CmoCh17G004510 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G004510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Autophagy-related protein
Location	Cmo_Chr17 : 3081456 .. 3086506 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTTTCGTAAAATTGTCAAACTTTGTTTTTTTGAAAAAAAAAAAATGATTACAAAAAATAGGTGGAAGCTTTGAACAGAAGCTGAGTCATCCCGTGATCATCCCGTCTTATCTGATTGCCATTAAAAGAGCGTACAAATTCCAATTCACTTTTGTCAACACACAACTTTTTGATAATTTCAACAGATTAGCATCGCAATTCCCGTCTTCATCTCATTTTCTCTCAATTTTTCGCTTTTGATTTTTTCGCTTGCTTGCTGGAGATACAGATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTATCAGGTTCGTATTTCTTTACCGATGATTCGATTTTGTGTTTAATCTTAGTTGACTAAATTCGTGGATTGTTGGCTTGATCGATTACTATTCCGAACTTGGAGATATTGCGCTACTTGTCTTTGTTTTATTTCTGTTCTATGCTTCAATTCCTAAAATAGTGGTTTATGGTATTCATTATTGTCTTAAAATTTGTGATTCCAGCTTCGGTCTATGATTTTTATTGGTTCAGTTATGAATATAATATGGATTACGACTGATTGTTAGTTCAATCTCTCTCTCTCAGTTTTTCGTGACTATAATGTCGACGAGCTCGTTCAAGCAAGAGCATGATTTTGGTATATTCTTGAGCTTTCTTATGGAATCCTGTATTTTTATTAGTTTTTCAAACTAGAATCATCTTTGATTTGTTCTGATTCTTTGATTTGTTCATTTTTCTGCAGAAAAGAGACACGCTGAGGCTGCTCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAAGATTTATGACTTTTCTTGAGCTTTATTTTTTTTGTTGTTCTGGATATATATTTTCAAATTGGATATTCATGCTTTGTATGTACTGAAATTGGGGTCATTTGACCTTTGACTGCGCAATATATCATTCTTTGTCTCTCAGTTTATATGTATTTATGTGTGAGTATTTATAATCATGTCAAATGATATTTTTCTCCGAACAGATCAAAACAATTTCACGATTGCTATTAATGGCTTATGCTTATTGACTCTCTTTCCTATCCATTCCTGGCATATTCCATTTATGAACATTGCTTGTTTGACCTCTCTTAATATCTTAAGCGTAACATCTGTCCGGAAAGAAGAGCTATGTAATACATAAATTTTGGTTGTAAAGTAGAGATTAGTTGTCGATACTATTTCTATCTCGACTTGTTGAGCATGCATGTTTAGATGCTATATATAGTACGTCTTGCTATGGAAAATTTTCATTGATGGTGTCACCGTATTGATTACTGTATTACTATCTTTCACCCGGTGAATTTTTATGATTTCATTCCTGCTCACCCAATTTGTTTTTTCAAATATGAGATAGTTGACAGTGAGAAATTAGTGAAAGGGGATCCAGTTATGCAAGGATCTTCTTTCCTGTTTCTATATTCTTATGTATTATTGTTATTATTATAGTATTATTAATCTTTTTTTATTATTAAAGAAATCAACCTTTCATTGATAAACATGAAAAAAAACAACAACCCAATGAGGAATCCAAACAACAACAGACCTGTCAAAAAGAAAAAAGAAAAAAAAAAAGAAAAAGAAAAAAGCTCCCATCTGAAAGAATGAAAGCTTGAGGGCAATTGCAAGAGTCCTTAGTTATATAAGCCCGAAGTCAATGAGCAGTTGTTGCTAAAGAATAGTATATTTACTGAAACTTTCTTTATCTTCAATTACATATGCATGCCAATCAAAATGTTCATGATATAAACAGTACTACTACACGTTTTTATTTTTCATGCCGTTCTGGGATGCATTCTTTATTTTTCAAATTTGTCTCATGTCGTTATGGTTTCATGTTTTCTTCTTGTTATTATCATTCTCTTTTGTGTTGATCAGGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAAAAAAAGTAAGAAGAATTTACTTTTAGCAGTTTTACTTCAGTTTCTTTACATTTCTTATTAACAAATGATAAAAAAGAAAAAAAAGAAAAAAGAAAGTTTCTTAACATTGAAGCGTTTTCATTTTATAGACAAACTTACTCTCTTATTCATAAGTGCTTCTTCTGCATCTCATATTTCTTCCTCCCTCCCATTTCTTTTTCCATAGTCCTTTAATGGGAGTAATGCTGGTTATGTAATTAGGACAGTATAATTGTAGAAAGATGCTGATAACTCTTGTCGACCTTCCAAGCTGTGCATCGATTGAATGGTTTAGGAATTTATTTTTCTCATTTCTTGCACTGTAATTGCAACAAGGCTTTGGTTGCAGCTTTAATGTCCAATGTTTAGTGCTTGATTTTCAAACTTAACTAAGAGAGGTTTTTAGTTTCTTAATAACCTGAATACAATTTTTTTGCAGGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAATTCGTTTATGTTATCCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATATTCGTGGACAATGTGCTACCGCCAACAGGTTAATCACCCTTTTTCTTTTTAGGTCAAGATCTGTTGAAAACGGTAAATCAGGATCGTTCTGTTTAATATGATGGATAATCTTTCGTAATTTTTTCTTAATATCTTTACCTAGAAGCATAAAATTAATTAATAGATGAGATCCATGAATTGTCCCGATTCATTTAACGTCATTCTCAGTCTTGACCGTTGTTTCTATGGTATTGTTATAATCCTATTTATCATTTTATTAGGCAAGTTATGTCATAACCAATTGGTTCTAACTTTAATGGTTGTGTATCTATTTAGTCCTTAAAACTCCATTTTTTTAAAATTCATTTTCATTCTATTAAGTTCTCATCGTTAGTATCGTTATTTAAATATTTTCACATTGCGGATTAATGTGTTGATGACTGATGATGAATTGGTGAAACATGACACAAATGAGTTACAAGTTGGATTAAAGTAAGGCAAGAAGGCCCAAAAAAAAAAAAAAAAAACAAATAGTTGGCAGGTGAAATTCATTTTTAACTCAATCTTTTGATCTGCCTATCATTCTTTTACCCAATTGGCACACTACCTTGTGCCACTTTTGTTATGGAGGATGTAAGGAGCAGACAGGATTTGGGGTGTGAGAATGCCACGCTCAAAACACACTGAACAGAGGCCAACGTTGTATATATGGATTGTCAACATGTGCGTGATGTTTAAGGGGAAACTATACACAATAAATGAGCTGGAAAATACTAAAAATGCGTATATTCTCTCAGCTGTAACGTGGGTTTCTTACTGTCATAGGTTTTAGATGTCAAGTATTTCTGTAGTCTAGGAGTTGTTTCTCAGATTTTTGTATTTAAGCATTGGAAACCAATGGAAAAGGAACGGACATTTGGGTTCCTTGGGACTCAATTTCAAAAGTCTAGACTCCCTCCAATAAACCTACTATCTTTGCTTACTTTAGTGACAGCCATCTCTTCTTTGCTGTATACACGACGCAGAGTTTTTGTATCGACACTTTCAAACGAGAGACATCAGAAACATCTCTAATTATTGACTTCATGCTTCTGATTTTACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATGTTACGTACAGTGGAGAGAACACATTTGGGTGACACCCACAAAAGTATGCAGTTTCCTGCTCTCTCTCCTTGTTTATTATTGTCTTTATCAGTCTCCCACAACCCATTGTTAATCTTTGTTGCTGTTTGTGCCAAACGTATGCCAAATCGCGTCTGTAAATAAATTGTATAGTCGATGACAGACTTCTTATATATATATATATATCCTCTGATAAACTTTGAGGCCATAGTCATTATTTCAACTTGTAATCCAGTTGAATTGTACCTAATGAAGTGCTAAAAGTTGTAAACTCTAAAGCTTTGATGGCCTTGATTCAGATTTGAAGTTCGAAATGAACATATTGAACTGATCAAACCAGATTGAAGTTAGGAATTAATTATCTCAACTAAGTTGTATATATTGGACAGGCTCTCTTCGTTGCTTACTGCGTTGGTTTATTTCCTTTTTTTTCCCTCTTGGAAAAGATGAGTAATCCAACGAAAAGCTTTTGAAGAGTGAAACTGTGGTATCTAATGTGGATCTCTGAAGTTAATGTATTTTTTTTTGTTAAGCATATAAAATGTTATCAATCCAGAGAGCTGGATAGGCGGCAAATTTATCTTTCTTTTTAAGGAACCTCTCCTTTGATGTAATATTGTCTATTTTGAGTACAAGTTAGAGTAGTTTTGTTTTTGGTTTTTCCAAATGGTCTCATACTAGTGGCGGTGGGATAGTGTCACATATAAACTCATGATTTTCCTTTTAATTAGTTAAGGTGGGATTACCCTTTTCAATAATTCTCAACGATCTTCCTCTCGAACAACTACACCATAAAACTTCATCGGAGGCCTTCTTTGGAGCTTTCGAATAAAGTACACCCTTTGTTCAAAGCCTCTCCAGAGGCCTTCTCTGGAGCTCTCGAACAAAATATACTCATTGTTCAGAGCCTCCCTTGATGCCTTCTTTGGAGCTCTCGAACGAAGTGCACCATTTGTTCGACACTTGAGTCATCTTTGACTATATCCTCGAGATTCACAACTTCTTTGTTCAACACAGGAGGTCTTCTTTGGACCTCTCGAACAACCTCTCCTTAATTGAGGCTCACAATTTCTTTGTTTGATACTTAAGAATTCTAAATCTTGACAATAATATAATATTGTTCACTTTAGAGCTAGAATAAACTCGGATGACTTTGCTTCTGGTTTTCCCAACAAGCCTAATAGCAATAAACAATGCTTCTTACTTACAACTCTTGATCTTGATTTTACATGGTGCAAGTTGATTTGAAATTTATTGTTTGTAGTAAACCAGGGGTAGCTAGAGATTAAATTCCTGCCATGTTCCTCTCATGTTTTTATCTTTATTTTTAATTTTTTTTATACAGTGCTGTGTATATATGTATATTTAA

