CmoCh17G004650 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G004650
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCyclin-dependent protein kinase, putative
LocationCmo_Chr17 : 3302518 .. 3304006 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTTTGTACTTTGTCGCTCTAAACAACAGGCACCCATATCTTATTTCTTGATCTTCGTCCTTTTCCCTCACCTTCCACTCACCTTCCAAAATCCCCATATAAAATCCCCATTTCTTCCTTCCAACCAATACCCATTAACCCCAATGGCCCTTCCAATTTCCCCACGAAGCCTTCGCTCCGATGTGTACTCCTACTCCTACGAGGAGCGCTCGGGTACCCCTTTGGTCATCGGCGTTGTTGCGTCCTTGATCGAGAGGAGCATGGCCAGGAACCATCGGATTGCCAAGAATTGCATGTCCATGCCTAGAGATTCCAGGTCCAGGGCCCTTGTTTTTGAGTGCCGTGAGGCTCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATTTTTCGGTATACTAAAGTTGGTCCTTCTGTTTACGTTGTTGCTTATGTTTATATTGATCGGTTTTGCCAACAAAATCCTGGGTTTCGGATCAATCTTAGGAATGTTCATCGCCTTCTTATCACTACTGTCATGGTCGCTTCTAAATATGTCGAGGATATGTAAGTTTTGTTTTTCTCTCTCTCTTTTTAAAGCCTTGGATTGATTTTGGGTTGTAGAAGTAAAAGGTTTTTGTGTTAGCAAGTCTCGAAAAGTTACTTCTTTGATGATTAAGGTATCGGTGACGATCTCGAGTTTCCAAATACATTGTCATTCCATTCGGGTCGAGACCCACGAGAGCTTTTACCTATATTTTACCATTTCTCTCATTCCTTCAACGAGTGAGTCCTCGAATAAACCTGTTCAACTTTCCAACTGAGTCTCAAGTTTCGAAACACATTGTCAATCCATTCAAGTTGAGACCCACCAAAGCTTTTACCTATATTTGACCATTTCTCCCTTTTCTTTAACCAACGAGTCCTCGAATAAACTTGTTCCACGTTCTAATATTGAGTTGACCGAACAAAGGATCCCACCGACCTGATAAATCACTTCATATCGACAGGGGAGAAATTCCCGGGCTTCCCTTTGATTAAGTTGATAATGTTTATTACCTTTTGTTGATAGGTGTTCTTCTAGCTCAATCTCGATTTAACGTTACTTTTGAAAACAGGAACTATCGAAATTCGTACTATGCAAGAGTCGGGGGATTGACAACAAAGGAGATGAATCAACTGGAGCTGGATTTTTTGTTCATGATGGGATTCAAATGCCATGTAAATCTAAGTGTGTTTGAGAGTTATTGTTGCCATTTGGAGAGAGAAGTAAGCATTGGAGGAGGATACCATATAGAGAGGACATTAAGATGTGCTGAAGAGTTGAAGTCTAAACAAAGCCAACAAGCCTCATTTAATCAAATGGCTCGTATTACATTGTAAAGATCAAAGATGCTGCCTTTTTTGTATAGTTTATATGATAATATATATTAAAATGTGTTTGGTTCTTTTGAATCATTGTTTCATTTGCCGACACTTGCTTAATATATACTCATGTAATATAAAGGAC

