CmoCh17G005520 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G005520
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP synthase subunit alpha, chloroplastic (3.6.3.14)
LocationCmo_Chr17 : 5619639 .. 5625343 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGAGAGGGAGCCACGCTCCCTGGAGCAAGAGATGAAGACGACGTTGAAGCTGGAGTAGTCGCCACAGAGGGTGAAGGAGCTGATTTTGGCGAGGAGGCCGACGACGACTTGGTTGGCGAAGAGGCCAGTGACCATGCCCCCCGGAGCAAAGGACAATGATAGTGTTGAAGCTGCAAGAATTGCAACAGTGGGCATAGGAGCCTATTTTGGCGAGGAATCGCCCCGAAGCAATTTCTTCTTCCGAATGCCTATCTTCTTCACCTCATCTTGATTTCTTGCGATTACGTTCTACTATGGAGCCCTAAATAACCGTTATCTCTAATCTTTGTTTTGGCACACATGGCTCGAAATGCAGTGGTACATGGTCGATTTTCTTGTTACCTGATAATGGACAATTTAAAGATTGACACAACTAGAATTTTGTTCAAGTAGATACAAATTACTATGTTATATCAATACATATAATTTCATGGATTCATCTAGCAGTAATTTCTATTTCCAGATTAGATTTAGGTTATTCCTAATGAGGAAACCAACATAAGTTTTTAACAACAAAAAGCACATGTACATAAAACAGACTCGGAAAAGGATTCTCGGAAGTCTCTAGTTTAGCTGCCTTGTCACCTCCTTTGTTCTGAACCTCCTCTATTTGAAAATTAAAGCTAAAATAATTTTGACGAGTAATTAATTTAATCGGCAAGTAGCTAACTTGTCATTTACAAGTTTTATAATTTATCTTTCCCGTCATTCTTAAGTTTTATTCACCGTTGATTCCTATTTTGTTTTACTAAGATCATTTGTTCATTAAAACGTATTTCAGCTACTTTTAGCTTAGGTTATTGACTCTCTATATGTACATTTAGAATTTTTAGACTCATATGTAAGACTCGCTATCAGTCAAATACTACTTATCTACTAATTTCTTTGACAGCCTATAACATCATATAATCTAACGGTCAGGAATCCTCATTGTTTCTAACTTAGCACACAGTGCGTCAGTCACGAATTCTACGGGATTAGTAGACTACAATACTCATATATATAGCCCATGGCTCAATAAACTCTACTCACATATATAACATACTCACATCATATGCATGCATTCATATATTTATAATTTTCGAACACAAAATATTCTATACTTCATTTGTAGCATGCTTACATCTTAGGCAGACAATCACAATATACAAACAATTAGTCATATCATGAACACATATAATAGTATTTTAAGCTCTTAATCATGTAATCAGCATACTCGTATATTCAAAACGAATTAAGAACTTGTTTGAGAAGTTTAATATGCTACTTGGTTTCGACTTCCTCTTTTTGTAATGTATACTTAAAAAGGTAACCTAACACAATTCGTCCCAATTGAACCTATATTTAACAATTTCAAGGTAAGTATAGGTCAATCGTGATAGAACAGGTCAAAAGGAGTCGAACGGAACAAACCGAAAGTCAAGATAGTAGCTCACGCGTCAATCTAAGGTTCCCCACGCACCTGGACTACAGTCAATCGCTCTCACCACTCGTAGTCTTCACTCGCGCGTGTGTACTGCAGGTGCCTCGTCTTCTTCTTCCTCACACATTTTCTACAATCATCAACTTTCTGTTAATACCCATTATGTCCCAACACGACAATCTACTCCTACAACCCGAGATTCAAACTAACCCCTTCTACAACTTTGTTGATCTCATTATTGTAATTCTAACAAGCCATACTTCATAACCTAATATAGCTTATCTCTTGGGATTTCGTCCAAGAGTTTCTACAAACGTTCCTCTAACCTCAAGCTTATGCCCCGATATGGCAATCACCAAAAACCATGAGTTCGAAAAACCTTGATTTTACATAACTAAAGGCTAACTCAGAGTATGGATGACTCTAGAATCACTTACATCATAAAAATGCCACATTTCAAACCTTCGAATACAGGTGCAAAATGACAATAATAATACATAGGCAAACAAAATAACATTATTTCATTGGTTTCATCGTTATCTTTGCATATTAAAATATAGTTTTTATATTAAAATAATCATTTTGTCTTACTATTACTTGAGGGGACTGATTTGATTGGGCTCGAAGAATAAAGAAGAGAGGAGAGAGAGAGGAGAAAGAAGAGAGAGAGGAGATTAGGGTTTTGAGGTTGGAGGAGAAGATTCGATTAAAAACCGACACCAGAGATCTGAGAATCCTCAACCTAGACCTTCAGTCGTCCGAGGCAAGGTGCTTCCATGAATCACACCTTCCTATTTCGTCAAAAACGTTTGAGAACTCAAGGTTAATTCGCGAATGTCTAGATTGAGAGGTTTATCGAGATTTTCGTGCTATTGGCGTTTTTTAGTGATTCTTAGACTTTTACCCTCAGGACTGTGATCTTCGCAAGTTTTGGAGGAAAGCGATCGAGCTTTCCGTTCGAATTAGAGTTTCAAGAAAACACGATTTTTGGTAAGAACTCGTATTTTTCACCAAATTCAAACTCGAATATTAAGACCTGTGATTATCAAAAAAAAAAAAAAAAAGAAAATCATATTGAAGAAGTAGAATATGAGATCTACAATGTTCATGAAGAAAACTTGCTAATTTGGATTACGGATTGGAAGTTATAAACATCAGAAGAAAATGGATCGAAAATGCGAAAAACTCACGTTTCAAGAAAATTTGGAAAAATGCAGGAGGAGAGAGGCAAGAACACCGCCACACATCGGCCTGCATACGGAGGAGCGCGGTAGGAACGACGAGTGGCGAGCGTCGACTAGAGAGACGCGTCCCACACACTAGGCGACACGCGTCGAGCGTGTGCAATCAGGTTGGCTTGAGTCTGAACCGGAGCTCCGCACTCGATCGGGCGTACTGAACCAAACCGAACCAGTCGTAGGCCCGCAACTGTGCGGGAAGTCGCGCGTGGACACGCGCGTGTAAGAAGCCCTCCGGGCACGTGTAGCGCGCATGCGTAGTTGTTTTTCCTTCGTTCGACCTCCATTTGCTTGTTTTTCGTCCCAGTTTCTATACTAACCCTATTATTATGTGAATTAGGACCTGTCAAGGAGATTCCAGAATTTTTGGAATCTTTTCCGTCAAGAAACTTGAGCTTGGGAAGGCACGCGTCAACCAAGTAAGTAGTCATTTGGATTCCCATGAGCAATACTTGTAGGAACCGCTTGGAATAAGCATGCATGCTATCATACCCATGAACTTAGCTAGTCGAACCTAGCATATTAGTATGAAAACCATGGAAATGAAATGAATACGAAAAAGCTAGATATGAAATGATTATGTCATCTGTTTAGATTGAGATTCTGATAATGTATGTATGCATGAGGAGGATGGAAAACTTGTGAAATCTGCGCTCCAGGTGAAGATGGACGTTATCTCTCCGTTGAGCACGTTTGTTAATATTGCATGAACTGCTACTTGTTAACATTAGTGCATAAATGCTTGTGTTATCTTTCTTGTTGAATAGGAAGAAAATATGAGCTGAGATTAGAGTGCTTGTGACTAAGTAGGCTAGACGAGACCCTAGATTAGGAGACCTCTAGAATATCGTACATTTAGACCCACGAAACGATTACCAGCGGATCCAAAACCCAGAATTCCAAACCACGACAGGTTTATGAGATCCTGCACAAGAATCCTAGAGATGAATGAATTCAGGTCTAAGCAACCAAGAGTCTGCCCTAGAAAGACTAGTAGGACACCATGGTAACTGTAGGTAGCCCGCTAGAGTTGAGCAGTGTGGATAGTGTCACTAGAACCTTCCCTTCCCTTTCTGCTCCGATACCATATCGTCGAGATAGAGATCTAGTACAAAGATTGTTGAGCCAGGAAGATCTAGATAGGGAAGTGTGACAGGTGCCCCGACCTAGTGGTGATAGCTAAGGGGTCTTCTGAACAAGACTCTTGGGTCGTTGAAACCCGTCCCTGAGCGGGGGAACGTACAACCACATAGGATGACTTAGTAGCTGATCGGCACACCGGGGATCGTAACTCCCAATTTTAGTGGATGTATGGTCTCGTGGGAGGGTTGTCAGCTAACCTCCACGGATGATGTTCAGGCAGAGTTCTTATTTAGATCCAGGCATACGATCCCCTCAAATTTACTTGTGAGGTCACACCTCACCTCAGGACACTGATCATTCCACTGCATAAGATGGGCAAGCCTCCTAAAATACAGAAAAGAGGGTTGTAACATGATTCACACTCACTAAAACCCAGAGATAAGACCATGGATACAATACCTATTAAGATAAGGATGCGAAAAGAGCCTACAAAGTAGGTTGCTTACTGAGTATATTTTTAAACTCACCCCTTTTTTCCTTTTTTTTTTTTCAGGTACCATACGATATGGGGAGGTGTTCGAGAGCTGCACTGTCACAGCCTTTGCTCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGACGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGAACAAGTAAGAAAATTTCTCGTTGAGTTACGTACTTACGTAAAAACGAATAAACCTCAGTTTCAAGAAATAATATCTTACACCAAGACATTCACCTCTGAAGCGGAAGCCCTTTTGAAAGAAGCTATTCAGGAATAGATGGAACGTTTTCTACTTCAAGACCAAGTATAAAAGAAAACAAGTAAAGTATAAATAACAGGAACAGATGGAACGTTTTCTACTTCAAGACCAAGTATAAAAGAAAACAAGTAAAGTATAAATAAATTTTATAACTTGAAAATGTTATAATTTAAACATGAAATAATTTCATTCTTTTCATTTATTAGGTAGAATATATAATTTTTAGAAAATACTAAATATAAATATATATAAATATATTAAAGAAAGTAAATAATATTTCTAGAAATATATATCAATATTAAAATGAAATGTAAATACAATTAAGAAATTTTTTACTAAAATAGTTAAAAGAGTTAAAAGAGTTAAAAGTCAAAATTAGATTCTATTTCTAAGAATATATTCAGAATTGAGTGAGCAAGCATTGGCGATAAAGAAATTGATGAAATATTAGATCGATTCGGTCGATTCTTCTTAGGCTAATGAGAATAGGCTCAGGCTCTGTACGGCTTATTTAGTCTTTTTTGATAGCGCCCTGTTAAGTGTTATTAGAGAAATTCCAGTCTTAAGCAGCCAATTTTTTCTAGTATAGTCGACATTGGATAACCATTCCATTATTTGTTCTGGGGCTCGTATAAGGCTTCGGTGACATGAAATCCAAGAGATTCTTTGATTATCCTTTCATGTTCTCTTTAATGAGGTCGCCTCATATTTTCTTTAACCTAATTAATCAGCGAGCCCTGGGGGAGAATGGTGATGGAGATGTATTGCGGCCTTCTCCTGTTCATCAACTCTCACCTCATTCTTCTGCAGTTGATGTTACGGATCCACTCTTCAGGCCAGTAGCTTTGCGCAGCATCTTCTGCCGATTGCCAGCCTGTTGTGTTGACCTCAGAGGATTCCAGTCACCCGACACAGCATCTTTCTTCTCGGCGATCACATTGTTTATATCATATACAAAAGTGGGTCACATCCATAGTGTCTCCAGGATAAGGTACTCAGCTTTATCCTTGTACTATAGATCATTTTGA

