CmoCh17G005260 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATAAAAATTCCCACATGCAATCTGAATCTCCATTTCTTTTGCTGAGAATCATGTCAAATCCAAAAATGTTGAACAAATTTGCAGGTGTTGTTGGAAGATTTAGAGATTCATCTGGGATTGTGACCCCCCATGCTTATCATATCCCTTCATCATCTTATATCCATCAGCCCACTACTCAATACTCATACCCTCTTTCAGGATATGGGTAAGGGTTGAAACAAGAACTATAAATGATATCAACAAAATCTAATTTTACCATTTTCCTGTTCTTGATTAAAACTGTCATTTCAGGTTTGCTGGATATTCACAAGACATAATCCATCCATTGGTAGGAATCTATGTTTATATGTTTGTGTTTGTGATCTTGTTGGCATTGATTTTGGTCTGGGCGTTGTGTTTTCAATGCAGAACTATTATGGTGCTTACAGGGGCCAACAATTTTCACCTTATTACTCTGCAAATGGGATTTCAGATCAGGCTAGAATGTTTCAAAATCTCTATCCATATTATGCTCAAAGTAGCCAGGGGTACGCGTTTGGAATTCAGTATCCACACCTAATACAGTACCCGTATCTTCATCAGCAGCACGGTTTGATCGATATCCTATCGCTTCCTGGCTCGAACGCAACAAGAGCAGGTGCTAAATGAACTACAAATGCTTGTAATCTAATCCATTATTGTGTCATTTGATGTTGGGAATTGTTATCTAAAGAATGTCACTTGTTTGGGACATGTTGGTTTTGAAAGTGGTCTGGAGATTTATGTGCAAATTGTAACAGGTACAACAGCAACACCGACATGGGCAGTCGGATCTGGACCTTCACAAGCTTCTTTTGCAATAGCTTCTGAACCGAAGTCTTCGAGTTAA ATGGATCATAAAAATTCCCACATGCAATCTGAATCTCCATTTCTTTTGCTGAGAATCATGTCAAATCCAAAAATGTTGAACAAATTTGCAGGTGTTGTTGGAAGATTTAGAGATTCATCTGGGATTGTGACCCCCCATGCTTATCATATCCCTTCATCATCTTATATCCATCAGCCCACTACTCAATACTCATACCCTCTTTCAGGATATGGGTTTGCTGGATATTCACAAGACATAATCCATCCATTGGTAGGAATCTATGTTTATATGGGCCAACAATTTTCACCTTATTACTCTGCAAATGGGATTTCAGATCAGGCTAGAATGTTTCAAAATCTCTATCCATATTATGCTCAAAGTAGCCAGGGGTACGCGTTTGGAATTCAGTATCCACACCTAATACAGTACCCGTATCTTCATCAGCAGCACGGTTTGATCGATATCCTATCGCTTCCTGGCTCGAACGCAACAAGAGCAGGTACAACAGCAACACCGACATGGGCAGTCGGATCTGGACCTTCACAAGCTTCTTTTGCAATAGCTTCTGAACCGAAGTCTTCGAGTTAA ATGGATCATAAAAATTCCCACATGCAATCTGAATCTCCATTTCTTTTGCTGAGAATCATGTCAAATCCAAAAATGTTGAACAAATTTGCAGGTGTTGTTGGAAGATTTAGAGATTCATCTGGGATTGTGACCCCCCATGCTTATCATATCCCTTCATCATCTTATATCCATCAGCCCACTACTCAATACTCATACCCTCTTTCAGGATATGGGTTTGCTGGATATTCACAAGACATAATCCATCCATTGGTAGGAATCTATGTTTATATGGGCCAACAATTTTCACCTTATTACTCTGCAAATGGGATTTCAGATCAGGCTAGAATGTTTCAAAATCTCTATCCATATTATGCTCAAAGTAGCCAGGGGTACGCGTTTGGAATTCAGTATCCACACCTAATACAGTACCCGTATCTTCATCAGCAGCACGGTTTGATCGATATCCTATCGCTTCCTGGCTCGAACGCAACAAGAGCAGGTACAACAGCAACACCGACATGGGCAGTCGGATCTGGACCTTCACAAGCTTCTTTTGCAATAGCTTCTGAACCGAAGTCTTCGAGTTAA
BLAST of CmoCh17G005260 vs. TrEMBL
Match: A0A0A0K998_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087740 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57 Identity = 122/160 (76.25%), Postives = 132/160 (82.50%), Query Frame = 1
BLAST of CmoCh17G005260 vs. TrEMBL
Match: B9RNJ8_RICCO (RNA-binding region-containing protein, putative OS=Ricinus communis GN=RCOM_1339600 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31 Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = 1
BLAST of CmoCh17G005260 vs. TrEMBL
Match: A0A067K9C7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14190 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.0e-31 Identity = 87/177 (49.15%), Postives = 104/177 (58.76%), Query Frame = 1
BLAST of CmoCh17G005260 vs. TrEMBL
Match: A0A061E003_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_005042 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-30 Identity = 79/144 (54.86%), Postives = 94/144 (65.28%), Query Frame = 1
BLAST of CmoCh17G005260 vs. TrEMBL
Match: D7U825_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02630 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-30 Identity = 81/161 (50.31%), Postives = 104/161 (64.60%), Query Frame = 1
BLAST of CmoCh17G005260 vs. TAIR10
Match: AT2G46780.1 (AT2G46780.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 67.8 bits (164), Expect = 8.2e-12 Identity = 70/210 (33.33%), Postives = 93/210 (44.29%), Query Frame = 1
BLAST of CmoCh17G005260 vs. NCBI nr
Match: gi|659120078|ref|XP_008460001.1| (PREDICTED: RNA-binding protein 24-B [Cucumis melo]) HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59 Identity = 125/160 (78.12%), Postives = 134/160 (83.75%), Query Frame = 1
BLAST of CmoCh17G005260 vs. NCBI nr
Match: gi|449445662|ref|XP_004140591.1| (PREDICTED: RNA-binding protein 24 [Cucumis sativus]) HSP 1 Score: 231.1 bits (588), Expect = 1.6e-57 Identity = 122/160 (76.25%), Postives = 132/160 (82.50%), Query Frame = 1
BLAST of CmoCh17G005260 vs. NCBI nr
Match: gi|223545549|gb|EEF47053.1| (RNA-binding region-containing protein, putative [Ricinus communis]) HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31 Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = 1
BLAST of CmoCh17G005260 vs. NCBI nr
Match: gi|1000974797|ref|XP_002515069.2| (PREDICTED: RNA-binding protein 38 [Ricinus communis]) HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31 Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = 1
BLAST of CmoCh17G005260 vs. NCBI nr
Match: gi|643716793|gb|KDP28419.1| (hypothetical protein JCGZ_14190 [Jatropha curcas]) HSP 1 Score: 142.9 bits (359), Expect = 5.7e-31 Identity = 87/177 (49.15%), Postives = 104/177 (58.76%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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