mRNA sequence

TTCCTTTGTACTTTGTCGCTCTAAACAACAGGCACCCATATCTTATTTCTTGATCTTCGTCCTTTTCCCTCACCTTCCACTCACCTTCCAAAATCCCCATATAAAATCCCCATTTCTTCCTTCCAACCAATACCCATTAACCCCAATGGCCCTTCCAATTTCCCCACGAAGCCTTCGCTCCGATGTGTACTCCTACTCCTACGAGGAGCGCTCGGGTACCCCTTTGGTCATCGGCGTTGTTGCGTCCTTGATCGAGAGGAGCATGGCCAGGAACCATCGGATTGCCAAGAATTGCATGTCCATGCCTAGAGATTCCAGGTCCAGGGCCCTTGTTTTTGAGTGCCGTGAGGCTCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATTTTTCGGTATACTAAAGTTGGTCCTTCTGTTTACGTTGTTGCTTATGTTTATATTGATCGGTTTTGCCAACAAAATCCTGGGTTTCGGATCAATCTTAGGAATGTTCATCGCCTTCTTATCACTACTGTCATGGTCGCTTCTAAATATGTCGAGGATATGAACTATCGAAATTCGTACTATGCAAGAGTCGGGGGATTGACAACAAAGGAGATGAATCAACTGGAGCTGGATTTTTTGTTCATGATGGGATTCAAATGCCATGTAAATCTAAGTGTGTTTGAGAGTTATTGTTGCCATTTGGAGAGAGAAGTAAGCATTGGAGGAGGATACCATATAGAGAGGACATTAAGATGTGCTGAAGAGTTGAAGTCTAAACAAAGCCAACAAGCCTCATTTAATCAAATGGCTCGTATTACATTGTAAAGATCAAAGATGCTGCCTTTTTTGTATAGTTTATATGATAATATATATTAAAATGTGTTTGGTTCTTTTGAATCATTGTTTCATTTGCCGACACTTGCTTAATATATACTCATGTAATATAAAGGAC

Coding sequence (CDS)

ATGGCCCTTCCAATTTCCCCACGAAGCCTTCGCTCCGATGTGTACTCCTACTCCTACGAGGAGCGCTCGGGTACCCCTTTGGTCATCGGCGTTGTTGCGTCCTTGATCGAGAGGAGCATGGCCAGGAACCATCGGATTGCCAAGAATTGCATGTCCATGCCTAGAGATTCCAGGTCCAGGGCCCTTGTTTTTGAGTGCCGTGAGGCTCCCGACATGTCCATTCAGTGTTATTTGGAGAGGATTTTTCGGTATACTAAAGTTGGTCCTTCTGTTTACGTTGTTGCTTATGTTTATATTGATCGGTTTTGCCAACAAAATCCTGGGTTTCGGATCAATCTTAGGAATGTTCATCGCCTTCTTATCACTACTGTCATGGTCGCTTCTAAATATGTCGAGGATATGAACTATCGAAATTCGTACTATGCAAGAGTCGGGGGATTGACAACAAAGGAGATGAATCAACTGGAGCTGGATTTTTTGTTCATGATGGGATTCAAATGCCATGTAAATCTAAGTGTGTTTGAGAGTTATTGTTGCCATTTGGAGAGAGAAGTAAGCATTGGAGGAGGATACCATATAGAGAGGACATTAAGATGTGCTGAAGAGTTGAAGTCTAAACAAAGCCAACAAGCCTCATTTAATCAAATGGCTCGTATTACATTGTAA
Homology
[Close]
BLAST of CmoCh17G004650 vs. Swiss-Prot
Match: CCU22_ARATH (Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 9.9e-83
Identity = 149/226 (65.93%), Postives = 183/226 (80.97%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRA 61
           +L ISPR LRSD+YSYSY+  S TPLVI V++SLI+R++ RN RI++  +     +  + 
Sbjct: 6   SLTISPRKLRSDLYSYSYQNNSKTPLVISVLSSLIDRTLTRNERISRRALPSS-GAGGKT 65

Query: 62  LVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLI 121
            +F+CRE PDM+IQ YL RIFRYTK GPSVYVVAYVYIDRFCQ NPGFRI+L NVHRLLI
Sbjct: 66  QIFDCREIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLI 125

Query: 122 TTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHL 181
           TT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LEL+FLF+MGFK HVN+SVFESYCCHL
Sbjct: 126 TTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHL 185

Query: 182 EREVSIGGGYHIERTLRCAEELKSKQ------SQQASFNQMARITL 222
           EREVS GGGY IE+ LRCAEE+KS+Q            +Q+ARI L
Sbjct: 186 EREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

[Close]
BLAST of CmoCh17G004650 vs. Swiss-Prot
Match: CCU21_ARATH (Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.9e-82
Identity = 149/210 (70.95%), Postives = 178/210 (84.76%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGT-PLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSR 61
           +L ISPR LRSD+YSYSY++ S T PLVI V++SLIER++ARN RI+++          +
Sbjct: 3   SLAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGF-----GK 62

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+CRE PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ N GFRI+L NVHRLL
Sbjct: 63  TRVFDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLL 122