mRNA sequence

ATGGGCATTTTCATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTATCAGTTTTTCGTGACTATAATGTCGACGAGCTCGTTCAAGCAAGAGCATGATTTTGAAAAGAGACACGCTGAGGCTGCTCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAAAAAAAGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAATTCGTTTATGTTATCCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATATTCGTGGACAATGTGCTACCGCCAACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATTGCTGTGTATATATGTATATTTAA

Coding sequence (CDS)

ATGGGCATTTTCATTTCAGCCAAGAAATCGAACGAAACTTCAGTTTTGGTCTCCTCCTTCCCTGCCGGCGACTATCAGTTTTTCGTGACTATAATGTCGACGAGCTCGTTCAAGCAAGAGCATGATTTTGAAAAGAGACACGCTGAGGCTGCTCGGATTAGAGAGAAGTACCCAGACAGAATTCCAGTAATTGTGGAGAAGGCAGAGAGAAGTGATATTCCCAACATTGACAAAAAAAAGTATTTAGTGCCTGCTGACCTGACTGTTGGTCAATTCGTTTATGTTATCCGGAAGAGAATAAAACTGAGTGCAGAAAAAGCAATTTTCATATTCGTGGACAATGTGCTACCGCCAACAGGGTCTCTCATGTCTGCAATCTACGATGAGAGGAAGGATGAGGATGGCTTTCTCTATTGCTGTGTATATATGTATATTTAA

Homology

[Close]

BLAST of CmoCh17G004510 vs. Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.0e-48
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPP G+LMS++Y+E+KD+DGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           MS  SF+Q+HDFEKR AEA RIREKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRI+LSAEKAIFIFVDNVLPPTG++MS IYDE K+EDGFLY
Sbjct: 61  FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=1 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-45
Identity = 88/104 (84.62%), Postives = 99/104 (95.19%), Query Frame = 1


Query: 35  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVY 94
           S FK ++DFEKR AEA RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVY
Sbjct: 5   SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 95  VIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           VIRKRIKLSAEKAIFIFVDNVLPPTG LMS++Y+++KDEDGFLY
Sbjct: 65  VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLY 108

[Close]