mRNA sequence

ATGGATGGAGAGGGAGCCACGCTCCCTGGAGCAAGAGATGAAGACGACGTTGAAGCTGGAGTAGTCGCCACAGAGGGTGAAGGAGCTGATTTTGGCGAGGAGGCCGACGACGACTTGGTTGGCGAAGAGGCCAGTACCATACGATATGGGGAGGTGTTCGAGAGCTGCACTGTCACAGCCTTTGCTCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGACGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGAACAACGAGCCCTGGGGGAGAATGGTGATGGAGATGTATTGCGGCCTTCTCCTGTTCATCAACTCTCACCTCATTCTTCTGCAGTTGATGTTACGGATCCACTCTTCAGGCCAGTAGCTTTGCGCAGCATCTTCTGCCGATTGCCAGCCTGTTGTGTTGACCTCAGAGGATTCCAGTCACCCGACACAGCATCTTTCTTCTCGGCGATCACATTGTTTATATCATATACAAAAGTGGGTCACATCCATAGTGTCTCCAGGATAAGGTACTCAGCTTTATCCTTGTACTATAGATCATTTTGA

Coding sequence (CDS)

ATGGATGGAGAGGGAGCCACGCTCCCTGGAGCAAGAGATGAAGACGACGTTGAAGCTGGAGTAGTCGCCACAGAGGGTGAAGGAGCTGATTTTGGCGAGGAGGCCGACGACGACTTGGTTGGCGAAGAGGCCAGTACCATACGATATGGGGAGGTGTTCGAGAGCTGCACTGTCACAGCCTTTGCTCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGACGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGAACAACGAGCCCTGGGGGAGAATGGTGATGGAGATGTATTGCGGCCTTCTCCTGTTCATCAACTCTCACCTCATTCTTCTGCAGTTGATGTTACGGATCCACTCTTCAGGCCAGTAGCTTTGCGCAGCATCTTCTGCCGATTGCCAGCCTGTTGTGTTGACCTCAGAGGATTCCAGTCACCCGACACAGCATCTTTCTTCTCGGCGATCACATTGTTTATATCATATACAAAAGTGGGTCACATCCATAGTGTCTCCAGGATAAGGTACTCAGCTTTATCCTTGTACTATAGATCATTTTGA
Homology
[Close]
BLAST of CmoCh17G005520 vs. Swiss-Prot
Match: ATPA_CUCSA (ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus GN=atpA PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24
Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMT+YTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTVYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEI Q
Sbjct: 446 LDSLEIAQ 453

[Close]
BLAST of CmoCh17G005520 vs. Swiss-Prot
Match: ATPA_CARPA (ATP synthase subunit alpha, chloroplastic OS=Carica papaya GN=atpA PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 58/68 (85.29%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEI Q
Sbjct: 446 LDSLEIGQ 453

[Close]
BLAST of CmoCh17G005520 vs. Swiss-Prot
Match: ATPA_NICTO (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tomentosiformis GN=atpA PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLE+ Q
Sbjct: 446 LDSLEVGQ 453

[Close]
BLAST of CmoCh17G005520 vs. Swiss-Prot
Match: ATPA_TOBAC (ATP synthase subunit alpha, chloroplastic OS=Nicotiana tabacum GN=atpA PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLE+ Q
Sbjct: 446 LDSLEVGQ 453

[Close]
BLAST of CmoCh17G005520 vs. Swiss-Prot
Match: ATPA_SOLTU (ATP synthase subunit alpha, chloroplastic OS=Solanum tuberosum GN=atpA PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23
Identity = 57/68 (83.82%), Postives = 62/68 (91.18%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLE+ Q
Sbjct: 446 LDSLEVGQ 453

[Close]
BLAST of CmoCh17G005520 vs. TrEMBL
Match: A0A0S2IGT0_CUCPE (ATP synthase subunit alpha OS=Cucurbita pepo subsp. ovifera GN=atpA PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. TrEMBL
Match: A0A0S2IH79_CUCPE (ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna GN=atpA PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. TrEMBL
Match: A0A0S2IGB0_9ROSI (ATP synthase subunit alpha OS=Cucurbita lundelliana GN=atpA PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. TrEMBL
Match: A0A0S2IE22_9ROSI (ATP synthase subunit alpha OS=Cucurbita argyrosperma GN=atpA PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. TrEMBL
Match: A0A0S2IFP7_9ROSI (ATP synthase subunit alpha OS=Cucurbita okeechobeensis GN=atpA PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. TAIR10
Match: ATCG00120.1 (ATCG00120.1 ATP synthase subunit alpha)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AF+QF+SDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFSQFSSDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LD LEI Q
Sbjct: 446 LDGLEIGQ 453

[Close]
BLAST of CmoCh17G005520 vs. TAIR10
Match: AT2G07698.1 (AT2G07698.1 ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 1 

Query: 58  VTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGYLDSLEIE 117
           V AFAQF SDLD ATQ  L RG RL E+ KQ Q APL +++QI+ IY   NG+ D + ++
Sbjct: 673 VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLD 732

Query: 118 QRALGENGDGDVLRPSPVHQL 139
           + +  E    + ++P  +  L
Sbjct: 733 RISQYEKAIPNSVKPELLQAL 753

[Close]
BLAST of CmoCh17G005520 vs. TAIR10
Match: ATMG01190.1 (ATMG01190.1 ATP synthase subunit 1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 1 

Query: 58  VTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGYLDSLEIE 117
           V AFAQF SDLD ATQ  L RG RL E+ KQ Q APL +++QI+ IY   NG+ D + ++
Sbjct: 403 VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPLD 462

Query: 118 QRALGENGDGDVLRPSPVHQL 139
           + +  E    + ++P  +  L
Sbjct: 463 RISQYEKAIPNSVKPELLQAL 483

[Close]
BLAST of CmoCh17G005520 vs. NCBI nr
Match: gi|952954897|gb|ALO22253.1| (AtpA (plastid) [Cucurbita lundelliana])

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. NCBI nr
Match: gi|952954380|gb|ALO21744.1| (AtpA (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. NCBI nr
Match: gi|952955021|gb|ALO22375.1| (AtpA (plastid) [Cucurbita moschata])

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY
Sbjct: 386 ELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. NCBI nr
Match: gi|408899379|gb|AFU94515.1| (AtpA, partial (chloroplast) [Caloncoba echinata])

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

[Close]
BLAST of CmoCh17G005520 vs. NCBI nr
Match: gi|568244719|ref|YP_008963465.1| (ATP synthase CF1 alpha subunit (chloroplast) [Penthorum chinense])

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 1 

Query: 51  EVFESCTVTAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVDEQIMTIYTGTNGY 110
           E+ +   + AFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTV+EQIMTIYTGTNGY
Sbjct: 386 ELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGY 445