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+M+ASKYVEDMNY+NSY+A+VGGL T+++N LEL+FLF+MGFK HVN+SVFESYCCH
Sbjct: 123 ITTIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCH 182

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQ 211
           LEREVSIGGGY IE+ LRCAEE+KS+Q  Q
Sbjct: 183 LEREVSIGGGYQIEKALRCAEEIKSRQIVQ 207

[Close]
BLAST of CmoCh17G004650 vs. Swiss-Prot
Match: CCP21_ORYSJ (Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.7e-47
Identity = 102/211 (48.34%), Postives = 138/211 (65.40%), Query Frame = 1 

Query: 10  LRSDVYSYSYEERS----GTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRALVFE 69
           L SDVY+    +       TP+V+ V+ASL+ER +ARN R      +   ++  RA  F+
Sbjct: 6   LASDVYALPCGDDGTTALSTPVVVSVLASLLERHIARNER--DQAAAADGEAARRARAFD 65

Query: 70  CREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLITTVM 129
                DMS+  +LER  RY  V P VYVVAY Y+DR  ++  G R+   N  RLL T ++
Sbjct: 66  SGTVLDMSLHAFLERFSRYANVSPQVYVVAYAYLDRL-RRGDGVRVVSANAQRLLTTAIL 125

Query: 130 VASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLEREV 189
           VASK+VED NY+NSY+A VGGLT  E++ LELDFLF+M F+ +V++SVF+SYC HLEREV
Sbjct: 126 VASKFVEDRNYKNSYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLEREV 185

Query: 190 SIGGGYHIERTLR----CAEELKSKQSQQAS 213
           S GGGY +ER L+    C+ E +++Q Q AS
Sbjct: 186 SYGGGYQVERCLKKALVCSGEAQAQQRQAAS 213

[Close]
BLAST of CmoCh17G004650 vs. Swiss-Prot
Match: CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 74/190 (38.95%), Postives = 121/190 (63.68%), Query Frame = 1 

Query: 23  SGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRALVFECREAPDMSIQCYLERIF 82
           + TP V+ +++ ++E+ +ARN  +AK      +   +    F    AP +SI  YLERI+
Sbjct: 22  AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEA----FHGVRAPSISIAKYLERIY 81

Query: 83  RYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLITTVMVASKYVEDMNYRNSYYA 142
           +YTK  P+ +VV YVYIDR   ++PG  +   NVHRLL+T VM+A+K ++D++Y N +YA
Sbjct: 82  KYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYA 141

Query: 143 RVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLEREVSIGGGYHIERTLRCAEE 202
           RVGG++  ++N++EL+ LF++ F+  V+  VFESYC HLE+E+ +       + ++  +E
Sbjct: 142 RVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQE 201

Query: 203 LKSKQSQQAS 213
             S  S  +S
Sbjct: 202 SLSPASTLSS 207

[Close]
BLAST of CmoCh17G004650 vs. Swiss-Prot
Match: CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 74/160 (46.25%), Postives = 112/160 (70.00%), Query Frame = 1 

Query: 28  VIGVVASLIERSMARNHRIAKNCMSMPRDSRSRALVFECREAPDMSIQCYLERIFRYTKV 87
           +I  ++SL+ER +A ++ + +   +  +    R  VF     P ++IQ YLERIF+Y   
Sbjct: 13  LIAFLSSLLER-VAESNDLTRRVATQSQ----RVSVFHGLSRPTITIQSYLERIFKYANC 72

Query: 88  GPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGL 147
            PS +VVAYVY+DRF  + P   IN  NVHRLLIT+VMVA+K+++D+ Y N+YYA+VGG+
Sbjct: 73  SPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGI 132

Query: 148 TTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLEREVSI 188
           +TKEMN LELDFLF +GF+ +V  + F +Y  +L++E+++
Sbjct: 133 STKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]
BLAST of CmoCh17G004650 vs. TrEMBL
Match: A0A0A0KAQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108560 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.6e-95
Identity = 183/224 (81.70%), Postives = 197/224 (87.95%), Query Frame = 1 

Query: 1   MALPISPRSLRSDVYSYSY-EERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRS 60
           M +PISPR LRSD+YSYS+ E+ S  PLVI VVASLIER+MARNHRIA+N  S       
Sbjct: 8   MIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSS-----K 67

