAAGGGAATACTACCCAAATATTATTACCACGAGGAGTTATGATGAGCGTTTAAAAACTCTAGAATTTGTTCGTGATGCTGGAATCAATGTCTGCTCTGGAGGAATAATTGGGCTTGGAGAGGCAGAAGAGGACCGTGTCGGTTTGCTGCATACCTTGGCGACTCTGCCCACACACCCCGAGAGTGTTCCCATCAATGCGCTGGTTGCAGTGAAAGGAACCCCTCTTCAAGACCAAAAACCTGTTGAAATATGGGAGATGATTCGAATGATCGCCACAGCACGGATCACCATGCCAAAAGCAATGGTAAGGCTGTCTGCAGGTCGAGTGAAGTTTTCCGTGCCGGAGCAGGCGTTATGCTTCCTTGCAGGAGCAAATTCTATCTTCACCGGGGAGAAACTGCTAACGACGCCAAATAACGACTTTGATGCTGATCAACACATGTTCAAGATGCTGGGTTTGATTCCAAAAGCTCCCAGTTTCACTGATGGTGCTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAATTAA
BLAST of CmoCh17G005740 vs. Swiss-Prot
Match: BIOB_ARATH (Biotin synthase OS=Arabidopsis thaliana GN=BIO2 PE=2 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 7.2e-174 Identity = 304/383 (79.37%), Postives = 341/383 (89.03%), Query Frame = 1
BLAST of CmoCh17G005740 vs. Swiss-Prot
Match: BIOB_CYTH3 (Biotin synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=bioB PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 8.7e-119 Identity = 209/319 (65.52%), Postives = 259/319 (81.19%), Query Frame = 1
BLAST of CmoCh17G005740 vs. Swiss-Prot
Match: BIOB_SCHPO (Biotin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bio2 PE=1 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 6.7e-111 Identity = 194/311 (62.38%), Postives = 242/311 (77.81%), Query Frame = 1
BLAST of CmoCh17G005740 vs. Swiss-Prot
Match: BIOB_FLAJ1 (Biotin synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=bioB PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 2.3e-103 Identity = 181/314 (57.64%), Postives = 234/314 (74.52%), Query Frame = 1
BLAST of CmoCh17G005740 vs. Swiss-Prot
Match: BIOB_FLAPJ (Biotin synthase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=bioB PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 1.5e-102 Identity = 180/314 (57.32%), Postives = 233/314 (74.20%), Query Frame = 1
BLAST of CmoCh17G005740 vs. TrEMBL
Match: A0A0A0KCA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G041720 PE=3 SV=1) HSP 1 Score: 734.9 bits (1896), Expect = 4.8e-209 Identity = 367/382 (96.07%), Postives = 376/382 (98.43%), Query Frame = 1
BLAST of CmoCh17G005740 vs. TrEMBL
Match: M5XDY0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007144mg PE=3 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 3.1e-179 Identity = 314/384 (81.77%), Postives = 348/384 (90.62%), Query Frame = 1
BLAST of CmoCh17G005740 vs. TrEMBL
Match: D7U1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00090 PE=3 SV=1) HSP 1 Score: 633.6 bits (1633), Expect = 1.5e-178 Identity = 311/377 (82.49%), Postives = 346/377 (91.78%), Query Frame = 1
BLAST of CmoCh17G005740 vs. TrEMBL
Match: W9RFB7_9ROSA (Biotin synthase OS=Morus notabilis GN=L484_024696 PE=3 SV=1) HSP 1 Score: 629.8 bits (1623), Expect = 2.2e-177 Identity = 310/383 (80.94%), Postives = 342/383 (89.30%), Query Frame = 1
BLAST of CmoCh17G005740 vs. TrEMBL
Match: A0A059DAZ5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00054 PE=3 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 6.4e-177 Identity = 316/392 (80.61%), Postives = 343/392 (87.50%), Query Frame = 1
BLAST of CmoCh17G005740 vs. TAIR10
Match: AT2G43360.1 (AT2G43360.1 Radical SAM superfamily protein) HSP 1 Score: 611.3 bits (1575), Expect = 4.1e-175 Identity = 304/383 (79.37%), Postives = 341/383 (89.03%), Query Frame = 1
BLAST of CmoCh17G005740 vs. NCBI nr
Match: gi|659089829|ref|XP_008445703.1| (PREDICTED: biotin synthase [Cucumis melo]) HSP 1 Score: 736.9 bits (1901), Expect = 1.8e-209 Identity = 369/383 (96.34%), Postives = 376/383 (98.17%), Query Frame = 1
BLAST of CmoCh17G005740 vs. NCBI nr
Match: gi|449446229|ref|XP_004140874.1| (PREDICTED: biotin synthase [Cucumis sativus]) HSP 1 Score: 734.9 bits (1896), Expect = 6.9e-209 Identity = 367/382 (96.07%), Postives = 376/382 (98.43%), Query Frame = 1
BLAST of CmoCh17G005740 vs. NCBI nr
Match: gi|596170890|ref|XP_007223123.1| (hypothetical protein PRUPE_ppa007144mg [Prunus persica]) HSP 1 Score: 636.0 bits (1639), Expect = 4.4e-179 Identity = 314/384 (81.77%), Postives = 348/384 (90.62%), Query Frame = 1
BLAST of CmoCh17G005740 vs. NCBI nr
Match: gi|225433839|ref|XP_002263125.1| (PREDICTED: biotin synthase [Vitis vinifera]) HSP 1 Score: 633.6 bits (1633), Expect = 2.2e-178 Identity = 311/377 (82.49%), Postives = 346/377 (91.78%), Query Frame = 1
BLAST of CmoCh17G005740 vs. NCBI nr
Match: gi|743883568|ref|XP_011037058.1| (PREDICTED: biotin synthase [Populus euphratica]) HSP 1 Score: 632.1 bits (1629), Expect = 6.3e-178 Identity = 313/384 (81.51%), Postives = 349/384 (90.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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