Query: 111 LDSLEIEQ 119
           LDSLEIEQ
Sbjct: 446 LDSLEIEQ 453

The following BLAST results are available for this feature:
BLAST of CmoCh17G005520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPA_CUCSA5.9e-2485.29ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus GN=atpA PE=3 SV=1[more]
ATPA_CARPA1.7e-2385.29ATP synthase subunit alpha, chloroplastic OS=Carica papaya GN=atpA PE=3 SV=1[more]
ATPA_NICTO2.3e-2383.82ATP synthase subunit alpha, chloroplastic OS=Nicotiana tomentosiformis GN=atpA P... [more]
ATPA_TOBAC2.3e-2383.82ATP synthase subunit alpha, chloroplastic OS=Nicotiana tabacum GN=atpA PE=2 SV=2[more]
ATPA_SOLTU2.3e-2383.82ATP synthase subunit alpha, chloroplastic OS=Solanum tuberosum GN=atpA PE=3 SV=1[more]
BLAST of CmoCh17G005520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S2IGT0_CUCPE1.3e-2288.24ATP synthase subunit alpha OS=Cucurbita pepo subsp. ovifera GN=atpA PE=3 SV=1[more]
A0A0S2IH79_CUCPE1.3e-2288.24ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna GN=atpA PE=3 SV=1[more]
A0A0S2IGB0_9ROSI1.3e-2288.24ATP synthase subunit alpha OS=Cucurbita lundelliana GN=atpA PE=3 SV=1[more]
A0A0S2IE22_9ROSI1.3e-2288.24ATP synthase subunit alpha OS=Cucurbita argyrosperma GN=atpA PE=3 SV=1[more]
A0A0S2IFP7_9ROSI1.3e-2288.24ATP synthase subunit alpha OS=Cucurbita okeechobeensis GN=atpA PE=3 SV=1[more]
BLAST of CmoCh17G005520 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00120.11.4e-2380.88ATCG00120.1 ATP synthase subunit alpha[more]
AT2G07698.14.7e-1143.21 ATPase, F1 complex, alpha subunit protein[more]
ATMG01190.14.7e-1143.21ATMG01190.1 ATP synthase subunit 1[more]
BLAST of CmoCh17G005520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|952954897|gb|ALO22253.1|1.9e-2288.24AtpA (plastid) [Cucurbita lundelliana][more]
gi|952954380|gb|ALO21744.1|1.9e-2288.24AtpA (plastid) [Cucurbita argyrosperma][more]
gi|952955021|gb|ALO22375.1|1.9e-2288.24AtpA (plastid) [Cucurbita moschata][more]
gi|408899379|gb|AFU94515.1|4.3e-2286.76AtpA, partial (chloroplast) [Caloncoba echinata][more]
gi|568244719|ref|YP_008963465.1|4.3e-2286.76ATP synthase CF1 alpha subunit (chloroplast) [Penthorum chinense][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000793ATP_synth_asu_C
Vocabulary: Molecular Function
TermDefinition
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
Vocabulary: Cellular Component
TermDefinition
GO:0033178proton-transporting two-sector ATPase complex, catalytic domain
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G005520.1CmoCh17G005520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalPFAMPF00306ATP-synt_ab_Ccoord: 59..118
score: 1.8
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalunknownSSF47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 58..118
score: 2.3
NoneNo IPR availableGENE3DG3DSA:1.20.150.20coord: 58..118
score: 2.0
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 60..118
score: 3.2
NoneNo IPR availablePANTHERPTHR15184:SF42ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 60..118
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G005520Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G005520Cucurbita pepo (Zucchini)cmocpeB354
CmoCh17G005520Cucumber (Gy14) v2cgybcmoB739
CmoCh17G005520Silver-seed gourdcarcmoB0117
CmoCh17G005520Silver-seed gourdcarcmoB0306
CmoCh17G005520Cucumber (Chinese Long) v3cmocucB0438
CmoCh17G005520Watermelon (97103) v2cmowmbB368
CmoCh17G005520Wax gourdcmowgoB0483
CmoCh17G005520Cucurbita moschata (Rifu)cmocmoB323
CmoCh17G005520Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G005520Cucurbita maxima (Rimu)cmacmoB900
CmoCh17G005520Wild cucumber (PI 183967)cmocpiB366
CmoCh17G005520Cucumber (Chinese Long) v2cmocuB364
CmoCh17G005520Watermelon (97103) v1cmowmB346