Query: 61  RALVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHR 120
            A+VF+CR EAPDMSIQCYLERIFRYTK  P VYVVAYVYIDRFCQQNP FRI LRNVHR
Sbjct: 68  GAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHR 127

Query: 121 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYC 180
           LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYC
Sbjct: 128 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYC 187

Query: 181 CHLEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 222
           CHLEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 188 CHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]
BLAST of CmoCh17G004650 vs. TrEMBL
Match: A0A061DUC4_THECC (Cyclin p3,2 OS=Theobroma cacao GN=TCM_005606 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.5e-93
Identity = 171/221 (77.38%), Postives = 194/221 (87.78%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSD+Y YSY+  + TPLVI V+ASLIER+M RN RIAKNC  S+ +D RSR
Sbjct: 6   SLTISPRKLRSDLYCYSYQNDANTPLVISVLASLIERTMTRNERIAKNCKWSLTKDYRSR 65

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+C E PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ NPGFRIN RNVHRLL
Sbjct: 66  --VFDCHETPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQANPGFRINARNVHRLL 125

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+MVASKYVEDMNYRNSY+ARVGGLTT E+N LEL+FLF+MGFK HVN+SVFESYCCH
Sbjct: 126 ITTIMVASKYVEDMNYRNSYFARVGGLTTNELNNLELEFLFLMGFKLHVNVSVFESYCCH 185

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREVSIGGGYHIERTLRCAEE+KS+Q+++  +NQ+ARI L
Sbjct: 186 LEREVSIGGGYHIERTLRCAEEIKSRQNEERRYNQIARIML 224

[Close]
BLAST of CmoCh17G004650 vs. TrEMBL
Match: A0A067H161_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041949mg PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.1e-92
Identity = 171/221 (77.38%), Postives = 194/221 (87.78%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSDVYSYSYE  S TPLVI V+ASLIER+MARN RIA+NC  ++ +DSRSR
Sbjct: 7   SLVISPRKLRSDVYSYSYENDSNTPLVISVLASLIERTMARNERIARNCRRALSKDSRSR 66

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+  E PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ NPGFRI+  NVHRLL
Sbjct: 67  --VFDSHEIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQANPGFRIHATNVHRLL 126

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+MVASKYVED+NYRNSY+ARVGGL T E+N+LELDFLF+MGFK HVN+SVFESYCCH
Sbjct: 127 ITTIMVASKYVEDLNYRNSYFARVGGLETNELNKLELDFLFLMGFKMHVNVSVFESYCCH 186

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREVSIGGGYHIERTLRCAEE+KS+Q++   FN +AR+TL
Sbjct: 187 LEREVSIGGGYHIERTLRCAEEIKSRQTEDRIFNHIARLTL 225

[Close]
BLAST of CmoCh17G004650 vs. TrEMBL
Match: V4U8P2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024289mg PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.1e-92
Identity = 171/221 (77.38%), Postives = 194/221 (87.78%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSDVYSYSYE  S TPLVI V+ASLIER+MARN RIA+NC  ++ +DSRSR
Sbjct: 7   SLVISPRKLRSDVYSYSYENDSNTPLVISVLASLIERTMARNERIARNCRRALSKDSRSR 66

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+  E PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ NPGFRI+  NVHRLL
Sbjct: 67  --VFDSHEIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQANPGFRIHATNVHRLL 126

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+MVASKYVED+NYRNSY+ARVGGL T E+N+LELDFLF+MGFK HVN+SVFESYCCH
Sbjct: 127 ITTIMVASKYVEDLNYRNSYFARVGGLETNELNKLELDFLFLMGFKMHVNVSVFESYCCH 186

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREVSIGGGYHIERTLRCAEE+KS+Q++   FN +AR+TL
Sbjct: 187 LEREVSIGGGYHIERTLRCAEEIKSRQTEDRIFNHIARLTL 225

[Close]
BLAST of CmoCh17G004650 vs. TrEMBL
Match: B9GPB8_POPTR (Cyclin family protein OS=Populus trichocarpa GN=POPTR_0002s14440g PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.1e-91
Identity = 165/221 (74.66%), Postives = 193/221 (87.33%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSD+YSYSY+  S TPLVI V+ASLIER+MARN RI KNC  ++ +D R+R
Sbjct: 5   SLAISPRKLRSDLYSYSYQNDSNTPLVISVLASLIERTMARNERIVKNCTWALSKDIRTR 64

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+C E PD++IQ YLER+FRYT+ GPSVYVVAYVYIDRFCQ NPGFRIN RNVHRLL
Sbjct: 65  --VFDCHETPDLTIQSYLERVFRYTRAGPSVYVVAYVYIDRFCQANPGFRINSRNVHRLL 124

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+MVASKYVEDMNYRNSY+ARVGGLTT E+N+LEL+F+F+MGFK HVN+SVFESYCCH
Sbjct: 125 ITTIMVASKYVEDMNYRNSYFARVGGLTTNELNKLELEFVFLMGFKLHVNVSVFESYCCH 184

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREV IGGGYHIE+TLRCAEE+KS Q ++  +NQ+ARI L
Sbjct: 185 LEREVGIGGGYHIEKTLRCAEEIKSGQQEEKRYNQIARIML 223

[Close]
BLAST of CmoCh17G004650 vs. TAIR10
Match: AT3G60550.1 (AT3G60550.1 cyclin p3;2)

HSP 1 Score: 307.8 bits (787), Expect = 5.6e-84
Identity = 149/226 (65.93%), Postives = 183/226 (80.97%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRA 61
           +L ISPR LRSD+YSYSY+  S TPLVI V++SLI+R++ RN RI++  +     +  + 
Sbjct: 6   SLTISPRKLRSDLYSYSYQNNSKTPLVISVLSSLIDRTLTRNERISRRALPSS-GAGGKT 65

Query: 62  LVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLI 121
            +F+CRE PDM+IQ YL RIFRYTK GPSVYVVAYVYIDRFCQ NPGFRI+L NVHRLLI
Sbjct: 66  QIFDCREIPDMTIQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLI 125

Query: 122 TTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHL 181
           TT+M+ASKYVED+NYRNSY+A+VGGL T+++N+LEL+FLF+MGFK HVN+SVFESYCCHL
Sbjct: 126 TTIMIASKYVEDLNYRNSYFAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHL 185

Query: 182 EREVSIGGGYHIERTLRCAEELKSKQ------SQQASFNQMARITL 222
           EREVS GGGY IE+ LRCAEE+KS+Q            +Q+ARI L
Sbjct: 186 EREVSFGGGYQIEKALRCAEEIKSRQMIIQDPKHHHHHHQLARILL 230

[Close]
BLAST of CmoCh17G004650 vs. TAIR10
Match: AT2G45080.1 (AT2G45080.1 cyclin p3;1)

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-83
Identity = 149/210 (70.95%), Postives = 178/210 (84.76%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGT-PLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSR 61
           +L ISPR LRSD+YSYSY++ S T PLVI V++SLIER++ARN RI+++          +
Sbjct: 3   SLAISPRKLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGF-----GK 62

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+CRE PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ N GFRI+L NVHRLL
Sbjct: 63  TRVFDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLL 122

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+M+ASKYVEDMNY+NSY+A+VGGL T+++N LEL+FLF+MGFK HVN+SVFESYCCH
Sbjct: 123 ITTIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCH 182

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQ 211
           LEREVSIGGGY IE+ LRCAEE+KS+Q  Q
Sbjct: 183 LEREVSIGGGYQIEKALRCAEEIKSRQIVQ 207

[Close]
BLAST of CmoCh17G004650 vs. TAIR10
Match: AT3G21870.1 (AT3G21870.1 cyclin p2;1)

HSP 1 Score: 151.4 bits (381), Expect = 6.7e-37
Identity = 74/190 (38.95%), Postives = 121/190 (63.68%), Query Frame = 1 

Query: 23  SGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRALVFECREAPDMSIQCYLERIF 82
           + TP V+ +++ ++E+ +ARN  +AK      +   +    F    AP +SI  YLERI+
Sbjct: 22  AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEA----FHGVRAPSISIAKYLERIY 81

Query: 83  RYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLITTVMVASKYVEDMNYRNSYYA 142
           +YTK  P+ +VV YVYIDR   ++PG  +   NVHRLL+T VM+A+K ++D++Y N +YA
Sbjct: 82  KYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYA 141

Query: 143 RVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLEREVSIGGGYHIERTLRCAEE 202
           RVGG++  ++N++EL+ LF++ F+  V+  VFESYC HLE+E+ +       + ++  +E
Sbjct: 142 RVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQE 201

Query: 203 LKSKQSQQAS 213
             S  S  +S
Sbjct: 202 SLSPASTLSS 207

[Close]
BLAST of CmoCh17G004650 vs. TAIR10
Match: AT2G44740.1 (AT2G44740.1 cyclin p4;1)

HSP 1 Score: 147.9 bits (372), Expect = 7.4e-36
Identity = 74/160 (46.25%), Postives = 112/160 (70.00%), Query Frame = 1 

Query: 28  VIGVVASLIERSMARNHRIAKNCMSMPRDSRSRALVFECREAPDMSIQCYLERIFRYTKV 87
           +I  ++SL+ER +A ++ + +   +  +    R  VF     P ++IQ YLERIF+Y   
Sbjct: 13  LIAFLSSLLER-VAESNDLTRRVATQSQ----RVSVFHGLSRPTITIQSYLERIFKYANC 72

Query: 88  GPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLITTVMVASKYVEDMNYRNSYYARVGGL 147
            PS +VVAYVY+DRF  + P   IN  NVHRLLIT+VMVA+K+++D+ Y N+YYA+VGG+
Sbjct: 73  SPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGI 132

Query: 148 TTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLEREVSI 188
           +TKEMN LELDFLF +GF+ +V  + F +Y  +L++E+++
Sbjct: 133 STKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTL 167

[Close]
BLAST of CmoCh17G004650 vs. TAIR10
Match: AT5G07450.1 (AT5G07450.1 cyclin p4;3)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-35
Identity = 71/160 (44.38%), Postives = 107/160 (66.88%), Query Frame = 1 

Query: 26  PLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRALVFECREAPDMSIQCYLERIFRYT 85
           P VI  ++SL++R    N     + +S P     R   F     P +SI+ Y+ERIF+Y 
Sbjct: 21  PNVITAMSSLLQRVSETN-----DDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYA 80

Query: 86  KVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLLITTVMVASKYVEDMNYRNSYYARVG 145
               S Y+VAY+Y+DRF Q+ P   I+  NVHRL+IT+V+V++K+++D+ Y N++YA+VG
Sbjct: 81  DCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVG 140

Query: 146 GLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCHLEREV 186
           G+TT+EMN LELDFLF +GF+ +V +S +  YC  L+RE+
Sbjct: 141 GITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREM 175

[Close]
BLAST of CmoCh17G004650 vs. NCBI nr
Match: gi|449445463|ref|XP_004140492.1| (PREDICTED: cyclin-U2-1 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 6.6e-95
Identity = 183/224 (81.70%), Postives = 197/224 (87.95%), Query Frame = 1 

Query: 1   MALPISPRSLRSDVYSYSY-EERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRS 60
           M +PISPR LRSD+YSYS+ E+ S  PLVI VVASLIER+MARNHRIA+N  S       
Sbjct: 8   MIIPISPRKLRSDLYSYSHSEDYSKIPLVISVVASLIERNMARNHRIARNYTSS-----K 67

Query: 61  RALVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHR 120
            A+VF+CR EAPDMSIQCYLERIFRYTK  P VYVVAYVYIDRFCQQNP FRI LRNVHR
Sbjct: 68  GAVVFDCRDEAPDMSIQCYLERIFRYTKAAPCVYVVAYVYIDRFCQQNPSFRITLRNVHR 127

Query: 121 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYC 180
           LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYC
Sbjct: 128 LLITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMRFKCHVNLSVFESYC 187

Query: 181 CHLEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 222
           CHLEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 188 CHLEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 226

[Close]
BLAST of CmoCh17G004650 vs. NCBI nr
Match: gi|659119569|ref|XP_008459728.1| (PREDICTED: cyclin-U2-1 [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 6.6e-95
Identity = 184/222 (82.88%), Postives = 197/222 (88.74%), Query Frame = 1 

