CmoCh17G005340 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCGTTTCAGATCTCAAAAAAGTGAGGAATTTGTTTTGATTTAAATTCTCCTATTTGAAGGTTCTGACTCAGTTCATAATGAGCAGGTTGATCGAATTCTGTATTCATCAGTGGTCTATCCACATAATTATGGCTTCATCCCCCGTACACTGTGCGAAGACAATGATCCTATGGATGTTCTAGTACTTATGCAGGTTATACTCTGAACATTGCTCATTCAGTTGATATTCTTCTCAAACTGATCTTATAACGTAATCAAATAAATTTTGGTATTGCACTACAATCTCTCTAGTAAGAGGCAAACTGAATATTTCTGAAAATCCTAGAATGCAAGACATCACAATTTGGTTCCAACCTTTGGATTAGCCGAAAAGACATCCAAGAAATTTTGGACTCTGCCTTTGTGTTGCTGTTTTTTCTTACCTGCAGCAAGTTTTAGCTTCATTCACTGTGGCAATTTACAAAAAGTCCATTGATTTGTTTGTTTAGGAACCAGTTCTTCCTGGCTGTTTTCTCCGAGCCAAGGCCATTGGACTAATGCCCATGATTGACCAGGTACTTTTGAAGCAATGGAAACAAACAAAGCCTACTTTGTTCTCTCATTCGAATAATTTAACAAAATTGTTGCTTTTGATCCAGGGAGAGAAGGATGATAAGATCATTGCAGTCTGTGCTGATGATCCAGAATACAAGCATTACAACGACATCAAAGAGCTTCCCCCTCACCGTCTCTCTGAGATTCGTCGCTTCTTCGAAGACTGTATCCTTTCAAATCTAATTACGAAATCCAGATTATTGTTCTTGGGCCCGACATACATGTCTGCAAATTTCTTAACATAAGTGAATCACAGATAAAAAGAATGAAAACAAGGAGGTAGCAGTTAATGACTTCTTACATTCAGGCGTTGCTCTTGAAGCTATCCAGTACTCAATGTAAGTCTTTCAATCAGATCCAATGAATTTTACATTCTGGTTTAGTTTCAATATTTGTTCTTACAAGATTTTAAATTTTGACTAAATTTGCAGGGATCTTTATGCTGAGTACATTCTGCACACCCTGAGGCGATAAACCGACGCAATTCACCCCGCCGATCACCTTAATAAAAGGCGGTTGTAACGATTATATTTCAAACAAACATGTTCTGTTGTAACGTGGGACTAGTTTCCTTTTCTCTTTTCTTTTTGAATTCAAATTTTTGGTTATCTGATAGATGAATACCACGTCAAGGTTTGAGCTGTTTATTTTTTTGTTTTCGTTTATGAATCTGATCAACATATTGAATGAACACTCTATATTTCTCTTAACAATTTTGATCGAAAATGGTTATTTATCCATTTACCATTTTATCTGATTTAAATAAAGTTGGCC ATGAAGCGTTTCAGATCTCAAAAAAGTTCTGACTCAGTTCATAATGAGCAGGTTGATCGAATTCTGTATTCATCAGTGGTCTATCCACATAATTATGGCTTCATCCCCCGTACACTGTGCGAAGACAATGATCCTATGGATGTTCTAGTACTTATGCAGGAACCAGTTCTTCCTGGCTGTTTTCTCCGAGCCAAGGCCATTGGACTAATGCCCATGATTGACCAGGTACTTTTGAAGCAATGGAAACAAACAAAGCCTACTTTGTTCTCTCATTCGAATAATTTAACAAAATTGTTGCTTTTGATCCAGGGAGAGAAGGATGATAAGATCATTGCAGTCTGTGCTGATGATCCAGAATACAAGCATTACAACGACATCAAAGAGCTTCCCCCTCACCGTCTCTCTGAGATTCGTCGCTTCTTCGAAGACTATAAAAAGAATGAAAACAAGGAGGTAGCAGTTAATGACTTCTTACATTCAGGCGTTGCTCTTGAAGCTATCCAGTACTCAATGGATCTTTATGCTGAGTACATTCTGCACACCCTGAGGCGATAAACCGACGCAATTCACCCCGCCGATCACCTTAATAAAAGGCGGTTGTAACGATTATATTTCAAACAAACATGTTCTGTTGTAACGTGGGACTAGTTTCCTTTTCTCTTTTCTTTTTGAATTCAAATTTTTGGTTATCTGATAGATGAATACCACGTCAAGGTTTGAGCTGTTTATTTTTTTGTTTTCGTTTATGAATCTGATCAACATATTGAATGAACACTCTATATTTCTCTTAACAATTTTGATCGAAAATGGTTATTTATCCATTTACCATTTTATCTGATTTAAATAAAGTTGGCC ATGAAGCGTTTCAGATCTCAAAAAAGTTCTGACTCAGTTCATAATGAGCAGGTTGATCGAATTCTGTATTCATCAGTGGTCTATCCACATAATTATGGCTTCATCCCCCGTACACTGTGCGAAGACAATGATCCTATGGATGTTCTAGTACTTATGCAGGAACCAGTTCTTCCTGGCTGTTTTCTCCGAGCCAAGGCCATTGGACTAATGCCCATGATTGACCAGGTACTTTTGAAGCAATGGAAACAAACAAAGCCTACTTTGTTCTCTCATTCGAATAATTTAACAAAATTGTTGCTTTTGATCCAGGGAGAGAAGGATGATAAGATCATTGCAGTCTGTGCTGATGATCCAGAATACAAGCATTACAACGACATCAAAGAGCTTCCCCCTCACCGTCTCTCTGAGATTCGTCGCTTCTTCGAAGACTATAAAAAGAATGAAAACAAGGAGGTAGCAGTTAATGACTTCTTACATTCAGGCGTTGCTCTTGAAGCTATCCAGTACTCAATGGATCTTTATGCTGAGTACATTCTGCACACCCTGAGGCGATAA
BLAST of CmoCh17G005340 vs. Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.3e-67 Identity = 129/168 (76.79%), Postives = 135/168 (80.36%), Query Frame = 1
BLAST of CmoCh17G005340 vs. Swiss-Prot
Match: IPYR5_ARATH (Soluble inorganic pyrophosphatase 5 OS=Arabidopsis thaliana GN=PPA5 PE=2 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 3.1e-66 Identity = 126/168 (75.00%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. Swiss-Prot
Match: IPYR3_ARATH (Soluble inorganic pyrophosphatase 3 OS=Arabidopsis thaliana GN=PPA3 PE=2 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.0e-65 Identity = 127/168 (75.60%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. Swiss-Prot
Match: IPYR_SOLTU (Soluble inorganic pyrophosphatase PPA1 OS=Solanum tuberosum GN=PPA1 PE=1 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 2.9e-64 Identity = 123/168 (73.21%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. Swiss-Prot