BLAST of CmoCh17G004510 vs. Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-45
Identity = 91/107 (85.05%), Postives = 97/107 (90.65%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFK EH  E+R AEA RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYV+RKRIKLSAEKAIFIFV N LPPT +LMSAIY+E KDEDGFLY
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-45
Identity = 91/107 (85.05%), Postives = 97/107 (90.65%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFK EH  E+R AEA RIREKYPDRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYV+RKRIKLSAEKAIFIFV N LPPT +LMSAIY+E KDEDGFLY
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TrEMBL
Match: A0A0A0KFQ8_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_6G109660 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.0e-52
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           MSTSSFKQEH+FEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MSTSSFKQEHEFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TrEMBL
Match: A0A059C3X7_EUCGR (Autophagy-related protein OS=Eucalyptus grandis GN=EUGRSUZ_E01504 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.5e-49
Identity = 100/107 (93.46%), Postives = 104/107 (97.20%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ S FKQEHDFEKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MNKSVFKQEHDFEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MSAIYDE+KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TrEMBL
Match: B9GPC9_POPTR (Autophagy-related protein OS=Populus trichocarpa GN=POPTR_0002s14540g PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.5e-49
Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHDFEKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MTKSSFKQEHDFEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MS IYDE KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDENKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TrEMBL
Match: A0A0K9RSJ8_SPIOL (Autophagy-related protein OS=Spinacia oleracea GN=SOVF_034070 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 99/107 (92.52%), Postives = 104/107 (97.20%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MSAIY+E+KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TrEMBL
Match: A0A068UN21_COFCA (Autophagy-related protein OS=Coffea canephora GN=GSCOC_T00030444001 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 99/107 (92.52%), Postives = 103/107 (96.26%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHDFEKR AEAARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDFEKRRAEAARIREKYPDRIPVIVEKAEKSDIPGIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG +MSAIYDE+KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGGIMSAIYDEKKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TAIR10
Match: AT4G16520.1 (AT4G16520.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-49
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAE+SDIP IDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPP G+LMS++Y+E+KD+DGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TAIR10
Match: AT3G60640.1 (AT3G60640.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 186.8 bits (473), Expect = 9.4e-48
Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           MS  SF+Q+HDFEKR AEA RIREKY DR+PVIVEK+E+SDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRI+LSAEKAIFIFVDNVLPPTG++MS IYDE K+EDGFLY
Sbjct: 61  FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. TAIR10
Match: AT2G45170.1 (AT2G45170.1 AUTOPHAGY 8E)

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-46
Identity = 88/104 (84.62%), Postives = 99/104 (95.19%), Query Frame = 1


Query: 35  SSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQFVY 94
           S FK ++DFEKR AEA RIREKYPDRIPVIVEKAE+S++PNIDKKKYLVP+DLTVGQFVY
Sbjct: 5   SIFKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVY 64

Query: 95  VIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           VIRKRIKLSAEKAIFIFVDNVLPPTG LMS++Y+++KDEDGFLY
Sbjct: 65  VIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLY 108

[Close]

BLAST of CmoCh17G004510 vs. TAIR10
Match: AT1G62040.2 (AT1G62040.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 5.1e-46
Identity = 87/107 (81.31%), Postives = 97/107 (90.65%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFK EH  E+R  E++RIREKYPDRIPVIVE+AERSD+PNIDKKKYLVPADLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYV+RKRIKLSAEKAIF+FV N LPPT ++MSAIYDE KDEDGFLY
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLY 121

[Close]

BLAST of CmoCh17G004510 vs. TAIR10
Match: AT4G21980.2 (AT4G21980.2 Ubiquitin-like superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 7.7e-42
Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFK  +  E R +E++RIREKYPDRIPVIVEKA +SD+P+IDKKKYLVPADLTVGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYV+RKRIKL AEKAIF+FV N LPPT +LMSAIY+E KDEDGFLY
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLY 122

[Close]

BLAST of CmoCh17G004510 vs. NCBI nr
Match: gi|659116560|ref|XP_008458134.1| (PREDICTED: autophagy-related protein 8f [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 3.5e-52
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. NCBI nr
Match: gi|778712265|ref|XP_011656871.1| (PREDICTED: autophagy-related protein 8f [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           MSTSSFKQEH+FEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MSTSSFKQEHEFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. NCBI nr
Match: gi|702341137|ref|XP_010056366.1| (PREDICTED: autophagy-related protein 8f-like [Eucalyptus grandis])

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-48
Identity = 100/107 (93.46%), Postives = 104/107 (97.20%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ S FKQEHDFEKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MNKSVFKQEHDFEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MSAIYDE+KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. NCBI nr
Match: gi|224067661|ref|XP_002302521.1| (hypothetical protein POPTR_0002s14540g [Populus trichocarpa])

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-48
Identity = 100/107 (93.46%), Postives = 103/107 (96.26%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHDFEKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MTKSSFKQEHDFEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MS IYDE KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDENKDEDGFLY 107

[Close]

BLAST of CmoCh17G004510 vs. NCBI nr
Match: gi|902231902|gb|KNA22438.1| (hypothetical protein SOVF_034070 [Spinacia oleracea])

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-48
Identity = 99/107 (92.52%), Postives = 104/107 (97.20%), Query Frame = 1


Query: 32  MSTSSFKQEHDFEKRHAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 91
           M+ SSFKQEHD EKR AEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60

Query: 92  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGSLMSAIYDERKDEDGFLY 139
           FVYVIRKRIKLSAEKAIFIFVDNVLPPTG++MSAIY+E+KDEDGFLY
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLY 107

The following BLAST results are available for this feature:

BLAST of CmoCh17G004510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG8F_ARATH	4.0e-48	87.85	Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=1 SV=1	[more]
ATG8G_ARATH	1.7e-46	85.05	Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1	[more]
ATG8E_ARATH	1.8e-45	84.62	Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=1 SV=2	[more]
ATG8C_ORYSI	5.4e-45	85.05	Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2	[more]
ATG8C_ORYSJ	5.4e-45	85.05	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1	[more]

BLAST of CmoCh17G004510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFQ8_CUCSA	7.0e-52	99.07	Autophagy-related protein OS=Cucumis sativus GN=Csa_6G109660 PE=3 SV=1	[more]
A0A059C3X7_EUCGR	9.5e-49	93.46	Autophagy-related protein OS=Eucalyptus grandis GN=EUGRSUZ_E01504 PE=3 SV=1	[more]
B9GPC9_POPTR	9.5e-49	93.46	Autophagy-related protein OS=Populus trichocarpa GN=POPTR_0002s14540g PE=3 SV=1	[more]
A0A0K9RSJ8_SPIOL	2.8e-48	92.52	Autophagy-related protein OS=Spinacia oleracea GN=SOVF_034070 PE=3 SV=1	[more]
A0A068UN21_COFCA	2.8e-48	92.52	Autophagy-related protein OS=Coffea canephora GN=GSCOC_T00030444001 PE=3 SV=1	[more]

BLAST of CmoCh17G004510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16520.1	2.2e-49	87.85	Ubiquitin-like superfamily protein	[more]
AT3G60640.1	9.4e-48	85.05	Ubiquitin-like superfamily protein	[more]
AT2G45170.1	1.0e-46	84.62	AUTOPHAGY 8E	[more]
AT1G62040.2	5.1e-46	81.31	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	7.7e-42	76.64	Ubiquitin-like superfamily protein	[more]

BLAST of CmoCh17G004510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116560\|ref\|XP_008458134.1\|	3.5e-52	100.00	PREDICTED: autophagy-related protein 8f [Cucumis melo]	[more]
gi\|778712265\|ref\|XP_011656871.1\|	1.0e-51	99.07	PREDICTED: autophagy-related protein 8f [Cucumis sativus]	[more]
gi\|702341137\|ref\|XP_010056366.1\|	1.4e-48	93.46	PREDICTED: autophagy-related protein 8f-like [Eucalyptus grandis]	[more]
gi\|224067661\|ref\|XP_002302521.1\|	1.4e-48	93.46	hypothetical protein POPTR_0002s14540g [Populus trichocarpa]	[more]
gi\|902231902\|gb\|KNA22438.1\|	4.0e-48	92.52	hypothetical protein SOVF_034070 [Spinacia oleracea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004241	Atg8-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004510.1	CmoCh17G004510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 31..138 score: 7.0
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 45..140 score: 6.3
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 33..140 score: 2.9
None	No IPR available	PANTHER	PTHR10969:SF31	AUTOPHAGY-RELATED PROTEIN 8G	coord: 31..138 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G004510	Cucsa.120580	Cucumber (Gy14) v1	cgycmoB0292
CmoCh17G004510	Cla006662	Watermelon (97103) v1	cmowmB346
CmoCh17G004510	Csa6G109660	Cucumber (Chinese Long) v2	cmocuB369
CmoCh17G004510	MELO3C021148	Melon (DHL92) v3.5.1	cmomeB306
CmoCh17G004510	ClCG06G003100	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G004510	CSPI06G08840	Wild cucumber (PI 183967)	cmocpiB372
CmoCh17G004510	Lsi09G016260	Bottle gourd (USVL1VR-Ls)	cmolsiB320
CmoCh17G004510	MELO3C021148.2	Melon (DHL92) v3.6.1	cmomedB351
CmoCh17G004510	CsaV3_6G009210	Cucumber (Chinese Long) v3	cmocucB0444
CmoCh17G004510	Cla97C06G112490	Watermelon (97103) v2	cmowmbB361
CmoCh17G004510	Bhi12G001902	Wax gourd	cmowgoB0455
CmoCh17G004510	CsGy6G008980	Cucumber (Gy14) v2	cgybcmoB744
CmoCh17G004510	Carg26706	Silver-seed gourd	carcmoB0759

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G004510	Silver-seed gourd	carcmoB0819
CmoCh17G004510	Cucurbita moschata (Rifu)	cmocmoB321
CmoCh17G004510	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G004510	Cucurbita maxima (Rimu)	cmacmoB898
CmoCh17G004510	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G004510	Cucurbita pepo (Zucchini)	cmocpeB341