Query: 3   LPISPRSLRSDVYSYSY-EERSGTPLVIGVVASLIERSMARNHRIAKNCMSMPRDSRSRA 62
           +PISPR LRSD+YSYSY E+ S  PLVI VVASLIER+MARNHRIA+N MS        A
Sbjct: 81  IPISPRKLRSDLYSYSYSEDYSKIPLVISVVASLIERNMARNHRIARNYMSS-----KGA 140

Query: 63  LVFECR-EAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 122
           +VF+CR EAPDMSIQ YLERIFRYTK  PSVYVVAYVYIDRFCQQNP FRI LRNVHRLL
Sbjct: 141 VVFDCRDEAPDMSIQRYLERIFRYTKAAPSVYVVAYVYIDRFCQQNPSFRITLRNVHRLL 200

Query: 123 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 182
           ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLE+DFLF+M FKCHVNLSVFESYCCH
Sbjct: 201 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLEMDFLFLMKFKCHVNLSVFESYCCH 260

Query: 183 LEREVSIGGGYHIERTLRCAEELKSKQSQQASF-NQMARITL 222
           LEREVSIGGGYHIERTLRCAEELKSKQ+QQ ++ NQ+ARI L
Sbjct: 261 LEREVSIGGGYHIERTLRCAEELKSKQNQQTTYINQIARIML 297

[Close]
BLAST of CmoCh17G004650 vs. NCBI nr
Match: gi|590723418|ref|XP_007052178.1| (Cyclin p3,2 [Theobroma cacao])

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 171/221 (77.38%), Postives = 194/221 (87.78%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSD+Y YSY+  + TPLVI V+ASLIER+M RN RIAKNC  S+ +D RSR
Sbjct: 6   SLTISPRKLRSDLYCYSYQNDANTPLVISVLASLIERTMTRNERIAKNCKWSLTKDYRSR 65

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+C E PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ NPGFRIN RNVHRLL
Sbjct: 66  --VFDCHETPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQANPGFRINARNVHRLL 125

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+MVASKYVEDMNYRNSY+ARVGGLTT E+N LEL+FLF+MGFK HVN+SVFESYCCH
Sbjct: 126 ITTIMVASKYVEDMNYRNSYFARVGGLTTNELNNLELEFLFLMGFKLHVNVSVFESYCCH 185

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREVSIGGGYHIERTLRCAEE+KS+Q+++  +NQ+ARI L
Sbjct: 186 LEREVSIGGGYHIERTLRCAEEIKSRQNEERRYNQIARIML 224

[Close]
BLAST of CmoCh17G004650 vs. NCBI nr
Match: gi|567905686|ref|XP_006445331.1| (hypothetical protein CICLE_v10024289mg [Citrus clementina])

HSP 1 Score: 346.7 bits (888), Expect = 3.1e-92
Identity = 171/221 (77.38%), Postives = 194/221 (87.78%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSDVYSYSYE  S TPLVI V+ASLIER+MARN RIA+NC  ++ +DSRSR
Sbjct: 7   SLVISPRKLRSDVYSYSYENDSNTPLVISVLASLIERTMARNERIARNCRRALSKDSRSR 66

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+  E PDM+IQ YLERIFRYTK GPSVYVVAYVYIDRFCQ NPGFRI+  NVHRLL
Sbjct: 67  --VFDSHEIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQANPGFRIHATNVHRLL 126

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           ITT+MVASKYVED+NYRNSY+ARVGGL T E+N+LELDFLF+MGFK HVN+SVFESYCCH
Sbjct: 127 ITTIMVASKYVEDLNYRNSYFARVGGLETNELNKLELDFLFLMGFKMHVNVSVFESYCCH 186

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREVSIGGGYHIERTLRCAEE+KS+Q++   FN +AR+TL
Sbjct: 187 LEREVSIGGGYHIERTLRCAEEIKSRQTEDRIFNHIARLTL 225

[Close]
BLAST of CmoCh17G004650 vs. NCBI nr
Match: gi|743804798|ref|XP_011017452.1| (PREDICTED: cyclin-U2-1-like [Populus euphratica])

HSP 1 Score: 343.6 bits (880), Expect = 2.6e-91
Identity = 166/221 (75.11%), Postives = 192/221 (86.88%), Query Frame = 1 

Query: 2   ALPISPRSLRSDVYSYSYEERSGTPLVIGVVASLIERSMARNHRIAKNCM-SMPRDSRSR 61
           +L ISPR LRSD+YSYSY+  S TPLVI V+ASLIER+MARN RI KNC  ++ +D R+R
Sbjct: 5   SLAISPRKLRSDLYSYSYQNDSNTPLVISVLASLIERTMARNERIVKNCKWALSKDIRTR 64

Query: 62  ALVFECREAPDMSIQCYLERIFRYTKVGPSVYVVAYVYIDRFCQQNPGFRINLRNVHRLL 121
             VF+C E PD++IQ YLERIFRYT+ GPSVYVVAYVYIDRFCQ NPGFRIN RNVHRLL
Sbjct: 65  --VFDCHETPDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQANPGFRINSRNVHRLL 124

Query: 122 ITTVMVASKYVEDMNYRNSYYARVGGLTTKEMNQLELDFLFMMGFKCHVNLSVFESYCCH 181
           +TT+MVASKYVEDMNYRNSY+ARVGGLTT E+N LEL+F+F+MGFK HVN+SVFESYCCH
Sbjct: 125 VTTIMVASKYVEDMNYRNSYFARVGGLTTNELNNLELEFVFLMGFKLHVNVSVFESYCCH 184

Query: 182 LEREVSIGGGYHIERTLRCAEELKSKQSQQASFNQMARITL 222
           LEREV IGGGYHIERTLRCAEE+KS Q ++  +NQ+ARI L
Sbjct: 185 LEREVGIGGGYHIERTLRCAEEIKSGQQEEKRYNQIARIML 223

The following BLAST results are available for this feature:
BLAST of CmoCh17G004650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCU22_ARATH9.9e-8365.93Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1[more]
CCU21_ARATH4.9e-8270.95Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1[more]
CCP21_ORYSJ8.7e-4748.34Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1[more]
CCU11_ARATH1.2e-3538.95Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1[more]
CCU41_ARATH1.3e-3446.25Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1[more]
BLAST of CmoCh17G004650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAQ9_CUCSA4.6e-9581.70Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108560 PE=4 SV=1[more]
A0A061DUC4_THECC1.5e-9377.38Cyclin p3,2 OS=Theobroma cacao GN=TCM_005606 PE=4 SV=1[more]
A0A067H161_CITSI2.1e-9277.38Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041949mg PE=4 SV=1[more]
V4U8P2_9ROSI2.1e-9277.38Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024289mg PE=4 SV=1[more]
B9GPB8_POPTR3.1e-9174.66Cyclin family protein OS=Populus trichocarpa GN=POPTR_0002s14440g PE=4 SV=1[more]
BLAST of CmoCh17G004650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G60550.15.6e-8465.93 cyclin p3;2[more]
AT2G45080.12.8e-8370.95 cyclin p3;1[more]
AT3G21870.16.7e-3738.95 cyclin p2;1[more]
AT2G44740.17.4e-3646.25 cyclin p4;1[more]
AT5G07450.12.1e-3544.38 cyclin p4;3[more]
BLAST of CmoCh17G004650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445463|ref|XP_004140492.1|6.6e-9581.70PREDICTED: cyclin-U2-1 [Cucumis sativus][more]
gi|659119569|ref|XP_008459728.1|6.6e-9582.88PREDICTED: cyclin-U2-1 [Cucumis melo][more]
gi|590723418|ref|XP_007052178.1|2.1e-9377.38Cyclin p3,2 [Theobroma cacao][more]
gi|567905686|ref|XP_006445331.1|3.1e-9277.38hypothetical protein CICLE_v10024289mg [Citrus clementina][more]
gi|743804798|ref|XP_011017452.1|2.6e-9175.11PREDICTED: cyclin-U2-1-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012389Cyclin_P/U
IPR013763Cyclin-like
IPR013922Cyclin_PHO80-like
Vocabulary: Biological Process
TermDefinition
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Molecular Function
TermDefinition
GO:0019901protein kinase binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0019901 protein kinase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G004650.1CmoCh17G004650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012389Cyclin P/UPIRPIRSF027110PREGcoord: 4..220
score: 2.6
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 84..166
score: 1.
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 77..166
score: 9.45
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 56..166
score: 6.3
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 2..216
score: 4.4E
NoneNo IPR availablePANTHERPTHR15615:SF15CYCLIN-U2-1-RELATEDcoord: 2..216
score: 4.4E