Match: IPYR4_ARATH (Soluble inorganic pyrophosphatase 4 OS=Arabidopsis thaliana GN=PPA4 PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.2e-63 Identity = 118/168 (70.24%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TrEMBL
Match: A0A0A0KAI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095940 PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.0e-68 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TrEMBL
Match: V4U6Y6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022171mg PE=3 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 8.9e-68 Identity = 133/168 (79.17%), Postives = 137/168 (81.55%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TrEMBL
Match: W9RVW2_9ROSA (Soluble inorganic pyrophosphatase OS=Morus notabilis GN=L484_019610 PE=3 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 7.5e-67 Identity = 132/168 (78.57%), Postives = 135/168 (80.36%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TrEMBL
Match: M4F8K4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.2e-66 Identity = 130/168 (77.38%), Postives = 136/168 (80.95%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TrEMBL
Match: A0A0D3DZU7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.2e-66 Identity = 130/168 (77.38%), Postives = 136/168 (80.95%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TAIR10
Match: AT1G01050.1 (AT1G01050.1 pyrophosphorylase 1) HSP 1 Score: 257.3 bits (656), Expect = 7.2e-69 Identity = 129/168 (76.79%), Postives = 135/168 (80.36%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TAIR10
Match: AT4G01480.1 (AT4G01480.1 pyrophosphorylase 5) HSP 1 Score: 252.7 bits (644), Expect = 1.8e-67 Identity = 126/168 (75.00%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TAIR10
Match: AT2G46860.1 (AT2G46860.1 pyrophosphorylase 3) HSP 1 Score: 250.0 bits (637), Expect = 1.1e-66 Identity = 127/168 (75.60%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TAIR10
Match: AT3G53620.1 (AT3G53620.1 pyrophosphorylase 4) HSP 1 Score: 242.7 bits (618), Expect = 1.8e-64 Identity = 118/168 (70.24%), Postives = 133/168 (79.17%), Query Frame = 1
BLAST of CmoCh17G005340 vs. TAIR10
Match: AT2G18230.1 (AT2G18230.1 pyrophosphorylase 2) HSP 1 Score: 218.8 bits (556), Expect = 2.8e-57 Identity = 111/168 (66.07%), Postives = 126/168 (75.00%), Query Frame = 1
BLAST of CmoCh17G005340 vs. NCBI nr
Match: gi|449445531|ref|XP_004140526.1| (PREDICTED: soluble inorganic pyrophosphatase 1 [Cucumis sativus]) HSP 1 Score: 267.7 bits (683), Expect = 1.5e-68 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 1
BLAST of CmoCh17G005340 vs. NCBI nr
Match: gi|659119722|ref|XP_008459809.1| (PREDICTED: soluble inorganic pyrophosphatase [Cucumis melo]) HSP 1 Score: 267.7 bits (683), Expect = 1.5e-68 Identity = 136/168 (80.95%), Postives = 138/168 (82.14%), Query Frame = 1
BLAST of CmoCh17G005340 vs. NCBI nr
Match: gi|568876664|ref|XP_006491395.1| (PREDICTED: soluble inorganic pyrophosphatase 1 [Citrus sinensis]) HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67 Identity = 133/168 (79.17%), Postives = 137/168 (81.55%), Query Frame = 1
BLAST of CmoCh17G005340 vs. NCBI nr
Match: gi|567904426|ref|XP_006444701.1| (hypothetical protein CICLE_v10022171mg [Citrus clementina]) HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67 Identity = 133/168 (79.17%), Postives = 137/168 (81.55%), Query Frame = 1
BLAST of CmoCh17G005340 vs. NCBI nr
Match: gi|703140049|ref|XP_010107131.1| (Soluble inorganic pyrophosphatase [Morus notabilis]) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66 Identity = 132/168 (78.57%), Postives = 135/168 (80.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |